11 |
|
|
12 |
testoutput_for_prop() |
testoutput_for_prop() |
13 |
{ |
{ |
14 |
# testoutput_for_prop dir s1 label |
# testoutput_for_prop dir s1 label subdir |
15 |
# |
# |
16 |
# compares files in $dir/input/output.txt and $dir/results.output.txt |
# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
17 |
# using search strings s1 and text label |
# using search strings s1 and text label |
18 |
|
|
19 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
20 |
echo testoutput_for_prop: grep "$2" $1/input/output.txt 1>&2 |
echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
21 |
fi |
fi |
22 |
if [ -r $1/input/output.txt ]; then |
if [ -r $1/$4/output.txt ]; then |
23 |
grep "$2" $1/input/output.txt | sed 's/.*=//' | nl > tmp1.txt |
grep "$2" $1/$4/output.txt | sed 's/.*=//' | nl > tmp1.txt |
24 |
|
lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
25 |
|
if [ $lncnt -lt 3 ]; then |
26 |
|
if [ $verbose -gt 0 ]; then |
27 |
|
echo Not enough lines of output when searching for "$2" 1>&2 |
28 |
|
fi |
29 |
|
return 99 |
30 |
|
fi |
31 |
else |
else |
32 |
echo testoutput_for_prop: output.txt from model run was not readable 1>&2 |
echo testoutput_for_prop: output.txt from model run was not readable 1>&2 |
33 |
return 99 |
return 99 |
36 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2 |
37 |
fi |
fi |
38 |
grep "$2" $1/results/output.txt | sed 's/.*=//' | nl > tmp2.txt |
grep "$2" $1/results/output.txt | sed 's/.*=//' | nl > tmp2.txt |
39 |
|
lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
40 |
|
if [ $lncnt -lt 3 ]; then |
41 |
|
if [ $verbose -gt 0 ]; then |
42 |
|
echo Not enough lines of output when searching for "$2" 1>&2 |
43 |
|
fi |
44 |
|
return 99 |
45 |
|
fi |
46 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
47 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
48 |
fi |
fi |
84 |
|
|
85 |
testoutput() |
testoutput() |
86 |
{ |
{ |
87 |
# testoutput diretory |
# testoutput diretory subdir |
88 |
# |
# |
89 |
# test output in "directory" |
# test output in "directory" |
90 |
|
|
91 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
92 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
93 |
fi |
fi |
94 |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual"; cg2dres=$? |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$? |
95 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
96 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
97 |
fi |
fi |
98 |
|
|
99 |
if [ $testmore -gt 0 ]; then |
if [ $longtest -gt 0 ]; then |
100 |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum"; tmin=$? |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
101 |
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum"; tmax=$? |
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
102 |
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean"; tmean=$? |
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$? |
103 |
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d."; tsd=$? |
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$? |
104 |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum"; smin=$? |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
105 |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum"; smax=$? |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
106 |
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean"; smean=$? |
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$? |
107 |
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d."; ssd=$? |
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$? |
108 |
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum"; umin=$? |
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
109 |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum"; umax=$? |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
110 |
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean"; umean=$? |
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$? |
111 |
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d."; usd=$? |
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$? |
112 |
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum"; vmin=$? |
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
113 |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum"; vmax=$? |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
114 |
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean"; vmean=$? |
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$? |
115 |
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d."; vsd=$? |
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$? |
116 |
else |
else |
117 |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum"; tmin=$? |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
118 |
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum"; tmax=$? |
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
119 |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum"; smin=$? |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
120 |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum"; smax=$? |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
121 |
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum"; umin=$? |
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
122 |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum"; umax=$? |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
123 |
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum"; vmin=$? |
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
124 |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum"; vmax=$? |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
125 |
fi |
fi |
126 |
|
|
127 |
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
136 |
( cd $1; |
( cd $1; |
137 |
if [ $quick -eq 0 -o ! -r Makefile ]; then |
if [ $quick -eq 0 -o ! -r Makefile ]; then |
138 |
printf 'genmake ... ' 1>&2 |
printf 'genmake ... ' 1>&2 |
139 |
../../../tools/genmake -ieee -mods=../code > make.log 2>&1 |
if [ $ieee -eq 0 ]; then |
140 |
|
../../../tools/genmake -mods=../code > make.log 2>&1 |
141 |
|
else |
142 |
|
../../../tools/genmake -ieee -mods=../code > make.log 2>&1 |
143 |
|
fi |
144 |
if [ $? -ne 0 ]; then |
if [ $? -ne 0 ]; then |
145 |
tail make.log |
tail make.log |
146 |
echo makemodel: genmake failed 1>&2 |
echo genmakemodel: genmake failed 1>&2 |
147 |
return 1 |
return 1 |
148 |
else |
else |
149 |
echo succesful 1>&2 |
echo succesful 1>&2 |
152 |
) |
) |
153 |
} |
} |
154 |
|
|
155 |
|
makecleancompile() |
156 |
|
{ |
157 |
|
# makecleancompile directory |
158 |
|
( cd $1; |
159 |
|
if [ $force -gt 0 ]; then |
160 |
|
rm -f output.txt |
161 |
|
printf 'make clean ... ' 2>&1 |
162 |
|
make CLEAN >> make.log 2>&1 |
163 |
|
if [ $? -ne 0 ]; then |
164 |
|
tail make.log |
165 |
|
echo makecleancompile: make clean failed 1>&2 |
166 |
|
return 1 |
167 |
|
else |
168 |
|
echo succesful 1>&2 |
169 |
|
fi |
170 |
|
fi |
171 |
|
) |
172 |
|
} |
173 |
|
|
174 |
|
makecleanupafter() |
175 |
|
{ |
176 |
|
# makeupafter directory |
177 |
|
( cd $1; |
178 |
|
if [ $clean -gt 0 ]; then |
179 |
|
rm -f output.txt |
180 |
|
printf 'make clean ... ' 2>&1 |
181 |
|
make CLEAN >> make.log 2>&1 |
182 |
|
if [ $? -ne 0 ]; then |
183 |
|
tail make.log |
184 |
|
echo makeupafter: make clean failed 1>&2 |
185 |
|
return 1 |
186 |
|
else |
187 |
|
echo succesful 1>&2 |
188 |
|
fi |
189 |
|
fi |
190 |
|
) |
191 |
|
} |
192 |
|
|
193 |
makedependmodel() |
makedependmodel() |
194 |
{ |
{ |
195 |
# makedependmodel directory |
# makedependmodel directory |
227 |
) |
) |
228 |
} |
} |
229 |
|
|
230 |
|
linkdata() |
231 |
|
{ |
232 |
|
# linkdata flag |
233 |
|
# symbolically link data files to run directory |
234 |
|
if [ $1 -ne 0 ]; then |
235 |
|
# if [ ! -r $2 ]; then |
236 |
|
# mkdir $2 |
237 |
|
# fi |
238 |
|
( cd $2; ln -sf ../input/* .) |
239 |
|
fi |
240 |
|
} |
241 |
|
|
242 |
runmodel() |
runmodel() |
243 |
{ |
{ |
244 |
# runmodel directory exe |
# runmodel directory exe |
247 |
|
|
248 |
( cd $1 |
( cd $1 |
249 |
if [ -x $2 ]; then |
if [ -x $2 ]; then |
250 |
if [ ! -r output.txt -o $quick -eq 0 ]; then |
if [ $quick -eq 0 ]; then |
251 |
echo runmodel: running... 1>&2 |
rm -f output.txt |
|
( ./$2 > output.txt 2>&1 ) && return 0 |
|
|
return 1 |
|
|
else |
|
|
echo runmodel: output.txt is newer than executable 1>&2 |
|
|
return 0 |
|
252 |
fi |
fi |
253 |
else |
printf 'runmodel: ' 1>&2 |
254 |
echo runmodel: executable \"$1/$2\" is missing 1>&2 |
make output.txt && return 0 |
255 |
return 1 |
return 1 |
256 |
fi |
fi |
257 |
) |
) |
258 |
} |
} |
324 |
-quick Skip "genmake" and "make depend" if the Makefile exists |
-quick Skip "genmake" and "make depend" if the Makefile exists |
325 |
-quiet Reduce the amount of output |
-quiet Reduce the amount of output |
326 |
-verbose Produce copious amounts of output |
-verbose Produce copious amounts of output |
327 |
|
-debug Produce even more output which will mean nothing to most |
328 |
|
-force Do "make CLEAN" before compiling. This forces a complete rebuild. |
329 |
|
-clean Do "make CLEAN" after compiling and testing. |
330 |
|
-shorttest Don't compare numeric output for mean and s.d. of variables. |
331 |
|
-noieee By default, $0 uses the -ieee option for genmake. This turns it off. |
332 |
|
-cleanup Aggresively removes all model output, executables and object files |
333 |
|
and then exits. Use with care. |
334 |
|
|
335 |
Normal usage: |
Normal usage: |
336 |
$0 * Configure, compile, run and analyze in all experiment directories |
$0 * Configure, compile, run and analyze in all experiment directories |
337 |
EOF |
EOF |
338 |
} |
} |
339 |
|
|
340 |
|
scandirs() |
341 |
|
{ |
342 |
|
if [ $# -eq 0 ]; then |
343 |
|
for arg in * |
344 |
|
do |
345 |
|
test -d $arg/input && echo $arg |
346 |
|
done |
347 |
|
else |
348 |
|
echo $* |
349 |
|
fi |
350 |
|
} |
351 |
|
|
352 |
|
clean_up() |
353 |
|
{ |
354 |
|
# Find all executables, object files, CPP'd source and model output |
355 |
|
# and DELETE it. |
356 |
|
for opt in '-name "mitgcmuv*"' '-name "*.o"' '-name "*.f"' '-name "*.c"' '-name "fort.*"' '-name "make.log"' '-path *results -prune -o -name "*.meta"' '-path *results -prune -o -name "*.data"' '-type l' |
357 |
|
do |
358 |
|
echo Cleaning: find . $opt -exec rm {} \; |
359 |
|
find . $opt -exec rm {} \; |
360 |
|
done |
361 |
|
} |
362 |
|
|
363 |
|
############################################################################### |
364 |
|
############################################################################### |
365 |
############################################################################### |
############################################################################### |
366 |
|
|
367 |
# Main function |
# Main function |
370 |
debug=0 |
debug=0 |
371 |
verbose=1 |
verbose=1 |
372 |
quick=0 |
quick=0 |
373 |
testmore=0 |
force=0 |
374 |
|
clean=0 |
375 |
|
ieee=1 |
376 |
|
longtest=1 |
377 |
expts='' |
expts='' |
378 |
|
|
379 |
# Process arguments |
# Process arguments |
380 |
for arg in $@ |
for arg in $@ |
381 |
do |
do |
382 |
case $arg in |
case $arg in |
383 |
|
-cleanup) clean_up; exit 0;; |
384 |
-quick) quick=1;; |
-quick) quick=1;; |
385 |
-verbose) verbose=2;; |
-verbose) verbose=2;; |
386 |
-debug) debug=1;; |
-debug) debug=1;; |
387 |
-testmore) testmore=1;; |
-force) force=1;; |
388 |
|
-clean) clean=1;; |
389 |
|
-noieee) ieee=0;; |
390 |
|
-shorttest) longtest=0;; |
391 |
-quiet) verbose=0;; |
-quiet) verbose=0;; |
392 |
-help) show_help; exit 0;; |
-help) show_help; exit 0;; |
393 |
|
-*) echo Unrecognized option:$arg; exit 9;; |
394 |
*) test -d $arg && expts=`echo $expts $arg`;; |
*) test -d $arg && expts=`echo $expts $arg`;; |
395 |
esac |
esac |
396 |
done |
done |
397 |
|
|
398 |
if [ ${#expts} -eq 0 ]; then |
if [ $force -gt 0 -a $quick -gt 0 ]; then |
399 |
echo Scanning all directories |
echo You specified -quick and -force together which conflict. |
400 |
for arg in * |
echo Please specify either -quick or -force or neither but not both. |
401 |
do |
exit 1 |
|
test -d $arg && expts=`echo $expts $arg` |
|
|
done |
|
402 |
fi |
fi |
403 |
|
|
404 |
|
#if [ ${#expts} -eq 0 ]; then |
405 |
|
# echo Scanning all directories |
406 |
|
# for arg in * |
407 |
|
# do |
408 |
|
# test -d $arg && expts=`echo $expts $arg` |
409 |
|
# done |
410 |
|
#fi |
411 |
|
expts=`scandirs $expts` |
412 |
|
|
413 |
createcodelet |
createcodelet |
414 |
|
|
415 |
if [ $testmore -gt 0 ]; then |
if [ $longtest -gt 0 ]; then |
416 |
cat << EOF > summary.txt |
cat << EOF > summary.txt |
417 |
T S U V |
T S U V |
418 |
C D M c m s m s m s m s |
C D M c m s m s m s m s |
441 |
echo Experiment: $dir |
echo Experiment: $dir |
442 |
echo |
echo |
443 |
unset genmake makedepend make run |
unset genmake makedepend make run |
444 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
if [ $longtest -gt 0 ]; then |
445 |
results='-- -- -- -- -- -- -- -- --' |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
446 |
genmakemodel $dir/input && genmake=Y \ |
else |
447 |
&& makedependmodel $dir/input && makedepend=Y \ |
results='-- -- -- -- -- -- -- -- --' |
448 |
&& makemodel $dir/input && make=Y \ |
fi |
449 |
&& runmodel $dir/input mitgcmuv && run=Y \ |
if [ -r $dir/build ]; then |
450 |
&& results=`testoutput $dir` |
seperatebuilddir=1 |
451 |
|
builddir=build |
452 |
|
rundir=build |
453 |
|
(cd $dir/input; rm -f *.{o,f,c,F} work* output.txt Make* make.log; ) |
454 |
|
(cd $dir/build; ln -sf ../input/* .) |
455 |
|
else |
456 |
|
seperatebuilddir=0 |
457 |
|
builddir=input |
458 |
|
rundir=input |
459 |
|
fi |
460 |
|
genmakemodel $dir/$builddir && genmake=Y \ |
461 |
|
&& makecleancompile $dir/$builddir \ |
462 |
|
&& makedependmodel $dir/$builddir && makedepend=Y \ |
463 |
|
&& makemodel $dir/$builddir && make=Y \ |
464 |
|
&& linkdata $seperatebuilddir $dir/$rundir \ |
465 |
|
&& runmodel $dir/$builddir mitgcmuv && run=Y \ |
466 |
|
&& results=`testoutput $dir $rundir` \ |
467 |
|
&& makecleanupafter $dir/$builddir |
468 |
echo |
echo |
469 |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results |
470 |
echo |
echo |