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Revision 1.121 - (show annotations) (download)
Fri Jan 30 20:08:09 2009 UTC (15 years, 2 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint61l, checkpoint61j, checkpoint61k, checkpoint61i
Changes since 1.120: +4 -1 lines
make default ouput dir name from "short" hostname

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.120 2009/01/29 21:45:43 utke Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi threaded (using eedata.mth)"
15 echo " (-mpi) compile and run using MPI"
16 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
17 echo " (DEF=\"-ieee\")"
18 echo " (-gsl) compile with \"-gsl\" flag"
19 echo " (-of=|-optfile=)STRING list of optfiles to use"
20 echo " (-a|-addr) STRING list of email recipients"
21 echo " (DEF=\"\" no email is sent)"
22 echo " (-mpd|-mpackdir) DIR location of the mpack utility"
23 echo " (DEF=\"../tools/mpack-1.6\")"
24 echo " (-t|-tdir) STRING list of group and/or exp. dirs to test"
25 echo " (recognized groups: basic, tutorials)"
26 echo " (DEF=\"\" which test all)"
27 echo " (-skd|-skipdir) STRING list of exp. dirs to skip"
28 echo " (DEF=\"\" which test all)"
29 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
30 echo " Bourne-compatible \"sh\" shell"
31 echo " (DEF=\"\" for \"bash\")"
32 echo " (-adm|-ad) perform an adjoint run"
33 echo " (-oad) perform an OpenAD adjoint run"
34 echo " (-command) STRING command to run"
35 echo " (DEF=\"make output.txt\")"
36 echo " (-m|-make) STRING command to use for \"make\""
37 echo " (DEF=\"make\")"
38 echo " (-odir) STRING used to build output directory name"
39 echo " (DEF=\"hostname\")"
40 echo " (-ptr|-ptracers) STRING specify which ptracers to test"
41 echo " (DEF=\"1 2 3 4 5\")"
42 echo " (-match) NUMBER Matching Criteria (number of digits)"
43 echo " (DEF=\"12\")"
44 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
45 echo " (-clean) *ONLY* run \"make CLEAN\""
46 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
47 echo " (-nogenmake|-ng) skip the genmake stage"
48 echo " (-noclean|-nc) skip the \"make clean\" stage"
49 echo " (-nodepend|-nd) skip the \"make depend\" stage"
50 echo " (-deldir|-dd) on success, delete the output directory"
51 echo " (-ts) provide timing information per timestep"
52 echo " (-papis) provide MFlop/s per timestep using PAPI"
53 echo " (-pcls) provide MFlop/s per timestep using PCL"
54 echo
55 echo "and where STRING can be a whitespace-delimited list"
56 echo "such as:"
57 echo
58 echo " -t 'exp0 exp2 exp3' "
59 echo " -addr='abc@123.com testing@home.org'"
60 echo
61 echo "provided that the expression is properly quoted within the current"
62 echo "shell (note the use of single quotes to protect white space)."
63 echo
64 exit 1
65 }
66
67 # build the mpack utility
68 build_mpack()
69 {
70 printf "building the mpack utility... "
71 MPACK="$MPACKDIR/mpack"
72 if test ! -x $MPACK ; then
73 if test ! -d $MPACKDIR ; then
74 echo
75 echo "Error: can't find \"$MPACKDIR\""
76 echo " are you sure this program is being run in the correct "
77 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
78 echo
79 HAVE_MPACK=f
80 fi
81 if test "x$CC" = x ; then
82 export CC=cc
83 fi
84 printf "building mpack (using CC=$CC)... "
85 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
86 RETVAL=$?
87 if test "x$RETVAL" != x0 ; then
88 echo
89 echo "Error building the mpack tools at: $MPACK_DIR"
90 echo
91 HAVE_MPACK=f
92 else
93 rm -f tr_build_mpack.out
94 HAVE_MPACK=t
95 echo "done"
96 fi
97 else
98 HAVE_MPACK=t
99 echo "already exist"
100 fi
101 }
102
103 testoutput_var()
104 {
105 # testoutput_var dir s1 label subdir reference_output
106 #
107 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
108 # with same output from reference file $dir/results/$reference_output
109 # using search strings s1 and text label
110
111 if [ $debug -gt 0 ]; then
112 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
113 fi
114 if [ -r $1/$4/$OUTPUTFILE ]; then
115 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
116 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
117 if [ $lncntA -lt 2 ]; then
118 if [ $verbose -gt 0 ]; then
119 echo Not enough lines of output when searching for "$2" 1>&2
120 fi
121 return 99
122 fi
123 else
124 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
125 return 99
126 fi
127 if [ $debug -gt 0 ]; then
128 echo testoutput_var: grep "$2" $1/results/$5 1>&2
129 fi
130 grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt
131 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
132 if [ $lncntB -lt 2 ]; then
133 if [ $verbose -gt 0 ]; then
134 echo Not enough lines of output when searching for "$2" 1>&2
135 fi
136 return 99
137 fi
138 if [ $lncntA -ne $lncntB ]; then
139 if [ $verbose -gt 0 ]; then
140 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
141 fi
142 return 99
143 fi
144 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
145 if [ $has_nan -gt 0 ] ; then
146 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
147 return 99
148 fi
149 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
150 if [ $has_inf -gt 0 ] ; then
151 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
152 return 99
153 fi
154 if [ $debug -gt 0 ]; then
155 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
156 fi
157 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
158 if [ $debug -gt 0 ]; then
159 echo testoutput_var: compare_lines 1>&2
160 fi
161 if [ $verbose -gt 1 ]; then
162 cat tmp3.txt 1>&2
163 fi
164 echo "-1" >> tmp3.txt
165 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
166 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
167 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
168 if [ $digits_of_similarity -eq 99 ]; then
169 if [ $verbose -gt 0 ]; then
170 echo testoutput_var: No comparison was available for \"$3\" 1>&2
171 fi
172 digits_of_similarity=99
173 else
174 if [ $verbose -gt 0 ]; then
175 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
176 fi
177 fi
178 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
179
180 return $digits_of_similarity
181 }
182
183 testoutput_run()
184 {
185 # testoutput_run directory subdir reference_output
186 #
187 # test output from 1 run in "directory"
188 # --> same processing for adjoint & forward test
189 # default list of output variables to be checked:
190 # 1rst : main variable used to decide if it pass or FAIL
191 # others : number of matching digits to be printed in summary.txt
192 listChk=$DEF_CHECK_LIST
193 # load experiment-specific list from file "tr_checklist" (if it exist)
194 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
195 sVar=`echo $listChk | awk '{print $1}'`
196 # remove 1rst var and expand the list: + => min max mean s.d
197 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
198 | sed 's/+//g' | sed "s/^$sVar//"`
199 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
200 # check for ptracer output in reference_output file :
201 outpref=$1/results/$3
202 ptr_mon="trcstat_ptracerXX_min trcstat_ptracerXX_max"
203 ptr_mon="$ptr_mon trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
204 for ii in $PTRACERS_NUM ; do
205 ptrfound=0
206 for jj in $ptr_mon ; do
207 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
208 tst=`grep $name $outpref | wc -l | awk '{print $1}'`
209 if test ! "x$tst" = x0 ; then ptrfound=1 ; fi
210 done
211 if test $ptrfound = '1' ; then
212 eval "HAVE_PTR0"$ii"=t"
213 else
214 eval "HAVE_PTR0"$ii"=f"
215 if test "x$ADM" = x -a "x$OADM" = x; then
216 # remove this ptr from the list of output variable to check
217 # echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
218 listVar=`echo "$listVar" | sed "s/ pt$ii..//g"`
219 fi
220 fi
221 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' 1>&2
222 done
223 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'`
224 if test $tst != 1 ; then
225 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
226 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
227 echo "==> WARNING: in checked list:" $listVar 1>&2
228 #- put it back once:
229 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
230 fi
231 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
232 echo "listVar='$listVar'" > $CDIR"/summary.txt"
233 allargs=""
234 for xx in $listVar
235 do
236 case $xx in
237 'PS') if [ $debug -gt 0 ]
238 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
239 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$?
240 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
241 'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;;
242 'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;;
243 'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;;
244 'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;;
245 'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;;
246 'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;;
247 'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;;
248 'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;;
249 'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;;
250 'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;;
251 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;;
252 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;;
253 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;;
254 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;;
255 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;;
256 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;;
257 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;;
258 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;;
259 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
260 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;;
261 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
262 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;;
263 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
264 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;;
265 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
266 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;;
267 'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;;
268 'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;;
269 'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;;
270 'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;;
271 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;;
272 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;;
273 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;;
274 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;;
275 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;;
276 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;;
277 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;;
278 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;;
279 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;;
280 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;;
281 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;;
282 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;;
283 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;;
284 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;;
285 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
286 esac
287 if test $xx = $sVar
288 then allargs="$allargs > $yy <"
289 else allargs="$allargs $yy"
290 fi
291 done
292
293 nbVar=`echo $listVar | awk '{print NF}'`
294 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
295 #-- fill line (up to standard length) with dot:
296 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
297 echo $allargs $adNul
298 else
299 echo $allargs
300 fi
301 # <-- same processing for adjoint & forward test
302 }
303
304 genmakemodel()
305 {
306 # genmakemodel directory
307 if test "x$NOGENMAKE" = xt ; then
308 echo "genmake skipped!"
309 else
310 if test "x$BASH" = x ; then
311 GENMAKE2="../../../tools/genmake2"
312 else
313 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
314 fi
315 (
316 cd $1;
317 command="$GENMAKE2 -ds -m $MAKE"
318 if test "x$ADM" = xt ; then
319 command="$command --mods=../code_ad"
320 elif test "x$OADM" = xt ; then
321 command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'"
322 else
323 command="$command --mods=../code"
324 fi
325 if test "x$OPTFILE" != xNONE ; then
326 command="$command --optfile=$OPTFILE"
327 fi
328 if test "x$IEEE" != x ; then
329 command="$command -ieee"
330 fi
331 if test "x$GSL" = xt ; then
332 command="$command -gsl"
333 fi
334 if test "x$MPI" = xt ; then
335 command="$command -mpi"
336 fi
337 if test "x$TS" = xt ; then
338 command="$command -ts"
339 fi
340 if test "x$PAPIS" = xt ; then
341 command="$command -papis"
342 else
343 if test "x$PCLS" = xt ; then
344 command="$command -pcls"
345 fi
346 fi
347 printf 'genmake ... ' 1>&2
348 # $command > make.log 2>&1
349 eval $command > make.log 2>&1
350 RETVAL=$?
351 # Reduce the size of the testing emails!
352 head -100 Makefile > $CDIR/Makefile_head
353 if test "x$RETVAL" != x0 ; then
354 tail make.log
355 echo "genmakemodel: genmake failed" 1>&2
356 cp genmake_* make.log $CDIR
357 return 1
358 else
359 echo "successful" 1>&2
360 fi
361 )
362 fi
363 }
364
365 makeclean()
366 {
367 # makeclean directory
368 if test "x$NOCLEAN" = xt ; then
369 echo "make Clean skipped!"
370 else
371 (
372 cd $1;
373 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
374 if test -r Makefile ; then
375 printf 'clean build-dir: make Clean ... ' 2>&1
376 $MAKE Clean >> make.log 2>&1
377 RETVAL=$?
378 if test "x$RETVAL" != x0 ; then
379 tail make.log
380 echo "makeclean: \"make Clean\" failed" 1>&2
381 cp make.log $CDIR"/make.log"
382 return 1
383 fi
384 fi
385 echo successful 1>&2
386 exit 0
387 )
388 fi
389 }
390
391 run_clean()
392 {
393 # run_clean directory
394 if test "x$NOCLEAN" = xt ; then
395 echo "run_clean skipped!"
396 else
397 (
398 cd $1;
399 printf 'clean run-dir ... ' 2>&1
400 # part of what is done after "make clean" when doing "make CLEAN"
401 find . -name "*.meta" -exec rm {} \;
402 find . -name "*.data" -exec rm {} \;
403 find . -name "fort.*" -exec rm {} \;
404 find . -type l -exec rm {} \;
405 rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime
406 rm -rf mnc_test_*
407 rm -f *_MIT_CE_000.opt0000 costfunction*0000
408 echo successful 1>&2
409 exit 0
410 )
411 fi
412 }
413
414 makedependmodel()
415 {
416 # makedependmodel directory
417 if test "x$NODEPEND" = xt ; then
418 echo "make depend skipped!"
419 else
420 (
421 cd $1;
422 printf 'make depend ... ' 1>&2
423 $MAKE depend >> make.log 2>&1
424 RETVAL=$?
425 if test "x$RETVAL" != x0 ; then
426 tail make.log
427 echo "makedependmodel: make depend failed" 1>&2
428 cp make.log $CDIR"/make.log"
429 return 1
430 else
431 echo successful 1>&2
432 fi
433 )
434 fi
435 }
436
437 makemodel()
438 {
439 # makemodel directory
440 (
441 cd $1;
442 if test -r Makefile ; then
443 printf 'make ... ' 1>&2
444 if test "x$ADM" = xt ; then
445 $MAKE adall >> make.log 2>&1
446 elif test "x$OADM" = xt ; then
447 $MAKE adAll >> make.log 2>&1
448 else
449 if test "x$JOBS" = x ; then
450 $MAKE >> make.log 2>&1
451 else
452 $MAKE -j $JOBS >> make.log 2>&1
453 fi
454 fi
455 RETVAL=$?
456 if test "x$RETVAL" != x0 ; then
457 tail make.log
458 echo failed 1>&2
459 cp make.log $CDIR"/make.log"
460 return 1
461 else
462 echo successful 1>&2
463 fi
464 fi
465 )
466 }
467
468 symlink_mpifiles()
469 {
470 # Put special links so that MPI specific files are used
471 # This MUST be invoked between makeclean and makelinks because
472 # the Makefile will link to non-mpi files by default
473
474 dir=$1
475 code_dir=$2
476 BUILD_DIR=$dir/$3
477 CODE_DIR=$dir/$code_dir
478
479 # These are files that should replace their counter-part when using -mpi
480 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi" -print)`
481
482 # Is this an MPI run?
483 if test "x$MPI" = xt ; then
484 # YES: We symbolically link these files to the build
485 # dir so long as there is no real file in place
486 for ii in $MPI_FILES ; do
487 i=`echo $ii | sed 's:^\./::'`
488 name=`echo $i | sed 's:_mpi::' `
489 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
490 RETVAL=$?
491 if test "x$RETVAL" != x0 ; then
492 if ! test -f $BUILD_DIR/$i ; then
493 #echo Linking $name to $i
494 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
495 fi
496 fi
497 done
498 else
499 # NO: We undo any _mpi symbolically linked files
500 for ii in $MPI_FILES ; do
501 i=`echo $ii | sed 's:^\./::'`
502 name=`echo $i | sed 's:_mpi::' `
503 if test -L $BUILD_DIR/$name ; then
504 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
505 RETVAL=$?
506 if test "x$RETVAL" = x0 ; then
507 #echo Un-linking $name from $linktarg
508 rm -f $BUILD_DIR/$name
509 fi
510 fi
511 done
512 fi
513
514 }
515
516 linkdata()
517 {
518 # linkdata run_dir input_dir_1 input_dir_2 ...
519 #
520 # symbolically link data files to run directory
521 if test -d $1 ; then
522 (
523 cd $1 ; shift
524 if test -r "../"$1"/eedata.mth" ; then
525 # found eedata.mth in 1rst input dir and it is readable
526 if test "x$MULTI_THREAD" = "xt" ; then
527 # multi-threaded test: remove symbolic link & link eedata.mth
528 if test -h eedata ; then rm -f eedata ; fi
529 if test ! -r eedata ; then
530 ln -sf "../"$1"/eedata.mth" eedata ;
531 printf 'eedata.mth ' 1>&2
532 fi
533 else
534 # not multi-threaded test: remove eedata symbolic link
535 if test -h eedata ; then rm -f eedata ; fi
536 fi
537 fi
538 prevDir='NONE'
539 for ldir in $* ; do
540 if test -d "../"$ldir -a $ldir != $prevDir ; then
541 printf 'ldir='${ldir} 1>&2
542 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
543 for i in $files ; do
544 if test ! -d "../"$ldir/$i ; then
545 if test ! -r $i ; then
546 printf ' '$i 1>&2
547 ln -sf "../"$ldir"/"$i $i
548 fi
549 fi
550 done
551 if test -x "../"$ldir"/"prepare_run ; then
552 "../"$ldir"/"prepare_run
553 fi
554 printf ' ; ' 1>&2
555 fi
556 prevDir=$ldir
557 done
558 )
559 fi
560 }
561
562 runmodel()
563 {
564 # runmodel directory
565 #
566 # runs "$COMMAND in "directory"
567 # (where "$COMMAND" is relative to "directory")
568 (
569 cd $1
570 printf 'runmodel in %s ...' $1 1>&2
571 # make output.txt
572 echo
573 if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
574 diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1
575 outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; fi
576 fi
577 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
578 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp
579 ln -sf "../"$builddir"/"$EXECUTABLE .
580 fi
581 if test ! -x $EXECUTABLE ; then
582 rm -f $RUNLOG ; touch $RUNLOG
583 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
584 echo " no executable:" $EXECUTABLE >> $RUNLOG
585 RETVAL=8
586 ENDVAL=-1
587 else
588 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
589 # output do not exist or is older than executable:
590 rm -f $RUNLOG ; touch $RUNLOG
591 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
592 ( eval $COMMAND ) >> $RUNLOG 2>&1
593 RETVAL=$?
594 else
595 RETVAL=0
596 if test -f $RUNLOG ; then
597 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
598 echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1
599 else
600 touch $RUNLOG
601 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
602 echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1
603 echo " no previous $RUNLOG: assume NORMAL END" >> $RUNLOG 2>&1
604 fi
605 fi
606 ENDVAL=`cat $RUNLOG | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'`
607 fi
608 rm -f run.log_tmp
609 #if test "x$RETVAL" = x0 ; then
610 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
611 tail $RUNLOG
612 echo successful 1>&2
613 # === Reduce the size of the testing emails!
614 #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE
615 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
616 return 0
617 else
618 tail $RUNLOG
619 echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2
620 cp $RUNLOG $CDIR"/"$RUNLOG
621 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
622 return 1
623 fi
624 )
625 }
626
627 createcodelet()
628 {
629 # create codelet for comparing model output
630
631 printf "creating the comparison code (using CC=$CC)... "
632 cat > tr_cmpnum.c <<EOF
633 #include <stdio.h>
634 #include <math.h>
635 int main( int argc, char** argv ) {
636 int linnum,cmplin,best,lncnt;
637 double a,b,abave,relerr;
638 best = -22;
639 lncnt = 0;
640 while( 1 & ( (lncnt+=1) < 999 ) ) {
641 scanf("%d", &linnum);
642 if (linnum == -1) break;
643 scanf("%lf", &a); scanf("%lf", &b);
644 abave = 0.5*(fabs(a)+fabs(b));
645 if ( abave == abave ) {
646 if (abave > 0.0) {
647 relerr=fabs(a-b)/abave;
648 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
649 else { cmplin = -16 ; }
650 best = (best > cmplin) ? best : cmplin; }
651 else { cmplin = -22 ; }
652 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
653 }
654 else {
655 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
656 break; }
657 }
658 if (lncnt == 999) best=-29;
659 if (linnum != -1) best=-99;
660 printf("%d\n", -best);
661 return 0;
662 }
663 EOF
664 $CC -o tr_cmpnum tr_cmpnum.c -lm
665
666 if [ -x ./tr_cmpnum ]; then
667 echo "OK"
668 return 0
669 else
670 echo
671 echo "ERROR: failed to compile comparison code -- please specify"
672 echo " a C compiler using the CC environment variable."
673 exit 1
674 fi
675 }
676
677 formatresults()
678 {
679 # formatresults expt genmake depend make run results*
680
681 nm=$1
682 printf '%s %s %s %s' $2 $3 $4 $5
683 shift; shift; shift; shift; shift;
684 listPrt=$@
685 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
686 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
687 printf '%3s' $listPrt
688 # line below does not work on hp-ux_ia64 : do those substitutions later on
689 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
690
691 if [ $xx = '..' ]; then
692 printf ' N/O '
693 elif [ $xx = '--' ]; then
694 printf ' N/O '
695 elif [ $xx = 99 ]; then
696 printf ' N/O '
697 else
698 if [ $xx -ge $MATCH_CRIT ]; then
699 printf ' pass'
700 else
701 printf ' FAIL'
702 fi
703 fi
704 printf ' %s' $nm
705 printf '\n'
706
707 }
708
709 scandirs()
710 {
711 if [ $# -eq 1 ]; then
712 for arg in * ; do
713 test -f $arg/$1 && echo $arg
714 done
715 else
716 echo $*
717 fi
718 }
719
720
721 ###############################################################################
722
723
724 # Default properties
725 debug=0
726 verbose=1
727 clean=0
728
729 IEEE=true
730 if test "x$MITGCM_IEEE" != x ; then
731 IEEE=$MITGCM_IEEE
732 fi
733 GSL=f
734
735 CLEANUP=f
736 QUICK=f
737 NOGENMAKE=f
738 NOCLEAN=f
739 NODEPEND=f
740 POSTCLEAN=f
741
742 BASH=
743 OPTFILE=NONE
744 ADDRESSES=
745 TESTDIRS=
746 SKIPDIRS=
747 MPACKDIR="../tools/mpack-1.6"
748 HAVE_MPACK=
749 MPACK=
750 COMMAND=
751 if test "x$MAKE" = x ; then
752 MAKE=make
753 fi
754 if test "x$CC" = x ; then
755 CC=cc
756 fi
757 JOBS=
758 MPI=f
759 MULTI_THREAD=f
760 OUTDIR=
761 DELDIR=
762
763 ADM=
764 OADM=
765
766 # list of pTracers to check for monitor output
767 PTRACERS_NUM="1 2 3 4 5"
768
769 MATCH_CRIT=13
770
771 printf "parsing options... "
772
773 ac_prev=
774 for ac_option ; do
775
776 # If the previous option needs an argument, assign it.
777 if test -n "$ac_prev"; then
778 eval "$ac_prev=\$ac_option"
779 ac_prev=
780 continue
781 fi
782
783 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
784
785 case $ac_option in
786
787 -help | --help | -h | --h)
788 usage ;;
789
790 -optfile | --optfile | -of | --of)
791 ac_prev=OPTFILE ;;
792 -optfile=* | --optfile=* | -of=* | --of=*)
793 OPTFILE=$ac_optarg ;;
794
795 -addr | --addr | -a | --a)
796 ac_prev=ADDRESSES ;;
797 -addr=* | --addr=*)
798 ADDRESSES=$ac_optarg ;;
799 -mpackdir | --mpackdir | -mpd | --mpd)
800 ac_prev=MPACKDIR ;;
801 -mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*)
802 MPACKDIR=$ac_optarg ;;
803
804 -tdir | --tdir | -t | --t)
805 ac_prev=TESTDIRS ;;
806 -tdir=* | --tdir=*)
807 TESTDIRS=$ac_optarg ;;
808
809 -skipdir | --skipdir | -skd | --skd)
810 ac_prev=SKIPDIRS ;;
811 -skipdir=* | --skipdir=*)
812 SKIPDIRS=$ac_optarg ;;
813
814 -bash | --bash | -b | --b)
815 ac_prev=BASH ;;
816 -bash=* | --bash=*)
817 BASH=$ac_optarg ;;
818
819 -command | --command | -c | --c)
820 ac_prev=COMMAND ;;
821 -command=* | --command=*)
822 COMMAND=$ac_optarg ;;
823
824 -make | --make | -m | --m)
825 ac_prev=MAKE ;;
826 -make=* | --make=*)
827 MAKE=$ac_optarg ;;
828
829 -odir | --odir)
830 ac_prev=OUTDIR ;;
831 -odir=* | --odir=*)
832 OUTDIR=$ac_optarg ;;
833
834 -ptracers | --ptracers | -ptr | --ptr)
835 ac_prev=PTRACERS_NUM ;;
836 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
837 PTRACERS_NUM=$ac_optarg ;;
838
839 -match | --match ) ac_prev=MATCH_CRIT ;;
840 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
841
842 -j) ac_prev=JOBS ;;
843 -j=*) JOBS=$ac_optarg ;;
844
845 -clean | --clean)
846 CLEANUP=t ; DELDIR=t ;;
847
848 -quick | --quick | -q | --q)
849 QUICK=t ;;
850 -nogenmake | --nogenmake | -ng | --ng)
851 NOGENMAKE=t ;;
852 -noclean | --noclean | -nc | --nc)
853 NOCLEAN=t ;;
854 -nodepend | --nodepend | -nd | --nd)
855 NODEPEND=t ;;
856
857 -postclean | --postclean | -pc | --pc)
858 POSTCLEAN=t ;;
859
860 -mpi) MPI=t ;;
861
862 -mth) MULTI_THREAD=t ;;
863
864 -adm | -ad) ADM=t ;;
865
866 -oad) OADM=t; NODEPEND=t ;;
867
868 -ieee) IEEE=true ;;
869 -noieee) IEEE= ;;
870 -gsl) GSL=t ;;
871
872 -verbose) verbose=2 ;;
873 -debug) debug=1 ;;
874 -quiet) verbose=0 ;;
875
876 -deldir | -dd) DELDIR=t ;;
877
878 -ts) TS=t;;
879
880 -papis) PAPIS=t;;
881
882 -pcls) PCL=t;;
883
884 -*)
885 echo "Error: unrecognized option: "$ac_option
886 usage
887 ;;
888
889 *)
890 echo "Error: unrecognized argument: "$ac_option
891 usage
892 ;;
893
894 esac
895
896 done
897
898 if test "x$QUICK" = xt ; then
899 NOGENMAKE=t
900 NOCLEAN=t
901 NODEPEND=t
902 fi
903
904 #- setting for forward or ADM testing
905 if test "x$ADM" = xt ; then
906 code_dir=code_ad
907 inputdir=input_ad
908 ref_outp="output_adm.txt"
909 EXECUTABLE="mitgcmuv_ad"
910 elif test "x$OADM" = xt ; then
911 code_dir=code_oad
912 inputdir=input_oad
913 ref_outp="output_oadm.txt"
914 EXECUTABLE="mitgcmuv_ad"
915 else
916 code_dir=code
917 inputdir=input
918 ref_outp="output.txt"
919 EXECUTABLE="mitgcmuv"
920 fi
921
922 if test "x$TESTDIRS" = x ; then
923 LIST=`scandirs results/$ref_outp`
924 else
925 #- expand group of experiments:
926 LIST=" "
927 for xx in $TESTDIRS
928 do
929 case $xx in
930 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
931 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
932 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
933 ;;
934 'tutorials')
935 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
936 *) LIST=${LIST}" "$xx ;;
937 esac
938 done
939 fi
940 #echo 'LIST='${LIST}'<'
941 #- skip dirs, remove duplicate and non-directory:
942 TESTDIRS=" "
943 count=0
944 for xx in $LIST
945 do
946 yy=`echo $SKIPDIRS | grep -c $xx`
947 if test $yy = 0 ; then
948 if test -d $xx ; then
949 yy=`echo $TESTDIRS | grep -c $xx`
950 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
951 else count=1 ;
952 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
953 fi
954 else
955 if test $count = 1 ; then echo -n ", \"$xx\""
956 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
957 fi
958 fi
959 done
960 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
961 #echo 'TESTDIRS='${TESTDIRS}'<'
962
963 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
964 OPTFILE=$MITGCM_OF
965 fi
966
967 RUNLOG="run.log"
968 OUTPUTFILE=$ref_outp
969 if test "x$COMMAND" = x ; then
970 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
971 fi
972 if test "x$MPI" = xt ; then
973 OUTPUTFILE="STDOUT.0000"
974 fi
975
976 echo "OK (COMMAND= $COMMAND )"
977
978 # set the Default List of output variables to be checked:
979 # (use default or load experiment-specific list from file "tr_checklist")
980 # content : 1rst = main variable used to decide if it pass or FAIL
981 # others = number of matching digits to be printed in summary.txt
982 if test "x$ADM" = x -a "x$OADM" = x; then
983 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
984 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
985 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
986 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
987 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
988 else
989 DEF_CHECK_LIST='Grad Cost Grad'
990 EMPTY_RESULTS='.. ..'
991 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
992 fi
993
994 # create the FORTRAN comparison code
995 createcodelet
996
997 # build the mpack utility (if ADDRESSES = NONE, do it to test the build)
998 if test "x$ADDRESSES" = x ; then
999 echo "skipping mpack build"
1000 else
1001 build_mpack
1002 fi
1003
1004 # Create a uniquely named directory to store results
1005 CMDLINE=$0
1006 for xx in "$@" ; do nw=`echo $xx | wc -w`
1007 if test $nw = '1' ; then CMDLINE="$CMDLINE $xx"
1008 else CMDLINE="$CMDLINE '$xx'" ; fi
1009 done
1010 #for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done
1011 MACH=`hostname`
1012 UNAMEA=`uname -a`
1013 DATE=`date +%Y%m%d`
1014 BASE="tr_"$MACH"_"$DATE"_"
1015 if test "x$OUTDIR" != x ; then
1016 BASE="tr_"$OUTDIR"_"$DATE"_"
1017 else
1018 short_name=`hostname | sed 's/\..*$//'`
1019 BASE="tr_"$short_name"_"$DATE"_"
1020 fi
1021 DNUM=0
1022 DRESULTS="$BASE$DNUM"
1023 while test -e $DRESULTS ; do
1024 DNUM=$(( $DNUM + 1 ))
1025 DRESULTS="$BASE$DNUM"
1026 done
1027 mkdir $DRESULTS
1028 RETVAL=$?
1029 if test "x$RETVAL" != x0 ; then
1030 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1031 exit 1
1032 fi
1033 SUMMARY="$DRESULTS/summary.txt"
1034 start_date=`date`
1035 echo $start_date > $SUMMARY
1036 echo 'run:' $CMDLINE >> $SUMMARY
1037 echo 'on :' $UNAMEA >> $SUMMARY
1038
1039 of_path=
1040 if test "x$OPTFILE" != xNONE ; then
1041 if test -r $OPTFILE ; then
1042 # get the path
1043 path=${OPTFILE%/*}
1044 if test "x$path" = x ; then
1045 of_path=`pwd`
1046 else
1047 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1048 fi
1049 file=${OPTFILE##*/}
1050 OPTFILE=$of_path/$file
1051 cp $OPTFILE $DRESULTS
1052 echo >> $SUMMARY
1053 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1054 else
1055 echo | tee $SUMMARY
1056 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1057 exit 1
1058 fi
1059 else
1060 echo >> $SUMMARY
1061 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
1062 echo " so the genmake default will be used." >> $SUMMARY
1063 fi
1064 echo
1065 echo >> $SUMMARY
1066 if test "x$ADM" = x -a "x$OADM" = x; then
1067 if [ $MATCH_CRIT -lt 10 ] ;
1068 then line_0="default "$MATCH_CRIT ;
1069 else line_0="default "$MATCH_CRIT ; fi
1070 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1071 # line_0=" ----T----- ----S----- ----U----- ----V-----"
1072 line_1="G D M c m s m s m s m s"
1073 line_2="E p a R g m m e . m m e . m m e . m m e ."
1074 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
1075 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1076 for ii in $PTRACERS_NUM ; do
1077 line_0="$line_0 --PTR 0"$ii"--"
1078 line_1="$line_1 m s"
1079 line_2="$line_2 m m e ."
1080 line_3="$line_3 i a a d"
1081 line_4="$line_4 n x n ."
1082 done
1083 echo "$line_0" | tee -a $SUMMARY
1084 echo "$line_1" | tee -a $SUMMARY
1085 echo "$line_2" | tee -a $SUMMARY
1086 echo "$line_3" | tee -a $SUMMARY
1087 echo "$line_4" | tee -a $SUMMARY
1088 echo " " | tee -a $SUMMARY
1089 else
1090 echo "ADJOINT=true" >> $SUMMARY
1091 echo >> $SUMMARY
1092 if [ $MATCH_CRIT -lt 10 ] ;
1093 then line_0="default "$MATCH_CRIT ;
1094 else line_0="default "$MATCH_CRIT ; fi
1095 echo "$line_0" | tee -a $SUMMARY
1096 cat << EOF | tee -a $SUMMARY
1097 G D M C G
1098 E p a R o r
1099 N n k u s a
1100 2 d e n t d
1101
1102 EOF
1103 fi
1104
1105 # ...and each test directory...
1106 for dir in $TESTDIRS ; do
1107
1108 # set builddir & rundir:
1109 builddir="build"
1110 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1111 rundir="run"
1112 if test ! -d $dir/$rundir ; then
1113 rundir=$builddir
1114 fi
1115 CODE_DIR=$dir/$code_dir
1116 BUILD_DIR=$dir/$builddir
1117
1118 # Cleanup only!
1119 if test "x$CLEANUP" = xt ; then
1120 if test -r $BUILD_DIR/Makefile ; then
1121 echo ' ------ clean dir:' $dir/$builddir
1122 ( cd $BUILD_DIR ; make CLEAN )
1123 fi
1124 if test -d $dir/$rundir/CVS ; then
1125 echo ' ------ clean dir:' $dir/$rundir
1126 run_clean $dir/$rundir
1127 fi
1128 (
1129 cd $dir
1130 rm -rf tr_run.*
1131 )
1132 continue
1133 fi
1134
1135 # Verify that the testdir exists and contains previous
1136 # results in the correct location--or skip this directory!
1137 fout=$dir"/results/"$ref_outp
1138 if test ! -r $fout ; then
1139 echo "can't read \"$fout\" -- skipping $dir"
1140 continue
1141 fi
1142
1143 # Check for specific files for particular type of run
1144
1145 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
1146 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1147 continue
1148 fi
1149 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1150 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1151 continue
1152 fi
1153
1154 # Check whether there are "extra runs" for this testdir
1155 extra_runs=
1156 ex_run_dirs=`( cd $dir ; echo $inputdir.* )`
1157 #echo "ex_run_dirs='$ex_run_dirs'"
1158 for exd in $ex_run_dirs ; do
1159 name=`echo $exd | sed -e "s/$inputdir\.//"`
1160 refExOut=`echo $ref_outp | sed "s/\./.${name}./"`
1161 outf="$dir/results/$refExOut"
1162 if test -f $outf -a -r $outf ; then
1163 if test "x$MULTI_THREAD" = "xt" ; then
1164 if test -r $dir"/"$exd"/eedata.mth" ; then
1165 extra_runs="$extra_runs $name"
1166 #else echo $dir"/"$exd"/eedata.mth: not found"
1167 fi
1168 else
1169 extra_runs="$extra_runs $name"
1170 fi
1171 fi
1172 done
1173
1174 echo "-------------------------------------------------------------------------------"
1175 echo
1176 if test "x$extra_runs" = "x" ; then
1177 echo "Experiment: $dir"
1178 else
1179 echo "Experiment: $dir ; extra_runs=$extra_runs"
1180 fi
1181 echo
1182 unset genmake makedepend make run
1183 results=$EMPTY_RESULTS
1184
1185 # Create an output dir for each OPTFILE/tdir combination
1186 rel_CDIR=$DRESULTS"/"$dir
1187 mkdir $rel_CDIR
1188 CDIR=`pwd`"/$rel_CDIR"
1189
1190 if test "x$CLEANUP" = xt ; then
1191 echo '====>>> this is to check that we never go through this part <<< ==='
1192 makeclean $dir/$builddir \
1193 && run_clean $dir/$rundir
1194 else
1195 genmakemodel $dir/$builddir && genmake=Y \
1196 && makeclean $dir/$builddir \
1197 && run_clean $dir/$rundir \
1198 && symlink_mpifiles $dir $code_dir $builddir \
1199 && makedependmodel $dir/$builddir && makedepend=Y \
1200 && makemodel $dir/$builddir && make=Y \
1201 && linkdata $dir/$rundir $inputdir input \
1202 && runmodel $dir/$rundir && run=Y \
1203 && results=`testoutput_run $dir $rundir $ref_outp`
1204 fi
1205
1206 echo
1207 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1208 echo
1209 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1210 touch $CDIR"/summary.txt"
1211 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1212 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1213 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1214 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1215 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1216 if test "x$ADM" = xt ; then
1217 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1218 grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \
1219 >> $CDIR"/summary.txt"
1220 fi
1221
1222 for ex in $extra_runs ; do
1223 unset run
1224 results=$EMPTY_RESULTS
1225 # reference output file
1226 refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"`
1227 # Create an output dir for each OPTFILE/tdir.ex combination
1228 rel_CDIR=$DRESULTS"/"$dir"."$ex
1229 mkdir $rel_CDIR
1230 CDIR=`pwd`"/$rel_CDIR"
1231 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
1232 run_clean $dir/tr_run.$ex
1233 linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input
1234 runmodel $dir/tr_run.$ex && run=Y \
1235 && results=`testoutput_run $dir tr_run.$ex $refExOut`
1236 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1237 fres="$fres.$ex"
1238 echo
1239 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1240 touch $CDIR"/summary.txt"
1241 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1242 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1243 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1244 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1245 echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt"
1246 if test "x$ADM" = xt ; then
1247 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1248 grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \
1249 >> $CDIR"/summary.txt"
1250 fi
1251 if test "x$POSTCLEAN" = xt ; then
1252 run_clean $dir/tr_run.$ex
1253 fi
1254 done
1255
1256 #postclean $dir/$builddir
1257 if test "x$POSTCLEAN" = xt ; then
1258 makeclean $dir/$builddir \
1259 && run_clean $dir/$rundir
1260 fi
1261
1262 echo "-------------------------------------------------------------------------------"
1263
1264 done
1265
1266 printf "Start time: " >> $SUMMARY
1267 echo "$start_date" >> $SUMMARY
1268 printf "End time: " >> $SUMMARY
1269 date >> $SUMMARY
1270
1271 # If addresses were supplied and mpack built successfully, then try
1272 # to send email using mpack.
1273 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1274 echo "No results email was sent."
1275 else
1276 if test "x$HAVE_MPACK" = xt ; then
1277 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1278 && gzip $DRESULTS".tar" \
1279 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1280 RETVAL=$?
1281 if test "x$RETVAL" != x0 ; then
1282 echo
1283 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1284 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1285 echo " summary of results from the directory \"$DRESULTS\"."
1286 echo
1287 else
1288 echo
1289 echo "An email containing results was sent to the following addresses:"
1290 echo " \"$ADDRESSES\""
1291 echo
1292 fi
1293 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1294 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1295 fi
1296 fi
1297
1298 rm -f tr_cmpnum.c tr_cmpnum
1299
1300 if test "x$CLEANUP" != xt ; then
1301 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'
1302 if test -e tr_out.txt ; then
1303 mv tr_out.txt tr_out.txt.old
1304 fi
1305 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt
1306 fi
1307
1308 if test "x$DELDIR" = xt ; then
1309 rm -rf $DRESULTS
1310 fi

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