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Revision 1.116 - (show annotations) (download)
Thu Jun 26 14:41:33 2008 UTC (15 years, 9 months ago) by mlosch
Branch: MAIN
CVS Tags: checkpoint61b, checkpoint61a
Changes since 1.115: +2 -2 lines
fix syntax of awk so that testreport works smoothly even in the sun

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.115 2008/04/06 19:19:47 jmc Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi threaded (using eedata.mth)"
15 echo " (-mpi) compile and run using MPI"
16 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
17 echo " (DEF=\"-ieee\")"
18 echo " (-gsl) compile with \"-gsl\" flag"
19 echo " (-of=|-optfile=)STRING list of optfiles to use"
20 echo " (-a|-addr) STRING list of email recipients"
21 echo " (DEF=\"\" no email is sent)"
22 echo " (-mpd|-mpackdir) DIR location of the mpack utility"
23 echo " (DEF=\"../tools/mpack-1.6\")"
24 echo " (-t|-tdir) STRING list of group and/or exp. dirs to test"
25 echo " (recognized groups: basic, tutorials)"
26 echo " (DEF=\"\" which test all)"
27 echo " (-skd|-skipdir) STRING list of exp. dirs to skip"
28 echo " (DEF=\"\" which test all)"
29 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
30 echo " Bourne-compatible \"sh\" shell"
31 echo " (DEF=\"\" for \"bash\")"
32 echo " (-adm|-ad) perform an adjoint run"
33 echo " (-command) STRING command to run"
34 echo " (DEF=\"make output.txt\")"
35 echo " (-m|-make) STRING command to use for \"make\""
36 echo " (DEF=\"make\")"
37 echo " (-odir) STRING used to build output directory name"
38 echo " (DEF=\"hostname\")"
39 echo " (-ptr|-ptracers) STRING specify which ptracers to test"
40 echo " (DEF=\"1 2 3 4 5\")"
41 echo " (-match) NUMBER Matching Criteria (number of digits)"
42 echo " (DEF=\"12\")"
43 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
44 echo " (-clean) *ONLY* run \"make CLEAN\""
45 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
46 echo " (-nogenmake|-ng) skip the genmake stage"
47 echo " (-noclean|-nc) skip the \"make clean\" stage"
48 echo " (-nodepend|-nd) skip the \"make depend\" stage"
49 echo " (-deldir|-dd) on success, delete the output directory"
50 echo " (-ts) provide timing information per timestep"
51 echo " (-papis) provide MFlop/s per timestep using PAPI"
52 echo " (-pcls) provide MFlop/s per timestep using PCL"
53 echo
54 echo "and where STRING can be a whitespace-delimited list"
55 echo "such as:"
56 echo
57 echo " -t 'exp0 exp2 exp3' "
58 echo " -addr='abc@123.com testing@home.org'"
59 echo
60 echo "provided that the expression is properly quoted within the current"
61 echo "shell (note the use of single quotes to protect white space)."
62 echo
63 exit 1
64 }
65
66 # build the mpack utility
67 build_mpack()
68 {
69 printf "building the mpack utility... "
70 MPACK="$MPACKDIR/mpack"
71 if test ! -x $MPACK ; then
72 if test ! -d $MPACKDIR ; then
73 echo
74 echo "Error: can't find \"$MPACKDIR\""
75 echo " are you sure this program is being run in the correct "
76 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
77 echo
78 HAVE_MPACK=f
79 fi
80 if test "x$CC" = x ; then
81 export CC=cc
82 fi
83 printf "building mpack (using CC=$CC)... "
84 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
85 RETVAL=$?
86 if test "x$RETVAL" != x0 ; then
87 echo
88 echo "Error building the mpack tools at: $MPACK_DIR"
89 echo
90 HAVE_MPACK=f
91 else
92 rm -f tr_build_mpack.out
93 HAVE_MPACK=t
94 echo "done"
95 fi
96 else
97 HAVE_MPACK=t
98 echo "already exist"
99 fi
100 }
101
102 testoutput_var()
103 {
104 # testoutput_var dir s1 label subdir reference_output
105 #
106 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
107 # with same output from reference file $dir/results/$reference_output
108 # using search strings s1 and text label
109
110 if [ $debug -gt 0 ]; then
111 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
112 fi
113 if [ -r $1/$4/$OUTPUTFILE ]; then
114 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
115 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
116 if [ $lncntA -lt 2 ]; then
117 if [ $verbose -gt 0 ]; then
118 echo Not enough lines of output when searching for "$2" 1>&2
119 fi
120 return 99
121 fi
122 else
123 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
124 return 99
125 fi
126 if [ $debug -gt 0 ]; then
127 echo testoutput_var: grep "$2" $1/results/$5 1>&2
128 fi
129 grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt
130 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
131 if [ $lncntB -lt 2 ]; then
132 if [ $verbose -gt 0 ]; then
133 echo Not enough lines of output when searching for "$2" 1>&2
134 fi
135 return 99
136 fi
137 if [ $lncntA -ne $lncntB ]; then
138 if [ $verbose -gt 0 ]; then
139 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
140 fi
141 return 99
142 fi
143 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
144 if [ $has_nan -gt 0 ] ; then
145 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
146 return 99
147 fi
148 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
149 if [ $has_inf -gt 0 ] ; then
150 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
151 return 99
152 fi
153 if [ $debug -gt 0 ]; then
154 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
155 fi
156 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
157 if [ $debug -gt 0 ]; then
158 echo testoutput_var: compare_lines 1>&2
159 fi
160 if [ $verbose -gt 1 ]; then
161 cat tmp3.txt 1>&2
162 fi
163 echo "-1" >> tmp3.txt
164 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
165 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
166 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
167 if [ $digits_of_similarity -eq 99 ]; then
168 if [ $verbose -gt 0 ]; then
169 echo testoutput_var: No comparison was available for \"$3\" 1>&2
170 fi
171 digits_of_similarity=99
172 else
173 if [ $verbose -gt 0 ]; then
174 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
175 fi
176 fi
177 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
178
179 return $digits_of_similarity
180 }
181
182 check_for_add_mon_output()
183 {
184 # Check for additional types of monitor output
185 if test "x$1" = x ; then
186 return
187 fi
188
189 for ii in $PTRACERS_NUM ; do
190 eval "HAVE_PTR0"$ii"=f"
191 done
192
193 ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max"
194 ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
195 for ii in $PTRACERS_NUM ; do
196 for jj in $ptr_add ; do
197 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
198 tst=`grep $name $1 | wc -l | awk '{print $1}'`
199 if test ! "x$tst" = x0 ; then
200 eval "HAVE_PTR0"$ii"=t"
201 fi
202 done
203 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"'
204 done
205 }
206
207 testoutput_run()
208 {
209 # testoutput_run directory subdir reference_output
210 #
211 # test output from 1 run in "directory"
212 # --> same processing for adjoint & forward test
213 # default list of output variables to be checked:
214 # 1rst : main variable used to decide if it pass or FAIL
215 # others : number of matching digits to be printed in summary.txt
216 listChk=$DEF_CHECK_LIST
217 # load experiment-specific list from file "tr_checklist" (if it exist)
218 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
219 sVar=`echo $listChk | awk '{print $1}'`
220 # remove 1rst var and expand the list: + => min max mean s.d
221 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
222 | sed 's/+//g' | sed "s/^$sVar//"`
223 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
224 for ii in 1 2 3 4 5 6 7 8 9 ; do
225 tst=`eval 'echo "$HAVE_PTR0'$ii'"'`
226 #echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
227 if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi
228 done
229 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'`
230 if test $tst != 1 ; then
231 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
232 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
233 echo "==> WARNING: in checked list:" $listVar 1>&2
234 #- put it back once:
235 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
236 fi
237 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
238 echo "listVar='$listVar'" > $CDIR"/summary.txt"
239 allargs=""
240 for xx in $listVar
241 do
242 case $xx in
243 'PS') if [ $debug -gt 0 ]
244 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
245 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$?
246 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
247 'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;;
248 'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;;
249 'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;;
250 'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;;
251 'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;;
252 'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;;
253 'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;;
254 'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;;
255 'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;;
256 'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;;
257 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;;
258 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;;
259 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;;
260 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;;
261 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;;
262 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;;
263 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;;
264 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;;
265 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
266 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;;
267 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
268 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;;
269 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
270 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;;
271 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
272 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;;
273 'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;;
274 'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;;
275 'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;;
276 'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;;
277 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;;
278 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;;
279 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;;
280 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;;
281 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;;
282 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;;
283 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;;
284 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;;
285 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;;
286 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;;
287 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;;
288 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;;
289 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;;
290 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;;
291 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
292 esac
293 if test $xx = $sVar
294 then allargs="$allargs > $yy <"
295 else allargs="$allargs $yy"
296 fi
297 done
298
299 nbVar=`echo $listVar | awk '{print NF}'`
300 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
301 #-- fill line (up to standard length) with dot:
302 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
303 echo $allargs $adNul
304 else
305 echo $allargs
306 fi
307 # <-- same processing for adjoint & forward test
308 }
309
310 genmakemodel()
311 {
312 # genmakemodel directory
313 if test "x$NOGENMAKE" = xt ; then
314 echo "genmake skipped!"
315 else
316 if test "x$BASH" = x ; then
317 GENMAKE2="../../../tools/genmake2"
318 else
319 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
320 fi
321 (
322 cd $1;
323 command="$GENMAKE2 -ds -m $MAKE"
324 if test "x$ADM" = x ; then
325 command="$command --mods=../code"
326 else
327 command="$command --mods=../code_ad"
328 fi
329 if test "x$OPTFILE" != xNONE ; then
330 command="$command --optfile=$OPTFILE"
331 fi
332 if test "x$IEEE" != x ; then
333 command="$command -ieee"
334 fi
335 if test "x$GSL" = xt ; then
336 command="$command -gsl"
337 fi
338 if test "x$MPI" = xt ; then
339 command="$command -mpi"
340 fi
341 if test "x$TS" = xt ; then
342 command="$command -ts"
343 fi
344 if test "x$PAPIS" = xt ; then
345 command="$command -papis"
346 else
347 if test "x$PCLS" = xt ; then
348 command="$command -pcls"
349 fi
350 fi
351 printf 'genmake ... ' 1>&2
352 $command > make.log 2>&1
353 RETVAL=$?
354 # Reduce the size of the testing emails!
355 head -100 Makefile > $CDIR/Makefile_head
356 if test "x$RETVAL" != x0 ; then
357 tail make.log
358 echo "genmakemodel: genmake failed" 1>&2
359 cp genmake_* make.log $CDIR
360 return 1
361 else
362 echo "successful" 1>&2
363 fi
364 )
365 fi
366 }
367
368 makeclean()
369 {
370 # makeclean directory
371 if test "x$NOCLEAN" = xt ; then
372 echo "make Clean skipped!"
373 else
374 (
375 cd $1;
376 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
377 if test -r Makefile ; then
378 printf 'clean build-dir: make Clean ... ' 2>&1
379 $MAKE Clean >> make.log 2>&1
380 RETVAL=$?
381 if test "x$RETVAL" != x0 ; then
382 tail make.log
383 echo "makeclean: \"make Clean\" failed" 1>&2
384 cp make.log $CDIR"/make.log"
385 return 1
386 fi
387 fi
388 echo successful 1>&2
389 exit 0
390 )
391 fi
392 }
393
394 run_clean()
395 {
396 # run_clean directory
397 if test "x$NOCLEAN" = xt ; then
398 echo "run_clean skipped!"
399 else
400 (
401 cd $1;
402 printf 'clean run-dir ... ' 2>&1
403 # part of what is done after "make clean" when doing "make CLEAN"
404 find . -name "*.meta" -exec rm {} \;
405 find . -name "*.data" -exec rm {} \;
406 find . -name "fort.*" -exec rm {} \;
407 find . -type l -exec rm {} \;
408 rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime
409 rm -rf mnc_test_*
410 rm -f *_MIT_CE_000.opt0000 costfunction*0000
411 echo successful 1>&2
412 exit 0
413 )
414 fi
415 }
416
417 makedependmodel()
418 {
419 # makedependmodel directory
420 if test "x$NODEPEND" = xt ; then
421 echo "make depend skipped!"
422 else
423 (
424 cd $1;
425 printf 'make depend ... ' 1>&2
426 $MAKE depend >> make.log 2>&1
427 RETVAL=$?
428 if test "x$RETVAL" != x0 ; then
429 tail make.log
430 echo "makedependmodel: make depend failed" 1>&2
431 cp make.log $CDIR"/make.log"
432 return 1
433 else
434 echo successful 1>&2
435 fi
436 )
437 fi
438 }
439
440 makemodel()
441 {
442 # makemodel directory
443 (
444 cd $1;
445 if test -r Makefile ; then
446 printf 'make ... ' 1>&2
447 if test "x$ADM" = x ; then
448 if test "x$JOBS" = x ; then
449 $MAKE >> make.log 2>&1
450 else
451 $MAKE -j $JOBS >> make.log 2>&1
452 fi
453 else
454 $MAKE adall >> make.log 2>&1
455 fi
456 RETVAL=$?
457 if test "x$RETVAL" != x0 ; then
458 tail make.log
459 echo failed 1>&2
460 cp make.log $CDIR"/make.log"
461 return 1
462 else
463 echo successful 1>&2
464 fi
465 fi
466 )
467 }
468
469 symlink_mpifiles()
470 {
471 # Put special links so that MPI specific files are used
472 # This MUST be invoked between makeclean and makelinks because
473 # the Makefile will link to non-mpi files by default
474
475 dir=$1
476 code_dir=$2
477 BUILD_DIR=$dir/$3
478 CODE_DIR=$dir/$code_dir
479
480 # These are files that should replace their counter-part when using -mpi
481 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi" -print)`
482
483 # Is this an MPI run?
484 if test "x$MPI" = xt ; then
485 # YES: We symbolically link these files to the build
486 # dir so long as there is no real file in place
487 for ii in $MPI_FILES ; do
488 i=`echo $ii | sed 's:^\./::'`
489 name=`echo $i | sed 's:_mpi::' `
490 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
491 RETVAL=$?
492 if test "x$RETVAL" != x0 ; then
493 if ! test -f $BUILD_DIR/$i ; then
494 #echo Linking $name to $i
495 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
496 fi
497 fi
498 done
499 else
500 # NO: We undo any _mpi symbolically linked files
501 for ii in $MPI_FILES ; do
502 i=`echo $ii | sed 's:^\./::'`
503 name=`echo $i | sed 's:_mpi::' `
504 if test -L $BUILD_DIR/$name ; then
505 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
506 RETVAL=$?
507 if test "x$RETVAL" = x0 ; then
508 #echo Un-linking $name from $linktarg
509 rm -f $BUILD_DIR/$name
510 fi
511 fi
512 done
513 fi
514
515 }
516
517 linkdata()
518 {
519 # linkdata run_dir input_dir_1 input_dir_2 ...
520 #
521 # symbolically link data files to run directory
522 if test -d $1 ; then
523 (
524 cd $1 ; shift
525 if test -r "../"$1"/eedata.mth" ; then
526 # found eedata.mth in 1rst input dir and it is readable
527 if test "x$MULTI_THREAD" = "xt" ; then
528 # multi-threaded test: remove symbolic link & link eedata.mth
529 if test -h eedata ; then rm -f eedata ; fi
530 if test ! -r eedata ; then
531 ln -sf "../"$1"/eedata.mth" eedata ;
532 printf 'eedata.mth ' 1>&2
533 fi
534 else
535 # not multi-threaded test: remove eedata symbolic link
536 if test -h eedata ; then rm -f eedata ; fi
537 fi
538 fi
539 prevDir='NONE'
540 for ldir in $* ; do
541 if test -d "../"$ldir -a $ldir != $prevDir ; then
542 printf 'ldir='${ldir} 1>&2
543 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
544 for i in $files ; do
545 if test ! -d "../"$ldir/$i ; then
546 if test ! -r $i ; then
547 printf ' '$i 1>&2
548 ln -sf "../"$ldir"/"$i $i
549 fi
550 fi
551 done
552 if test -x "../"$ldir"/"prepare_run ; then
553 "../"$ldir"/"prepare_run
554 fi
555 printf ' ; ' 1>&2
556 fi
557 prevDir=$ldir
558 done
559 )
560 fi
561 }
562
563 runmodel()
564 {
565 # runmodel directory
566 #
567 # runs "$COMMAND in "directory"
568 # (where "$COMMAND" is relative to "directory")
569 (
570 cd $1
571 printf 'runmodel in %s ...' $1 1>&2
572 # make output.txt
573 echo
574 if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
575 diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1
576 outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; rm -f run.log ; fi
577 fi
578 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
579 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00
580 ln -sf "../"$builddir"/"$EXECUTABLE .
581 fi
582 if test ! -x $EXECUTABLE ; then
583 rm -f run.log ; touch run.log
584 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
585 echo " no executable:" $EXECUTABLE >> run.log
586 RETVAL=8
587 ENDVAL=-1
588 else
589 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
590 # output do not exist or is older than executable:
591 rm -f run.log ; touch run.log
592 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
593 ( eval $COMMAND ) >> run.log 2>&1
594 RETVAL=$?
595 else
596 RETVAL=0
597 if test -f run.log ; then
598 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
599 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
600 else
601 touch run.log
602 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
603 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
604 echo " no previous run.log: assume NORMAL END" >> run.log 2>&1
605 fi
606 fi
607 ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'`
608 fi
609 rm -f run.log_00
610 #if test "x$RETVAL" = x0 ; then
611 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
612 tail run.log
613 echo successful 1>&2
614 # === Reduce the size of the testing emails!
615 #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE
616 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
617 return 0
618 else
619 tail run.log
620 echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2
621 cp run.log $CDIR"/run.log"
622 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
623 return 1
624 fi
625 )
626 }
627
628 createcodelet()
629 {
630 # create codelet for comparing model output
631
632 printf "creating the comparison code (using CC=$CC)... "
633 cat > tr_cmpnum.c <<EOF
634 #include <stdio.h>
635 #include <math.h>
636 int main( int argc, char** argv ) {
637 int linnum,cmplin,best,lncnt;
638 double a,b,abave,relerr;
639 best = -22;
640 lncnt = 0;
641 while( 1 & ( (lncnt+=1) < 999 ) ) {
642 scanf("%d", &linnum);
643 if (linnum == -1) break;
644 scanf("%lf", &a); scanf("%lf", &b);
645 abave = 0.5*(fabs(a)+fabs(b));
646 if ( abave == abave ) {
647 if (abave > 0.0) {
648 relerr=fabs(a-b)/abave;
649 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
650 else { cmplin = -16 ; }
651 best = (best > cmplin) ? best : cmplin; }
652 else { cmplin = -22 ; }
653 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
654 }
655 else {
656 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
657 break; }
658 }
659 if (lncnt == 999) best=-29;
660 if (linnum != -1) best=-99;
661 printf("%d\n", -best);
662 return 0;
663 }
664 EOF
665 $CC -o tr_cmpnum tr_cmpnum.c -lm
666
667 if [ -x ./tr_cmpnum ]; then
668 echo "OK"
669 return 0
670 else
671 echo
672 echo "ERROR: failed to compile comparison code -- please specify"
673 echo " a C compiler using the CC environment variable."
674 exit 1
675 fi
676 }
677
678 formatresults()
679 {
680 # formatresults expt genmake depend make run results*
681
682 nm=$1
683 printf '%s %s %s %s' $2 $3 $4 $5
684 shift; shift; shift; shift; shift;
685 listPrt=$@
686 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
687 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
688 printf '%3s' $listPrt
689 # line below does not work on hp-ux_ia64 : do those substitutions later on
690 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
691
692 if [ $xx = '..' ]; then
693 printf ' N/O '
694 elif [ $xx = '--' ]; then
695 printf ' N/O '
696 elif [ $xx = 99 ]; then
697 printf ' N/O '
698 else
699 if [ $xx -ge $MATCH_CRIT ]; then
700 printf ' pass'
701 else
702 printf ' FAIL'
703 fi
704 fi
705 printf ' %s' $nm
706 printf '\n'
707
708 }
709
710 scandirs()
711 {
712 if [ $# -eq 1 ]; then
713 for arg in * ; do
714 test -f $arg/$1 && echo $arg
715 done
716 else
717 echo $*
718 fi
719 }
720
721
722 ###############################################################################
723
724
725 # Default properties
726 debug=0
727 verbose=1
728 clean=0
729
730 IEEE=true
731 if test "x$MITGCM_IEEE" != x ; then
732 IEEE=$MITGCM_IEEE
733 fi
734 GSL=f
735
736 CLEANUP=f
737 QUICK=f
738 NOGENMAKE=f
739 NOCLEAN=f
740 NODEPEND=f
741 POSTCLEAN=f
742
743 BASH=
744 OPTFILE=NONE
745 ADDRESSES=
746 TESTDIRS=
747 SKIPDIRS=
748 MPACKDIR="../tools/mpack-1.6"
749 HAVE_MPACK=
750 MPACK=
751 COMMAND=
752 if test "x$MAKE" = x ; then
753 MAKE=make
754 fi
755 if test "x$CC" = x ; then
756 CC=cc
757 fi
758 JOBS=
759 MPI=f
760 MULTI_THREAD=f
761 OUTDIR=
762 DELDIR=
763
764 ADM=
765
766 # Additional monitor types
767 PTRACERS_NUM="1 2 3 4 5"
768
769 MATCH_CRIT=13
770
771 printf "parsing options... "
772
773 ac_prev=
774 for ac_option ; do
775
776 # If the previous option needs an argument, assign it.
777 if test -n "$ac_prev"; then
778 eval "$ac_prev=\$ac_option"
779 ac_prev=
780 continue
781 fi
782
783 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
784
785 case $ac_option in
786
787 -help | --help | -h | --h)
788 usage ;;
789
790 -optfile | --optfile | -of | --of)
791 ac_prev=OPTFILE ;;
792 -optfile=* | --optfile=* | -of=* | --of=*)
793 OPTFILE=$ac_optarg ;;
794
795 -addr | --addr | -a | --a)
796 ac_prev=ADDRESSES ;;
797 -addr=* | --addr=*)
798 ADDRESSES=$ac_optarg ;;
799 -mpackdir | --mpackdir | -mpd | --mpd)
800 ac_prev=MPACKDIR ;;
801 -mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*)
802 MPACKDIR=$ac_optarg ;;
803
804 -tdir | --tdir | -t | --t)
805 ac_prev=TESTDIRS ;;
806 -tdir=* | --tdir=*)
807 TESTDIRS=$ac_optarg ;;
808
809 -skipdir | --skipdir | -skd | --skd)
810 ac_prev=SKIPDIRS ;;
811 -skipdir=* | --skipdir=*)
812 SKIPDIRS=$ac_optarg ;;
813
814 -bash | --bash | -b | --b)
815 ac_prev=BASH ;;
816 -bash=* | --bash=*)
817 BASH=$ac_optarg ;;
818
819 -command | --command | -c | --c)
820 ac_prev=COMMAND ;;
821 -command=* | --command=*)
822 COMMAND=$ac_optarg ;;
823
824 -make | --make | -m | --m)
825 ac_prev=MAKE ;;
826 -make=* | --make=*)
827 MAKE=$ac_optarg ;;
828
829 -odir | --odir)
830 ac_prev=OUTDIR ;;
831 -odir=* | --odir=*)
832 OUTDIR=$ac_optarg ;;
833
834 -ptracers | --ptracers | -ptr | --ptr)
835 ac_prev=PTRACERS_NUM ;;
836 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
837 PTRACERS_NUM=$ac_optarg ;;
838
839 -match | --match ) ac_prev=MATCH_CRIT ;;
840 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
841
842 -j) ac_prev=JOBS ;;
843 -j=*) JOBS=$ac_optarg ;;
844
845 -clean | --clean)
846 CLEANUP=t ; DELDIR=t ;;
847
848 -quick | --quick | -q | --q)
849 QUICK=t ;;
850 -nogenmake | --nogenmake | -ng | --ng)
851 NOGENMAKE=t ;;
852 -noclean | --noclean | -nc | --nc)
853 NOCLEAN=t ;;
854 -nodepend | --nodepend | -nd | --nd)
855 NODEPEND=t ;;
856
857 -postclean | --postclean | -pc | --pc)
858 POSTCLEAN=t ;;
859
860 -mpi) MPI=t ;;
861
862 -mth) MULTI_THREAD=t ;;
863
864 -adm | -ad) ADM=t ;;
865
866 -ieee) IEEE=true ;;
867 -noieee) IEEE= ;;
868 -gsl) GSL=t ;;
869
870 -verbose) verbose=2 ;;
871 -debug) debug=1 ;;
872 -quiet) verbose=0 ;;
873
874 -deldir | -dd) DELDIR=t ;;
875
876 -ts) TS=t;;
877
878 -papis) PAPIS=t;;
879
880 -pcls) PCL=t;;
881
882 -*)
883 echo "Error: unrecognized option: "$ac_option
884 usage
885 ;;
886
887 *)
888 echo "Error: unrecognized argument: "$ac_option
889 usage
890 ;;
891
892 esac
893
894 done
895
896 if test "x$QUICK" = xt ; then
897 NOGENMAKE=t
898 NOCLEAN=t
899 NODEPEND=t
900 fi
901
902 #- setting for forward or ADM testing
903 if test "x$ADM" = xt ; then
904 code_dir=code_ad
905 inputdir=input_ad
906 ref_outp="output_adm.txt"
907 EXECUTABLE="mitgcmuv_ad"
908 else
909 code_dir=code
910 inputdir=input
911 ref_outp="output.txt"
912 EXECUTABLE="mitgcmuv"
913 fi
914
915 if test "x$TESTDIRS" = x ; then
916 LIST=`scandirs results/$ref_outp`
917 else
918 #- expand group of experiments:
919 LIST=" "
920 for xx in $TESTDIRS
921 do
922 case $xx in
923 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
924 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
925 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
926 ;;
927 'tutorials')
928 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
929 *) LIST=${LIST}" "$xx ;;
930 esac
931 done
932 fi
933 #echo 'LIST='${LIST}'<'
934 #- skip dirs, remove duplicate and non-directory:
935 TESTDIRS=" "
936 count=0
937 for xx in $LIST
938 do
939 yy=`echo $SKIPDIRS | grep -c $xx`
940 if test $yy = 0 ; then
941 if test -d $xx ; then
942 yy=`echo $TESTDIRS | grep -c $xx`
943 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
944 else count=1 ;
945 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
946 fi
947 else
948 if test $count = 1 ; then echo -n ", \"$xx\""
949 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
950 fi
951 fi
952 done
953 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
954 #echo 'TESTDIRS='${TESTDIRS}'<'
955
956 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
957 OPTFILE=$MITGCM_OF
958 fi
959
960 OUTPUTFILE=$ref_outp
961 if test "x$COMMAND" = x ; then
962 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
963 fi
964 if test "x$MPI" = xt ; then
965 OUTPUTFILE="STDOUT.0000"
966 fi
967
968 echo "OK (COMMAND= $COMMAND )"
969
970 # set the Default List of output variables to be checked:
971 # (use default or load experiment-specific list from file "tr_checklist")
972 # content : 1rst = main variable used to decide if it pass or FAIL
973 # others = number of matching digits to be printed in summary.txt
974 if test "x$ADM" = x ; then
975 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
976 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
977 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
978 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
979 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
980 else
981 DEF_CHECK_LIST='Grad Cost Grad'
982 EMPTY_RESULTS='.. ..'
983 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
984 fi
985
986 # create the FORTRAN comparison code
987 createcodelet
988
989 # build the mpack utility (if ADDRESSES = NONE, do it to test the build)
990 if test "x$ADDRESSES" = x ; then
991 echo "skipping mpack build"
992 else
993 build_mpack
994 fi
995
996 # Create a uniquely named directory to store results
997 CMDLINE=$0
998 for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done
999 MACH=`hostname`
1000 UNAMEA=`uname -a`
1001 DATE=`date +%Y%m%d`
1002 BASE="tr_"$MACH"_"$DATE"_"
1003 if test "x$OUTDIR" != x ; then
1004 BASE="tr_"$OUTDIR"_"$DATE"_"
1005 fi
1006 DNUM=0
1007 DRESULTS="$BASE$DNUM"
1008 while test -e $DRESULTS ; do
1009 DNUM=$(( $DNUM + 1 ))
1010 DRESULTS="$BASE$DNUM"
1011 done
1012 mkdir $DRESULTS
1013 RETVAL=$?
1014 if test "x$RETVAL" != x0 ; then
1015 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1016 exit 1
1017 fi
1018 SUMMARY="$DRESULTS/summary.txt"
1019 start_date=`date`
1020 echo $start_date > $SUMMARY
1021 echo 'run:' $CMDLINE >> $SUMMARY
1022 echo 'on :' $UNAMEA >> $SUMMARY
1023
1024 of_path=
1025 if test "x$OPTFILE" != xNONE ; then
1026 if test -r $OPTFILE ; then
1027 # get the path
1028 path=${OPTFILE%/*}
1029 if test "x$path" = x ; then
1030 of_path=`pwd`
1031 else
1032 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1033 fi
1034 file=${OPTFILE##*/}
1035 OPTFILE=$of_path/$file
1036 cp $OPTFILE $DRESULTS
1037 echo >> $SUMMARY
1038 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1039 else
1040 echo | tee $SUMMARY
1041 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1042 exit 1
1043 fi
1044 else
1045 echo >> $SUMMARY
1046 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
1047 echo " so the genmake default will be used." >> $SUMMARY
1048 fi
1049 echo
1050 echo >> $SUMMARY
1051 if test "x$ADM" = x ; then
1052 if [ $MATCH_CRIT -lt 10 ] ;
1053 then line_0="default "$MATCH_CRIT ;
1054 else line_0="default "$MATCH_CRIT ; fi
1055 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1056 # line_0=" ----T----- ----S----- ----U----- ----V-----"
1057 line_1="G D M c m s m s m s m s"
1058 line_2="E p a R g m m e . m m e . m m e . m m e ."
1059 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
1060 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1061 for ii in $PTRACERS_NUM ; do
1062 # tst=`eval 'echo $HAVE_PTR0'$ii`
1063 # if test "x$tst" = xt ; then
1064 line_0="$line_0 --PTR 0"$ii"--"
1065 line_1="$line_1 m s"
1066 line_2="$line_2 m m e ."
1067 line_3="$line_3 i a a d"
1068 line_4="$line_4 n x n ."
1069 # fi
1070 done
1071 echo "$line_0" | tee -a $SUMMARY
1072 echo "$line_1" | tee -a $SUMMARY
1073 echo "$line_2" | tee -a $SUMMARY
1074 echo "$line_3" | tee -a $SUMMARY
1075 echo "$line_4" | tee -a $SUMMARY
1076 echo " " | tee -a $SUMMARY
1077 else
1078 echo "ADJOINT=true" >> $SUMMARY
1079 echo >> $SUMMARY
1080 if [ $MATCH_CRIT -lt 10 ] ;
1081 then line_0="default "$MATCH_CRIT ;
1082 else line_0="default "$MATCH_CRIT ; fi
1083 echo "$line_0" | tee -a $SUMMARY
1084 cat << EOF | tee -a $SUMMARY
1085 G D M C G
1086 E p a R o r
1087 N n k u s a
1088 2 d e n t d
1089
1090 EOF
1091 fi
1092
1093 # ...and each test directory...
1094 for dir in $TESTDIRS ; do
1095
1096 # set builddir & rundir:
1097 builddir="build"
1098 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1099 rundir="run"
1100 if test ! -d $dir/$rundir ; then
1101 rundir=$builddir
1102 fi
1103 CODE_DIR=$dir/$code_dir
1104 BUILD_DIR=$dir/$builddir
1105
1106 # Cleanup only!
1107 if test "x$CLEANUP" = xt ; then
1108 if test -r $BUILD_DIR/Makefile ; then
1109 echo ' ------ clean dir:' $dir/$builddir
1110 ( cd $BUILD_DIR ; make CLEAN )
1111 fi
1112 if test -d $dir/$rundir/CVS ; then
1113 echo ' ------ clean dir:' $dir/$rundir
1114 run_clean $dir/$rundir
1115 fi
1116 (
1117 cd $dir
1118 rm -rf tr_run.*
1119 )
1120 continue
1121 fi
1122
1123 # Verify that the testdir exists and contains previous
1124 # results in the correct location--or skip this directory!
1125 fout=$dir"/results/"$ref_outp
1126 if test ! -r $fout ; then
1127 echo "can't read \"$fout\" -- skipping $dir"
1128 continue
1129 fi
1130 if test "x$ADM" = x ; then
1131 check_for_add_mon_output $fout
1132 fi
1133
1134 # Check for additional types of monitor output
1135
1136 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
1137 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1138 continue
1139 fi
1140 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1141 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1142 continue
1143 fi
1144
1145 # Check whether there are "extra runs" for this testdir
1146 extra_runs=
1147 ex_run_dirs=`( cd $dir ; echo $inputdir.* )`
1148 #echo "ex_run_dirs='$ex_run_dirs'"
1149 for exd in $ex_run_dirs ; do
1150 name=`echo $exd | sed -e "s/$inputdir\.//"`
1151 refExOut=`echo $ref_outp | sed "s/\./.${name}./"`
1152 outf="$dir/results/$refExOut"
1153 if test -f $outf -a -r $outf ; then
1154 if test "x$MULTI_THREAD" = "xt" ; then
1155 if test -r $dir"/"$exd"/eedata.mth" ; then
1156 extra_runs="$extra_runs $name"
1157 #else echo $dir"/"$exd"/eedata.mth: not found"
1158 fi
1159 else
1160 extra_runs="$extra_runs $name"
1161 fi
1162 fi
1163 done
1164
1165 echo "-------------------------------------------------------------------------------"
1166 echo
1167 if test "x$extra_runs" = "x" ; then
1168 echo "Experiment: $dir"
1169 else
1170 echo "Experiment: $dir ; extra_runs=$extra_runs"
1171 fi
1172 echo
1173 unset genmake makedepend make run
1174 results=$EMPTY_RESULTS
1175
1176 # Create an output dir for each OPTFILE/tdir combination
1177 rel_CDIR=$DRESULTS"/"$dir
1178 mkdir $rel_CDIR
1179 CDIR=`pwd`"/$rel_CDIR"
1180
1181 if test "x$CLEANUP" = xt ; then
1182 echo '====>>> this is to check that we never go through this part <<< ==='
1183 makeclean $dir/$builddir \
1184 && run_clean $dir/$rundir
1185 else
1186 genmakemodel $dir/$builddir && genmake=Y \
1187 && makeclean $dir/$builddir \
1188 && run_clean $dir/$rundir \
1189 && symlink_mpifiles $dir $code_dir $builddir \
1190 && makedependmodel $dir/$builddir && makedepend=Y \
1191 && makemodel $dir/$builddir && make=Y \
1192 && linkdata $dir/$rundir $inputdir input \
1193 && runmodel $dir/$rundir && run=Y \
1194 && results=`testoutput_run $dir $rundir $ref_outp`
1195 fi
1196
1197 echo
1198 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1199 echo
1200 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1201 touch $CDIR"/summary.txt"
1202 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1203 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1204 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1205 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1206 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1207 if test "x$ADM" = xt ; then
1208 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1209 grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \
1210 >> $CDIR"/summary.txt"
1211 fi
1212
1213 for ex in $extra_runs ; do
1214 unset run
1215 results=$EMPTY_RESULTS
1216 # reference output file
1217 refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"`
1218 # Create an output dir for each OPTFILE/tdir.ex combination
1219 rel_CDIR=$DRESULTS"/"$dir"."$ex
1220 mkdir $rel_CDIR
1221 CDIR=`pwd`"/$rel_CDIR"
1222 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
1223 run_clean $dir/tr_run.$ex
1224 linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input
1225 runmodel $dir/tr_run.$ex && run=Y \
1226 && results=`testoutput_run $dir tr_run.$ex $refExOut`
1227 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1228 fres="$fres.$ex"
1229 echo
1230 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1231 touch $CDIR"/summary.txt"
1232 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1233 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1234 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1235 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1236 echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt"
1237 if test "x$ADM" = xt ; then
1238 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1239 grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \
1240 >> $CDIR"/summary.txt"
1241 fi
1242 if test "x$POSTCLEAN" = xt ; then
1243 run_clean $dir/tr_run.$ex
1244 fi
1245 done
1246
1247 #postclean $dir/$builddir
1248 if test "x$POSTCLEAN" = xt ; then
1249 makeclean $dir/$builddir \
1250 && run_clean $dir/$rundir
1251 fi
1252
1253 echo "-------------------------------------------------------------------------------"
1254
1255 done
1256
1257 printf "Start time: " >> $SUMMARY
1258 echo "$start_date" >> $SUMMARY
1259 printf "End time: " >> $SUMMARY
1260 date >> $SUMMARY
1261
1262 # If addresses were supplied and mpack built successfully, then try
1263 # to send email using mpack.
1264 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1265 echo "No results email was sent."
1266 else
1267 if test "x$HAVE_MPACK" = xt ; then
1268 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1269 && gzip $DRESULTS".tar" \
1270 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1271 RETVAL=$?
1272 if test "x$RETVAL" != x0 ; then
1273 echo
1274 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1275 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1276 echo " summary of results from the directory \"$DRESULTS\"."
1277 echo
1278 else
1279 echo
1280 echo "An email containing results was sent to the following addresses:"
1281 echo " \"$ADDRESSES\""
1282 echo
1283 fi
1284 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1285 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1286 fi
1287 fi
1288
1289 rm -f tr_cmpnum.c tr_cmpnum
1290
1291 if test "x$CLEANUP" != xt ; then
1292 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'
1293 if test -e tr_out.txt ; then
1294 mv tr_out.txt tr_out.txt.old
1295 fi
1296 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt
1297 fi
1298
1299 if test "x$DELDIR" = xt ; then
1300 rm -rf $DRESULTS
1301 fi

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