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Revision 1.175 - (show annotations) (download)
Wed Aug 15 23:19:21 2012 UTC (11 years, 7 months ago) by jmc
Branch: MAIN
Changes since 1.174: +212 -172 lines
- add option '-tlm' for Tangent-Linear test (-adm,-oad,-tlm are all exclusive);
- can also use compressed (gzip) reference output file;

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.174 2012/06/27 15:20:51 jmc Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi-threaded (using eedata.mth)"
15 echo " (-mpi) use MPI to compile and run on 2 processors"
16 echo " (-MPI) NUMBER use MPI to compile and run on max NUMBER procs"
17 echo " (-mfile|-mf) STRING MPI: file with list of possible machines to run on"
18 echo " (-fast) use optfile default for compiler flags (no '-ieee')"
19 echo " DEF=off => use IEEE numerics option (if available)"
20 echo " (-devel) use optfile developement flags (if available)"
21 echo " (-gsl) compile with \"-gsl\" flag"
22 echo " (-use_r4|-ur4) if allowed, use real*4 type for '_RS' variable"
23 echo " (-optfile|-of) STRING list of optfiles to use"
24 echo " (-addr|-a) STRING list of email recipients"
25 echo " (DEF=\"\" no email is sent)"
26 echo " (-mpackdir|-mpd) DIR location of the mpack utility"
27 echo " (DEF=\"../tools/mpack-1.6\")"
28 echo " (-tdir|-t) STRING list of group and/or exp. dirs to test"
29 echo " (recognized groups: basic, tutorials)"
30 echo " (DEF=\"\" which test all)"
31 echo " (if list= 'start_from THIS_EXP' then"
32 echo " test THIS_EXP + all the following)"
33 echo " (-skipdir|-skd) STRING list of exp. dirs to skip"
34 echo " (DEF=\"\" which test all)"
35 echo " (-bash|-b) STRING preferred location of a \"bash\" or"
36 echo " Bourne-compatible \"sh\" shell"
37 echo " (DEF=\"\" for \"bash\")"
38 echo " (-tlm) perform a Tangent Linear run"
39 echo " (-adm|-ad) perform an adjoint run"
40 echo " (-oad) perform an OpenAD adjoint run"
41 echo " (-command|-c) STRING command to run"
42 echo " (-makedepend|-md) STRING command to use for \"makedepend\""
43 echo " (-make|-m) STRING command to use for \"make\""
44 echo " (DEF=\"make\")"
45 echo " (-odir) STRING used to build output directory name"
46 echo " (DEF=\"hostname\")"
47 # echo " (-ptracers|-ptr) STRING specify which ptracers to test"
48 # echo " (DEF=\"1 2 3 4 5\")"
49 echo " (-match) NUMBER Matching Criteria (number of digits)"
50 echo " (DEF=\"$MATCH_CRIT\")"
51 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
52 echo " (-ef) STRING used as genmake2 \"-extra_flag\" argument"
53 echo " (-clean) *ONLY* run \"make CLEAN\" & clean run-dir"
54 echo " (-norun|-nr) skip the \"runmodel\" stage (stop after make)"
55 echo " (-obj) only produces objects (=norun & no executable)"
56 echo " (-runonly|-ro) *ONLY* run stage (=\"-quick\" without make)"
57 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
58 echo " (-nogenmake|-ng) skip the genmake stage"
59 echo " (-noclean|-nc) skip the \"make clean\" stage"
60 echo " (-nodepend|-nd) skip the \"make depend\" stage"
61 echo " (-postclean|-pc) after each exp. test, clean build-dir & run-dir"
62 echo " (-deloutp|-do) delete output files after successful run"
63 echo " (-deldir|-dd) on success, delete the output directory"
64 echo " (-ts) provide timing information per timestep"
65 echo " (-papis) provide MFlop/s per timestep using PAPI"
66 echo " (-pcls) provide MFlop/s per timestep using PCL"
67 echo
68 echo "and where STRING can be a whitespace-delimited list"
69 echo "such as:"
70 echo
71 echo " -t 'exp0 exp2 exp3' "
72 echo " -addr='abc@123.com testing@home.org'"
73 echo
74 echo "provided that the expression is properly quoted within the current"
75 echo "shell (note the use of single quotes to protect white space)."
76 echo
77 exit 1
78 }
79
80 # build the mpack utility
81 build_mpack()
82 {
83 printf "building the mpack utility... "
84 MPACK="$MPACKDIR/mpack"
85 if test ! -x $MPACK ; then
86 if test ! -d $MPACKDIR ; then
87 echo
88 echo "Error: can't find \"$MPACKDIR\""
89 echo " are you sure this program is being run in the correct "
90 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
91 echo
92 HAVE_MPACK=f
93 fi
94 if test "x$CC" = x ; then
95 export CC=cc
96 fi
97 printf "building mpack (using CC=$CC)... "
98 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
99 RETVAL=$?
100 if test "x$RETVAL" != x0 ; then
101 echo
102 echo "Error building the mpack tools at: $MPACK_DIR"
103 echo
104 HAVE_MPACK=f
105 else
106 rm -f tr_build_mpack.out
107 HAVE_MPACK=t
108 echo "done"
109 fi
110 else
111 HAVE_MPACK=t
112 echo "already exist"
113 fi
114 }
115
116 testoutput_var()
117 {
118 # testoutput_var dir s1 label subdir reference_output
119 #
120 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
121 # with same output from reference file $dir/$reference_output
122 # using search strings s1 and text label
123
124 if [ $debug -gt 0 ]; then
125 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
126 fi
127 if [ -r $1/$4/$OUTPUTFILE ]; then
128 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
129 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
130 if [ $lncntA -lt 2 ]; then
131 if [ $verbose -gt 0 ]; then
132 echo Not enough lines of output when searching for "$2" 1>&2
133 fi
134 rm -f tmp1.txt ; return 99
135 fi
136 else
137 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
138 return 99
139 fi
140 if [ $debug -gt 0 ]; then
141 echo testoutput_var: grep "$2" $1/$5 1>&2
142 fi
143 grep "$2" $1/$5 | sed 's/.*=//' | cat -n > tmp2.txt
144 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
145 if [ $lncntB -lt 2 ]; then
146 if [ $verbose -gt 0 ]; then
147 echo Not enough lines of output when searching for "$2" 1>&2
148 fi
149 rm -f tmp1.txt tmp2.txt ; return 99
150 fi
151 if [ $lncntA -ne $lncntB ]; then
152 if [ $verbose -gt 0 ]; then
153 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
154 fi
155 rm -f tmp1.txt tmp2.txt ; return 99
156 fi
157 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
158 if [ $has_nan -gt 0 ] ; then
159 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
160 rm -f tmp1.txt tmp2.txt ; return 99
161 fi
162 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
163 if [ $has_inf -gt 0 ] ; then
164 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
165 rm -f tmp1.txt tmp2.txt ; return 99
166 fi
167 if [ $debug -gt 0 ]; then
168 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
169 fi
170 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
171 if [ $debug -gt 0 ]; then
172 echo testoutput_var: compare_lines 1>&2
173 fi
174 if [ $verbose -gt 1 ]; then
175 cat tmp3.txt 1>&2
176 fi
177 echo "-1" >> tmp3.txt
178 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
179 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
180 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
181 if [ $digits_of_similarity -eq 99 ]; then
182 if [ $verbose -gt 0 ]; then
183 echo testoutput_var: No comparison was available for \"$3\" 1>&2
184 fi
185 digits_of_similarity=99
186 else
187 if [ $verbose -gt 0 ]; then
188 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
189 fi
190 fi
191 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
192
193 return $digits_of_similarity
194 }
195
196 testoutput_run()
197 {
198 # testoutput_run directory subdir reference_output
199 #
200 # test output from 1 run in "directory"
201 # --> same processing for adjoint & forward test
202 # default list of output variables to be checked:
203 # 1rst : main variable used to decide if it pass or FAIL
204 # others : number of matching digits to be printed in summary.txt
205 listChk=$DEF_CHECK_LIST
206 # load experiment-specific list from file "tr_checklist" (if it exist)
207 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
208 sVar=`echo $listChk | awk '{print $1}'`
209 # remove 1rst var and expand the list: + => min max mean s.d
210 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
211 | sed 's/+//g' | sed "s/^$sVar//"`
212 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
213 # set ref.outp file-name and, if compressed, uncompress it into subdir
214 refoutp=results/$3
215 if test ! -r $1/results/$3 ; then
216 if test -r $1/results/${3}.gz ; then
217 tmpNam1=$3
218 tmpNam2=`echo $tmpNam1 | sed 's/\..*\././'`
219 if test "x$tmpNam1" = "x$tmpNam2" ; then
220 tmpNam1=`echo $tmpNam2 | sed 's/\./.std./'`
221 fi
222 refoutp=$2/$tmpNam1
223 if [ $debug -gt 0 ]; then
224 echo "testoutput_run: gunzip 'results/$3.gz' into '$refoutp'" 1>&2
225 fi
226 gzip -cd $1/results/${3}.gz > $1/$refoutp
227 else
228 echo "missing reference output file '$3' (.gz) in '$1/results/'"
229 fi
230 fi
231 # check for ptracer output in reference_output file :
232 if test $KIND = 0 ; then
233 ptr_mon="trcstat_ptracerXX_min trcstat_ptracerXX_max"
234 ptr_mon="$ptr_mon trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
235 for ii in $PTRACERS_NUM ; do
236 ptrfound=0
237 for jj in $ptr_mon ; do
238 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
239 tst=`grep $name $1/$refoutp | wc -l | awk '{print $1}'`
240 if test ! "x$tst" = x0 ; then ptrfound=1 ; fi
241 done
242 if test $ptrfound = '1' ; then
243 eval "HAVE_PTR0"$ii"=t"
244 else
245 eval "HAVE_PTR0"$ii"=f"
246 # remove this ptr from the list of output variable to check
247 # echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
248 listVar=`echo "$listVar" | sed "s/ pt$ii..//g"`
249 fi
250 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' 1>&2
251 done
252 fi
253 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'`
254 if test $tst != 1 ; then
255 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
256 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
257 echo "==> WARNING: in checked list:" $listVar 1>&2
258 #- put it back once:
259 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
260 fi
261 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
262 echo "listVar='$listVar'" >> $locDIR"/summary.txt"
263 #---
264 allargs=""
265 for xx in $listVar
266 do
267 case $xx in
268 'PS') if [ $debug -gt 0 ]
269 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
270 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $refoutp ; yy=$?
271 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
272 'Cost') testoutput_var $1 "ADM ref_cost_function" "ADM CostFct" $2 $refoutp ; yy=$? ;;
273 'AdGrd') testoutput_var $1 "ADM adjoint_gradient" "ADM Ad Grad" $2 $refoutp ; yy=$? ;;
274 'FDGrd') testoutput_var $1 "ADM finite-diff_grad" "ADM FD Grad" $2 $refoutp ; yy=$? ;;
275 'tlmCst') testoutput_var $1 "TLM ref_cost_function" "TLM CostFct" $2 $refoutp ; yy=$? ;;
276 'tlmGrd') testoutput_var $1 "TLM tangent-lin_grad" "TLM TL Grad" $2 $refoutp ; yy=$? ;;
277 'fwdGrd') testoutput_var $1 "TLM finite-diff_grad" "TLM FD Grad" $2 $refoutp ; yy=$? ;;
278 'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $refoutp ; yy=$? ;;
279 'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $refoutp ; yy=$? ;;
280 'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $refoutp ; yy=$? ;;
281 'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $refoutp ; yy=$? ;;
282 'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $refoutp ; yy=$? ;;
283 'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $refoutp ; yy=$? ;;
284 'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $refoutp ; yy=$? ;;
285 'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $refoutp ; yy=$? ;;
286 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $refoutp ; yy=$? ;;
287 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $refoutp ; yy=$? ;;
288 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $refoutp ; yy=$? ;;
289 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $refoutp ; yy=$? ;;
290 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $refoutp ; yy=$? ;;
291 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $refoutp ; yy=$? ;;
292 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $refoutp ; yy=$? ;;
293 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $refoutp ; yy=$? ;;
294 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
295 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $refoutp ; yy=$? ;;
296 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
297 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $refoutp ; yy=$? ;;
298 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
299 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $refoutp ; yy=$? ;;
300 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
301 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $refoutp ; yy=$? ;;
302 'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $refoutp ; yy=$? ;;
303 'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $refoutp ; yy=$? ;;
304 'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $refoutp ; yy=$? ;;
305 'Qntsd') testoutput_var $1 "forcing_qnet_sd" "Qnet Std.Dev" $2 $refoutp ; yy=$? ;;
306 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $refoutp ; yy=$? ;;
307 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $refoutp ; yy=$? ;;
308 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $refoutp ; yy=$? ;;
309 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $refoutp ; yy=$? ;;
310 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $refoutp ; yy=$? ;;
311 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Heff max" $2 $refoutp ; yy=$? ;;
312 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Heff mean" $2 $refoutp ; yy=$? ;;
313 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Heff StDv" $2 $refoutp ; yy=$? ;;
314 'uSImn') testoutput_var $1 "seaice_uice_min" "SIce Uice min" $2 $refoutp ; yy=$? ;;
315 'uSImx') testoutput_var $1 "seaice_uice_max" "SIce Uice max" $2 $refoutp ; yy=$? ;;
316 'uSIav') testoutput_var $1 "seaice_uice_mean" "SIce Uice mean" $2 $refoutp ; yy=$? ;;
317 'uSIsd') testoutput_var $1 "seaice_uice_sd" "SIce Uice StDv" $2 $refoutp ; yy=$? ;;
318 'vSImn') testoutput_var $1 "seaice_vice_min" "SIce Vice min" $2 $refoutp ; yy=$? ;;
319 'vSImx') testoutput_var $1 "seaice_vice_max" "SIce Vice max" $2 $refoutp ; yy=$? ;;
320 'vSIav') testoutput_var $1 "seaice_vice_mean" "SIce Vice mean" $2 $refoutp ; yy=$? ;;
321 'vSIsd') testoutput_var $1 "seaice_vice_sd" "SIce Vice StDv" $2 $refoutp ; yy=$? ;;
322 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $refoutp ; yy=$? ;;
323 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $refoutp ; yy=$? ;;
324 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $refoutp ; yy=$? ;;
325 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $refoutp ; yy=$? ;;
326 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $refoutp ; yy=$? ;;
327 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $refoutp ; yy=$? ;;
328 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
329 esac
330 if test $xx = $sVar
331 then allargs="$allargs > $yy <"
332 else allargs="$allargs $yy"
333 fi
334 done
335
336 nbVar=`echo $listVar | awk '{print NF}'`
337 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
338 #-- fill line (up to standard length) with dot:
339 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
340 echo $allargs $adNul
341 else
342 echo $allargs
343 fi
344 # <-- same processing for adjoint & forward test
345 }
346
347 genmakemodel()
348 {
349 # genmakemodel directory
350 if test "x$NOGENMAKE" = xt ; then
351 echo "genmake skipped!"
352 else
353 if test "x$BASH" = x ; then
354 GENMAKE2="../../../tools/genmake2"
355 else
356 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
357 fi
358 (
359 cd $1;
360 command="$GENMAKE2 -ds -m $MAKE"
361 if test "x$MKDEPEND" != x ; then
362 command="$command -makedepend=$MKDEPEND"
363 fi
364 if test $KIND = 1 -o $KIND = 2 ; then
365 command="$command --mods=../code_ad"
366 elif test $KIND = 4 ; then
367 command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'"
368 else
369 command="$command -mods=../code"
370 fi
371 if test "x$OPTFILE" != xNONE ; then
372 command="$command -optfile=$OPTFILE"
373 fi
374 if test $OptLev = 1 ; then
375 command="$command -ieee"
376 fi
377 if test $OptLev = 0 ; then
378 command="$command -devel"
379 fi
380 if test "x$GSL" = xt ; then
381 command="$command -gsl"
382 fi
383 if test "x$MPI" != x0 ; then
384 command="$command -mpi"
385 fi
386 if test "x$MULTI_THREAD" = xt ; then
387 #- run multi-threaded using OpenMP:
388 command="$command -omp"
389 fi
390 if test "x$USE_R4" = xt ; then
391 command="$command -use_r4"
392 fi
393 if test "x$EXTRFLG" != x ; then
394 command="$command -extra_flag $EXTRFLG"
395 fi
396 if test "x$TS" = xt ; then
397 command="$command -ts"
398 fi
399 if test "x$PAPIS" = xt ; then
400 command="$command -papis"
401 else
402 if test "x$PCLS" = xt ; then
403 command="$command -pcls"
404 fi
405 fi
406 printf 'genmake ... '
407 eval $command > genmake.tr_log 2>&1
408 RETVAL=$?
409 # Reduce the size of the testing emails!
410 head -100 Makefile > $CDIR/Makefile_head
411 if test "x$RETVAL" != x0 ; then
412 tail genmake.tr_log
413 echo "genmakemodel: genmake failed"
414 cp genmake.log genmake_* genmake.tr_log $CDIR
415 return 1
416 else
417 echo "successful"
418 fi
419 )
420 fi
421 }
422
423 makeclean()
424 {
425 # makeclean directory
426 if test "x$NODEPEND" = xf ; then rm -f $1/make.tr_log ; fi
427 if test "x$NOCLEAN" = xt ; then
428 echo "make Clean skipped!"
429 else
430 (
431 cd $1;
432 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
433 if test -r Makefile ; then
434 printf 'clean build-dir: make Clean ... '
435 $MAKE Clean >> make.tr_log 2>&1
436 RETVAL=$?
437 if test "x$RETVAL" != x0 ; then
438 tail make.tr_log
439 echo "makeclean: \"make Clean\" failed"
440 cp make.tr_log genmake.log genmake.tr_log $CDIR
441 return 1
442 fi
443 echo successful
444 else
445 echo ''
446 fi
447 exit 0
448 )
449 fi
450 }
451
452 run_clean()
453 {
454 # run_clean directory
455 if test "x$NOCLEAN" = xt ; then
456 echo "run_clean skipped!"
457 else
458 (
459 cd $1;
460 printf 'clean run-dir ... '
461 # part of what is done after "make clean" when doing "make CLEAN"
462 find . -name "*.meta" -exec rm {} \;
463 find . -name "*.data" -exec rm {} \;
464 find . -name "fort.*" -exec rm {} \;
465 find . -type l -exec rm {} \;
466 #- should remove executable only if sym-link (alredy done above)
467 rm -f $RUNLOG *.txt STD* w2_tile_topology.????.log *diagnostics.log datetime
468 rm -rf mnc_test_*
469 rm -f *_MIT_CE_000.opt0000 costfunction*0000
470 echo successful
471 exit 0
472 )
473 fi
474 }
475
476 makedependmodel()
477 {
478 # makedependmodel directory
479 if test "x$NODEPEND" = xt ; then
480 echo "make depend skipped!"
481 else
482 (
483 cd $1;
484 printf 'make depend ... '
485 $MAKE depend >> make.tr_log 2>&1
486 RETVAL=$?
487 if test "x$RETVAL" != x0 ; then
488 tail make.tr_log
489 echo "makedependmodel: make depend failed"
490 cp make.tr_log genmake.log genmake.tr_log $CDIR
491 return 1
492 else
493 echo successful
494 fi
495 )
496 fi
497 }
498
499 makemodel()
500 {
501 # makemodel directory
502 (
503 mk_fail=0
504 if test "x$NOMAKE" = xt ; then
505 cd $1;
506 if test -x $EXECUTABLE ; then
507 echo "make skipped!"
508 else
509 echo "no executable!"
510 mk_fail=3
511 fi
512 else
513 cd $1;
514 if test -r Makefile ; then
515 printf 'make ... '
516 if test "x$REPLMAKE" = x ; then
517 $MAKE $TARG >> make.tr_log 2>&1
518 else
519 $REPLMAKE $TARG >> make.tr_log 2>&1
520 fi
521 RETVAL=$?
522 if test "x$RETVAL" != x0 ; then
523 tail make.tr_log
524 echo failed
525 cp genmake.log genmake.tr_log $CDIR
526 tail -$NBLINES_MKLOG make.tr_log > $CDIR"/make.tr_log_tail"
527 rm -f $EXECUTABLE
528 mk_fail=1
529 else
530 echo successful
531 fi
532 else
533 echo "no Makefile !"
534 mk_fail=2
535 fi
536 fi
537 if test $KIND = 2 -a -f taf_ad.log ; then
538 head -1 taf_ad.log >> $CDIR"/summary.txt"
539 nerr=`grep -c 'TAF *.* ERROR ' taf_ad.log`
540 nwar=`grep -c 'TAF RECOMPUTATION *.* WARNING ' taf_ad.log`
541 echo " TAF reports $nerr Errors and $nwar Recomputation Warnings" \
542 >> $CDIR"/summary.txt"
543 fi
544 if test $mk_fail != 0 ; then return $mk_fail ; fi
545 )
546 }
547
548 mk_mpi_size()
549 {
550 # mk_mpi_size input_file output_file proc_Nb threads_Nb_X threads_Nb_Y
551 #
552 # make new SIZE.h (=output_file) from SIZE.h_mpi (=input_file)
553 # for an MPI build with no more than proc_Nb processors ;
554 # ensure that enough tiles per proc (nSx,nSy) remain for the given
555 # number of threads (nTx,nTy) ;
556 # return the effective number of processors.
557
558 inp=$1
559 out=$2
560 np=$3
561 tx=$4
562 ty=$5
563 tmp=TTT.$$
564
565 # dirX : select with direction to favor in MPI process repartition
566 # dirX=1 : prefer to put more proc in X direction
567 # dirX=0 : prefer to put more proc in Y direction
568 dirX=0
569
570 px=`grep "^ & *nPx *=" $inp | sed "s/^ & *nPx *= *//" | sed 's/, *$//'`
571 py=`grep "^ & *nPy *=" $inp | sed "s/^ & *nPy *= *//" | sed 's/, *$//'`
572 sx=`grep "^ & *nSx *=" $inp | sed "s/^ & *nSx *= *//" | sed 's/, *$//'`
573 sy=`grep "^ & *nSy *=" $inp | sed "s/^ & *nSy *= *//" | sed 's/, *$//'`
574
575 #- for each direction, assume # of threads is a multiple of total number of tiles
576 nx=$px
577 if [ `expr $sx % $tx` -ne 0 -a `expr $sx \* $px % $tx` -eq 0 ] ; then
578 nx=`expr $sx \* $px / $tx`
579 if [ $verbose -gt 1 ]; then
580 echo " change px from $px to $nx to accommodate $tx threads"
581 fi
582 fi
583 ny=$py
584 if [ `expr $sy % $ty` -ne 0 -a `expr $sy \* $py % $ty` -eq 0 ] ; then
585 ny=`expr $sy \* $py / $ty`
586 if [ $verbose -gt 1 ]; then
587 echo " change py from $py to $ny to accommodate $ty threads"
588 fi
589 fi
590 #- find the largest divisor of input_file proc Nb, but not larger than $np
591 pp=0
592 i=1
593 while [ $i -le $nx ] ; do
594 if [ `expr $nx % $i` -eq 0 ] ; then
595 j=1
596 while [ $j -le $ny ] ; do
597 if [ `expr $ny % $j` -eq 0 ] ; then
598 ij=`expr $i \* $j`
599 if [ $ij -gt $pp ] ; then
600 flag=1
601 elif [ $ij -eq $pp ] ; then
602 flag=$dirX
603 else
604 flag=0
605 fi
606 if test $flag = 1 ; then
607 if [ $ij -le $np ] ; then
608 ix=$i ; jy=$j ; pp=$ij
609 #echo " ix,jy= $ix,$jy"
610 fi
611 fi
612 fi
613 j=`expr $j + 1`
614 done
615 fi
616 i=`expr $i + 1`
617 done
618
619 #- create new SIZE.h type file:
620 sx=`expr $sx \* $px / $ix`
621 sy=`expr $sy \* $py / $jy`
622 if [ $verbose -gt 1 ]; then
623 echo " px,py,np= $px,$py,$np : New MPI size: px,py= $ix,$jy : sx,sy= $sx,$sy"
624 fi
625 sed "/^ \& *nPx *=/s/[0-9]*,/$ix,/" $inp > $tmp
626 sed "/^ \& *nPy *=/s/[0-9]*,/$jy,/" $tmp > $out
627 sed "/^ \& *nSx *=/s/[0-9]*,/$sx,/" $out > $tmp
628 sed "/^ \& *nSy *=/s/[0-9]*,/$sy,/" $tmp > $out
629 rm -f $tmp
630 return $pp
631 }
632
633 symlink_mpifiles()
634 {
635 # Put special links so that MPI specific files are used
636 # This MUST be invoked between makeclean and makelinks because
637 # the Makefile will link to non-mpi files by default
638
639 dir=$1
640 code_dir=$2
641 build_dir=$dir/$3
642
643 # These are files that should replace their counter-part when using -mpi
644 MPI_FILES=`(cd $dir/$code_dir; find . -name "*_mpi" -print)`
645
646 for ii in $MPI_FILES ; do
647 i=`echo $ii | sed 's:^\./::'`
648 name=`echo $i | sed 's:_mpi::'`
649 file="../$code_dir/$i"
650 if test $name = 'SIZE.h' ; then file="SIZE.h.mpi" ; fi
651
652 # Is this an MPI run?
653 if test "x$MPI" = x0 ; then
654 # NO: We undo any _mpi symbolically linked files
655 if test -L $build_dir/$name ; then
656 ( cd $build_dir ; cmp $name $file > /dev/null 2>&1 )
657 RETVAL=$?
658 if test "x$RETVAL" = x0 ; then
659 if [ $verbose -gt 1 ]; then
660 echo " Un-linking $name from ../$code_dir" ; fi
661 rm -f $build_dir/$name
662 fi
663 fi
664 else
665 # YES: We symbolically link these files to the build
666 # dir so long as there is no real file in place
667 ( cd $build_dir ; cmp $name $file > /dev/null 2>&1 )
668 RETVAL=$?
669 if [ $verbose -gt 1 ]; then echo " cmp $name $file returns: $RETVAL" ; fi
670 if test "x$RETVAL" != x0 ; then
671 if test -h $build_dir/$name ; then rm -f $build_dir/$name ; fi
672 if test ! -r $build_dir/$name ; then
673 if [ $verbose -gt 1 ]; then echo " Linking $name to $file" ; fi
674 (cd $build_dir; ln -sf $file $name)
675 fi
676 fi
677 fi
678 done
679 }
680
681 linkdata()
682 {
683 # linkdata run_dir input_dir_1 input_dir_2 ...
684 #
685 # symbolically link data files to run directory
686 if test -d $1 ; then
687 (
688 cd $1 ; shift
689 echo 'linkdata from dirs:' $*
690 inpMPI=`(cd ../$1 ; find . -name "*.mpi" -print | sed 's:^\./::')`
691 for xx in $inpMPI ; do
692 if test -r "../"$1"/"$xx ; then
693 # found 1 _mpi sfx file in 1rst input dir and it is readable
694 yy=`echo $xx | sed 's:\.mpi$::'`
695 if test "x$MPI" = "x0" ; then
696 # not mpi test: remove symbolic link
697 if test -h $yy ; then rm -f $yy ; fi
698 else
699 # mpi test: remove symbolic link & link .mpi sfx file
700 if test -h $yy ; then rm -f $yy ; fi
701 if test ! -r $yy ; then
702 ln -sf "../"$1"/"$xx $yy ;
703 printf " $xx" 1>&2
704 fi
705 fi
706 fi
707 done
708 if test -r "../"$1"/eedata.mth" ; then
709 # found eedata.mth in 1rst input dir and it is readable
710 if test "x$MULTI_THREAD" = "xt" ; then
711 # multi-threaded test: remove symbolic link & link eedata.mth
712 if test -h eedata ; then rm -f eedata ; fi
713 if test ! -r eedata ; then
714 ln -sf "../"$1"/eedata.mth" eedata ;
715 printf ' eedata.mth' 1>&2
716 fi
717 else
718 # not multi-threaded test: remove eedata symbolic link
719 if test -h eedata ; then rm -f eedata ; fi
720 fi
721 fi
722 prevDir='NONE'
723 for ldir in $* ; do
724 if test -d "../"$ldir -a $ldir != $prevDir ; then
725 printf " ldir=${ldir}:" 1>&2
726 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
727 for i in $files ; do
728 if test ! -d "../"$ldir/$i ; then
729 if test ! -r $i ; then
730 printf ' '$i 1>&2
731 ln -sf "../"$ldir"/"$i $i
732 fi
733 fi
734 done
735 printf ' ;' 1>&2
736 if test -x "../"$ldir"/"prepare_run ; then
737 "../"$ldir"/"prepare_run 1>&2
738 else
739 echo '' 1>&2
740 fi
741 fi
742 prevDir=$ldir
743 done
744 )
745 fi
746 }
747
748 runmodel()
749 {
750 # runmodel directory
751 #
752 # runs $COMMAND in "directory"
753 # (where "$COMMAND" is relative to "directory")
754 (
755 cd $1
756 printf 'runmodel in %s ... ' $1
757 if test "x$MPI" != x0 ; then
758 #- adjust the MPI run command with the right number of Procs
759 #echo '' ; echo " COMMAND='$COMMAND'"
760 COMMAND=`echo $COMMAND | sed "s/ TR_NPROC / $LOC_NPROC /"`
761 if test "x$MPI_MFILE" != x ; then
762 COMMAND=`echo $COMMAND | sed "s/ TR_MFILE / ..\/..\/$LOC_MFILE /"`
763 fi
764 #echo " COMMAND='$COMMAND'"
765 fi
766 if test -L $EXECUTABLE ; then
767 if test -x "../"$builddir"/"$EXECUTABLE ; then
768 cmp $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1
769 outD=$? ; if test "x$outD" != x0 ; then rm -f $EXECUTABLE ; fi
770 else rm -f $EXECUTABLE
771 fi
772 fi
773 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
774 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp
775 ln -sf "../"$builddir"/"$EXECUTABLE .
776 fi
777 if test ! -x $EXECUTABLE ; then
778 rm -f $RUNLOG ; touch $RUNLOG
779 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
780 echo " no executable:" $EXECUTABLE >> $RUNLOG
781 RETVAL=8
782 ENDVAL=-1
783 else
784 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
785 # output do not exist or is older than executable:
786 rm -f $OUTPUTFILE $RUNLOG ; touch $RUNLOG
787 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
788 ( eval $COMMAND ) >> $RUNLOG 2>&1
789 RETVAL=$?
790 ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'`
791 if [ $POSTCLEAN -eq 1 -a $ENDVAL -gt 0 ] ; then
792 find . -name "*.meta" -exec rm {} \;
793 find . -name "*.data" -exec rm {} \;
794 rm -rf mnc_test_*
795 fi
796 else
797 RETVAL=0
798 ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'`
799 touch $RUNLOG
800 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
801 echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1
802 fi
803 fi
804 rm -f run.log_tmp
805 #- in all cases where OutputFile exists, report SIZE (and AD time)
806 if test -f $OUTPUTFILE ; then
807 grep '(PID\.TID 0000\.0001) n.. =' $OUTPUTFILE \
808 | sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt"
809 if test $KIND = 2 ; then
810 grep -A3 'Seconds in section "ALL' $OUTPUTFILE >> $CDIR"/summary.txt"
811 fi
812 fi
813 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
814 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
815 echo successful
816 printf '=> output from running in %s :\n' $1 1>&2
817 tail $RUNLOG | sed 's/^.*/> &/g' 1>&2
818 return 0
819 elif [ $RETVAL -ne 0 -a $ENDVAL -gt 0 ] ; then
820 #-- for some weird cases (run is finihed but with error code)
821 echo 'finished with error (run:' $RETVAL ' end:' $ENDVAL ')'
822 printf '=> output from running in %s :\n' $1 1>&2
823 tail $RUNLOG | sed 's/^.*/> &/g' 1>&2
824 return 0
825 else
826 echo 'failed (run:' $RETVAL ' end:' $ENDVAL ')'
827 printf '=> output from running in %s :\n' $1 1>&2
828 tail $RUNLOG | sed 's/^.*/> &/g' 1>&2
829 cp $RUNLOG $CDIR"/"$RUNLOG
830 return 1
831 fi
832 )
833 }
834
835 createcodelet()
836 {
837 # create codelet for comparing model output
838
839 printf "creating the comparison code (using CC=$CC)... "
840 cat > tr_cmpnum.c <<EOF
841 #include <stdio.h>
842 #include <math.h>
843 int main( int argc, char** argv ) {
844 int linnum,cmplin,best,lncnt;
845 double a,b,abave,relerr;
846 best = -22;
847 lncnt = 0;
848 while( 1 & ( (lncnt+=1) < 999 ) ) {
849 scanf("%d", &linnum);
850 if (linnum == -1) break;
851 scanf("%lf", &a); scanf("%lf", &b);
852 abave = 0.5*(fabs(a)+fabs(b));
853 if ( abave == abave ) {
854 if (abave > 0.0) {
855 relerr=fabs(a-b)/abave;
856 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
857 else { cmplin = -16 ; }
858 best = (best > cmplin) ? best : cmplin; }
859 else { cmplin = -22 ; }
860 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
861 }
862 else {
863 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
864 break; }
865 }
866 if (lncnt == 999) best=-29;
867 if (linnum != -1) best=-99;
868 printf("%d\n", -best);
869 return 0;
870 }
871 EOF
872 $CC -o tr_cmpnum tr_cmpnum.c -lm
873
874 if [ -x ./tr_cmpnum ]; then
875 echo "OK"
876 return 0
877 else
878 echo
879 echo "ERROR: failed to compile comparison code -- please specify"
880 echo " a C compiler using the CC environment variable."
881 exit 1
882 fi
883 }
884
885 formatresults()
886 {
887 # formatresults expt genmake depend make run results*
888
889 nm=$1
890 printf '%s %s %s %s' $2 $3 $4 $5
891 shift; shift; shift; shift; shift;
892 listPrt=$@
893 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
894 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
895 printf '%3s' $listPrt
896 # line below does not work on hp-ux_ia64 : do those substitutions later on
897 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
898
899 if [ $xx = '..' ]; then
900 printf ' N/O '
901 elif [ $xx = '--' ]; then
902 printf ' N/O '
903 elif [ $xx = 99 ]; then
904 printf ' N/O '
905 else
906 if [ $xx -ge $MATCH_CRIT ]; then
907 printf ' pass'
908 else
909 printf ' FAIL'
910 fi
911 fi
912 printf ' %s' $nm
913 printf '\n'
914
915 }
916
917 scandirs()
918 {
919 if [ $# -eq 1 ]; then
920 for arg in * ; do
921 #test -f $arg/$1 && echo $arg
922 test -f $arg/$1 -o -f $arg/$1.gz && echo $arg
923 done
924 else
925 echo $*
926 fi
927 }
928
929
930 check_eedata()
931 {
932 # check_eedata eedata size.h
933 if [ $# -eq 2 ] ; then
934 if test -f $1 -a -f $2 ; then
935 nx=`grep "^ *nTx *=" $1 | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"`
936 sx=`grep "^ & *nSx *=" $2 | sed "s/^ & *nSx *=//" | sed 's/, *$//'`
937 if test "x$nx" = x ; then
938 rx=10
939 else
940 rx=`expr $sx % $nx`
941 fi
942 ny=`grep "^ *nTy *=" $1 | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"`
943 sy=`grep "^ & *nSy *=" $2 | sed "s/^ & *nSy *=//" | sed 's/, *$//'`
944 if test "x$ny" = x ; then
945 ry=20
946 else
947 ry=`expr $sy % $ny`
948 fi
949 echo `expr $rx + $ry`
950 else
951 echo '-1'
952 fi
953 elif [ $# -eq 1 ] ; then
954 if test -f $1 ; then
955 nx=`grep "^ *nTx *=" $1 | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"`
956 if test "x$nx" = x ; then nx=1 ; fi
957 ny=`grep "^ *nTy *=" $1 | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"`
958 if test "x$ny" = x ; then ny=1 ; fi
959 #echo $nx $ny
960 echo $nx
961 else
962 echo '-1'
963 fi
964 else
965 echo '-2'
966 fi
967
968 }
969
970 ###############################################################################
971
972
973 # Default properties
974 debug=0
975 verbose=1
976 NBLINES_MKLOG=16000
977
978 OptLev=1
979 GSL=f
980
981 CLEANUP=f
982 NORUN=f
983 QUICK=f
984 NOMAKE=f
985 NOGENMAKE=f
986 NOCLEAN=f
987 NODEPEND=f
988 POSTCLEAN=0
989
990 BASH=
991 OPTFILE=NONE
992 ADDRESSES=
993 TESTDIRS=
994 SKIPDIRS=
995 MPACKDIR="../tools/mpack-1.6"
996 HAVE_MPACK=
997 MPACK=
998 COMMAND=
999 MKDEPEND=
1000 if test "x$MAKE" = x ; then
1001 MAKE=make
1002 fi
1003 REPLMAKE=
1004 if test "x$CC" = x ; then
1005 CC=cc
1006 fi
1007 JOBS=
1008 TARG=
1009 MPI=0
1010 MPI_MFILE=
1011 MULTI_THREAD=f
1012 OUTDIR=
1013 DELDIR=
1014 USE_R4=
1015 EXTRFLG=
1016
1017 #- type of testing (KIND):
1018 # KIND=0 : forward (= default) ; KIND=1 : Tangent Linear with TAF ;
1019 # KIND=2 : Adjoint with TAF ; KIND=4 : Adjoint with OpenAD
1020 KIND=0
1021
1022 # list of pTracers to check for monitor output
1023 PTRACERS_NUM="1 2 3 4 5"
1024
1025 MATCH_CRIT=10
1026
1027 printf "parsing options... "
1028
1029 ac_prev=
1030 for ac_option ; do
1031
1032 # If the previous option needs an argument, assign it.
1033 if test -n "$ac_prev"; then
1034 eval "$ac_prev=\$ac_option"
1035 ac_prev=
1036 continue
1037 fi
1038
1039 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1040
1041 case $ac_option in
1042
1043 -help | --help | -h | --h) usage ;;
1044
1045 -optfile | --optfile | -of | --of) ac_prev=OPTFILE ;;
1046 -optfile=* | --optfile=* | -of=* | --of=*) OPTFILE=$ac_optarg ;;
1047
1048 -addr | --addr | -a | --a) ac_prev=ADDRESSES ;;
1049 -addr=* | --addr=* | -a=* | --a=*) ADDRESSES=$ac_optarg ;;
1050 -mpackdir | --mpackdir | -mpd | --mpd) ac_prev=MPACKDIR ;;
1051 -mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*) MPACKDIR=$ac_optarg ;;
1052
1053 -tdir | --tdir | -t | --t) ac_prev=TESTDIRS ;;
1054 -tdir=* | --tdir=* | -t=* | --t=*) TESTDIRS=$ac_optarg ;;
1055 -skipdir | --skipdir | -skd | --skd) ac_prev=SKIPDIRS ;;
1056 -skipdir=* | --skipdir=* | -skd=* | --skd=*) SKIPDIRS=$ac_optarg ;;
1057
1058 -bash | --bash | -b | --b) ac_prev=BASH ;;
1059 -bash=* | --bash=* | -b=* | --b=*) BASH=$ac_optarg ;;
1060
1061 -command | --command | -c | --c) ac_prev=COMMAND ;;
1062 -command=* | --command=* | -c=* | --c=*) COMMAND=$ac_optarg ;;
1063
1064 -makedepend | --makedepend | -md | --md) ac_prev=MKDEPEND ;;
1065 -makedepend=* | --makedepend=* | -md=* | --md=*) MKDEPEND=$ac_optarg ;;
1066
1067 -make | --make | -m | --m) ac_prev=MAKE ;;
1068 -make=* | --make=* | -m=* | --m=*) MAKE=$ac_optarg ;;
1069
1070 -repl_mk | --repl_mk ) ac_prev=REPLMAKE ;;
1071 -repl_mk=* | --repl_mk=*) REPLMAKE=$ac_optarg ;;
1072
1073 -odir | --odir) ac_prev=OUTDIR ;;
1074 -odir=* | --odir=*) OUTDIR=$ac_optarg ;;
1075
1076 -ptracers | --ptracers | -ptr | --ptr) ac_prev=PTRACERS_NUM ;;
1077 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*) PTRACERS_NUM=$ac_optarg ;;
1078
1079 -match | --match ) ac_prev=MATCH_CRIT ;;
1080 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
1081
1082 -j | --j) ac_prev=JOBS ;;
1083 -j=* | --j=*) JOBS=$ac_optarg ;;
1084
1085 -ef | --ef) ac_prev=EXTRFLG ;;
1086 -ef=* | --ef=*) EXTRFLG=$ac_optarg ;;
1087
1088 -clean | --clean) CLEANUP=t ; DELDIR=t ;;
1089
1090 -norun | --norun | -nr | --nr) NORUN=t ;;
1091 -obj | --obj ) TARG='obj' ; NORUN=t ;;
1092 -runonly | --runonly | -ro | --ro) QUICK=t ; NOMAKE=t ;;
1093 -quick | --quick | -q | --q) QUICK=t ;;
1094 -nogenmake | --nogenmake | -ng | --ng) NOGENMAKE=t ;;
1095 -noclean | --noclean | -nc | --nc) NOCLEAN=t ;;
1096 -nodepend | --nodepend | -nd | --nd) NODEPEND=t ;;
1097
1098 -postclean | --postclean | -pc | --pc) POSTCLEAN=2 ;;
1099 -deloutp | --deloutp | -do | --do) POSTCLEAN=1 ;;
1100
1101 -mpi | --mpi) MPI=2 ;;
1102 -MPI | --MPI) ac_prev=MPI ;;
1103 -MPI=* | --MPI=*) MPI=$ac_optarg ;;
1104
1105 -mfile | --mfile | -mf | --mf) ac_prev=MPI_MFILE ;;
1106 -mfile=* | --mfile=* | -mf=* | --mf=*) MPI_MFILE=$ac_optarg ;;
1107
1108 -mth) MULTI_THREAD=t ;;
1109
1110 -tlm) if test $KIND = 0 ; then KIND=1 ; else
1111 echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage
1112 fi ;;
1113 -adm | -ad) if test $KIND = 0 ; then KIND=2 ; else
1114 echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage
1115 fi ;;
1116 -oad) if test $KIND = 0 ; then KIND=4 ; NODEPEND=t ; else
1117 echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage
1118 fi ;;
1119
1120 -ieee) echo "Warning: ignore option '-ieee' (already the default)"
1121 printf " ... " ;;
1122 -noieee) echo "Warning: will use option '-fast' instead of '-noieee' (obsolete)"
1123 printf " ... " ; OptLev=`expr $OptLev \* 2` ;;
1124 -fast) OptLev=`expr $OptLev \* 2` ;;
1125 -devel) OptLev=0 ;;
1126 -gsl) GSL=t ;;
1127
1128 -verbose) verbose=2 ;;
1129 -debug) debug=1 ;;
1130 -quiet) verbose=0 ;;
1131
1132 -deldir | -dd) DELDIR=t ;;
1133
1134 -use_r4|-ur4) USE_R4=t ;;
1135
1136 -ts) TS=t;;
1137 -papis) PAPIS=t;;
1138 -pcls) PCL=t;;
1139
1140 -*) echo "Error: unrecognized option: "$ac_option
1141 usage ;;
1142 *) echo "Error: unrecognized argument: "$ac_option
1143 usage ;;
1144
1145 esac
1146
1147 done
1148
1149 if test "x$QUICK" = xt ; then
1150 NOGENMAKE=t
1151 NOCLEAN=t
1152 NODEPEND=t
1153 fi
1154
1155 #- check length of MPI machine file:
1156 if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then
1157 if test -r $MPI_MFILE ; then
1158 nl=`wc -l $MPI_MFILE | awk '{print $1}'`
1159 if [ $nl -lt $MPI ] ; then
1160 echo "Error: need at least $MPI nodes (currently only $nl) in MPI_MFILE=$MPI_FILE"
1161 usage
1162 fi
1163 if [ $verbose -gt 1 ]; then
1164 echo " MPI_MFILE=$MPI_MFILE : $nl procs for MPI=$MPI run"
1165 fi
1166 else
1167 echo "Error: cannot access MPI_MFILE=$MPI_FILE"
1168 usage
1169 fi
1170 fi
1171
1172 #- setting for forward or ADM testing
1173 if test $KIND = 1 ; then
1174 TARG=ftlall
1175 code_dir=code_ad
1176 inputdir=input_ad
1177 ref_outp="output_tlm.txt"
1178 EXECUTABLE="mitgcmuv_ftl"
1179 elif test $KIND = 2 ; then
1180 if test "x$TARG" = xobj ; then TARG=adobj ; else TARG=adall ; fi
1181 code_dir=code_ad
1182 inputdir=input_ad
1183 ref_outp="output_adm.txt"
1184 EXECUTABLE="mitgcmuv_ad"
1185 elif test $KIND = 4 ; then
1186 TARG=adAll
1187 code_dir=code_oad
1188 inputdir=input_oad
1189 ref_outp="output_oadm.txt"
1190 EXECUTABLE="mitgcmuv_ad"
1191 else
1192 if test "x$JOBS" != x ; then TARG="-j $JOBS $TARG" ; fi
1193 code_dir=code
1194 inputdir=input
1195 ref_outp="output.txt"
1196 EXECUTABLE="mitgcmuv"
1197 fi
1198
1199 xx=`echo $TESTDIRS | awk '{print $1}'`
1200 if test "x$TESTDIRS" = x ; then
1201 LIST=`scandirs results/$ref_outp`
1202 elif test $xx = 'start_from' ; then
1203 xx=`echo $TESTDIRS | awk '{print $2}'`
1204 LIST=`scandirs results/$ref_outp | sed -n "/$xx/,$ p"`
1205 else
1206 #- expand group of experiments:
1207 LIST=" "
1208 for xx in $TESTDIRS
1209 do
1210 case $xx in
1211 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
1212 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
1213 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
1214 ;;
1215 'tutorials')
1216 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
1217 *) LIST=${LIST}" "$xx ;;
1218 esac
1219 done
1220 fi
1221 #echo 'LIST='${LIST}'<'
1222 #- skip dirs, remove duplicate and non-directory:
1223 TESTDIRS=" "
1224 count=0
1225 for xx in $LIST
1226 do
1227 yy=`echo $SKIPDIRS | grep -c $xx`
1228 if test $yy = 0 ; then
1229 if test -d $xx ; then
1230 yy=`echo $TESTDIRS | grep -c $xx`
1231 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
1232 else count=1 ;
1233 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
1234 fi
1235 else
1236 if test $count = 1 ; then echo -n ", \"$xx\""
1237 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
1238 fi
1239 fi
1240 done
1241 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
1242 #echo 'TESTDIRS='${TESTDIRS}'<'
1243
1244 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
1245 OPTFILE=$MITGCM_OF
1246 fi
1247
1248 LOC_MFILE='tr_mpi_mfile'
1249 RUNLOG="run.tr_log"
1250 OUTPUTFILE=$ref_outp
1251 if test "x$COMMAND" = x ; then
1252 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
1253 fi
1254 if test "x$MPI" != x0 ; then
1255 OUTPUTFILE="STDOUT.0000"
1256 fi
1257
1258 echo "OK (COMMAND= $COMMAND )"
1259
1260 # set the Default List of output variables to be checked:
1261 # (use default or load experiment-specific list from file "tr_checklist")
1262 # content : 1rst = main variable used to decide if it pass or FAIL
1263 # others = number of matching digits to be printed in summary.txt
1264 if test $KIND = 1 ; then
1265 DEF_CHECK_LIST='tlmGrd tlmCst tlmGrd fwdGrd'
1266 EMPTY_RESULTS='.. .. ..'
1267 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
1268 elif test $KIND = 2 -o $KIND = 4 ; then
1269 DEF_CHECK_LIST='AdGrd Cost AdGrd FDGrd'
1270 EMPTY_RESULTS='.. .. ..'
1271 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
1272 else
1273 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
1274 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
1275 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
1276 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
1277 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
1278 fi
1279
1280 # create the FORTRAN comparison code
1281 if test -x tr_cmpnum ; then
1282 echo "skipping comparison code build"
1283 else
1284 createcodelet
1285 fi
1286
1287 # build the mpack utility (if ADDRESSES = NONE, do it to test the build)
1288 if test "x$ADDRESSES" = x ; then
1289 echo "skipping mpack build"
1290 else
1291 build_mpack
1292 fi
1293
1294 # Create a uniquely named directory to store results
1295 CMDLINE=$0
1296 for xx in "$@" ; do nw=`echo $xx | wc -w`
1297 if test $nw = '1' ; then CMDLINE="$CMDLINE $xx"
1298 else CMDLINE="$CMDLINE '$xx'" ; fi
1299 done
1300 #for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done
1301 MACH=`hostname`
1302 UNAMEA=`uname -a`
1303 DATE=`date +%Y%m%d`
1304 BASE="tr_"$MACH"_"$DATE"_"
1305 if test "x$OUTDIR" != x ; then
1306 BASE="tr_"$OUTDIR"_"$DATE"_"
1307 else
1308 short_name=`hostname | sed 's/\..*$//'`
1309 BASE="tr_"$short_name"_"$DATE"_"
1310 fi
1311 DNUM=0
1312 DRESULTS="$BASE$DNUM"
1313 while test -e $DRESULTS ; do
1314 DNUM=$(( $DNUM + 1 ))
1315 DRESULTS="$BASE$DNUM"
1316 done
1317 mkdir $DRESULTS
1318 RETVAL=$?
1319 if test "x$RETVAL" != x0 ; then
1320 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1321 exit 1
1322 fi
1323 SUMMARY="$DRESULTS/summary.txt"
1324 start_date=`date`
1325 echo $start_date > $SUMMARY
1326 echo 'run:' $CMDLINE >> $SUMMARY
1327 echo 'on :' $UNAMEA >> $SUMMARY
1328
1329 of_path=
1330 if test "x$OPTFILE" != xNONE ; then
1331 if test -r $OPTFILE ; then
1332 # get the path
1333 path=${OPTFILE%/*}
1334 if test "x$path" = x ; then
1335 of_path=`pwd`
1336 else
1337 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1338 fi
1339 file=${OPTFILE##*/}
1340 OPTFILE=$of_path/$file
1341 cp $OPTFILE $DRESULTS
1342 echo >> $SUMMARY
1343 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1344 else
1345 echo | tee $SUMMARY
1346 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1347 exit 1
1348 fi
1349 else
1350 echo >> $SUMMARY
1351 echo "No \"OPTFILE\" was specified ; genmake2 found and uses:" >> $SUMMARY
1352 #-note: to be filled later after 1rst run
1353 fi
1354 echo
1355 echo >> $SUMMARY
1356 if test $KIND = 0 ; then
1357 line_0=`printf '%s %2i' 'default' $MATCH_CRIT`
1358 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1359 line_1="G D M c m s m s m s m s"
1360 line_2="e p a R g m m e . m m e . m m e . m m e ."
1361 line_3="n n k u 2 i a a d i a a d i a a d i a a d"
1362 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1363 for ii in $PTRACERS_NUM ; do
1364 line_0="$line_0 --PTR 0"$ii"--"
1365 line_1="$line_1 m s"
1366 line_2="$line_2 m m e ."
1367 line_3="$line_3 i a a d"
1368 line_4="$line_4 n x n ."
1369 done
1370 else
1371 line_0=`printf '%s %2i' 'default ' $MATCH_CRIT`
1372 if test $KIND = 1 ; then
1373 echo "TANGLIN=true" >> $SUMMARY
1374 line_1="G D M C T F"
1375 line_2="e p a R o L D"
1376 else
1377 echo "ADJOINT=true" >> $SUMMARY
1378 line_1="G D M C A F"
1379 line_2="e p a R o d D"
1380 fi
1381 line_3="n n k u s G G"
1382 line_4="2 d e n t r r"
1383 echo >> $SUMMARY
1384 fi
1385 echo "$line_0" | tee -a $SUMMARY
1386 echo "$line_1" | tee -a $SUMMARY
1387 echo "$line_2" | tee -a $SUMMARY
1388 echo "$line_3" | tee -a $SUMMARY
1389 echo "$line_4" | tee -a $SUMMARY
1390 echo "" | tee -a $SUMMARY
1391 echo "-------------------------------------------------------------------------------"
1392
1393 # ...and each test directory...
1394 for dir in $TESTDIRS ; do
1395
1396 # set builddir & rundir:
1397 builddir="build"
1398 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1399 rundir="run"
1400 pfxdir="tr_$rundir"
1401 if test ! -d $dir/$rundir ; then
1402 rundir=$builddir
1403 fi
1404 CODE_DIR=$dir/$code_dir
1405 BUILD_DIR=$dir/$builddir
1406
1407 # Cleanup only!
1408 if test "x$CLEANUP" = xt ; then
1409 echo -n ' --- dir:' $BUILD_DIR ': '
1410 makeclean $BUILD_DIR
1411 ( cd $BUILD_DIR
1412 rm -f $EXECUTABLE *.bak
1413 rm -f genmake_state genmake_*optfile genmake.log
1414 rm -f SIZE.h.mpi genmake.tr_log make.tr_log
1415 )
1416 if test -d $dir/$rundir/CVS ; then
1417 echo -n ' --- dir:' $dir/$rundir ': '
1418 run_clean $dir/$rundir
1419 fi
1420 trdir=`( cd $dir ; find . -type d -name "$pfxdir.*" -print | sed 's/^.\///')`
1421 ttd=`echo $trdir | wc -w`
1422 if test $ttd != 0 ; then
1423 echo ' --- rm dir:' $trdir
1424 ( cd $dir ; rm -rf $trdir )
1425 fi
1426 continue
1427 fi
1428
1429 # Verify that the testdir exists and contains previous
1430 # results in the correct location--or skip this directory!
1431 fout=$dir"/results/"$ref_outp
1432 #if test ! -r $fout ; then
1433 if test ! -r $fout -a ! -r ${fout}.gz ; then
1434 echo "can't read \"$fout\" -- skipping $dir"
1435 continue
1436 fi
1437
1438 # Check for specific files for particular type of run
1439
1440 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" != "x0" ; then
1441 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1442 continue
1443 fi
1444 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1445 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1446 continue
1447 fi
1448
1449 if test "x$MPI" != "x0" ; then
1450 ntx=1 ; nty=1
1451 if test "x$MULTI_THREAD" = "xt" ; then
1452 ff=$dir"/input/eedata.mth"
1453 ntx=`grep "^ *nTx *=" $ff | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"`
1454 nty=`grep "^ *nTy *=" $ff | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"`
1455 if test "x$ntx" = x ; then ntx=1 ; fi
1456 if test "x$nty" = x ; then nty=1 ; fi
1457 fi
1458 #- create new SIZE.h with no more than '$MPI' Procs
1459 mk_mpi_size $CODE_DIR"/SIZE.h_mpi" $BUILD_DIR"/tr_size.mpi" $MPI $ntx $nty
1460 LOC_NPROC=$?
1461 ( cd $BUILD_DIR
1462 if test -r SIZE.h.mpi ; then
1463 cmp tr_size.mpi SIZE.h.mpi > /dev/null 2>&1 ; RETVAL=$?
1464 else RETVAL=1
1465 fi
1466 if test "x$RETVAL" = x0 ; then
1467 rm -f tr_size.mpi
1468 else
1469 rm -f SIZE.h.mpi ; mv tr_size.mpi SIZE.h.mpi
1470 fi
1471 )
1472 if test "x$MPI_MFILE" != x ; then
1473 #- create new MPI machine-file with the right number of Procs
1474 rm -f $LOC_MFILE
1475 cat $MPI_MFILE | sort | uniq | head -$LOC_NPROC > $LOC_MFILE
1476 nl=`wc -l $LOC_MFILE | awk '{print $1}'`
1477 if [ $nl -lt $LOC_NPROC ] ; then
1478 rm -f $LOC_MFILE
1479 cat $MPI_MFILE | head -$LOC_NPROC > $LOC_MFILE
1480 #sed -n "1,$LOC_NPROC p" $MPI_MFILE > $LOC_MFILE
1481 fi
1482 if [ $verbose -gt 1 ]; then
1483 nl=`wc -l $LOC_MFILE | awk '{print $1}'`
1484 echo " new LOC_MFILE=$LOC_MFILE : $nl procs for LOC_NPROC=$LOC_NPROC"
1485 fi
1486 fi
1487 if test "x$MULTI_THREAD" = "xt" ; then
1488 retv=`check_eedata $dir"/input/eedata.mth" $BUILD_DIR"/SIZE.h.mpi"`
1489 if test $retv != 0 ; then
1490 echo "input/eedata.mth tiling misfit -- skipping $dir"
1491 continue
1492 fi
1493 fi
1494 fi
1495
1496 # Check whether there are "extra runs" for this testdir
1497 extra_runs=
1498 if test "x$NORUN" = xf ; then
1499 ex_run_dirs=`( cd $dir ; echo $inputdir.* )`
1500 fi
1501 #echo "ex_run_dirs='$ex_run_dirs'"
1502 for exd in $ex_run_dirs ; do
1503 name=`echo $exd | sed -e "s/$inputdir\.//"`
1504 refExOut=`echo $ref_outp | sed "s/\./.${name}./"`
1505 outf="$dir/results/$refExOut"
1506 #if test -f $outf -a -r $outf ; then
1507 if test -r $outf -o -r ${outf}.gz ; then
1508 if test "x$MULTI_THREAD" = "xt" ; then
1509 if test -r $dir"/"$exd"/eedata.mth" ; then
1510 if test "x$MPI" = "x0" ; then
1511 extra_runs="$extra_runs $name"
1512 else
1513 retv=`check_eedata $dir"/"$exd"/eedata.mth" $BUILD_DIR"/SIZE.h.mpi"`
1514 if test $retv = 0 ; then
1515 extra_runs="$extra_runs $name"
1516 else
1517 echo $exd"/eedata.mth tiling misfit -- skipping $dir"
1518 fi
1519 fi
1520 #else echo $dir"/"$exd"/eedata.mth: not found"
1521 fi
1522 else
1523 extra_runs="$extra_runs $name"
1524 fi
1525 fi
1526 done
1527
1528 echo
1529 if test "x$extra_runs" = "x" ; then
1530 echo "Experiment: $dir"
1531 else
1532 echo "Experiment: $dir ; extra_runs=$extra_runs"
1533 fi
1534 echo
1535 unset genmake makedepend make run
1536 results=$EMPTY_RESULTS
1537
1538 # Create an output dir & summary.txt file for each tested experiment (tdir)
1539 locDIR=$DRESULTS"/"$dir
1540 mkdir $locDIR
1541 #- report to this experiment local summary file ---
1542 echo "DATE='$DATE' ; tdir='$dir'" > $locDIR"/summary.txt"
1543 echo "MACH='$MACH'" >> $locDIR"/summary.txt"
1544 echo "UNAMEA='$UNAMEA'" >> $locDIR"/summary.txt"
1545 CDIR=`pwd`"/$locDIR"
1546
1547 if test "x$NORUN" = xt ; then
1548 run=N
1549 genmakemodel $dir/$builddir && genmake=Y \
1550 && makeclean $dir/$builddir \
1551 && symlink_mpifiles $dir $code_dir $builddir \
1552 && makedependmodel $dir/$builddir && makedepend=Y \
1553 && makemodel $dir/$builddir && make=Y
1554 else
1555 genmakemodel $dir/$builddir && genmake=Y \
1556 && makeclean $dir/$builddir \
1557 && symlink_mpifiles $dir $code_dir $builddir \
1558 && makedependmodel $dir/$builddir && makedepend=Y \
1559 && makemodel $dir/$builddir && make=Y \
1560 && run_clean $dir/$rundir \
1561 && linkdata $dir/$rundir $inputdir \
1562 && runmodel $dir/$rundir && run=Y \
1563 && results=`testoutput_run $dir $rundir $ref_outp`
1564 fi
1565 #echo "results='$results'"
1566
1567 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1568 echo 1>&2
1569 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1570 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt"
1571
1572 for ex in $extra_runs ; do
1573 unset run
1574 results=$EMPTY_RESULTS
1575 # reference output file
1576 refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"`
1577 # Create an output dir & summary.txt file for each extra run (tdir.ex)
1578 locDIR=$DRESULTS"/"$dir"."$ex
1579 mkdir $locDIR
1580 #- report to this experiment local summary file ---
1581 echo "DATE='$DATE' ; tdir='$dir.$ex'" > $locDIR"/summary.txt"
1582 #echo "MACH='$MACH'" >> $locDIR"/summary.txt"
1583 #echo "UNAMEA='$UNAMEA'" >> $locDIR"/summary.txt"
1584 CDIR=`pwd`"/$locDIR"
1585 test ! -e "$dir/$pfxdir.$ex" && mkdir "$dir/$pfxdir.$ex"
1586 run_clean $dir/$pfxdir.$ex
1587 linkdata $dir/$pfxdir.$ex $inputdir.$ex $inputdir
1588 runmodel $dir/$pfxdir.$ex && run=Y \
1589 && results=`testoutput_run $dir $pfxdir.$ex $refExOut`
1590 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1591 fres="$fres.$ex"
1592 echo 1>&2
1593 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1594 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt"
1595 if test "x$POSTCLEAN" = x2 ; then
1596 run_clean $dir/$pfxdir.$ex
1597 fi
1598 done
1599
1600 if test -f $DRESULTS"/"genmake_state ; then : ; else
1601 if test -f $dir/$builddir/Makefile ; then
1602 mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'`
1603 echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state
1604 sed -n '/^# executed by:/,+1 p' $dir/$builddir/Makefile >> $DRESULTS/genmake_state
1605 echo " $mkOpt" >> $DRESULTS/genmake_state
1606 if test "x$OPTFILE" = xNONE ; then
1607 eval $mkOpt
1608 sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\
1609 $SUMMARY > tr_0.tmp_log
1610 RETVAL=$?
1611 if test "x$RETVAL" = x0 ; then rm -f $SUMMARY
1612 cp tr_0.tmp_log $SUMMARY
1613 else rm -f tr_0.tmp_log
1614 fi
1615 fi
1616 gmkLog=$dir/$builddir/genmake.log
1617 grep '^Get compiler version using:' $gmkLog > /dev/null 2>&1
1618 RETVAL=$?
1619 if test "x$RETVAL" = x0 ; then
1620 echo "from '$gmkLog', extract compiler version:" >> $DRESULTS/genmake_state
1621 sed -n '/Get compiler version/,/<-- compiler version/p' $gmkLog \
1622 | grep -v '^... compiler version ' > tr_1.tmp_log
1623 sed -n '1p' tr_1.tmp_log >> $DRESULTS/genmake_state
1624 sed -n '2,/^$/p' tr_1.tmp_log | sed '/^$/d' | sed 's/^./ &/' \
1625 >> $DRESULTS/genmake_state
1626 rm -f tr_1.tmp_log
1627 fi
1628 fi
1629 fi
1630 #postclean $dir/$builddir
1631 if test "x$POSTCLEAN" = x2 ; then
1632 makeclean $dir/$builddir \
1633 && run_clean $dir/$rundir
1634 fi
1635 if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then rm -f $LOC_MFILE ; fi
1636
1637 echo "-------------------------------------------------------------------------------"
1638
1639 done
1640
1641 printf "Start time: " >> $SUMMARY
1642 echo "$start_date" >> $SUMMARY
1643 printf "End time: " >> $SUMMARY
1644 date >> $SUMMARY
1645
1646 # If addresses were supplied and mpack built successfully, then try
1647 # to send email using mpack.
1648 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1649 echo "No results email was sent."
1650 else
1651 if test "x$HAVE_MPACK" = xt ; then
1652 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1653 && gzip $DRESULTS".tar" \
1654 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1655 RETVAL=$?
1656 if test "x$RETVAL" != x0 ; then
1657 echo
1658 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1659 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1660 echo " summary of results from the directory \"$DRESULTS\"."
1661 echo
1662 else
1663 echo
1664 echo "An email containing results was sent to the following addresses:"
1665 echo " \"$ADDRESSES\""
1666 echo
1667 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1668 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1669 fi
1670 fi
1671 fi
1672
1673 if test "x$QUICK" = xf -a "x$NORUN" = xf ; then
1674 rm -f tr_cmpnum.c tr_cmpnum
1675 fi
1676
1677 if test "x$CLEANUP" != xt ; then
1678 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'
1679 if test -e tr_out.txt ; then
1680 mv tr_out.txt tr_out.txt.old
1681 fi
1682 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt
1683 fi
1684
1685 if test "x$DELDIR" = xt ; then
1686 rm -rf $DRESULTS
1687 fi

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