/[MITgcm]/MITgcm_contrib/MPMice/arctic36km/readme.txt
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revision 1.1 by dimitri, Mon Nov 11 19:07:01 2013 UTC revision 1.3 by dimitri, Thu Nov 14 00:05:53 2013 UTC
# Line 1  Line 1 
1  Instructions for running arctic/cs_36km on spiral.math.unm.edu  # Instructions for getting MITgcm code and data files
   
2  mkdir Arctic36km  mkdir Arctic36km
3  cd Arctic36km  cd Arctic36km
4  cvs co MITgcm_code  cvs co MITgcm_code
# Line 7  cvs co MITgcm_contrib/MPMice Line 6  cvs co MITgcm_contrib/MPMice
6  cvs co MITgcm_contrib/arctic/cs_36km  cvs co MITgcm_contrib/arctic/cs_36km
7  ln -sf /homes/dmenemen/atmos/jra25 .  ln -sf /homes/dmenemen/atmos/jra25 .
8  ln -sf /homes/dmenemen/Arctic36km/run_template .  ln -sf /homes/dmenemen/Arctic36km/run_template .
   
9  mpd&  mpd&
10    
11    ############
12    
13    # Instructions for running uncoupled MITgcm
14    # arctic/cs_36km on spiral.math.unm.edu
15  cd MITgcm  cd MITgcm
16  mkdir bin exe  mkdir bin exe
17  cd bin  cd bin
# Line 17  cd bin Line 20  cd bin
20  ../tools/genmake2 -mpi -of ../../MITgcm_contrib/MPMice/beaufort/code/linux_gfortran_spiral  ../tools/genmake2 -mpi -of ../../MITgcm_contrib/MPMice/beaufort/code/linux_gfortran_spiral
21  make depend  make depend
22  make -j  make -j
   
23  cd ../exe  cd ../exe
24  \ln -sf ../../jra25/* .  \ln -sf ../../jra25/* .
25  \ln -sf ../../run_template/* .  \ln -sf ../../run_template/* .
26  \cp ../../MITgcm_contrib/arctic/cs_36km/input/* .  \cp ../../MITgcm_contrib/arctic/cs_36km/input/* .
27  \cp ../bin/mitgcmuv .  \cp ../bin/mitgcmuv .
28  mpiexec -np 4 ./mitgcmuv < /dev/null &> output.txt &  mpiexec -np 4 ./mitgcmuv < /dev/null &> output.txt &
29    
30    ######################
31    
32    # Instructions for running coupled MPMice/MITgcm
33    # arctic/cs_36km on spiral.math.unm.edu
34    cd MITgcm
35    mkdir bin
36    cd bin
37    \rm *
38    \cp ../../MITgcm_contrib/MPMice/beaufort/code/* .
39    \cp ../../MITgcm_contrib/arctic/cs_36km/code/* .
40    \cp ../../MITgcm_contrib/MPMice/arctic36km/code/SIZE.h .
41    \mv CPP_EEOPTIONS.h_CPL CPP_EEOPTIONS.h
42    ../tools/genmake2 -mpi -of ../../MITgcm_contrib/MPMice/beaufort/code/linux_gfortran_spiral
43    make depend
44    make -j
45    cd ..
46    mkdir ice
47    \cp /homes/hantran/fullArctic/MITgcm/ice/pm2geometry pm2input landmask .
48    \ln -sf /homes/hantran/2PM2/bin/PM2-Pre .
49    PM2-Pre
50    cd ..
51    \ln -sf /homes/hantran/2PM2/bin/PM2 .
52    mkdir ocean
53    cd ocean
54    \rm *
55    \ln -sf ../../jra25/* .
56    \ln -sf ../../run_template/* .
57    \cp ../../MITgcm_contrib/arctic/cs_36km/input/* .
58    cd ..
59    \ln -sf bin/mitgcmuv .
60    mpiexec -np 4 mitgcmuv : -np 1 PM2
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