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Revision 1.43 - (show annotations) (download)
Thu Jul 8 20:58:24 2004 UTC (19 years, 8 months ago) by edhill
Branch: MAIN
CVS Tags: checkpoint54b_post
Changes since 1.42: +11 -2 lines
 o add testreport "-j JOBS" for parallel builds -- gives impressive
   speedup on Altix, Opteron, and other SMP machines

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.42 2004/07/08 15:47:19 jmc Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mpi) use MPI input files"
15 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
16 echo " (DEF=\"-ieee\")"
17 echo " (-optfile=|-of=)STRING list of optfiles to use"
18 echo " (-a|-addr) STRING list of email recipients"
19 echo " (DEF=\"edhill@mitgcm.org\")"
20 echo " (-t|-tdir) STRING list of test dirs to use"
21 echo " (DEF=\"\" which builds all)"
22 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
23 echo " Bourne-compatible \"sh\" shell"
24 echo " (DEF=\"\" for \"bash\")"
25 echo " (-adm|-ad) perform an adjoint run"
26 echo " (-command) STRING command to run"
27 echo " (DEF=\"make output.txt\")"
28 echo " (-m|-make) STRING command to use for \"make\""
29 echo " (DEF=\"make\")"
30 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
31 echo " (-clean) *ONLY* run \"make CLEAN\""
32 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
33 echo " (-nogenmake|-ng) skip the genmake stage"
34 echo " (-noclean|-nc) skip the \"make clean\" stage"
35 echo " (-nodepend|-nd) skip the \"make depend\" stage"
36 echo " (-deldir|-dd) on success, delete the output directory"
37 echo
38 echo "and where STRING follows a whitespace-delimited format"
39 echo "such as:"
40 echo " -t 'exp0 exp2 exp3' "
41 echo " -addr='abc@123.com testing@home.org'"
42 echo
43 exit 1
44 }
45
46 # build the mpack utility
47 build_mpack()
48 {
49 printf "building the mpack utility... "
50 if test ! -x "$MPACKDIR/mpack" ; then
51 if test ! -d $MPACKDIR ; then
52 echo
53 echo "Error: can't find \"$MPACKDIR\""
54 echo " are you sure this program is being run in the correct "
55 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
56 echo
57 HAVE_MPACK=f
58 fi
59 printf "building mpack... "
60 if test "x$CC" = x ; then
61 export CC=cc
62 fi
63 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
64 RETVAL=$?
65 if test "x$RETVAL" != x0 ; then
66 echo
67 echo "Error building the mpack tools at: $MPACK_DIR"
68 echo
69 HAVE_MPACK=f
70 else
71 rm -f tr_build_mpack.out
72 HAVE_MPACK=t
73 fi
74 else
75 HAVE_MPACK=t
76 fi
77 echo "OK"
78 }
79
80 testoutput_for_prop()
81 {
82 # testoutput_for_prop dir s1 label subdir extension
83 #
84 # compares files in $dir/$subdir/output.txt and $dir/results/output.txt
85 # using search strings s1 and text label
86
87 if [ $debug -gt 0 ]; then
88 echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2
89 fi
90 if [ -r $1/$4/output.txt ]; then
91 grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt
92 lncnt=`wc -l tmp1.txt | awk '{print $1}' `
93 if [ $lncnt -lt 3 ]; then
94 if [ $verbose -gt 0 ]; then
95 echo Not enough lines of output when searching for "$2" 1>&2
96 fi
97 return 99
98 fi
99 else
100 echo testoutput_for_prop: output.txt from model run was not readable 1>&2
101 return 99
102 fi
103 if [ $debug -gt 0 ]; then
104 echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2
105 fi
106 grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt
107 lncnt=`wc -l tmp2.txt | awk '{print $1}' `
108 if [ $lncnt -lt 3 ]; then
109 if [ $verbose -gt 0 ]; then
110 echo Not enough lines of output when searching for "$2" 1>&2
111 fi
112 return 99
113 fi
114 if [ $debug -gt 0 ]; then
115 echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2
116 fi
117 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
118 if [ $debug -gt 0 ]; then
119 echo testoutput_for_prop: compare_lines 1>&2
120 fi
121 if [ $verbose -gt 1 ]; then
122 cat tmp3.txt 1>&2
123 fi
124 echo "-1" >> tmp3.txt
125 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
126 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
127 digits_of_similarity=`./tmp_cmpnum < tmp4.txt`
128 if [ $digits_of_similarity -eq 99 ]; then
129 if [ $verbose -gt 0 ]; then
130 echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2
131 fi
132 digits_of_similarity=99
133 else
134 if [ $verbose -gt 0 ]; then
135 echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2
136 fi
137 fi
138 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
139
140 return $digits_of_similarity
141 }
142
143 dashnum()
144 {
145 # dashnum n1 n2 n3 ...
146 #
147 # print numbers using %3i format or "--" if number = 99
148
149 for num in $@ ; do
150 if [ $num = 99 ]; then
151 printf ' --'
152 else
153 printf '%3i' $num
154 fi
155 done
156 }
157
158 testoutput_ad()
159 {
160 grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt
161 grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt
162 grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt
163 grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt
164 join t05.txt t15.txt > t5.txt
165 join t06.txt t16.txt > t6.txt
166 echo "-1" >> t5.txt
167 echo "-1" >> t6.txt
168 digits_5=`./tmp_cmpnum < t5.txt`
169 digits_6=`./tmp_cmpnum < t6.txt`
170 dashnum $digits_5 $digits_6
171 rm -f t[01][56].txt t[56].txt
172 }
173
174 testoutput()
175 {
176 # testoutput directory subdir extension
177 #
178 # test output in "directory"
179 if test "x$ADM" = x ; then
180 if [ $debug -gt 0 ]; then
181 echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2
182 fi
183 testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$?
184 if [ $debug -gt 0 ]; then
185 echo testoutput: cg2dres=$cg2dres 1>&2
186 fi
187 testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$?
188 testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$?
189 testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$?
190 testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$?
191 testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$?
192 testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$?
193 testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$?
194 testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$?
195 testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$?
196 testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$?
197 testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$?
198 testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$?
199 testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$?
200 testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$?
201 testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$?
202 testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$?
203 dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \
204 $umin $umax $umean $usd $vmin $vmax $vmean $vsd
205 else
206 testoutput_ad $1 $2 "precision_grdchk_result"
207 fi
208 }
209
210 genmakemodel()
211 {
212 # genmakemodel directory
213 if test "x$NOGENMAKE" = xt ; then
214 echo "genmake skipped!"
215 else
216 if test "x$BASH" = x ; then
217 GENMAKE2="../../../tools/genmake2"
218 else
219 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
220 fi
221 (
222 cd $1;
223 command="$GENMAKE2 -ds -m $MAKE"
224 if test "x$ADM" = x ; then
225 command="$command --mods=../code"
226 else
227 command="$command --mods=../code_ad"
228 command="$command -adof=../../../tools/adjoint_options/adjoint_staf"
229 fi
230 if test "x$OPTFILE" != xNONE ; then
231 command="$command --optfile=$OPTFILE"
232 fi
233 if test "x$IEEE" != x ; then
234 command="$command -ieee"
235 fi
236 printf 'genmake ... ' 1>&2
237 $command > make.log 2>&1
238 RETVAL=$?
239 cp Makefile $CDIR
240 if test "x$RETVAL" != x0 ; then
241 tail make.log
242 echo "genmakemodel: genmake failed" 1>&2
243 cp genmake_* make.log $CDIR
244 return 1
245 else
246 echo "successful" 1>&2
247 fi
248 )
249 fi
250 }
251
252 makeclean()
253 {
254 # makeclean directory
255 if test "x$NOCLEAN" = xt ; then
256 echo "make CLEAN skipped!"
257 else
258 (
259 cd $1;
260 if test -e output.txt ; then
261 rm -f output.txt
262 fi
263 printf 'make CLEAN ... ' 2>&1
264 if test -r Makefile ; then
265 $MAKE CLEAN >> make.log 2>&1
266 RETVAL=$?
267 if test "x$RETVAL" != x0 ; then
268 tail make.log
269 echo "makeclean: \"make CLEAN\" failed" 1>&2
270 cp make.log $CDIR"/make.log"
271 return 1
272 fi
273 fi
274 echo successful 1>&2
275 exit 0
276 )
277 fi
278 }
279
280 makedependmodel()
281 {
282 # makedependmodel directory
283 if test "x$NODEPEND" = xt ; then
284 echo "make depend skipped!"
285 else
286 (
287 cd $1;
288 printf 'make depend ... ' 1>&2
289 $MAKE depend >> make.log 2>&1
290 RETVAL=$?
291 if test "x$RETVAL" != x0 ; then
292 tail make.log
293 echo "makedependmodel: make depend failed" 1>&2
294 cp make.log $CDIR"/make.log"
295 return 1
296 else
297 echo successful 1>&2
298 fi
299 )
300 fi
301 }
302
303 makemodel()
304 {
305 # makemodel directory
306 (
307 cd $1;
308 if test -r Makefile ; then
309 printf 'make ... ' 1>&2
310 if test "x$ADM" = x ; then
311 if test "x$JOBS" = x ; then
312 $MAKE >> make.log 2>&1
313 else
314 $MAKE -j $JOBS >> make.log 2>&1
315 fi
316 else
317 $MAKE adall >> make.log 2>&1
318 fi
319 RETVAL=$?
320 if test "x$RETVAL" != x0 ; then
321 tail make.log
322 echo failed 1>&2
323 cp make.log $CDIR"/make.log"
324 return 1
325 else
326 echo successful 1>&2
327 fi
328 fi
329 )
330 }
331
332 symlink_mpifiles()
333 {
334 # Put special links so that MPI specific files are used
335 # This MUST be invoked between makeclean and makelinks because
336 # the Makefile will link to non-mpi files by default
337
338 dir=$1
339 code_dir=$2
340 BUILD_DIR=$dir/$3
341 CODE_DIR=$dir/$code_dir
342
343 # These are files that should replace their counter-part when using -mpi
344 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
345
346 # Is this an MPI run?
347 if test "x$MPI" = xt ; then
348 # YES: We symbolically link these files to the build
349 # dir so long as there is no real file in place
350 for ii in $MPI_FILES ; do
351 i=`echo $ii | sed 's:^\./::'`
352 name=`echo $i | sed 's:_mpi::' `
353 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
354 RETVAL=$?
355 if test "x$RETVAL" != x0 ; then
356 if ! test -f $BUILD_DIR/$i ; then
357 #echo Linking $name to $i
358 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
359 fi
360 fi
361 done
362 else
363 # NO: We undo any _mpi symbolically linked files
364 for ii in $MPI_FILES ; do
365 i=`echo $ii | sed 's:^\./::'`
366 name=`echo $i | sed 's:_mpi::' `
367 if test -L $BUILD_DIR/$name ; then
368 linktarg=`(cd $BUILD_DIR; readlink $name)`
369 if test $linktarg = "../$code_dir/$name"_mpi ; then
370 #echo Un-linking $name from $linktarg
371 rm -f $BUILD_DIR/$name
372 fi
373 fi
374 done
375 fi
376
377 }
378
379 linkdata()
380 {
381 # linkdata flag
382 #
383 # symbolically link data files to run directory
384 if test "x$1" = x1 ; then
385 (
386 cd $2
387 if test "x$ADM" = x ; then
388 files=`( cd ../input ; ls -1 | grep -v CVS )`
389 for i in $files ; do
390 if test ! -d "../input/"$i ; then
391 ln -sf "../input/"$i $i
392 fi
393 done
394 else
395 files=`( cd ../input ; ls -1 *.bin | grep -v CVS )`
396 for i in $files ; do
397 if test ! -d "../input/"$i ; then
398 ln -sf "../input/"$i $i
399 fi
400 done
401 files=`( cd ../input_ad ; ls -1 | grep -v CVS )`
402 for i in $files ; do
403 if test ! -d "../input_ad/"$i ; then
404 ln -sf "../input_ad/"$i $i
405 fi
406 done
407 fi
408 )
409 fi
410 }
411
412 runmodel()
413 {
414 # runmodel directory
415 #
416 # runs "$COMMAND in "directory"
417 # (where "$COMMAND" is relative to "directory")
418 (
419 cd $1
420 printf 'runmodel ... ' 1>&2
421 # make output.txt
422 echo
423 # echo "COMMAND='$COMMAND'"
424 # echo "pwd='"`pwd`"'"
425 ( eval $COMMAND ) >> run.log 2>&1
426 RETVAL=$?
427 if test "x$RETVAL" = x0 ; then
428 echo successful 1>&2
429 if test "x$ADM" = x ; then
430 cp output.txt $CDIR"/output.txt"
431 else
432 cp output.txt_adm $CDIR"/output.txt_adm"
433 fi
434 return 0
435 else
436 tail run.log
437 echo failed 1>&2
438 cp run.log $CDIR"/run.log"
439 return 1
440 fi
441 )
442 }
443
444 createcodelet()
445 {
446 # create codelet for comparing model output
447
448 printf "creating the comparison code... "
449 cat > tmp_cmpnum.c <<EOF
450 #include <stdio.h>
451 #include <math.h>
452 int main( int argc, char** argv ) {
453 int linnum,best,lncnt;
454 double a,b,diff;
455 best = -16;
456 lncnt = 0;
457 while( 1 & (lncnt+=1) < 999 ) {
458 scanf("%d", &linnum);
459 if (linnum == -1) break;
460 scanf("%lf", &a); scanf("%lf", &b);
461 diff = 0.5*(fabs(a)+fabs(b));
462 if (diff > 1.e-12) {
463 diff=fabs(a-b)/diff;
464 if (diff > 0.0) {
465 linnum = (int)log10(diff);
466 best = (best > linnum) ? best : linnum;
467 }
468 else {
469 if (best == -16 && diff != 0) best = -22;
470 }
471 }
472 }
473 if (lncnt == 999) best=-29;
474 printf("%d\n", -best);
475 return 0;
476 }
477 EOF
478 cc -o tmp_cmpnum tmp_cmpnum.c -lm
479
480 if [ -x ./tmp_cmpnum ]; then
481 echo "OK"
482 return 0
483 else
484 echo
485 echo "ERROR: failed to compile comparison code"
486 exit 1
487 fi
488 }
489
490 formatresults()
491 {
492 # formatresults expt genmake depend make run results*
493
494 nm=$1
495 printf '%s %s %s %s' $2 $3 $4 $5
496 shift; shift; shift; shift; shift;
497 printf '%3s' $@
498
499 if [ $1 = '--' ]; then
500 printf ' N/O '
501 else
502 if [ $1 -gt 12 ]; then
503 printf ' pass'
504 else
505 printf ' FAIL'
506 fi
507 fi
508 printf ' %s' $nm
509 printf '\n'
510
511 }
512
513 show_help()
514 {
515 cat - << EOF
516 $0 [-help] [-quick] [-verbose] dir1 [dir2] [...]
517
518 -help|-h Show this help message
519 -quiet Reduce the amount of output
520 -verbose Produce copious amounts of output
521 -debug Produce even more output which will mean nothing to most
522 -force Do "make CLEAN" before compiling. This forces a complete rebuild.
523 -clean Do "make CLEAN" after compiling and testing.
524 -cleanup Aggresively removes all model output, executables and object files
525 and then exits. Use with care.
526
527 Normal usage:
528 $0 * Configure, compile, run and analyze in all experiment directories
529 EOF
530 }
531
532 scandirs()
533 {
534 if [ $# -eq 0 ]; then
535 for arg in * ; do
536 test -d $arg/input && echo $arg
537 done
538 else
539 echo $*
540 fi
541 }
542
543
544 ###############################################################################
545
546
547 # Default properties
548 debug=0
549 verbose=1
550 clean=0
551 expts=''
552 # ieee=1
553
554 IEEE=true
555 if test "x$MITGCM_IEEE" != x ; then
556 IEEE=$MITGCM_IEEE
557 fi
558
559
560 CLEANUP=f
561 QUICK=f
562 NOGENMAKE=f
563 NOCLEAN=f
564 NODEPEND=f
565
566 BASH=
567 OPTFILE=NONE
568 ADDRESSES=
569 TESTDIRS=
570 MPACKDIR="../tools/mpack-1.6"
571 HAVE_MPACK=
572 MPACK="$MPACKDIR/mpack"
573 COMMAND=
574 MAKE=make
575 JOBS=
576 MPI=f
577 DELDIR=
578
579 ADM=
580
581 printf "parsing options... "
582
583 ac_prev=
584 for ac_option ; do
585
586 # If the previous option needs an argument, assign it.
587 if test -n "$ac_prev"; then
588 eval "$ac_prev=\$ac_option"
589 ac_prev=
590 continue
591 fi
592
593 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
594
595 case $ac_option in
596
597 -help | --help | -h | --h)
598 usage ;;
599
600 -optfile | --optfile | -of | --of)
601 ac_prev=OPTFILE ;;
602 -optfile=* | --optfile=* | -of=* | --of=*)
603 OPTFILE=$ac_optarg ;;
604
605 -addr | --addr | -a | --a)
606 ac_prev=ADDRESSES ;;
607 -addr=* | --addr=*)
608 ADDRESSES=$ac_optarg ;;
609
610 -tdir | --tdir | -t | --t)
611 ac_prev=TESTDIRS ;;
612 -tdir=* | --tdir=*)
613 TESTDIRS=$ac_optarg ;;
614
615 -bash | --bash | -b | --b)
616 ac_prev=BASH ;;
617 -bash=* | --bash=*)
618 BASH=$ac_optarg ;;
619
620 -command | --command | -c | --c)
621 ac_prev=COMMAND ;;
622 -command=* | --command=*)
623 COMMAND=$ac_optarg ;;
624
625 -make | --make | -m | --m)
626 ac_prev=MAKE ;;
627 -make=* | --make=*)
628 MAKE=$ac_optarg ;;
629
630 -j) ac_prev=JOBS ;;
631 -j=*) JOBS=$ac_optarg ;;
632
633 -clean | --clean)
634 CLEANUP=t ;;
635
636 -quick | --quick | -q | --q)
637 QUICK=t ;;
638 -nogenmake | --nogenmake | -ng | --ng)
639 NOGENMAKE=t ;;
640 -noclean | --noclean | -nc | --nc)
641 NOCLEAN=t ;;
642 -nodepend | --nodepend | -nd | --nd)
643 NODEPEND=t ;;
644
645 -mpi) MPI=t ;;
646
647 -adm | -ad) ADM=t ;;
648
649 -ieee) IEEE=true ;;
650 -noieee) IEEE= ;;
651
652 -verbose) verbose=2 ;;
653 -debug) debug=1 ;;
654 -quiet) verbose=0 ;;
655
656 -deldir | -dd) DELDIR=t ;;
657
658 -*)
659 echo "Error: unrecognized option: "$ac_option
660 usage
661 ;;
662
663 *)
664 echo "Error: unrecognized argument: "$ac_option
665 usage
666 ;;
667
668 esac
669
670 done
671
672 if test "x$QUICK" = xt ; then
673 NOGENMAKE=t
674 NOCLEAN=t
675 NODEPEND=t
676 fi
677
678 if test "x$TESTDIRS" = x ; then
679 TESTDIRS=`scandirs`
680 fi
681
682 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
683 OPTFILE=$MITGCM_OF
684 fi
685
686 if test "x$ADM" = xt -a "x$COMMAND" = x ; then
687 COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1"
688 fi
689
690 if test "x$COMMAND" = x ; then
691 COMMAND="make output.txt"
692 fi
693
694 echo "OK"
695
696 # create the FORTRAN comparison code
697 createcodelet
698
699 # build the mpack utility
700 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
701 echo "skipping mpack build"
702 else
703 build_mpack
704 fi
705
706 # Create a uniquely named directory to store results
707 MACH=`hostname`
708 UNAMEA=`uname -a`
709 DATE=`date +%Y%m%d`
710 BASE="tr_"$MACH"_"$DATE"_"
711 DNUM=0
712 DRESULTS="$BASE$DNUM"
713 while test -e $DRESULTS ; do
714 DNUM=$(( $DNUM + 1 ))
715 DRESULTS="$BASE$DNUM"
716 done
717 mkdir $DRESULTS
718 RETVAL=$?
719 if test "x$RETVAL" != x0 ; then
720 echo "ERROR: Can't create results directory \"./$DRESULTS\""
721 exit 1
722 fi
723 SUMMARY="$DRESULTS/summary.txt"
724 printf "Start time: " >> $SUMMARY
725 start_date=`date`
726 echo $start_date > $SUMMARY
727
728 of_path=
729 if test "x$OPTFILE" != xNONE ; then
730 if test -r $OPTFILE ; then
731 # get the path
732 path=${OPTFILE%/*}
733 if test "x$path" = x ; then
734 of_path=`pwd`
735 else
736 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
737 fi
738 file=${OPTFILE##*/}
739 OPTFILE=$of_path/$file
740 cp $OPTFILE $DRESULTS
741 echo >> $SUMMARY
742 echo " OPTFILE=$OPTFILE" >> $SUMMARY
743 else
744 echo | tee $SUMMARY
745 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
746 exit 1
747 fi
748 else
749 echo >> $SUMMARY
750 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
751 echo " so the genmake default will be used." >> $SUMMARY
752 fi
753 echo
754 echo >> $SUMMARY
755 if test "x$ADM" = x ; then
756 cat << EOF | tee -a $SUMMARY
757 T S U V
758 G D M c m s m s m s m s
759 E p a R g m m e . m m e . m m e . m m e .
760 N n k u 2 i a a d i a a d i a a d i a a d
761 2 d e n d n x n . n x n . n x n . n x n .
762
763 EOF
764 else
765 echo "ADJOINT=true" >> $SUMMARY
766 echo >> $SUMMARY
767 cat << EOF | tee -a $SUMMARY
768 G D M C G
769 E p a R o r
770 N n k u s a
771 2 d e n t d
772
773 EOF
774 fi
775
776 # ...and each test directory...
777 for dir in $TESTDIRS ; do
778
779 # Cleanup only!
780 if test "x$CLEANUP" = xt ; then
781 if test -r $dir/build/Makefile ; then
782 ( cd $dir/build ; make CLEAN )
783 fi
784 if test -r $dir/input/Makefile ; then
785 ( cd $dir/input ; make CLEAN )
786 fi
787 continue
788 fi
789
790 # Verify that the testdir exists and contains previous
791 # results in the correct location--or skip this directory!
792 fout=
793 if test "x$ADM" = x ; then
794 fout=$dir"/results/output.txt"
795 else
796 fout=$dir"/results_ad/output.txt_adm"
797 fi
798 if test ! -r $fout ; then
799 echo "can't read \"$fout\" -- skipping $dir"
800 continue
801 fi
802
803 builddir="input"
804 rundir="input"
805 use_seperate_build=0
806 if test -d $dir/build -a -r $dir/build ; then
807 builddir="build"
808 rundir="build"
809 use_seperate_build=1
810 linkdata $use_seperate_build $dir/$rundir
811 fi
812
813 # Check whether there are "extra runs" for this testdir
814 extra_runs=
815 if test "x$ADM" = x -a "x$use_seperate_build" = x1 ; then
816 ex_run_dirs=`( cd $dir ; echo input.* )`
817 echo "ex_run_dirs='$ex_run_dirs'"
818 for exd in $ex_run_dirs ; do
819 name=`echo $exd | sed -e 's/input.//g'`
820 outf="$dir/results/output.txt.$name"
821 if test -f $outf -a -r $outf ; then
822 extra_runs="$extra_runs $name"
823 fi
824 done
825 fi
826
827 if test "x$ADM" = x ; then
828 code_dir=code
829 CODE_DIR=$dir/code
830 else
831 code_dir=code_ad
832 CODE_DIR=$dir/code_ad
833 fi
834 BUILD_DIR=$dir/$builddir
835
836 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
837 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
838 continue
839 fi
840
841 echo "-------------------------------------------------------------------------------"
842 echo
843 echo "Experiment: $dir"
844 echo
845 unset genmake makedepend make run
846 results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --'
847
848 # Create an output dir for each OPTFILE/tdir combination
849 rel_CDIR=$DRESULTS"/"$dir
850 mkdir $rel_CDIR
851 CDIR=`pwd`"/$rel_CDIR"
852
853 if test "x$CLEANUP" = xt ; then
854 makeclean $dir/$builddir
855 else
856 genmakemodel $dir/$builddir && genmake=Y \
857 && makeclean $dir/$builddir \
858 && symlink_mpifiles $dir $code_dir $builddir \
859 && makedependmodel $dir/$builddir && makedepend=Y \
860 && makemodel $dir/$builddir && make=Y \
861 && linkdata $use_seperate_build $dir/$rundir \
862 && runmodel $dir/$rundir && run=Y \
863 && results=`testoutput $dir $rundir`
864 fi
865
866 echo
867 if test "x$ADM" = x ; then
868 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
869 echo
870 echo "$fres" >> $SUMMARY
871 echo "fresults='$fres'" > $CDIR"/summary.txt"
872 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
873 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
874 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
875 echo "tdir='$dir'" >> $CDIR"/summary.txt"
876
877 OLD_COMMAND=$COMMAND
878 COMMAND="./mitgcmuv > output.txt"
879 for ex in $extra_runs ; do
880 test -e "$dir/tr_run.$ex" && rm -rf "$dir/tr_run.$ex"
881 mkdir "$dir/tr_run.$ex"
882 links=`( cd "$dir/input" > /dev/null 2>&1 ; ls -1 | grep -v CVS )`
883 (
884 cd "$dir/tr_run.$ex"
885 for i in $links; do
886 ln -s ../input/$i $i
887 done
888 )
889 links=`( cd "$dir/input.$ex" > /dev/null 2>&1 ; ls -1 | grep -v CVS )`
890 (
891 cd "$dir/tr_run.$ex"
892 for i in $links; do
893 test -e $i && rm -f $i
894 ln -s ../input.$ex/$i $i
895 done
896 ln -s ../$builddir/mitgcmuv mitgcmuv
897 )
898 runmodel $dir/tr_run.$ex && run=Y \
899 && results=`testoutput $dir tr_run.$ex "."$ex`
900 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
901 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
902 fres="$fres.$ex"
903 echo
904 echo "$fres" >> $SUMMARY
905 echo "fresults='$fres'" > $CDIR"/summary.txt"
906 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
907 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
908 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
909 echo "tdir='$dir'" >> $CDIR"/summary.txt"
910 done
911 COMMAND=$OLD_COMMAND
912 else
913 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
914 fres=$fres"$results $dir"
915 echo
916 echo "$fres" >> $SUMMARY
917 echo "fresults='$fres'" > $CDIR"/summary.txt"
918 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
919 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
920 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
921 echo "tdir='$dir'" >> $CDIR"/summary.txt"
922 fi
923
924 echo "-------------------------------------------------------------------------------"
925
926 done
927
928 printf "Start time: " >> $SUMMARY
929 echo $start_date >> $SUMMARY
930 printf "End time: " >> $SUMMARY
931 date >> $SUMMARY
932
933 # If addresses were supplied and mpack built successfully, then try
934 # to send email using mpack.
935 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
936 echo "No results email was sent."
937 else
938 if test "x$HAVE_MPACK" = xt ; then
939 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
940 && gzip $DRESULTS".tar" \
941 && $MPACK -s MITgcm-test -m 1500000 $DRESULTS".tar.gz" $ADDRESSES
942 RETVAL=$?
943 if test "x$RETVAL" != x0 ; then
944 echo
945 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
946 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
947 echo " summary of results from the directory \"$DRESULTS\"."
948 echo
949 else
950 echo
951 echo "An email containing results was sent to the following addresses:"
952 echo " \"$ADDRESSES\""
953 echo
954 fi
955 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
956 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
957 fi
958 fi
959
960 # rm -f tmp_cmpnum.f a.out
961 rm -f tmp_cmpnum.c tmp_cmpnum
962
963 if test "x$CLEANUP" != xt ; then
964 cat $SUMMARY
965 if test -e tr_out.txt ; then
966 mv tr_out.txt tr_out.txt.old
967 fi
968 cat $SUMMARY > tr_out.txt
969 fi
970
971 if test "x$DELDIR" = xt ; then
972 rm -rf $DRESULTS
973 fi

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