Diff of /MITgcm_contrib/arctic/cs_18km/readme.txt

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--- MITgcm_contrib/arctic/cs_18km/readme.txt	2014/05/31 16:46:58	1.2
+++ MITgcm_contrib/arctic/cs_18km/readme.txt	2015/08/10 18:54:21	1.3
@@ -1,8 +1,49 @@
+update input/data from run/input
+copy run_template_cube81/runoff1p2472-360x180x12.bin to skylla
+
+DM 9-Jul-2015
+Instructions for running the Nguyen et al 2011 configuration
+with checkpoint65m (2015/06/15) on pleiades
+
+-> get a copy of ftp://ecco2.jpl.nasa.gov/data6/arctic/run_template_cube81
+   also available on pfe:/nobackup/dmenemen/arctic18km/run_template_cube81
+   and harbor.mit.edu:/net/nares/raid8/ecco-shared/arctic18km/run_template_cube81
+
+-> get a copy of ftp://ecco2.jpl.nasa.gov/data2/data/atmos/jra25
+   also available on pfe:/nobackup/hzhang1/forcing/jra25
+
+cvs co MITgcm_contrib/arctic/cs_18km
+cvs co -r checkpoint65m MITgcm_code
+cd MITgcm
+mkdir build run
+cd build
+module purge
+module load comp-intel/2015.0.090 mpi-sgi/mpt.2.11r13 netcdf/4.0
+../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas -mods ../../MITgcm_contrib/arctic/cs_18km/code
+make depend
+make -j 16
+
+cd ../run
+cp ../../MITgcm_contrib/arctic/cs_18km/input/* .
+rm data.obcs_*
+ln -sf ../../run_template_cube81/*.bin .
+ln -sf ../../run_template_cube81/BATHY_cube81_420x384_arctic .
+ln -sf ../../run_template_cube81/WOA05_* .
+ln -sf ../../run_template_cube81/*cube81 .
+ln -sf ../../run_template_cube81/+ob1979_2014_merge/* .
+ln -sf ../../jra25/jra25_*_199[1-9] .
+ln -sf ../../jra25/jra25_*_2* .
+rm jra25_rain_n*
+ln -sf ../build/mitgcmuv .
+qsub run_arctic_cs_18km_nas
+
+===============
+
 ATN 23-Dec-2013
 
 SEAICE_OPTIONS.h_atn_May2011: Paper: Nguyen et al 2011
 
-CPP_OPTIONS.h_oldcode_before2012: code similar to what is used in Nguyen et al 2011, but compatible with codes around Sep2011
+Cpp_OPTIONS.h_oldcode_before2012: code similar to what is used in Nguyen et al 2011, but compatible with codes around Sep2011
 SEAICE_OPTIONS.h_Ian_Sep2011: Equivalence to above but updated to be compatible with Ian's code on that date
 
 After 2011, pkg/seaice has updated significantly with the merge of Ian's code into the main branch.
@@ -22,4 +63,3 @@
 1) original from Nguyen et al 2011: BATHY_cube81_420x384_arctic
 2) an updated version to blank out some CAA passages (set bathymetry to zero)
   because 18km can not resolve these passages resutling in excessive sea ice thickness
-