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Revision 1.63 - (show annotations) (download)
Wed Jan 26 00:24:06 2005 UTC (15 years, 4 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint57c_pre, checkpoint57c_post
Changes since 1.62: +2 -2 lines
title fix (do ln -s of just *.[fFhoc] instead of *.[fFhoc]* )

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.62 2005/01/25 22:41:05 edhill Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mpi) use MPI input files"
15 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
16 echo " (DEF=\"-ieee\")"
17 echo " (-optfile=|-of=)STRING list of optfiles to use"
18 echo " (-a|-addr) STRING list of email recipients"
19 echo " (DEF=\"edhill@mitgcm.org\")"
20 echo " (-t|-tdir) STRING list of test dirs to use"
21 echo " (DEF=\"\" which builds all)"
22 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
23 echo " Bourne-compatible \"sh\" shell"
24 echo " (DEF=\"\" for \"bash\")"
25 echo " (-adm|-ad) perform an adjoint run"
26 echo " (-command) STRING command to run"
27 echo " (DEF=\"make output.txt\")"
28 echo " (-m|-make) STRING command to use for \"make\""
29 echo " (DEF=\"make\")"
30 echo " (-ptracers|-ptr) STRING specify which ptracers to test"
31 echo " (DEF=\"1 2 3 4 5\")"
32 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
33 echo " (-clean) *ONLY* run \"make CLEAN\""
34 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
35 echo " (-nogenmake|-ng) skip the genmake stage"
36 echo " (-noclean|-nc) skip the \"make clean\" stage"
37 echo " (-nodepend|-nd) skip the \"make depend\" stage"
38 echo " (-deldir|-dd) on success, delete the output directory"
39 echo
40 echo "and where STRING can be a whitespace-delimited list"
41 echo "such as:"
42 echo
43 echo " -t 'exp0 exp2 exp3' "
44 echo " -addr='abc@123.com testing@home.org'"
45 echo
46 echo "provided that the expression is properly quoted within the current"
47 echo "shell (note the use of single quotes to protect white space)."
48 echo
49 exit 1
50 }
51
52 # build the mpack utility
53 build_mpack()
54 {
55 printf "building the mpack utility... "
56 if test ! -x "$MPACKDIR/mpack" ; then
57 if test ! -d $MPACKDIR ; then
58 echo
59 echo "Error: can't find \"$MPACKDIR\""
60 echo " are you sure this program is being run in the correct "
61 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
62 echo
63 HAVE_MPACK=f
64 fi
65 printf "building mpack... "
66 if test "x$CC" = x ; then
67 export CC=cc
68 fi
69 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
70 RETVAL=$?
71 if test "x$RETVAL" != x0 ; then
72 echo
73 echo "Error building the mpack tools at: $MPACK_DIR"
74 echo
75 HAVE_MPACK=f
76 else
77 rm -f tr_build_mpack.out
78 HAVE_MPACK=t
79 fi
80 else
81 HAVE_MPACK=t
82 fi
83 echo "OK"
84 }
85
86 testoutput_for_prop()
87 {
88 # testoutput_for_prop dir s1 label subdir extension
89 #
90 # compares files in $dir/$subdir/output.txt and $dir/results/output.txt
91 # using search strings s1 and text label
92
93 if [ $debug -gt 0 ]; then
94 echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2
95 fi
96 if [ -r $1/$4/output.txt ]; then
97 grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt
98 lncnt=`wc -l tmp1.txt | awk '{print $1}' `
99 if [ $lncnt -lt 3 ]; then
100 if [ $verbose -gt 0 ]; then
101 echo Not enough lines of output when searching for "$2" 1>&2
102 fi
103 return 99
104 fi
105 else
106 echo testoutput_for_prop: output.txt from model run was not readable 1>&2
107 return 99
108 fi
109 if [ $debug -gt 0 ]; then
110 echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2
111 fi
112 grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt
113 lncnt=`wc -l tmp2.txt | awk '{print $1}' `
114 if [ $lncnt -lt 3 ]; then
115 if [ $verbose -gt 0 ]; then
116 echo Not enough lines of output when searching for "$2" 1>&2
117 fi
118 return 99
119 fi
120 if [ $debug -gt 0 ]; then
121 echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2
122 fi
123 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
124 if [ $debug -gt 0 ]; then
125 echo testoutput_for_prop: compare_lines 1>&2
126 fi
127 if [ $verbose -gt 1 ]; then
128 cat tmp3.txt 1>&2
129 fi
130 echo "-1" >> tmp3.txt
131 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
132 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
133 digits_of_similarity=`./tmp_cmpnum < tmp4.txt`
134 if [ $digits_of_similarity -eq 99 ]; then
135 if [ $verbose -gt 0 ]; then
136 echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2
137 fi
138 digits_of_similarity=99
139 else
140 if [ $verbose -gt 0 ]; then
141 echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2
142 fi
143 fi
144 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
145
146 return $digits_of_similarity
147 }
148
149 dashnum()
150 {
151 # dashnum n1 n2 n3 ...
152 #
153 # print numbers using %3i format or "--" if number = 99
154
155 for num in $@ ; do
156 if [ $num = 99 ]; then
157 printf ' --'
158 else
159 printf '%3i' $num
160 fi
161 done
162 }
163
164 testoutput_ad()
165 {
166 grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt
167 grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt
168 grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt
169 grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt
170 join t05.txt t15.txt > t5.txt
171 join t06.txt t16.txt > t6.txt
172 echo "-1" >> t5.txt
173 echo "-1" >> t6.txt
174 digits_5=`./tmp_cmpnum < t5.txt`
175 digits_6=`./tmp_cmpnum < t6.txt`
176 dashnum $digits_5 $digits_6
177 rm -f t[01][56].txt t[56].txt
178 }
179
180 check_for_add_mon_output()
181 {
182 # Check for additional types of monitor output
183 if test "x$1" = x ; then
184 return
185 fi
186
187 for ii in $PTRACERS_NUM ; do
188 eval "HAVE_PTR0"$ii"=f"
189 done
190
191 ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max"
192 ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
193 for ii in $PTRACERS_NUM ; do
194 for jj in $ptr_add ; do
195 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
196 tst=`grep $name $1 | wc -l | awk '{print $1}'`
197 if test ! "x$tst" = x0 ; then
198 eval "HAVE_PTR0"$ii"=t"
199 fi
200 done
201 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"'
202 done
203 }
204
205 testoutput()
206 {
207 # testoutput directory subdir extension
208 #
209 # test output in "directory"
210 if test "x$ADM" = x ; then
211 if [ $debug -gt 0 ]; then
212 echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2
213 fi
214 testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$?
215 if [ $debug -gt 0 ]; then
216 echo testoutput: cg2dres=$cg2dres 1>&2
217 fi
218 testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$?
219 testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$?
220 testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$?
221 testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$?
222 testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$?
223 testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$?
224 testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$?
225 testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$?
226 testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$?
227 testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$?
228 testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$?
229 testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$?
230 testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$?
231 testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$?
232 testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$?
233 testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$?
234
235 # This is for PTRACERS
236 for ii in $PTRACERS_NUM ; do
237 eval `echo "p0"$ii"_min=99"`
238 eval `echo "p0"$ii"_max=99"`
239 eval `echo "p0"$ii"_mean=99"`
240 eval `echo "p0"$ii"_sd=99"`
241 tst=`eval 'echo "$HAVE_PTR0'$ii'"'`
242 #echo 'tst = '$tst
243 if test "x$tst" = xt ; then
244 a="trcstat_ptracer0"
245 testoutput_for_prop $1 "$a"$ii"_min" "p0"$ii"_min" $2 $3
246 RETVAL=$? ; eval `echo "p0"$ii"_min="$RETVAL`
247 testoutput_for_prop $1 "$a"$ii"_max" "p0"$ii"_max" $2 $3
248 RETVAL=$? ; eval `echo "p0"$ii"_max="$RETVAL`
249 testoutput_for_prop $1 "$a"$ii"_mean" "p0"$ii"_mean" $2 $3
250 RETVAL=$? ; eval `echo "p0"$ii"_mean="$RETVAL`
251 testoutput_for_prop $1 "$a"$ii"_sd" "p0"$ii"_sd" $2 $3
252 RETVAL=$? ; eval `echo "p0"$ii"_sd="$RETVAL`
253 fi
254 done
255
256 allargs="$cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd"
257 allargs="$allargs $umin $umax $umean $usd $vmin $vmax $vmean $vsd"
258 allargs="$allargs $p01_min $p01_max $p01_mean $p01_sd"
259 allargs="$allargs $p02_min $p02_max $p02_mean $p02_sd"
260 allargs="$allargs $p03_min $p03_max $p03_mean $p03_sd"
261 allargs="$allargs $p04_min $p04_max $p04_mean $p04_sd"
262 allargs="$allargs $p05_min $p05_max $p05_mean $p05_sd"
263
264 eval "dashnum $allargs"
265
266 else
267 testoutput_ad $1 $2 "precision_grdchk_result"
268 fi
269 }
270
271 genmakemodel()
272 {
273 # genmakemodel directory
274 if test "x$NOGENMAKE" = xt ; then
275 echo "genmake skipped!"
276 else
277 if test "x$BASH" = x ; then
278 GENMAKE2="../../../tools/genmake2"
279 else
280 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
281 fi
282 (
283 cd $1;
284 command="$GENMAKE2 -ds -m $MAKE"
285 if test "x$ADM" = x ; then
286 command="$command --mods=../code"
287 else
288 command="$command --mods=../code_ad"
289 command="$command -adof=../../../tools/adjoint_options/adjoint_staf"
290 fi
291 if test "x$OPTFILE" != xNONE ; then
292 command="$command --optfile=$OPTFILE"
293 fi
294 if test "x$IEEE" != x ; then
295 command="$command -ieee"
296 fi
297 printf 'genmake ... ' 1>&2
298 $command > make.log 2>&1
299 RETVAL=$?
300 # Reduce the size of the testing emails!
301 head -100 Makefile > $CDIR/Makefile_head
302 if test "x$RETVAL" != x0 ; then
303 tail make.log
304 echo "genmakemodel: genmake failed" 1>&2
305 cp genmake_* make.log $CDIR
306 return 1
307 else
308 echo "successful" 1>&2
309 fi
310 )
311 fi
312 }
313
314 makeclean()
315 {
316 # makeclean directory
317 if test "x$NOCLEAN" = xt ; then
318 echo "make CLEAN skipped!"
319 else
320 (
321 cd $1;
322 if test -e output.txt ; then
323 rm -f output.txt
324 fi
325 printf 'make CLEAN ... ' 2>&1
326 if test -r Makefile ; then
327 $MAKE CLEAN >> make.log 2>&1
328 RETVAL=$?
329 if test "x$RETVAL" != x0 ; then
330 tail make.log
331 echo "makeclean: \"make CLEAN\" failed" 1>&2
332 cp make.log $CDIR"/make.log"
333 return 1
334 fi
335 fi
336 echo successful 1>&2
337 exit 0
338 )
339 fi
340 }
341
342 makedependmodel()
343 {
344 # makedependmodel directory
345 if test "x$NODEPEND" = xt ; then
346 echo "make depend skipped!"
347 else
348 (
349 cd $1;
350 printf 'make depend ... ' 1>&2
351 $MAKE depend >> make.log 2>&1
352 RETVAL=$?
353 if test "x$RETVAL" != x0 ; then
354 tail make.log
355 echo "makedependmodel: make depend failed" 1>&2
356 cp make.log $CDIR"/make.log"
357 return 1
358 else
359 echo successful 1>&2
360 fi
361 )
362 fi
363 }
364
365 makemodel()
366 {
367 # makemodel directory
368 (
369 cd $1;
370 if test -r Makefile ; then
371 printf 'make ... ' 1>&2
372 if test "x$ADM" = x ; then
373 if test "x$JOBS" = x ; then
374 $MAKE >> make.log 2>&1
375 else
376 $MAKE -j $JOBS >> make.log 2>&1
377 fi
378 else
379 $MAKE adall >> make.log 2>&1
380 fi
381 RETVAL=$?
382 if test "x$RETVAL" != x0 ; then
383 tail make.log
384 echo failed 1>&2
385 cp make.log $CDIR"/make.log"
386 return 1
387 else
388 echo successful 1>&2
389 fi
390 fi
391 )
392 }
393
394 symlink_mpifiles()
395 {
396 # Put special links so that MPI specific files are used
397 # This MUST be invoked between makeclean and makelinks because
398 # the Makefile will link to non-mpi files by default
399
400 dir=$1
401 code_dir=$2
402 BUILD_DIR=$dir/$3
403 CODE_DIR=$dir/$code_dir
404
405 # These are files that should replace their counter-part when using -mpi
406 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
407
408 # Is this an MPI run?
409 if test "x$MPI" = xt ; then
410 # YES: We symbolically link these files to the build
411 # dir so long as there is no real file in place
412 for ii in $MPI_FILES ; do
413 i=`echo $ii | sed 's:^\./::'`
414 name=`echo $i | sed 's:_mpi::' `
415 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
416 RETVAL=$?
417 if test "x$RETVAL" != x0 ; then
418 if ! test -f $BUILD_DIR/$i ; then
419 #echo Linking $name to $i
420 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
421 fi
422 fi
423 done
424 else
425 # NO: We undo any _mpi symbolically linked files
426 for ii in $MPI_FILES ; do
427 i=`echo $ii | sed 's:^\./::'`
428 name=`echo $i | sed 's:_mpi::' `
429 if test -L $BUILD_DIR/$name ; then
430 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
431 RETVAL=$?
432 if test "x$RETVAL" = x0 ; then
433 #echo Un-linking $name from $linktarg
434 rm -f $BUILD_DIR/$name
435 fi
436 fi
437 done
438 fi
439
440 }
441
442 linkdata()
443 {
444 # linkdata flag
445 #
446 # symbolically link data files to run directory
447 if test "x$1" = x1 ; then
448 (
449 cd $2
450 if test "x$ADM" = x ; then
451 files=`( cd ../input ; ls -1 | grep -v CVS )`
452 for i in $files ; do
453 if test ! -d "../input/"$i -a ! -f $i ; then
454 ln -sf "../input/"$i $i
455 fi
456 done
457 else
458 files=`( cd ../input ; ls -1 *.bin | grep -v CVS )`
459 for i in $files ; do
460 if test ! -d "../input/"$i ; then
461 ln -sf "../input/"$i $i
462 fi
463 done
464 files=`( cd ../input_ad ; ls -1 | grep -v CVS )`
465 for i in $files ; do
466 if test ! -d "../input_ad/"$i ; then
467 ln -sf "../input_ad/"$i $i
468 fi
469 done
470 fi
471 )
472 fi
473 }
474
475 runmodel()
476 {
477 # runmodel directory
478 #
479 # runs "$COMMAND in "directory"
480 # (where "$COMMAND" is relative to "directory")
481 (
482 cd $1
483 printf 'runmodel ... ' 1>&2
484 # make output.txt
485 echo
486 rm -f run.log
487 # echo "COMMAND='$COMMAND'"
488 # echo "pwd='"`pwd`"'"
489 ( eval $COMMAND ) > run.log 2>&1
490 RETVAL=$?
491 if test "x$RETVAL" = x0 ; then
492 tail run.log
493 echo successful 1>&2
494 # === Reduce the size of the testing emails!
495 # if test "x$ADM" = x ; then
496 # cp output.txt $CDIR"/output.txt"
497 # else
498 # cp output.txt_adm $CDIR"/output.txt_adm"
499 # fi
500 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
501 return 0
502 else
503 tail run.log
504 echo failed 1>&2
505 cp run.log $CDIR"/run.log"
506 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
507 return 1
508 fi
509 )
510 }
511
512 createcodelet()
513 {
514 # create codelet for comparing model output
515
516 printf "creating the comparison code... "
517 cat > tmp_cmpnum.c <<EOF
518 #include <stdio.h>
519 #include <math.h>
520 int main( int argc, char** argv ) {
521 int linnum,best,lncnt;
522 double a,b,abave,relerr;
523 best = -22;
524 lncnt = 0;
525 while( 1 & (lncnt+=1) < 999 ) {
526 scanf("%d", &linnum);
527 if (linnum == -1) break;
528 scanf("%lf", &a); scanf("%lf", &b);
529 abave = 0.5*(fabs(a)+fabs(b));
530 if (abave > 0.0) {
531 relerr=fabs(a-b)/abave;
532 if (relerr > 0.0) { linnum = (int)lrint(log10(relerr)); }
533 else { linnum = -16 ; }
534 best = (best > linnum) ? best : linnum;
535 }
536 }
537 if (lncnt == 999) best=-29;
538 printf("%d\n", -best);
539 return 0;
540 }
541 EOF
542 $CC -o tmp_cmpnum tmp_cmpnum.c -lm
543
544 if [ -x ./tmp_cmpnum ]; then
545 echo "OK"
546 return 0
547 else
548 echo
549 echo "ERROR: failed to compile comparison code -- please specify"
550 echo " a C compiler using the CC environment variable."
551 exit 1
552 fi
553 }
554
555 formatresults()
556 {
557 # formatresults expt genmake depend make run results*
558
559 nm=$1
560 printf '%s %s %s %s' $2 $3 $4 $5
561 shift; shift; shift; shift; shift;
562 printf '%3s' $@
563
564 if [ $1 = '--' ]; then
565 printf ' N/O '
566 else
567 if [ $1 -gt 12 ]; then
568 printf ' pass'
569 else
570 printf ' FAIL'
571 fi
572 fi
573 printf ' %s' $nm
574 printf '\n'
575
576 }
577
578 show_help()
579 {
580 cat - << EOF
581 $0 [-help] [-quick] [-verbose] dir1 [dir2] [...]
582
583 -help|-h Show this help message
584 -quiet Reduce the amount of output
585 -verbose Produce copious amounts of output
586 -debug Produce even more output which will mean nothing to most
587 -force Do "make CLEAN" before compiling. This forces a complete rebuild.
588 -clean Do "make CLEAN" after compiling and testing.
589 -cleanup Aggresively removes all model output, executables and object files
590 and then exits. Use with care.
591
592 Normal usage:
593 $0 * Configure, compile, run and analyze in all experiment directories
594 EOF
595 }
596
597 scandirs()
598 {
599 if [ $# -eq 0 ]; then
600 for arg in * ; do
601 test -d $arg/input && echo $arg
602 done
603 else
604 echo $*
605 fi
606 }
607
608
609 ###############################################################################
610
611
612 # Default properties
613 debug=0
614 verbose=1
615 clean=0
616 expts=''
617 # ieee=1
618
619 IEEE=true
620 if test "x$MITGCM_IEEE" != x ; then
621 IEEE=$MITGCM_IEEE
622 fi
623
624
625 CLEANUP=f
626 QUICK=f
627 NOGENMAKE=f
628 NOCLEAN=f
629 NODEPEND=f
630
631 BASH=
632 OPTFILE=NONE
633 ADDRESSES=
634 TESTDIRS=
635 MPACKDIR="../tools/mpack-1.6"
636 HAVE_MPACK=
637 MPACK="$MPACKDIR/mpack"
638 COMMAND=
639 if test "x$MAKE" = x ; then
640 MAKE=make
641 fi
642 if test "x$CC" = x ; then
643 CC=cc
644 fi
645 JOBS=
646 MPI=f
647 DELDIR=
648
649 ADM=
650
651 # Additional monitor types
652 PTRACERS_NUM="1 2 3 4 5"
653
654 printf "parsing options... "
655
656 ac_prev=
657 for ac_option ; do
658
659 # If the previous option needs an argument, assign it.
660 if test -n "$ac_prev"; then
661 eval "$ac_prev=\$ac_option"
662 ac_prev=
663 continue
664 fi
665
666 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
667
668 case $ac_option in
669
670 -help | --help | -h | --h)
671 usage ;;
672
673 -optfile | --optfile | -of | --of)
674 ac_prev=OPTFILE ;;
675 -optfile=* | --optfile=* | -of=* | --of=*)
676 OPTFILE=$ac_optarg ;;
677
678 -addr | --addr | -a | --a)
679 ac_prev=ADDRESSES ;;
680 -addr=* | --addr=*)
681 ADDRESSES=$ac_optarg ;;
682
683 -tdir | --tdir | -t | --t)
684 ac_prev=TESTDIRS ;;
685 -tdir=* | --tdir=*)
686 TESTDIRS=$ac_optarg ;;
687
688 -bash | --bash | -b | --b)
689 ac_prev=BASH ;;
690 -bash=* | --bash=*)
691 BASH=$ac_optarg ;;
692
693 -command | --command | -c | --c)
694 ac_prev=COMMAND ;;
695 -command=* | --command=*)
696 COMMAND=$ac_optarg ;;
697
698 -make | --make | -m | --m)
699 ac_prev=MAKE ;;
700 -make=* | --make=*)
701 MAKE=$ac_optarg ;;
702
703 -ptracers | --ptracers | -ptr | --ptr)
704 ac_prev=PTRACERS_NUM ;;
705 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
706 PTRACERS_NUM=$ac_optarg ;;
707
708 -j) ac_prev=JOBS ;;
709 -j=*) JOBS=$ac_optarg ;;
710
711 -clean | --clean)
712 CLEANUP=t ;;
713
714 -quick | --quick | -q | --q)
715 QUICK=t ;;
716 -nogenmake | --nogenmake | -ng | --ng)
717 NOGENMAKE=t ;;
718 -noclean | --noclean | -nc | --nc)
719 NOCLEAN=t ;;
720 -nodepend | --nodepend | -nd | --nd)
721 NODEPEND=t ;;
722
723 -mpi) MPI=t ;;
724
725 -adm | -ad) ADM=t ;;
726
727 -ieee) IEEE=true ;;
728 -noieee) IEEE= ;;
729
730 -verbose) verbose=2 ;;
731 -debug) debug=1 ;;
732 -quiet) verbose=0 ;;
733
734 -deldir | -dd) DELDIR=t ;;
735
736 -*)
737 echo "Error: unrecognized option: "$ac_option
738 usage
739 ;;
740
741 *)
742 echo "Error: unrecognized argument: "$ac_option
743 usage
744 ;;
745
746 esac
747
748 done
749
750 if test "x$QUICK" = xt ; then
751 NOGENMAKE=t
752 NOCLEAN=t
753 NODEPEND=t
754 fi
755
756 if test "x$TESTDIRS" = x ; then
757 TESTDIRS=`scandirs`
758 fi
759
760 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
761 OPTFILE=$MITGCM_OF
762 fi
763
764 if test "x$ADM" = xt -a "x$COMMAND" = x ; then
765 COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1"
766 fi
767
768 if test "x$COMMAND" = x ; then
769 COMMAND="$MAKE output.txt"
770 fi
771
772 echo "OK"
773
774 # create the FORTRAN comparison code
775 createcodelet
776
777 # build the mpack utility
778 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
779 echo "skipping mpack build"
780 else
781 build_mpack
782 fi
783
784 # Create a uniquely named directory to store results
785 MACH=`hostname`
786 UNAMEA=`uname -a`
787 DATE=`date +%Y%m%d`
788 BASE="tr_"$MACH"_"$DATE"_"
789 DNUM=0
790 DRESULTS="$BASE$DNUM"
791 while test -e $DRESULTS ; do
792 DNUM=$(( $DNUM + 1 ))
793 DRESULTS="$BASE$DNUM"
794 done
795 mkdir $DRESULTS
796 RETVAL=$?
797 if test "x$RETVAL" != x0 ; then
798 echo "ERROR: Can't create results directory \"./$DRESULTS\""
799 exit 1
800 fi
801 SUMMARY="$DRESULTS/summary.txt"
802 printf "Start time: " >> $SUMMARY
803 start_date=`date`
804 echo $start_date > $SUMMARY
805
806 of_path=
807 if test "x$OPTFILE" != xNONE ; then
808 if test -r $OPTFILE ; then
809 # get the path
810 path=${OPTFILE%/*}
811 if test "x$path" = x ; then
812 of_path=`pwd`
813 else
814 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
815 fi
816 file=${OPTFILE##*/}
817 OPTFILE=$of_path/$file
818 cp $OPTFILE $DRESULTS
819 echo >> $SUMMARY
820 echo " OPTFILE=$OPTFILE" >> $SUMMARY
821 else
822 echo | tee $SUMMARY
823 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
824 exit 1
825 fi
826 else
827 echo >> $SUMMARY
828 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
829 echo " so the genmake default will be used." >> $SUMMARY
830 fi
831 echo
832 echo >> $SUMMARY
833 if test "x$ADM" = x ; then
834 line_0=" ----T----- ----S----- ----U----- ----V-----"
835 line_1="G D M c m s m s m s m s"
836 line_2="E p a R g m m e . m m e . m m e . m m e ."
837 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
838 line_4="2 d e n d n x n . n x n . n x n . n x n ."
839 for ii in $PTRACERS_NUM ; do
840 # tst=`eval 'echo $HAVE_PTR0'$ii`
841 # if test "x$tst" = xt ; then
842 line_0="$line_0 --PTR 0"$ii"--"
843 line_1="$line_1 m s"
844 line_2="$line_2 m m e ."
845 line_3="$line_3 i a a d"
846 line_4="$line_4 n x n ."
847 # fi
848 done
849 echo "$line_0" | tee -a $SUMMARY
850 echo "$line_1" | tee -a $SUMMARY
851 echo "$line_2" | tee -a $SUMMARY
852 echo "$line_3" | tee -a $SUMMARY
853 echo "$line_4" | tee -a $SUMMARY
854 echo " " | tee -a $SUMMARY
855 else
856 echo "ADJOINT=true" >> $SUMMARY
857 echo >> $SUMMARY
858 cat << EOF | tee -a $SUMMARY
859 G D M C G
860 E p a R o r
861 N n k u s a
862 2 d e n t d
863
864 EOF
865 fi
866
867 # ...and each test directory...
868 for dir in $TESTDIRS ; do
869
870 # Cleanup only!
871 if test "x$CLEANUP" = xt ; then
872 if test -r $dir/build/Makefile ; then
873 ( cd $dir/build ; make CLEAN )
874 fi
875 if test -r $dir/input/Makefile ; then
876 ( cd $dir/input ; make CLEAN )
877 fi
878 (
879 cd $dir
880 rm -rf tr_run.*
881 )
882 continue
883 fi
884
885 # Verify that the testdir exists and contains previous
886 # results in the correct location--or skip this directory!
887 fout=
888 if test "x$ADM" = x ; then
889 fout=$dir"/results/output.txt"
890 else
891 fout=$dir"/results_ad/output.txt_adm"
892 fi
893 if test ! -r $fout ; then
894 echo "can't read \"$fout\" -- skipping $dir"
895 continue
896 fi
897 if test "x$ADM" = x ; then
898 check_for_add_mon_output $fout
899 fi
900
901 # Check for additional types of monitor output
902
903 builddir="input"
904 rundir="input"
905 use_seperate_build=0
906 if test -d $dir/build -a -r $dir/build ; then
907 builddir="build"
908 rundir="build"
909 use_seperate_build=1
910 linkdata $use_seperate_build $dir/$rundir
911 fi
912
913 # Check whether there are "extra runs" for this testdir
914 extra_runs=
915 if test "x$ADM" = x -a "x$use_seperate_build" = x1 ; then
916 ex_run_dirs=`( cd $dir ; echo input.* )`
917 echo "ex_run_dirs='$ex_run_dirs'"
918 for exd in $ex_run_dirs ; do
919 name=`echo $exd | sed -e 's/input.//g'`
920 outf="$dir/results/output.txt.$name"
921 if test -f $outf -a -r $outf ; then
922 extra_runs="$extra_runs $name"
923 fi
924 done
925 fi
926
927 if test "x$ADM" = x ; then
928 code_dir=code
929 CODE_DIR=$dir/code
930 else
931 code_dir=code_ad
932 CODE_DIR=$dir/code_ad
933 fi
934 BUILD_DIR=$dir/$builddir
935
936 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
937 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
938 continue
939 fi
940
941 echo "-------------------------------------------------------------------------------"
942 echo
943 echo "Experiment: $dir"
944 echo
945 unset genmake makedepend make run
946 results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --'
947
948 # Create an output dir for each OPTFILE/tdir combination
949 rel_CDIR=$DRESULTS"/"$dir
950 mkdir $rel_CDIR
951 CDIR=`pwd`"/$rel_CDIR"
952
953 if test "x$CLEANUP" = xt ; then
954 makeclean $dir/$builddir
955 else
956 genmakemodel $dir/$builddir && genmake=Y \
957 && makeclean $dir/$builddir \
958 && symlink_mpifiles $dir $code_dir $builddir \
959 && makedependmodel $dir/$builddir && makedepend=Y \
960 && makemodel $dir/$builddir && make=Y \
961 && linkdata $use_seperate_build $dir/$rundir \
962 && runmodel $dir/$rundir && run=Y \
963 && results=`testoutput $dir $rundir`
964 fi
965
966 echo
967 if test "x$ADM" = x ; then
968 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
969 echo
970 echo "$fres" >> $SUMMARY
971 echo "fresults='$fres'" > $CDIR"/summary.txt"
972 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
973 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
974 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
975 echo "tdir='$dir'" >> $CDIR"/summary.txt"
976
977 for ex in $extra_runs ; do
978 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
979 for ldir in input.$ex input ; do
980 (
981 cd "$dir/$ldir" > /dev/null 2>&1
982 ls -1 2>/dev/null \
983 | sed -e 's|^CVS$||g' | sed -e 's|^output.txt$||g'
984 ) > tr_exrun_links
985 (
986 cd "$dir/tr_run.$ex"
987 cat ../../tr_exrun_links | while read i ; do
988 if test ! "x$i" = x ; then
989 test ! -r $i && ln -s "../"$ldir"/"$i $i
990 fi
991 done
992 )
993 test -e tr_exrun_links && rm -f tr_exrun_links
994 done
995 ldir=build
996 (
997 cd "$dir/$ldir" > /dev/null 2>&1
998 ls -1 Makefile *.[fFhco] mitgcmuv 2>/dev/null \
999 | sed -e 's|^CVS$||g' | sed -e 's|^output.txt$||g'
1000 ) > tr_exrun_links
1001 (
1002 cd "$dir/tr_run.$ex"
1003 cat ../../tr_exrun_links | while read i ; do
1004 if test ! "x$i" = x ; then
1005 test ! -r $i && ln -s "../"$ldir"/"$i $i
1006 fi
1007 done
1008 )
1009 test -e tr_exrun_links && rm -f tr_exrun_links
1010 runmodel $dir/tr_run.$ex && run=Y \
1011 && results=`testoutput $dir tr_run.$ex "."$ex`
1012 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
1013 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1014 fres="$fres.$ex"
1015 echo
1016 echo "$fres" >> $SUMMARY
1017 echo "fresults='$fres'" > $CDIR"/summary.txt"
1018 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1019 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1020 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1021 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1022 done
1023 else
1024 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
1025 fres=$fres"$results $dir"
1026 echo
1027 echo "$fres" >> $SUMMARY
1028 echo "fresults='$fres'" > $CDIR"/summary.txt"
1029 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1030 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1031 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1032 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1033 fi
1034
1035 echo "-------------------------------------------------------------------------------"
1036
1037 done
1038
1039 printf "Start time: " >> $SUMMARY
1040 echo $start_date >> $SUMMARY
1041 printf "End time: " >> $SUMMARY
1042 date >> $SUMMARY
1043
1044 # If addresses were supplied and mpack built successfully, then try
1045 # to send email using mpack.
1046 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1047 echo "No results email was sent."
1048 else
1049 if test "x$HAVE_MPACK" = xt ; then
1050 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1051 && gzip $DRESULTS".tar" \
1052 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1053 RETVAL=$?
1054 if test "x$RETVAL" != x0 ; then
1055 echo
1056 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1057 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1058 echo " summary of results from the directory \"$DRESULTS\"."
1059 echo
1060 else
1061 echo
1062 echo "An email containing results was sent to the following addresses:"
1063 echo " \"$ADDRESSES\""
1064 echo
1065 fi
1066 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1067 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1068 fi
1069 fi
1070
1071 # rm -f tmp_cmpnum.f a.out
1072 rm -f tmp_cmpnum.c tmp_cmpnum
1073
1074 if test "x$CLEANUP" != xt ; then
1075 cat $SUMMARY
1076 if test -e tr_out.txt ; then
1077 mv tr_out.txt tr_out.txt.old
1078 fi
1079 cat $SUMMARY > tr_out.txt
1080 fi
1081
1082 if test "x$DELDIR" = xt ; then
1083 rm -rf $DRESULTS
1084 fi

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