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#!/bin/sh |
2 |
|
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#EH3 Quick hack to cleanup previous runs |
4 |
cleanup_previous_runs() |
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{ |
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echo "Cleaning up previous runs..." |
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for i in * ; do |
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d="$i/input" |
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echo " $d:" |
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if test -d $d -a -r "$i/results/output.txt" -a -r "$d/Makefile" ; then |
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make -C $d CLEAN |
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fi |
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done |
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} |
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|
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compare_lines() |
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{ |
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# use codelet to compare lines |
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if [ $verbose -gt 1 ]; then |
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cat tmp3.txt 1>&2 |
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fi |
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return `./a.out < tmp3.txt` |
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} |
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|
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testoutput_for_prop() |
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{ |
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# testoutput_for_prop dir s1 label subdir |
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# |
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# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
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# using search strings s1 and text label |
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|
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
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fi |
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if [ -r $1/$4/output.txt ]; then |
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grep "$2" $1/$4/output.txt | sed 's/.*=//' | nl > tmp1.txt |
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lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
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if [ $lncnt -lt 3 ]; then |
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if [ $verbose -gt 0 ]; then |
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echo Not enough lines of output when searching for "$2" 1>&2 |
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fi |
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return 99 |
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fi |
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else |
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echo testoutput_for_prop: output.txt from model run was not readable 1>&2 |
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return 99 |
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fi |
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2 |
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fi |
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grep "$2" $1/results/output.txt | sed 's/.*=//' | nl > tmp2.txt |
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lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
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if [ $lncnt -lt 3 ]; then |
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if [ $verbose -gt 0 ]; then |
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echo Not enough lines of output when searching for "$2" 1>&2 |
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fi |
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return 99 |
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fi |
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
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fi |
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join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: compare_lines 1>&2 |
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fi |
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compare_lines |
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digits_of_similarity=$? |
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if [ $digits_of_similarity -eq 99 ]; then |
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if [ $verbose -gt 0 ]; then |
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echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
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fi |
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digits_of_similarity=99 |
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else |
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if [ $verbose -gt 0 ]; then |
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echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
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fi |
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fi |
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rm tmp1.txt tmp2.txt tmp3.txt |
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|
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return $digits_of_similarity |
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} |
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|
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dashnum() |
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{ |
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# dashnum n1 n2 n3 ... |
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# |
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# print numbers using %3i format or "--" if number = 99 |
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for num in $@ |
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do |
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if [ $num = 99 ]; then |
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printf ' --' |
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else |
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printf '%3i' $num |
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fi |
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done |
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} |
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|
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testoutput() |
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{ |
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# testoutput diretory subdir |
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# |
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# test output in "directory" |
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|
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if [ $debug -gt 0 ]; then |
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echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
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fi |
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testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$? |
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if [ $debug -gt 0 ]; then |
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echo testoutput: cg2dres=$cg2dres 1>&2 |
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fi |
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|
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if [ $longtest -gt 0 ]; then |
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testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
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testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
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testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$? |
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testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$? |
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testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
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testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
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testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$? |
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testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$? |
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testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
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testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
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testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$? |
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testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$? |
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testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
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testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
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testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$? |
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testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$? |
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else |
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testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
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testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
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testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
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testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
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testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
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testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
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testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
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testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
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fi |
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|
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dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
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$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
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#printf '%3i' $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
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# $umin $umax $umean $usd $vmin $vmax $vmean $vsd |
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} |
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|
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genmakemodel() |
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{ |
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# genmakemodel directory |
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( cd $1; |
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if [ $quick -eq 0 -o ! -r Makefile ]; then |
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printf 'genmake ... ' 1>&2 |
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if [ $ieee -eq 0 ]; then |
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# ../../../tools/genmake -mods=../code > make.log 2>&1 |
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../../../tools/genmake2 --mods=../code --optfile=../../../tools/build_options/linux_g77 > make.log 2>&1 |
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else |
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# ../../../tools/genmake -ieee -mods=../code > make.log 2>&1 |
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../../../tools/genmake2 -ieee --mods=../code --optfile=../../../tools/build_options/linux_g77_faulks > make.log 2>&1 |
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fi |
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if [ $? -ne 0 ]; then |
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tail make.log |
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echo genmakemodel: genmake failed 1>&2 |
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return 1 |
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else |
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echo succesful 1>&2 |
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fi |
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fi |
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) |
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} |
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|
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makecleancompile() |
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{ |
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# makecleancompile directory |
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( cd $1; |
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if [ $force -gt 0 ]; then |
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rm -f output.txt |
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printf 'make clean ... ' 2>&1 |
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make CLEAN >> make.log 2>&1 |
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if [ $? -ne 0 ]; then |
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tail make.log |
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echo makecleancompile: make clean failed 1>&2 |
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return 1 |
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else |
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echo succesful 1>&2 |
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fi |
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fi |
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) |
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} |
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|
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makecleanupafter() |
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{ |
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# makeupafter directory |
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( cd $1; |
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if [ $clean -gt 0 ]; then |
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rm -f output.txt |
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printf 'make clean ... ' 2>&1 |
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make CLEAN >> make.log 2>&1 |
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if [ $? -ne 0 ]; then |
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tail make.log |
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echo makeupafter: make clean failed 1>&2 |
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return 1 |
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else |
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echo succesful 1>&2 |
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fi |
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fi |
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) |
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} |
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|
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makedependmodel() |
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{ |
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# makedependmodel directory |
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( cd $1; |
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if [ $quick -eq 0 -o ! -r Makefile ]; then |
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printf 'make depend ... ' 1>&2 |
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make cleanlinks >> make.log 2>&1 |
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make depend >> make.log 2>&1 |
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if [ $? -ne 0 ]; then |
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tail make.log |
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echo makemodel: make depend failed 1>&2 |
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return 1 |
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else |
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echo succesful 1>&2 |
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fi |
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fi |
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) |
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} |
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|
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makemodel() |
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{ |
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# makemodel directory |
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( cd $1; |
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if [ -r Makefile ]; then |
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printf 'make ... ' 1>&2 |
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make >> make.log 2>&1 |
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if [ $? -ne 0 ]; then |
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tail make.log |
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echo failed 1>&2 |
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return 1 |
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else |
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echo succesful 1>&2 |
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fi |
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fi |
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) |
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} |
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|
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linkdata() |
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{ |
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# linkdata flag |
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# symbolically link data files to run directory |
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if [ $1 -ne 0 ]; then |
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# if [ ! -r $2 ]; then |
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# mkdir $2 |
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# fi |
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( cd $2; ln -sf ../input/* .) |
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fi |
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} |
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|
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runmodel() |
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{ |
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# runmodel directory exe |
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# |
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# runs the model "exe" in "directory" (exe is relative to directory) |
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|
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( cd $1 |
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if [ -x $2 ]; then |
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if [ $quick -eq 0 ]; then |
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rm -f output.txt |
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fi |
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printf 'runmodel: ' 1>&2 |
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make output.txt && return 0 |
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return 1 |
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fi |
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) |
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} |
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|
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createcodelet() |
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{ |
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# create codelet for comparing model output |
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cat > tmp_cmpnum.f <<EOFA |
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program cmpnum |
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implicit none |
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real*8 a,b,diff |
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integer linnum,best |
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best=-16 |
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99 read(*,*,end=70,err=60) linnum,a,b |
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diff=0.5*(abs(a)+abs(b)) |
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c print *,a,b,diff,abs(a-b)/diff |
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if (diff.gt.1.e-12) then |
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diff=abs(a-b)/diff |
289 |
if (diff.gt.0.) then |
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c print *,int(log10(diff)),diff |
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linnum=int(log10(diff)) |
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best=max(best,linnum) |
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endif |
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else |
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if (best.eq.-16.and.diff.ne.0.) best=-22 |
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endif |
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goto 99 |
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60 stop 'cmpnum: An error occured reading a,b' |
299 |
70 print *,-best |
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end |
301 |
EOFA |
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f77 tmp_cmpnum.f |
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if [ -x ./a.out ]; then |
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return 0 |
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else |
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echo createcodelet: failed to compile codelet 1>&2 |
307 |
exit 1 |
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fi |
309 |
} |
310 |
|
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formatresults() |
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{ |
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# formatresults expt genmake depend make run results* |
314 |
|
315 |
nm=$1 |
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printf '%s %s %s %s' $2 $3 $4 $5 |
317 |
shift; shift; shift; shift; shift; |
318 |
printf '%3s' $@ |
319 |
|
320 |
if [ $1 = '--' ]; then |
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printf ' N/O ' |
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else |
323 |
if [ $1 -gt 12 ]; then |
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printf ' pass' |
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else |
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printf ' FAIL' |
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fi |
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fi |
329 |
printf ' %s' $nm |
330 |
printf '\n' |
331 |
|
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} |
333 |
|
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show_help() |
335 |
{ |
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cat - << EOF |
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$0 [-help] [-quick] [-verbose] dir1 [dir2] [...] |
338 |
-help Show this help message |
339 |
-quick Skip "genmake" and "make depend" if the Makefile exists |
340 |
-quiet Reduce the amount of output |
341 |
-verbose Produce copious amounts of output |
342 |
-debug Produce even more output which will mean nothing to most |
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-force Do "make CLEAN" before compiling. This forces a complete rebuild. |
344 |
-clean Do "make CLEAN" after compiling and testing. |
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-shorttest Don't compare numeric output for mean and s.d. of variables. |
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-noieee By default, $0 uses the -ieee option for genmake. This turns it off. |
347 |
-cleanup Aggresively removes all model output, executables and object files |
348 |
and then exits. Use with care. |
349 |
|
350 |
Normal usage: |
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$0 * Configure, compile, run and analyze in all experiment directories |
352 |
EOF |
353 |
} |
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|
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scandirs() |
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{ |
357 |
if [ $# -eq 0 ]; then |
358 |
for arg in * |
359 |
do |
360 |
test -d $arg/input && echo $arg |
361 |
done |
362 |
else |
363 |
echo $* |
364 |
fi |
365 |
} |
366 |
|
367 |
clean_up() |
368 |
{ |
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# Find all executables, object files, CPP'd source and model output |
370 |
# and DELETE it. |
371 |
for opt in '-name "mitgcmuv*"' '-name "*.o"' '-name "*.f"' '-name "*.c"' '-name "fort.*"' '-name "make.log"' '-path *results -prune -o -name "*.meta"' '-path *results -prune -o -name "*.data"' '-type l' |
372 |
do |
373 |
echo Cleaning: find . $opt -exec rm {} \; |
374 |
find . $opt -exec rm {} \; |
375 |
done |
376 |
} |
377 |
|
378 |
############################################################################### |
379 |
############################################################################### |
380 |
############################################################################### |
381 |
|
382 |
# Main function |
383 |
|
384 |
# Default properties |
385 |
debug=0 |
386 |
verbose=1 |
387 |
quick=0 |
388 |
force=0 |
389 |
clean=0 |
390 |
ieee=1 |
391 |
longtest=1 |
392 |
expts='' |
393 |
|
394 |
# Process arguments |
395 |
for arg in $@ |
396 |
do |
397 |
case $arg in |
398 |
-cleanup) clean_up; exit 0;; |
399 |
-quick) quick=1;; |
400 |
-verbose) verbose=2;; |
401 |
-debug) debug=1;; |
402 |
-force) force=1;; |
403 |
-clean) clean=1;; |
404 |
-noieee) ieee=0;; |
405 |
-shorttest) longtest=0;; |
406 |
-quiet) verbose=0;; |
407 |
-help) show_help; exit 0;; |
408 |
-*) echo Unrecognized option:$arg; exit 9;; |
409 |
*) test -d $arg && expts=`echo $expts $arg`;; |
410 |
esac |
411 |
done |
412 |
|
413 |
if [ $force -gt 0 -a $quick -gt 0 ]; then |
414 |
echo You specified -quick and -force together which conflict. |
415 |
echo Please specify either -quick or -force or neither but not both. |
416 |
exit 1 |
417 |
fi |
418 |
|
419 |
#if [ ${#expts} -eq 0 ]; then |
420 |
# echo Scanning all directories |
421 |
# for arg in * |
422 |
# do |
423 |
# test -d $arg && expts=`echo $expts $arg` |
424 |
# done |
425 |
#fi |
426 |
expts=`scandirs $expts` |
427 |
|
428 |
createcodelet |
429 |
|
430 |
date > summary.txt |
431 |
if [ $longtest -gt 0 ]; then |
432 |
cat << EOF >> summary.txt |
433 |
T S U V |
434 |
C D M c m s m s m s m s |
435 |
n p a R g m m e . m m e . m m e . m m e . |
436 |
f n k u 2 i a a d i a a d i a a d i a a d |
437 |
g d e n d n x n . n x n . n x n . n x n . |
438 |
|
439 |
EOF |
440 |
else |
441 |
cat << EOF >> summary.txt |
442 |
T S U V |
443 |
C D M c |
444 |
n p a R g m m m m m m m m |
445 |
f n k u 2 i a i a i a i a |
446 |
g d e n d n x n x n x n x |
447 |
|
448 |
EOF |
449 |
fi |
450 |
|
451 |
#EH3 Quick hack to cleanup previous runs |
452 |
cleanup_previous_runs |
453 |
|
454 |
# Now configue, make, run and test in each directory |
455 |
for dir in $expts |
456 |
do |
457 |
if [ -r $dir/results/output.txt ]; then |
458 |
echo ------------------------------------------------------------------------------- |
459 |
echo |
460 |
echo Experiment: $dir |
461 |
echo |
462 |
unset genmake makedepend make run |
463 |
if [ $longtest -gt 0 ]; then |
464 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
465 |
else |
466 |
results='-- -- -- -- -- -- -- -- --' |
467 |
fi |
468 |
if [ -r $dir/build ]; then |
469 |
seperatebuilddir=1 |
470 |
builddir=build |
471 |
rundir=build |
472 |
(cd $dir/input; rm -f *.{o,f,c,F} work* output.txt Make* make.log; ) |
473 |
(cd $dir/build; ln -sf ../input/* .) |
474 |
else |
475 |
seperatebuilddir=0 |
476 |
builddir=input |
477 |
rundir=input |
478 |
fi |
479 |
genmakemodel $dir/$builddir && genmake=Y \ |
480 |
&& makecleancompile $dir/$builddir \ |
481 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
482 |
&& makemodel $dir/$builddir && make=Y \ |
483 |
&& linkdata $seperatebuilddir $dir/$rundir \ |
484 |
&& runmodel $dir/$builddir mitgcmuv && run=Y \ |
485 |
&& results=`testoutput $dir $rundir` \ |
486 |
&& makecleanupafter $dir/$builddir |
487 |
echo |
488 |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results |
489 |
echo |
490 |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results >> summary.txt |
491 |
fi |
492 |
done |
493 |
|
494 |
rm tmp_cmpnum.f a.out |
495 |
|
496 |
echo ------------------------------------------------------------------------------- |
497 |
echo |
498 |
date >> summary.txt |
499 |
cat summary.txt |