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Revision 1.94 - (show annotations) (download)
Thu Sep 6 22:31:45 2007 UTC (16 years, 6 months ago) by jmc
Branch: MAIN
Changes since 1.93: +113 -68 lines
Allow to choose (per experiment) the list of tested output variables
 and the main variable (used to issue a pass/FAIL ) ;
for now, done by adding the specific list in file: [exp]/input/tr_checklist ;
default is unchange: >cg2d< , (T,S,U,V,5 tracers)_[min,max,mean,StD] ;
Also modify printing of summary:
a) ">" NN "<" indicates the "main" variable (pass/FAIL)
b) echo the list of tested variables in the individual summary.txt of
 each experiment.

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.93 2007/09/05 16:09:31 jmc Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi threaded (using eedata.mth)"
15 echo " (-mpi) compile and run using MPI"
16 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
17 echo " (DEF=\"-ieee\")"
18 echo " (-of=|-optfile=)STRING list of optfiles to use"
19 echo " (-a|-addr) STRING list of email recipients"
20 echo " (DEF=\"edhill@mitgcm.org\")"
21 echo " (-t|-tdir) STRING list of group and/or exp. dirs to test"
22 echo " (recognized groups: basic, tutorials)"
23 echo " (DEF=\"\" which test all)"
24 echo " (-skd|-skipdir) STRING list of exp. dirs to skip"
25 echo " (DEF=\"\" which test all)"
26 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
27 echo " Bourne-compatible \"sh\" shell"
28 echo " (DEF=\"\" for \"bash\")"
29 echo " (-adm|-ad) perform an adjoint run"
30 echo " (-command) STRING command to run"
31 echo " (DEF=\"make output.txt\")"
32 echo " (-m|-make) STRING command to use for \"make\""
33 echo " (DEF=\"make\")"
34 echo " (-odir) STRING used to build output directory name"
35 echo " (DEF=\"hostname\")"
36 echo " (-ptr|-ptracers) STRING specify which ptracers to test"
37 echo " (DEF=\"1 2 3 4 5\")"
38 echo " (-match) NUMBER Matching Criteria (number of digits)"
39 echo " (DEF=\"12\")"
40 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
41 echo " (-clean) *ONLY* run \"make CLEAN\""
42 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
43 echo " (-nogenmake|-ng) skip the genmake stage"
44 echo " (-noclean|-nc) skip the \"make clean\" stage"
45 echo " (-nodepend|-nd) skip the \"make depend\" stage"
46 echo " (-deldir|-dd) on success, delete the output directory"
47 echo " (-ts) provide timing information per timestep"
48 echo " (-papis) provide MFlop/s per timestep using PAPI"
49 echo " (-pcls) provide MFlop/s per timestep using PCL"
50 echo
51 echo "and where STRING can be a whitespace-delimited list"
52 echo "such as:"
53 echo
54 echo " -t 'exp0 exp2 exp3' "
55 echo " -addr='abc@123.com testing@home.org'"
56 echo
57 echo "provided that the expression is properly quoted within the current"
58 echo "shell (note the use of single quotes to protect white space)."
59 echo
60 exit 1
61 }
62
63 # build the mpack utility
64 build_mpack()
65 {
66 printf "building the mpack utility... "
67 if test ! -x "$MPACKDIR/mpack" ; then
68 if test ! -d $MPACKDIR ; then
69 echo
70 echo "Error: can't find \"$MPACKDIR\""
71 echo " are you sure this program is being run in the correct "
72 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
73 echo
74 HAVE_MPACK=f
75 fi
76 printf "building mpack... "
77 if test "x$CC" = x ; then
78 export CC=cc
79 fi
80 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
81 RETVAL=$?
82 if test "x$RETVAL" != x0 ; then
83 echo
84 echo "Error building the mpack tools at: $MPACK_DIR"
85 echo
86 HAVE_MPACK=f
87 else
88 rm -f tr_build_mpack.out
89 HAVE_MPACK=t
90 fi
91 else
92 HAVE_MPACK=t
93 fi
94 echo "OK"
95 }
96
97 testoutput_var()
98 {
99 # testoutput_var dir s1 label subdir extension
100 #
101 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
102 # with same output from reference file $dir/results/output.$extension
103 # using search strings s1 and text label
104
105 if [ $debug -gt 0 ]; then
106 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
107 fi
108 if [ -r $1/$4/$OUTPUTFILE ]; then
109 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
110 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
111 if [ $lncntA -lt 3 ]; then
112 if [ $verbose -gt 0 ]; then
113 echo Not enough lines of output when searching for "$2" 1>&2
114 fi
115 return 99
116 fi
117 else
118 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
119 return 99
120 fi
121 if [ $debug -gt 0 ]; then
122 echo testoutput_var: grep "$2" $1/results/output.$5 1>&2
123 fi
124 grep "$2" $1/results/output.$5 | sed 's/.*=//' | cat -n > tmp2.txt
125 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
126 if [ $lncntB -lt 3 ]; then
127 if [ $verbose -gt 0 ]; then
128 echo Not enough lines of output when searching for "$2" 1>&2
129 fi
130 return 99
131 fi
132 if [ $lncntA -ne $lncntB ]; then
133 if [ $verbose -gt 0 ]; then
134 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
135 fi
136 return 99
137 fi
138 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
139 if [ $has_nan -gt 0 ] ; then
140 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
141 return 99
142 fi
143 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
144 if [ $has_inf -gt 0 ] ; then
145 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
146 return 99
147 fi
148 if [ $debug -gt 0 ]; then
149 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
150 fi
151 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
152 if [ $debug -gt 0 ]; then
153 echo testoutput_var: compare_lines 1>&2
154 fi
155 if [ $verbose -gt 1 ]; then
156 cat tmp3.txt 1>&2
157 fi
158 echo "-1" >> tmp3.txt
159 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
160 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
161 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
162 if [ $digits_of_similarity -eq 99 ]; then
163 if [ $verbose -gt 0 ]; then
164 echo testoutput_var: No comparison was available for \"$2\" 1>&2
165 fi
166 digits_of_similarity=99
167 else
168 if [ $verbose -gt 0 ]; then
169 echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2
170 fi
171 fi
172 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
173
174 return $digits_of_similarity
175 }
176
177 dashnum()
178 {
179 # dashnum n1 n2 n3 ...
180 #
181 # print numbers using %3i format or "--" if number = 99
182
183 for num in $@ ; do
184 if [ $num = 99 ]; then
185 printf ' --'
186 else
187 printf '%3i' $num
188 fi
189 done
190 }
191
192 testoutput_ad()
193 {
194 grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $5}' > t05.txt
195 grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $5}' > t15.txt
196 grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $6}' > t06.txt
197 grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $6}' > t16.txt
198 join t05.txt t15.txt > t5.txt
199 join t06.txt t16.txt > t6.txt
200 echo "-1" >> t5.txt
201 echo "-1" >> t6.txt
202 digits_5=`./tr_cmpnum < t5.txt`
203 digits_6=`./tr_cmpnum < t6.txt`
204 dashnum $digits_5 $digits_6
205 rm -f t[01][56].txt t[56].txt
206 }
207
208 check_for_add_mon_output()
209 {
210 # Check for additional types of monitor output
211 if test "x$1" = x ; then
212 return
213 fi
214
215 for ii in $PTRACERS_NUM ; do
216 eval "HAVE_PTR0"$ii"=f"
217 done
218
219 ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max"
220 ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
221 for ii in $PTRACERS_NUM ; do
222 for jj in $ptr_add ; do
223 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
224 tst=`grep $name $1 | wc -l | awk '{print $1}'`
225 if test ! "x$tst" = x0 ; then
226 eval "HAVE_PTR0"$ii"=t"
227 fi
228 done
229 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"'
230 done
231 }
232
233 testoutput_run()
234 {
235 # testoutput_run directory subdir extension
236 #
237 # test output from 1 run in "directory"
238 if test "x$ADM" = x ; then
239 # default list of output variables to be checked:
240 # 1rst : main variable used to decide if it pass or FAIL
241 # others : number of matching digits to be printed in summary.txt
242 listChk=$DEF_CHECK_LIST
243 nbDef=`echo $listChk | awk '{print NF-1+3*gsub("+","E")}'`
244 # load experiment-specific list from file "tr_checklist" (if it exist)
245 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
246 sVar=`echo $listChk | awk '{print $1}'`
247 # remove 1rst var and expand the list: + => min max mean s.d
248 listVar=`echo $listChk | awk '{ for(i=2;i<=NF;i++){if (sub("+","",$i)) \
249 {printf " %s %s %s %s",$i"mn",$i"mx",$i"av",$i"sd"} else {printf " %s",$i} }}'`
250 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
251 for ii in 1 2 3 4 5 6 7 8 9 ; do
252 tst=`eval 'echo "$HAVE_PTR0'$ii'"'`
253 #echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
254 if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi
255 done
256 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'`
257 if test $tst != 1 ; then
258 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
259 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
260 echo "==> WARNING: in checked list:" $listVar 1>&2
261 #- put it back once:
262 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
263 fi
264 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
265 echo "listVar='$listVar'" > $CDIR"/summary.txt"
266 allargs=""
267 for xx in $listVar
268 do
269 case $xx in
270 'PS') if [ $debug -gt 0 ]
271 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
272 testoutput_var $1 "cg2d_init_res" "cg2d init. residual" $2 $3; yy=$?
273 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
274 'Tmn') testoutput_var $1 "dynstat_theta_min" "theta minimum" $2 $3; yy=$? ;;
275 'Tmx') testoutput_var $1 "dynstat_theta_max" "theta maximum" $2 $3; yy=$? ;;
276 'Tav') testoutput_var $1 "dynstat_theta_mean" "theta mean" $2 $3; yy=$? ;;
277 'Tsd') testoutput_var $1 "dynstat_theta_sd" "theta s.d." $2 $3; yy=$? ;;
278 'Smn') testoutput_var $1 "dynstat_salt_min" "salt minimum" $2 $3; yy=$? ;;
279 'Smx') testoutput_var $1 "dynstat_salt_max" "salt maximum" $2 $3; yy=$? ;;
280 'Sav') testoutput_var $1 "dynstat_salt_mean" "salt mean" $2 $3; yy=$? ;;
281 'Ssd') testoutput_var $1 "dynstat_salt_sd" "salt s.d." $2 $3; yy=$? ;;
282 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;;
283 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;;
284 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;;
285 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U s.d." $2 $3; yy=$? ;;
286 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;;
287 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;;
288 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;;
289 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V s.d." $2 $3; yy=$? ;;
290 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
291 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;;
292 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
293 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;;
294 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
295 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;;
296 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
297 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_sd" $2 $3; yy=$? ;;
298 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
299 esac
300 if test $xx = $sVar
301 then allargs="$allargs > $yy <"
302 else allargs="$allargs $yy"
303 fi
304 done
305
306 nbVar=`echo $listVar | awk '{print NF}'`
307 if [ $nbVar -lt $nbDef ] ; then
308 #-- fill line (up to standard length) with dot:
309 adNul=`expr $nbDef - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
310 echo $allargs $adNul
311 else
312 echo $allargs
313 fi
314
315 else
316 testoutput_ad $1 $2 "precision_grdchk_result"
317 fi
318 }
319
320 genmakemodel()
321 {
322 # genmakemodel directory
323 if test "x$NOGENMAKE" = xt ; then
324 echo "genmake skipped!"
325 else
326 if test "x$BASH" = x ; then
327 GENMAKE2="../../../tools/genmake2"
328 else
329 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
330 fi
331 (
332 cd $1;
333 command="$GENMAKE2 -ds -m $MAKE"
334 if test "x$ADM" = x ; then
335 command="$command --mods=../code"
336 else
337 command="$command --mods=../code_ad"
338 fi
339 if test "x$OPTFILE" != xNONE ; then
340 command="$command --optfile=$OPTFILE"
341 fi
342 if test "x$IEEE" != x ; then
343 command="$command -ieee"
344 fi
345 if test "x$MPI" = xt ; then
346 command="$command -mpi"
347 fi
348 if test "x$TS" = xt ; then
349 command="$command -ts"
350 fi
351 if test "x$PAPIS" = xt ; then
352 command="$command -papis"
353 else
354 if test "x$PCLS" = xt ; then
355 command="$command -pcls"
356 fi
357 fi
358 printf 'genmake ... ' 1>&2
359 $command > make.log 2>&1
360 RETVAL=$?
361 # Reduce the size of the testing emails!
362 head -100 Makefile > $CDIR/Makefile_head
363 if test "x$RETVAL" != x0 ; then
364 tail make.log
365 echo "genmakemodel: genmake failed" 1>&2
366 cp genmake_* make.log $CDIR
367 return 1
368 else
369 echo "successful" 1>&2
370 fi
371 )
372 fi
373 }
374
375 makeclean()
376 {
377 # makeclean directory
378 if test "x$NOCLEAN" = xt ; then
379 echo "make Clean skipped!"
380 else
381 (
382 cd $1;
383 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
384 if test -r Makefile ; then
385 printf 'clean build-dir: make Clean ... ' 2>&1
386 $MAKE Clean >> make.log 2>&1
387 RETVAL=$?
388 if test "x$RETVAL" != x0 ; then
389 tail make.log
390 echo "makeclean: \"make Clean\" failed" 1>&2
391 cp make.log $CDIR"/make.log"
392 return 1
393 fi
394 fi
395 echo successful 1>&2
396 exit 0
397 )
398 fi
399 }
400
401 run_clean()
402 {
403 # run_clean directory
404 if test "x$NOCLEAN" = xt ; then
405 echo "run_clean skipped!"
406 else
407 (
408 cd $1;
409 printf 'clean run-dir ... ' 2>&1
410 # part of what is done after "make clean" when doing "make CLEAN"
411 find . -name "*.meta" -exec rm {} \;
412 find . -name "*.data" -exec rm {} \;
413 find . -name "fort.*" -exec rm {} \;
414 find . -type l -exec rm {} \;
415 rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime
416 rm -rf mnc_test_*
417 echo successful 1>&2
418 exit 0
419 )
420 fi
421 }
422
423 makedependmodel()
424 {
425 # makedependmodel directory
426 if test "x$NODEPEND" = xt ; then
427 echo "make depend skipped!"
428 else
429 (
430 cd $1;
431 printf 'make depend ... ' 1>&2
432 $MAKE depend >> make.log 2>&1
433 RETVAL=$?
434 if test "x$RETVAL" != x0 ; then
435 tail make.log
436 echo "makedependmodel: make depend failed" 1>&2
437 cp make.log $CDIR"/make.log"
438 return 1
439 else
440 echo successful 1>&2
441 fi
442 )
443 fi
444 }
445
446 makemodel()
447 {
448 # makemodel directory
449 (
450 cd $1;
451 if test -r Makefile ; then
452 printf 'make ... ' 1>&2
453 if test "x$ADM" = x ; then
454 if test "x$JOBS" = x ; then
455 $MAKE >> make.log 2>&1
456 else
457 $MAKE -j $JOBS >> make.log 2>&1
458 fi
459 else
460 $MAKE adall >> make.log 2>&1
461 fi
462 RETVAL=$?
463 if test "x$RETVAL" != x0 ; then
464 tail make.log
465 echo failed 1>&2
466 cp make.log $CDIR"/make.log"
467 return 1
468 else
469 echo successful 1>&2
470 fi
471 fi
472 )
473 }
474
475 symlink_mpifiles()
476 {
477 # Put special links so that MPI specific files are used
478 # This MUST be invoked between makeclean and makelinks because
479 # the Makefile will link to non-mpi files by default
480
481 dir=$1
482 code_dir=$2
483 BUILD_DIR=$dir/$3
484 CODE_DIR=$dir/$code_dir
485
486 # These are files that should replace their counter-part when using -mpi
487 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
488
489 # Is this an MPI run?
490 if test "x$MPI" = xt ; then
491 # YES: We symbolically link these files to the build
492 # dir so long as there is no real file in place
493 for ii in $MPI_FILES ; do
494 i=`echo $ii | sed 's:^\./::'`
495 name=`echo $i | sed 's:_mpi::' `
496 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
497 RETVAL=$?
498 if test "x$RETVAL" != x0 ; then
499 if ! test -f $BUILD_DIR/$i ; then
500 #echo Linking $name to $i
501 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
502 fi
503 fi
504 done
505 else
506 # NO: We undo any _mpi symbolically linked files
507 for ii in $MPI_FILES ; do
508 i=`echo $ii | sed 's:^\./::'`
509 name=`echo $i | sed 's:_mpi::' `
510 if test -L $BUILD_DIR/$name ; then
511 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
512 RETVAL=$?
513 if test "x$RETVAL" = x0 ; then
514 #echo Un-linking $name from $linktarg
515 rm -f $BUILD_DIR/$name
516 fi
517 fi
518 done
519 fi
520
521 }
522
523 linkdata()
524 {
525 # linkdata run_dir input_dir_1 input_dir_2 ...
526 #
527 # symbolically link data files to run directory
528 if test -d $1 ; then
529 (
530 cd $1 ; shift
531 if test -r "../"$1"/eedata.mth" ; then
532 # found eedata.mth in 1rst input dir and it is readable
533 if test "x$MULTI_THREAD" = "xt" ; then
534 # multi-threaded test: remove symbolic link & link eedata.mth
535 if test -h eedata ; then rm -f eedata ; fi
536 if test ! -r eedata ; then
537 ln -sf "../"$1"/eedata.mth" eedata ;
538 printf 'eedata.mth ' 1>&2
539 fi
540 else
541 # not multi-threaded test: remove eedata symbolic link
542 if test -h eedata ; then rm -f eedata ; fi
543 fi
544 fi
545 for ldir in $* ; do
546 if test -d "../"$ldir ; then
547 printf 'ldir='${ldir} 1>&2
548 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
549 for i in $files ; do
550 if test ! -d "../"$ldir/$i ; then
551 if test ! -r $i ; then
552 printf ' '$i 1>&2
553 ln -sf "../"$ldir"/"$i $i
554 fi
555 fi
556 done
557 if test -x "../"$ldir"/"prepare_run ; then
558 "../"$ldir"/"prepare_run
559 fi
560 printf ' ; ' 1>&2
561 fi
562 done
563 )
564 fi
565 }
566
567 runmodel()
568 {
569 # runmodel directory
570 #
571 # runs "$COMMAND in "directory"
572 # (where "$COMMAND" is relative to "directory")
573 (
574 cd $1
575 printf 'runmodel in %s ...' $1 1>&2
576 # make output.txt
577 echo
578 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
579 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00
580 ln -sf "../"$builddir"/"$EXECUTABLE .
581 fi
582 if test ! -x $EXECUTABLE ; then
583 rm -f run.log ; touch run.log
584 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
585 echo " no executable:" $EXECUTABLE >> run.log
586 RETVAL=8
587 ENDVAL=-1
588 else
589 if test $OUTPUTFILE -ot $EXECUTABLE ; then
590 rm -f run.log ; touch run.log
591 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
592 ( eval $COMMAND ) >> run.log 2>&1
593 RETVAL=$?
594 else
595 RETVAL=0
596 if test -f run.log ; then
597 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
598 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
599 else
600 touch run.log
601 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
602 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
603 echo " no previous run.log: assume NORMAL END" >> run.log 2>&1
604 fi
605 fi
606 ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'`
607 fi
608 rm -f run.log_00
609 #if test "x$RETVAL" = x0 ; then
610 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
611 tail run.log
612 echo successful 1>&2
613 # === Reduce the size of the testing emails!
614 #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE
615 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
616 return 0
617 else
618 tail run.log
619 echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2
620 cp run.log $CDIR"/run.log"
621 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
622 return 1
623 fi
624 )
625 }
626
627 createcodelet()
628 {
629 # create codelet for comparing model output
630
631 printf "creating the comparison code... "
632 cat > tr_cmpnum.c <<EOF
633 #include <stdio.h>
634 #include <math.h>
635 int main( int argc, char** argv ) {
636 int linnum,cmplin,best,lncnt;
637 double a,b,abave,relerr;
638 best = -22;
639 lncnt = 0;
640 while( 1 & (lncnt+=1) < 999 ) {
641 scanf("%d", &linnum);
642 if (linnum == -1) break;
643 scanf("%lf", &a); scanf("%lf", &b);
644 abave = 0.5*(fabs(a)+fabs(b));
645 if ( abave == abave ) {
646 if (abave > 0.0) {
647 relerr=fabs(a-b)/abave;
648 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
649 else { cmplin = -16 ; }
650 best = (best > cmplin) ? best : cmplin; }
651 else { cmplin = -22 ; }
652 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
653 }
654 else {
655 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
656 break; }
657 }
658 if (lncnt == 999) best=-29;
659 if (linnum != -1) best=-99;
660 printf("%d\n", -best);
661 return 0;
662 }
663 EOF
664 $CC -o tr_cmpnum tr_cmpnum.c -lm
665
666 if [ -x ./tr_cmpnum ]; then
667 echo "OK"
668 return 0
669 else
670 echo
671 echo "ERROR: failed to compile comparison code -- please specify"
672 echo " a C compiler using the CC environment variable."
673 exit 1
674 fi
675 }
676
677 formatresults()
678 {
679 # formatresults expt genmake depend make run results*
680
681 nm=$1
682 printf '%s %s %s %s' $2 $3 $4 $5
683 shift; shift; shift; shift; shift;
684 listPrt=$@
685 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
686 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
687 printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
688 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > / /' | sed 's/ < / /'
689
690 if [ $xx = '..' ]; then
691 printf ' N/O '
692 elif [ $xx = '--' ]; then
693 printf ' N/O '
694 elif [ $xx = 99 ]; then
695 printf ' N/O '
696 else
697 if [ $xx -ge $MATCH_CRIT ]; then
698 printf ' pass'
699 else
700 printf ' FAIL'
701 fi
702 fi
703 printf ' %s' $nm
704 printf '\n'
705
706 }
707
708 scandirs()
709 {
710 if [ $# -eq 1 ]; then
711 for arg in * ; do
712 test -d $arg/$1 && echo $arg
713 done
714 else
715 echo $*
716 fi
717 }
718
719
720 ###############################################################################
721
722
723 # Default properties
724 debug=0
725 verbose=1
726 clean=0
727 expts=''
728 # ieee=1
729
730 IEEE=true
731 if test "x$MITGCM_IEEE" != x ; then
732 IEEE=$MITGCM_IEEE
733 fi
734
735
736 CLEANUP=f
737 QUICK=f
738 NOGENMAKE=f
739 NOCLEAN=f
740 NODEPEND=f
741 POSTCLEAN=f
742
743 BASH=
744 OPTFILE=NONE
745 ADDRESSES=
746 TESTDIRS=
747 SKIPDIRS=
748 MPACKDIR="../tools/mpack-1.6"
749 HAVE_MPACK=
750 MPACK="$MPACKDIR/mpack"
751 COMMAND=
752 if test "x$MAKE" = x ; then
753 MAKE=make
754 fi
755 if test "x$CC" = x ; then
756 CC=cc
757 fi
758 JOBS=
759 MPI=f
760 MULTI_THREAD=f
761 OUTDIR=
762 DELDIR=
763
764 ADM=
765
766 # Additional monitor types
767 PTRACERS_NUM="1 2 3 4 5"
768
769 MATCH_CRIT=13
770
771 printf "parsing options... "
772
773 ac_prev=
774 for ac_option ; do
775
776 # If the previous option needs an argument, assign it.
777 if test -n "$ac_prev"; then
778 eval "$ac_prev=\$ac_option"
779 ac_prev=
780 continue
781 fi
782
783 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
784
785 case $ac_option in
786
787 -help | --help | -h | --h)
788 usage ;;
789
790 -optfile | --optfile | -of | --of)
791 ac_prev=OPTFILE ;;
792 -optfile=* | --optfile=* | -of=* | --of=*)
793 OPTFILE=$ac_optarg ;;
794
795 -addr | --addr | -a | --a)
796 ac_prev=ADDRESSES ;;
797 -addr=* | --addr=*)
798 ADDRESSES=$ac_optarg ;;
799
800 -tdir | --tdir | -t | --t)
801 ac_prev=TESTDIRS ;;
802 -tdir=* | --tdir=*)
803 TESTDIRS=$ac_optarg ;;
804
805 -skipdir | --skipdir | -skd | --skd)
806 ac_prev=SKIPDIRS ;;
807 -skipdir=* | --skipdir=*)
808 SKIPDIRS=$ac_optarg ;;
809
810 -bash | --bash | -b | --b)
811 ac_prev=BASH ;;
812 -bash=* | --bash=*)
813 BASH=$ac_optarg ;;
814
815 -command | --command | -c | --c)
816 ac_prev=COMMAND ;;
817 -command=* | --command=*)
818 COMMAND=$ac_optarg ;;
819
820 -make | --make | -m | --m)
821 ac_prev=MAKE ;;
822 -make=* | --make=*)
823 MAKE=$ac_optarg ;;
824
825 -odir | --odir)
826 ac_prev=OUTDIR ;;
827 -odir=* | --odir=*)
828 OUTDIR=$ac_optarg ;;
829
830 -ptracers | --ptracers | -ptr | --ptr)
831 ac_prev=PTRACERS_NUM ;;
832 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
833 PTRACERS_NUM=$ac_optarg ;;
834
835 -match | --match ) ac_prev=MATCH_CRIT ;;
836 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
837
838 -j) ac_prev=JOBS ;;
839 -j=*) JOBS=$ac_optarg ;;
840
841 -clean | --clean)
842 CLEANUP=t ; DELDIR=t ;;
843
844 -quick | --quick | -q | --q)
845 QUICK=t ;;
846 -nogenmake | --nogenmake | -ng | --ng)
847 NOGENMAKE=t ;;
848 -noclean | --noclean | -nc | --nc)
849 NOCLEAN=t ;;
850 -nodepend | --nodepend | -nd | --nd)
851 NODEPEND=t ;;
852
853 -postclean | --postclean | -pc | --pc)
854 POSTCLEAN=t ;;
855
856 -mpi) MPI=t ;;
857
858 -mth) MULTI_THREAD=t ;;
859
860 -adm | -ad) ADM=t ;;
861
862 -ieee) IEEE=true ;;
863 -noieee) IEEE= ;;
864
865 -verbose) verbose=2 ;;
866 -debug) debug=1 ;;
867 -quiet) verbose=0 ;;
868
869 -deldir | -dd) DELDIR=t ;;
870
871 -ts) TS=t;;
872
873 -papis) PAPIS=t;;
874
875 -pcls) PCL=t;;
876
877 -*)
878 echo "Error: unrecognized option: "$ac_option
879 usage
880 ;;
881
882 *)
883 echo "Error: unrecognized argument: "$ac_option
884 usage
885 ;;
886
887 esac
888
889 done
890
891 if test "x$QUICK" = xt ; then
892 NOGENMAKE=t
893 NOCLEAN=t
894 NODEPEND=t
895 fi
896
897 if test "x$TESTDIRS" = x ; then
898 if test "x$ADM" = xt ; then
899 LIST=`scandirs results_ad`
900 else
901 LIST=`scandirs results`
902 fi
903 else
904 #- expand group of experiments:
905 LIST=" "
906 for xx in $TESTDIRS
907 do
908 case $xx in
909 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
910 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
911 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
912 ;;
913 'tutorials')
914 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
915 *) LIST=${LIST}" "$xx ;;
916 esac
917 done
918 fi
919 #echo 'LIST='${LIST}'<'
920 #- skip dirs, remove duplicate and non-directory:
921 TESTDIRS=" "
922 count=0
923 for xx in $LIST
924 do
925 yy=`echo $SKIPDIRS | grep -c $xx`
926 if test $yy = 0 ; then
927 if test -d $xx ; then
928 yy=`echo $TESTDIRS | grep -c $xx`
929 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
930 else count=1 ;
931 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
932 fi
933 else
934 if test $count = 1 ; then echo -n ", \"$xx\""
935 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
936 fi
937 fi
938 done
939 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
940 #echo 'TESTDIRS='${TESTDIRS}'<'
941
942 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
943 OPTFILE=$MITGCM_OF
944 fi
945
946 if test "x$ADM" = xt ; then
947 EXECUTABLE="mitgcmuv_ad"
948 OUTPUTFILE="output_adm.txt"
949 else
950 EXECUTABLE="mitgcmuv"
951 OUTPUTFILE="output.txt"
952 fi
953
954 if test "x$COMMAND" = x ; then
955 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
956 fi
957 if test "x$MPI" = xt ; then
958 OUTPUTFILE="STDOUT.0000"
959 fi
960
961 #echo "OK"
962 echo "OK (COMMAND= $COMMAND )"
963
964 # set the Default List of output variables to be checked:
965 # (use default or load experiment-specific list from file "tr_checklist")
966 # content : 1rst = main variable used to decide if it pass or FAIL
967 # others = number of matching digits to be printed in summary.txt
968 if test "x$ADM" != xt ; then
969 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
970 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
971 nbDef=`echo $DEF_CHECK_LIST | awk '{print NF-1+3*gsub("+","E")}'`
972 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
973 EMPTY_RESULTS=$EMPTY_RESULTS`expr $nbDef - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
974 fi
975
976 # create the FORTRAN comparison code
977 createcodelet
978
979 # build the mpack utility
980 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
981 echo "skipping mpack build"
982 else
983 build_mpack
984 fi
985
986 # Create a uniquely named directory to store results
987 MACH=`hostname`
988 UNAMEA=`uname -a`
989 DATE=`date +%Y%m%d`
990 BASE="tr_"$MACH"_"$DATE"_"
991 if test "x$OUTDIR" != x ; then
992 BASE="tr_"$OUTDIR"_"$DATE"_"
993 fi
994 DNUM=0
995 DRESULTS="$BASE$DNUM"
996 while test -e $DRESULTS ; do
997 DNUM=$(( $DNUM + 1 ))
998 DRESULTS="$BASE$DNUM"
999 done
1000 mkdir $DRESULTS
1001 RETVAL=$?
1002 if test "x$RETVAL" != x0 ; then
1003 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1004 exit 1
1005 fi
1006 SUMMARY="$DRESULTS/summary.txt"
1007 printf "Start time: " >> $SUMMARY
1008 start_date=`date`
1009 echo $start_date > $SUMMARY
1010
1011 of_path=
1012 if test "x$OPTFILE" != xNONE ; then
1013 if test -r $OPTFILE ; then
1014 # get the path
1015 path=${OPTFILE%/*}
1016 if test "x$path" = x ; then
1017 of_path=`pwd`
1018 else
1019 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1020 fi
1021 file=${OPTFILE##*/}
1022 OPTFILE=$of_path/$file
1023 cp $OPTFILE $DRESULTS
1024 echo >> $SUMMARY
1025 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1026 else
1027 echo | tee $SUMMARY
1028 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1029 exit 1
1030 fi
1031 else
1032 echo >> $SUMMARY
1033 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
1034 echo " so the genmake default will be used." >> $SUMMARY
1035 fi
1036 echo
1037 echo >> $SUMMARY
1038 if test "x$ADM" = x ; then
1039 if [ $MATCH_CRIT -lt 10 ] ;
1040 then line_0="default "$MATCH_CRIT ;
1041 else line_0="default "$MATCH_CRIT ; fi
1042 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1043 # line_0=" ----T----- ----S----- ----U----- ----V-----"
1044 line_1="G D M c m s m s m s m s"
1045 line_2="E p a R g m m e . m m e . m m e . m m e ."
1046 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
1047 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1048 for ii in $PTRACERS_NUM ; do
1049 # tst=`eval 'echo $HAVE_PTR0'$ii`
1050 # if test "x$tst" = xt ; then
1051 line_0="$line_0 --PTR 0"$ii"--"
1052 line_1="$line_1 m s"
1053 line_2="$line_2 m m e ."
1054 line_3="$line_3 i a a d"
1055 line_4="$line_4 n x n ."
1056 # fi
1057 done
1058 echo "$line_0" | tee -a $SUMMARY
1059 echo "$line_1" | tee -a $SUMMARY
1060 echo "$line_2" | tee -a $SUMMARY
1061 echo "$line_3" | tee -a $SUMMARY
1062 echo "$line_4" | tee -a $SUMMARY
1063 echo " " | tee -a $SUMMARY
1064 else
1065 echo "ADJOINT=true" >> $SUMMARY
1066 echo >> $SUMMARY
1067 cat << EOF | tee -a $SUMMARY
1068 G D M C G
1069 E p a R o r
1070 N n k u s a
1071 2 d e n t d
1072
1073 EOF
1074 fi
1075
1076 # ...and each test directory...
1077 for dir in $TESTDIRS ; do
1078
1079 # Cleanup only!
1080 if test "x$CLEANUP" = xt ; then
1081 if test -r $dir/build/Makefile ; then
1082 echo ' ------ clean dir:' $dir/build
1083 ( cd $dir/build ; make CLEAN )
1084 fi
1085 if test -d $dir/run/CVS ; then
1086 echo ' ------ clean dir:' $dir/run
1087 run_clean $dir/run
1088 fi
1089 (
1090 cd $dir
1091 rm -rf tr_run.*
1092 )
1093 continue
1094 fi
1095
1096 # Verify that the testdir exists and contains previous
1097 # results in the correct location--or skip this directory!
1098 fout=
1099 if test "x$ADM" = x ; then
1100 fout=$dir"/results/output.txt"
1101 else
1102 fout=$dir"/results_ad/output_adm.txt"
1103 fi
1104 if test ! -r $fout ; then
1105 echo "can't read \"$fout\" -- skipping $dir"
1106 continue
1107 fi
1108 if test "x$ADM" = x ; then
1109 check_for_add_mon_output $fout
1110 fi
1111
1112 # Check for additional types of monitor output
1113
1114 builddir="build"
1115 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1116 rundir="run"
1117 #rundir=$builddir
1118 if test ! -d $dir/$rundir ; then
1119 rundir=$builddir
1120 fi
1121
1122 if test "x$ADM" = x ; then
1123 code_dir=code
1124 CODE_DIR=$dir/code
1125 input_dirs='input'
1126 else
1127 code_dir=code_ad
1128 CODE_DIR=$dir/code_ad
1129 input_dirs='input_ad input'
1130 fi
1131 BUILD_DIR=$dir/$builddir
1132
1133 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
1134 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1135 continue
1136 fi
1137 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1138 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1139 continue
1140 fi
1141
1142 # Check whether there are "extra runs" for this testdir
1143 extra_runs=
1144 if test "x$ADM" = x ; then
1145 ex_run_dirs=`( cd $dir ; echo input.* )`
1146 #echo "ex_run_dirs='$ex_run_dirs'"
1147 for exd in $ex_run_dirs ; do
1148 name=`echo $exd | sed -e 's/input.//g'`
1149 outf="$dir/results/output.$name.txt"
1150 if test -f $outf -a -r $outf ; then
1151 if test "x$MULTI_THREAD" = "xt" ; then
1152 if test -r $dir"/"$exd"/eedata.mth" ; then
1153 extra_runs="$extra_runs $name"
1154 #else echo $dir"/"$exd"/eedata.mth: not found"
1155 fi
1156 else
1157 extra_runs="$extra_runs $name"
1158 fi
1159 fi
1160 done
1161 fi
1162
1163 echo "-------------------------------------------------------------------------------"
1164 echo
1165 if test "x$extra_runs" = "x" ; then
1166 echo "Experiment: $dir"
1167 else
1168 echo "Experiment: $dir ; extra_runs=$extra_runs"
1169 fi
1170 echo
1171 unset genmake makedepend make run
1172 results=$EMPTY_RESULTS
1173
1174 # Create an output dir for each OPTFILE/tdir combination
1175 rel_CDIR=$DRESULTS"/"$dir
1176 mkdir $rel_CDIR
1177 CDIR=`pwd`"/$rel_CDIR"
1178
1179 if test "x$CLEANUP" = xt ; then
1180 echo '====>>> this is to check that we never go through this part <<< ==='
1181 makeclean $dir/$builddir \
1182 && run_clean $dir/$rundir
1183 else
1184 genmakemodel $dir/$builddir && genmake=Y \
1185 && makeclean $dir/$builddir \
1186 && run_clean $dir/$rundir \
1187 && symlink_mpifiles $dir $code_dir $builddir \
1188 && makedependmodel $dir/$builddir && makedepend=Y \
1189 && makemodel $dir/$builddir && make=Y \
1190 && linkdata $dir/$rundir $input_dirs \
1191 && runmodel $dir/$rundir && run=Y \
1192 && results=`testoutput_run $dir $rundir "txt"`
1193 fi
1194
1195 echo
1196 if test "x$ADM" = x ; then
1197 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1198 echo
1199 echo "$fres" >> $SUMMARY
1200 touch $CDIR"/summary.txt"
1201 echo "fresults='$fres'" >> $CDIR"/summary.txt"
1202 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1203 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1204 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1205 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1206
1207 for ex in $extra_runs ; do
1208 unset run
1209 results=$EMPTY_RESULTS
1210 # Create an output dir for each OPTFILE/tdir.ex combination
1211 rel_CDIR=$DRESULTS"/"$dir"."$ex
1212 mkdir $rel_CDIR
1213 CDIR=`pwd`"/$rel_CDIR"
1214 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
1215 run_clean $dir/tr_run.$ex
1216 linkdata $dir/tr_run.$ex input.$ex input
1217 runmodel $dir/tr_run.$ex && run=Y \
1218 && results=`testoutput_run $dir tr_run.$ex ${ex}".txt"`
1219 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
1220 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1221 fres="$fres.$ex"
1222 echo
1223 echo "$fres" >> $SUMMARY
1224 touch $CDIR"/summary.txt"
1225 echo "fresults='$fres'" >> $CDIR"/summary.txt"
1226 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1227 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1228 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1229 echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt"
1230 if test "x$POSTCLEAN" = xt ; then
1231 run_clean $dir/tr_run.$ex
1232 fi
1233 done
1234 else
1235 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
1236 fres=$fres"$results $dir"
1237 echo
1238 echo "$fres" >> $SUMMARY
1239 touch $CDIR"/summary.txt"
1240 echo "fresults='$fres'" >> $CDIR"/summary.txt"
1241 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1242 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1243 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1244 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1245 grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \
1246 >> $CDIR"/summary.txt"
1247 fi
1248
1249 #postclean $dir/$builddir
1250 if test "x$POSTCLEAN" = xt ; then
1251 makeclean $dir/$builddir \
1252 && run_clean $dir/$rundir
1253 fi
1254
1255 echo "-------------------------------------------------------------------------------"
1256
1257 done
1258
1259 printf "Start time: " >> $SUMMARY
1260 echo $start_date >> $SUMMARY
1261 printf "End time: " >> $SUMMARY
1262 date >> $SUMMARY
1263
1264 # If addresses were supplied and mpack built successfully, then try
1265 # to send email using mpack.
1266 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1267 echo "No results email was sent."
1268 else
1269 if test "x$HAVE_MPACK" = xt ; then
1270 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1271 && gzip $DRESULTS".tar" \
1272 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1273 RETVAL=$?
1274 if test "x$RETVAL" != x0 ; then
1275 echo
1276 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1277 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1278 echo " summary of results from the directory \"$DRESULTS\"."
1279 echo
1280 else
1281 echo
1282 echo "An email containing results was sent to the following addresses:"
1283 echo " \"$ADDRESSES\""
1284 echo
1285 fi
1286 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1287 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1288 fi
1289 fi
1290
1291 rm -f tr_cmpnum.c tr_cmpnum
1292
1293 if test "x$CLEANUP" != xt ; then
1294 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \.//'
1295 # cat $SUMMARY | sed 's/ \.//g'
1296 if test -e tr_out.txt ; then
1297 mv tr_out.txt tr_out.txt.old
1298 fi
1299 cat $SUMMARY | sed 's/ \.//g' > tr_out.txt
1300 fi
1301
1302 if test "x$DELDIR" = xt ; then
1303 rm -rf $DRESULTS
1304 fi

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