1 |
#!/bin/sh |
2 |
|
3 |
compare_lines() |
4 |
{ |
5 |
# use codelet to compare lines |
6 |
if [ $verbose -gt 1 ]; then |
7 |
cat tmp3.txt 1>&2 |
8 |
fi |
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return `./a.out < tmp3.txt` |
10 |
} |
11 |
|
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testoutput_for_prop() |
13 |
{ |
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# testoutput_for_prop dir s1 label subdir |
15 |
# |
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# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
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# using search strings s1 and text label |
18 |
|
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
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fi |
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if [ -r $1/$4/output.txt ]; then |
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grep "$2" $1/$4/output.txt | sed 's/.*=//' | nl > tmp1.txt |
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lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
25 |
if [ $lncnt -lt 3 ]; then |
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if [ $verbose -gt 0 ]; then |
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echo Not enough lines of output when searching for "$2" 1>&2 |
28 |
fi |
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return 99 |
30 |
fi |
31 |
else |
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echo testoutput_for_prop: output.txt from model run was not readable 1>&2 |
33 |
return 99 |
34 |
fi |
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2 |
37 |
fi |
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grep "$2" $1/results/output.txt | sed 's/.*=//' | nl > tmp2.txt |
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lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
40 |
if [ $lncnt -lt 3 ]; then |
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if [ $verbose -gt 0 ]; then |
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echo Not enough lines of output when searching for "$2" 1>&2 |
43 |
fi |
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return 99 |
45 |
fi |
46 |
if [ $debug -gt 0 ]; then |
47 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
48 |
fi |
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join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
50 |
if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: compare_lines 1>&2 |
52 |
fi |
53 |
compare_lines |
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digits_of_similarity=$? |
55 |
if [ $digits_of_similarity -eq 99 ]; then |
56 |
if [ $verbose -gt 0 ]; then |
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echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
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fi |
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digits_of_similarity=99 |
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else |
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if [ $verbose -gt 0 ]; then |
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echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
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fi |
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fi |
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rm tmp1.txt tmp2.txt tmp3.txt |
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|
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return $digits_of_similarity |
68 |
} |
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|
70 |
dashnum() |
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{ |
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# dashnum n1 n2 n3 ... |
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# |
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# print numbers using %3i format or "--" if number = 99 |
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for num in $@ |
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do |
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if [ $num = 99 ]; then |
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printf ' --' |
79 |
else |
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printf '%3i' $num |
81 |
fi |
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done |
83 |
} |
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|
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testoutput() |
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{ |
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# testoutput diretory subdir |
88 |
# |
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# test output in "directory" |
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|
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if [ $debug -gt 0 ]; then |
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echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
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fi |
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testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$? |
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if [ $debug -gt 0 ]; then |
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echo testoutput: cg2dres=$cg2dres 1>&2 |
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fi |
98 |
|
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if [ $longtest -gt 0 ]; then |
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testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
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testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
102 |
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$? |
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testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$? |
104 |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
105 |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
106 |
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$? |
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testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$? |
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testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
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testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
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testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$? |
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testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$? |
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testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
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testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
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testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$? |
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testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$? |
116 |
else |
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testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
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testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
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testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
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testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
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testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
122 |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
123 |
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
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testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
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fi |
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|
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dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
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$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
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#printf '%3i' $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
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# $umin $umax $umean $usd $vmin $vmax $vmean $vsd |
131 |
} |
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|
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genmakemodel() |
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{ |
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# genmakemodel directory |
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( cd $1; |
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if [ $quick -eq 0 -o ! -r Makefile ]; then |
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printf 'genmake ... ' 1>&2 |
139 |
find . -type l -exec rm {} \; |
140 |
if [ $ieee -eq 0 ]; then |
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../../../tools/genmake2 -mods=../code > make.log 2>&1 |
142 |
else |
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../../../tools/genmake2 -ieee -mods=../code > make.log 2>&1 |
144 |
fi |
145 |
if [ $? -ne 0 ]; then |
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tail make.log |
147 |
echo genmakemodel: $genmake failed 1>&2 |
148 |
return 1 |
149 |
else |
150 |
echo succesful 1>&2 |
151 |
fi |
152 |
fi |
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) |
154 |
} |
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|
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makecleancompile() |
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{ |
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# makecleancompile directory |
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( cd $1; |
160 |
if [ $force -gt 0 ]; then |
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rm -f output.txt |
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printf 'make clean ... ' 2>&1 |
163 |
make CLEAN >> make.log 2>&1 |
164 |
if [ $? -ne 0 ]; then |
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tail make.log |
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echo makecleancompile: make clean failed 1>&2 |
167 |
return 1 |
168 |
else |
169 |
echo succesful 1>&2 |
170 |
fi |
171 |
fi |
172 |
) |
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} |
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|
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makecleanupafter() |
176 |
{ |
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# makeupafter directory |
178 |
( cd $1; |
179 |
if [ $clean -gt 0 ]; then |
180 |
rm -f output.txt |
181 |
printf 'make clean ... ' 2>&1 |
182 |
make CLEAN >> make.log 2>&1 |
183 |
if [ $? -ne 0 ]; then |
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tail make.log |
185 |
echo makeupafter: make clean failed 1>&2 |
186 |
return 1 |
187 |
else |
188 |
echo succesful 1>&2 |
189 |
fi |
190 |
fi |
191 |
) |
192 |
} |
193 |
|
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makedependmodel() |
195 |
{ |
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# makedependmodel directory |
197 |
( cd $1; |
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if [ $quick -eq 0 -o ! -r Makefile ]; then |
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printf 'make depend ... ' 1>&2 |
200 |
make cleanlinks >> make.log 2>&1 |
201 |
make depend >> make.log 2>&1 |
202 |
if [ $? -ne 0 ]; then |
203 |
tail make.log |
204 |
echo makemodel: make depend failed 1>&2 |
205 |
return 1 |
206 |
else |
207 |
echo succesful 1>&2 |
208 |
fi |
209 |
fi |
210 |
) |
211 |
} |
212 |
|
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makemodel() |
214 |
{ |
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# makemodel directory |
216 |
( cd $1; |
217 |
if [ -r Makefile ]; then |
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printf 'make ... ' 1>&2 |
219 |
make >> make.log 2>&1 |
220 |
if [ $? -ne 0 ]; then |
221 |
tail make.log |
222 |
echo failed 1>&2 |
223 |
return 1 |
224 |
else |
225 |
echo succesful 1>&2 |
226 |
fi |
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fi |
228 |
) |
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} |
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|
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linkdata() |
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{ |
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# linkdata flag |
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# |
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# symbolically link data files to run directory |
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if test "x$1" = x1 ; then |
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( |
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cd $2 |
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if test "x$ADM" = x ; then |
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files=`( cd ../input ; ls -1 | grep -v CVS )` |
241 |
for i in $files ; do |
242 |
if test ! -d "../input/"$i ; then |
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ln -sf "../input/"$i $i |
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fi |
245 |
done |
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else |
247 |
files=`( cd ../input ; ls -1 *.bin | grep -v CVS )` |
248 |
for i in $files ; do |
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if test ! -d "../input/"$i ; then |
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ln -sf "../input/"$i $i |
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fi |
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done |
253 |
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
254 |
for i in $files ; do |
255 |
if test ! -d "../input_ad/"$i ; then |
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ln -sf "../input_ad/"$i $i |
257 |
fi |
258 |
done |
259 |
fi |
260 |
) |
261 |
fi |
262 |
} |
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|
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runmodel() |
265 |
{ |
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# runmodel directory exe |
267 |
# |
268 |
# runs the model "exe" in "directory" (exe is relative to directory) |
269 |
|
270 |
( cd $1 |
271 |
if [ -x $2 ]; then |
272 |
if [ $quick -eq 0 ]; then |
273 |
rm -f output.txt |
274 |
fi |
275 |
if [ $debug -gt 0 ]; then |
276 |
echo -n runmodel: pwd= 1>&2 |
277 |
pwd 1>&2 |
278 |
fi |
279 |
printf 'runmodel: ' 1>&2 |
280 |
make output.txt && return 0 |
281 |
return 1 |
282 |
fi |
283 |
) |
284 |
} |
285 |
|
286 |
copynewresults() |
287 |
{ |
288 |
# copynewresults directory |
289 |
# |
290 |
# runs the model "exe" in "directory" (exe is relative to directory) |
291 |
|
292 |
( cd $1 |
293 |
if [ $newresults -eq 1 ]; then |
294 |
if [ -r output.txt ]; then |
295 |
cp -f output.txt ../results/ |
296 |
return 0 |
297 |
fi |
298 |
fi |
299 |
) |
300 |
} |
301 |
|
302 |
createcodelet() |
303 |
{ |
304 |
# create codelet for comparing model output |
305 |
cat > tmp_cmpnum.f <<EOFA |
306 |
program cmpnum |
307 |
implicit none |
308 |
real*8 a,b,diff |
309 |
integer linnum,best |
310 |
best=-16 |
311 |
99 read(*,*,end=70,err=60) linnum,a,b |
312 |
diff=0.5*(abs(a)+abs(b)) |
313 |
c print *,a,b,diff,abs(a-b)/diff |
314 |
if (diff.gt.1.e-12) then |
315 |
diff=abs(a-b)/diff |
316 |
if (diff.gt.0.) then |
317 |
c print *,int(log10(diff)),diff |
318 |
linnum=int(log10(diff)) |
319 |
best=max(best,linnum) |
320 |
endif |
321 |
else |
322 |
if (best.eq.-16.and.diff.ne.0.) best=-22 |
323 |
endif |
324 |
goto 99 |
325 |
60 stop 'cmpnum: An error occured reading a,b' |
326 |
70 print *,-best |
327 |
end |
328 |
EOFA |
329 |
f77 tmp_cmpnum.f |
330 |
if [ -x ./a.out ]; then |
331 |
return 0 |
332 |
else |
333 |
echo createcodelet: failed to compile codelet 1>&2 |
334 |
exit 1 |
335 |
fi |
336 |
} |
337 |
|
338 |
formatresults() |
339 |
{ |
340 |
# formatresults expt genmake depend make run results* |
341 |
|
342 |
nm=$1 |
343 |
printf '%s %s %s %s' $2 $3 $4 $5 |
344 |
shift; shift; shift; shift; shift; |
345 |
printf '%3s' $@ |
346 |
|
347 |
if [ $1 = '--' ]; then |
348 |
printf ' N/O ' |
349 |
else |
350 |
if [ $1 -gt 12 ]; then |
351 |
printf ' pass' |
352 |
else |
353 |
printf ' FAIL' |
354 |
fi |
355 |
fi |
356 |
printf ' %s' $nm |
357 |
printf '\n' |
358 |
|
359 |
} |
360 |
|
361 |
show_help() |
362 |
{ |
363 |
cat - << EOF |
364 |
$0 [-help] [-quick] [-verbose] dir1 [dir2] [...] |
365 |
-help Show this help message |
366 |
-quick Skip "genmake" and "make depend" if the Makefile exists |
367 |
-newresults Copy the output.txt into results/ |
368 |
-quiet Reduce the amount of output |
369 |
-verbose Produce copious amounts of output |
370 |
-debug Produce even more output which will mean nothing to most |
371 |
-force Do "make CLEAN" before compiling. This forces a complete rebuild. |
372 |
-clean Do "make CLEAN" after compiling and testing. |
373 |
-shorttest Don't compare numeric output for mean and s.d. of variables. |
374 |
-noieee By default, $0 uses the -ieee option for genmake. This turns it off. |
375 |
-cleanup Aggresively removes all model output, executables and object files |
376 |
and then exits. Use with care. |
377 |
|
378 |
Normal usage: |
379 |
$0 * Configure, compile, run and analyze in all experiment directories |
380 |
EOF |
381 |
} |
382 |
|
383 |
scandirs() |
384 |
{ |
385 |
if [ $# -eq 0 ]; then |
386 |
for arg in * |
387 |
do |
388 |
test -d $arg/input && echo $arg |
389 |
done |
390 |
else |
391 |
echo $* |
392 |
fi |
393 |
} |
394 |
|
395 |
clean_up() |
396 |
{ |
397 |
# Find all executables, object files, CPP'd source and model output |
398 |
# and DELETE it. |
399 |
for opt in '-name "mitgcmuv*"' '-name "*.o"' '-name "*.f"' '-name "*.c"' '-name "fort.*"' '-name "make.log"' '-path *results -prune -o -name "*.meta"' '-path *results -prune -o -name "*.data"' '-type l' |
400 |
do |
401 |
echo Cleaning: find . $opt -exec rm {} \; |
402 |
find . $opt -exec rm {} \; |
403 |
done |
404 |
} |
405 |
|
406 |
############################################################################### |
407 |
############################################################################### |
408 |
############################################################################### |
409 |
|
410 |
# Main function |
411 |
|
412 |
# Default properties |
413 |
debug=0 |
414 |
verbose=1 |
415 |
quick=0 |
416 |
newresults=0 |
417 |
force=0 |
418 |
clean=0 |
419 |
ieee=1 |
420 |
longtest=1 |
421 |
expts='' |
422 |
genmake=genmake |
423 |
|
424 |
# Process arguments |
425 |
for arg in $@ |
426 |
do |
427 |
case $arg in |
428 |
-cleanup) clean_up; exit 0;; |
429 |
-quick) quick=1;; |
430 |
-newresults) newresults=1;; |
431 |
-verbose) verbose=2;; |
432 |
-debug) debug=1;; |
433 |
-force) force=1;; |
434 |
-clean) clean=1;; |
435 |
-noieee) ieee=0;; |
436 |
-shorttest) longtest=0;; |
437 |
-quiet) verbose=0;; |
438 |
-help) show_help; exit 0;; |
439 |
-*) echo Unrecognized option:$arg; exit 9;; |
440 |
*) test -d $arg && expts=`echo $expts $arg`;; |
441 |
esac |
442 |
done |
443 |
|
444 |
if [ $force -gt 0 -a $quick -gt 0 ]; then |
445 |
echo You specified -quick and -force together which conflict. |
446 |
echo Please specify either -quick or -force or neither but not both. |
447 |
exit 1 |
448 |
fi |
449 |
|
450 |
#if [ ${#expts} -eq 0 ]; then |
451 |
# echo Scanning all directories |
452 |
# for arg in * |
453 |
# do |
454 |
# test -d $arg && expts=`echo $expts $arg` |
455 |
# done |
456 |
#fi |
457 |
expts=`scandirs $expts` |
458 |
|
459 |
createcodelet |
460 |
|
461 |
date > summary.txt |
462 |
if [ $longtest -gt 0 ]; then |
463 |
cat << EOF >> summary.txt |
464 |
T S U V |
465 |
C D M c m s m s m s m s |
466 |
n p a R g m m e . m m e . m m e . m m e . |
467 |
f n k u 2 i a a d i a a d i a a d i a a d |
468 |
g d e n d n x n . n x n . n x n . n x n . |
469 |
|
470 |
EOF |
471 |
else |
472 |
cat << EOF >> summary.txt |
473 |
T S U V |
474 |
C D M c |
475 |
n p a R g m m m m m m m m |
476 |
f n k u 2 i a i a i a i a |
477 |
g d e n d n x n x n x n x |
478 |
|
479 |
EOF |
480 |
fi |
481 |
|
482 |
# Now configue, make, run and test in each directory |
483 |
for dir in $expts |
484 |
do |
485 |
if [ -r $dir/results/output.txt ]; then |
486 |
echo ------------------------------------------------------------------------------- |
487 |
echo |
488 |
echo Experiment: $dir |
489 |
echo |
490 |
unset genmakepass makedepend make run |
491 |
if [ $longtest -gt 0 ]; then |
492 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
493 |
else |
494 |
results='-- -- -- -- -- -- -- -- --' |
495 |
fi |
496 |
if [ -r $dir/build ]; then |
497 |
seperatebuilddir=1 |
498 |
builddir=build |
499 |
rundir=build |
500 |
(cd $dir/input; rm -f *.{o,f,c,F,h} work* output.txt Make* make.log; ) |
501 |
else |
502 |
seperatebuilddir=0 |
503 |
builddir=input |
504 |
rundir=input |
505 |
fi |
506 |
genmakemodel $dir/$builddir && genmakepass=Y \ |
507 |
&& makecleancompile $dir/$builddir \ |
508 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
509 |
&& makemodel $dir/$builddir && make=Y \ |
510 |
&& linkdata $seperatebuilddir $dir/$rundir \ |
511 |
&& runmodel $dir/$builddir mitgcmuv && run=Y \ |
512 |
&& results=`testoutput $dir $rundir` \ |
513 |
&& copynewresults $dir/$rundir \ |
514 |
&& makecleanupafter $dir/$builddir |
515 |
echo |
516 |
formatresults $dir ${genmakepass:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results |
517 |
echo |
518 |
formatresults $dir ${genmakepass:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results >> summary.txt |
519 |
fi |
520 |
done |
521 |
|
522 |
rm tmp_cmpnum.f a.out |
523 |
|
524 |
echo ------------------------------------------------------------------------------- |
525 |
echo |
526 |
date >> summary.txt |
527 |
cat summary.txt |