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Revision 1.112 - (show annotations) (download)
Sat Feb 9 18:30:25 2008 UTC (12 years, 1 month ago) by jmc
Branch: MAIN
CVS Tags: checkpoint59o
Changes since 1.111: +7 -6 lines
minor changes: print which C compiler is used to build mpack and to
 compile the comparison code.

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.111 2008/02/06 21:06:03 mlosch Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi threaded (using eedata.mth)"
15 echo " (-mpi) compile and run using MPI"
16 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
17 echo " (DEF=\"-ieee\")"
18 echo " (-gsl) compile with \"-gsl\" flag"
19 echo " (-of=|-optfile=)STRING list of optfiles to use"
20 echo " (-a|-addr) STRING list of email recipients"
21 echo " (DEF=\"\" no email is sent)"
22 echo " (-t|-tdir) STRING list of group and/or exp. dirs to test"
23 echo " (recognized groups: basic, tutorials)"
24 echo " (DEF=\"\" which test all)"
25 echo " (-skd|-skipdir) STRING list of exp. dirs to skip"
26 echo " (DEF=\"\" which test all)"
27 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
28 echo " Bourne-compatible \"sh\" shell"
29 echo " (DEF=\"\" for \"bash\")"
30 echo " (-adm|-ad) perform an adjoint run"
31 echo " (-command) STRING command to run"
32 echo " (DEF=\"make output.txt\")"
33 echo " (-m|-make) STRING command to use for \"make\""
34 echo " (DEF=\"make\")"
35 echo " (-odir) STRING used to build output directory name"
36 echo " (DEF=\"hostname\")"
37 echo " (-ptr|-ptracers) STRING specify which ptracers to test"
38 echo " (DEF=\"1 2 3 4 5\")"
39 echo " (-match) NUMBER Matching Criteria (number of digits)"
40 echo " (DEF=\"12\")"
41 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
42 echo " (-clean) *ONLY* run \"make CLEAN\""
43 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
44 echo " (-nogenmake|-ng) skip the genmake stage"
45 echo " (-noclean|-nc) skip the \"make clean\" stage"
46 echo " (-nodepend|-nd) skip the \"make depend\" stage"
47 echo " (-deldir|-dd) on success, delete the output directory"
48 echo " (-ts) provide timing information per timestep"
49 echo " (-papis) provide MFlop/s per timestep using PAPI"
50 echo " (-pcls) provide MFlop/s per timestep using PCL"
51 echo
52 echo "and where STRING can be a whitespace-delimited list"
53 echo "such as:"
54 echo
55 echo " -t 'exp0 exp2 exp3' "
56 echo " -addr='abc@123.com testing@home.org'"
57 echo
58 echo "provided that the expression is properly quoted within the current"
59 echo "shell (note the use of single quotes to protect white space)."
60 echo
61 exit 1
62 }
63
64 # build the mpack utility
65 build_mpack()
66 {
67 printf "building the mpack utility... "
68 if test ! -x "$MPACKDIR/mpack" ; then
69 if test ! -d $MPACKDIR ; then
70 echo
71 echo "Error: can't find \"$MPACKDIR\""
72 echo " are you sure this program is being run in the correct "
73 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
74 echo
75 HAVE_MPACK=f
76 fi
77 if test "x$CC" = x ; then
78 export CC=cc
79 fi
80 printf "building mpack (using CC=$CC)... "
81 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
82 RETVAL=$?
83 if test "x$RETVAL" != x0 ; then
84 echo
85 echo "Error building the mpack tools at: $MPACK_DIR"
86 echo
87 HAVE_MPACK=f
88 else
89 rm -f tr_build_mpack.out
90 HAVE_MPACK=t
91 echo "OK"
92 fi
93 else
94 HAVE_MPACK=t
95 echo "done"
96 fi
97 }
98
99 testoutput_var()
100 {
101 # testoutput_var dir s1 label subdir reference_output
102 #
103 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
104 # with same output from reference file $dir/results/$reference_output
105 # using search strings s1 and text label
106
107 if [ $debug -gt 0 ]; then
108 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
109 fi
110 if [ -r $1/$4/$OUTPUTFILE ]; then
111 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
112 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
113 if [ $lncntA -lt 2 ]; then
114 if [ $verbose -gt 0 ]; then
115 echo Not enough lines of output when searching for "$2" 1>&2
116 fi
117 return 99
118 fi
119 else
120 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
121 return 99
122 fi
123 if [ $debug -gt 0 ]; then
124 echo testoutput_var: grep "$2" $1/results/$5 1>&2
125 fi
126 grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt
127 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
128 if [ $lncntB -lt 2 ]; then
129 if [ $verbose -gt 0 ]; then
130 echo Not enough lines of output when searching for "$2" 1>&2
131 fi
132 return 99
133 fi
134 if [ $lncntA -ne $lncntB ]; then
135 if [ $verbose -gt 0 ]; then
136 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
137 fi
138 return 99
139 fi
140 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
141 if [ $has_nan -gt 0 ] ; then
142 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
143 return 99
144 fi
145 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
146 if [ $has_inf -gt 0 ] ; then
147 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
148 return 99
149 fi
150 if [ $debug -gt 0 ]; then
151 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
152 fi
153 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
154 if [ $debug -gt 0 ]; then
155 echo testoutput_var: compare_lines 1>&2
156 fi
157 if [ $verbose -gt 1 ]; then
158 cat tmp3.txt 1>&2
159 fi
160 echo "-1" >> tmp3.txt
161 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
162 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
163 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
164 if [ $digits_of_similarity -eq 99 ]; then
165 if [ $verbose -gt 0 ]; then
166 echo testoutput_var: No comparison was available for \"$3\" 1>&2
167 fi
168 digits_of_similarity=99
169 else
170 if [ $verbose -gt 0 ]; then
171 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
172 fi
173 fi
174 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
175
176 return $digits_of_similarity
177 }
178
179 check_for_add_mon_output()
180 {
181 # Check for additional types of monitor output
182 if test "x$1" = x ; then
183 return
184 fi
185
186 for ii in $PTRACERS_NUM ; do
187 eval "HAVE_PTR0"$ii"=f"
188 done
189
190 ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max"
191 ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
192 for ii in $PTRACERS_NUM ; do
193 for jj in $ptr_add ; do
194 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
195 tst=`grep $name $1 | wc -l | awk '{print $1}'`
196 if test ! "x$tst" = x0 ; then
197 eval "HAVE_PTR0"$ii"=t"
198 fi
199 done
200 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"'
201 done
202 }
203
204 testoutput_run()
205 {
206 # testoutput_run directory subdir reference_output
207 #
208 # test output from 1 run in "directory"
209 # --> same processing for adjoint & forward test
210 # default list of output variables to be checked:
211 # 1rst : main variable used to decide if it pass or FAIL
212 # others : number of matching digits to be printed in summary.txt
213 listChk=$DEF_CHECK_LIST
214 # load experiment-specific list from file "tr_checklist" (if it exist)
215 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
216 sVar=`echo $listChk | awk '{print $1}'`
217 # remove 1rst var and expand the list: + => min max mean s.d
218 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
219 | sed 's/+//g' | sed "s/^$sVar//"`
220 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
221 for ii in 1 2 3 4 5 6 7 8 9 ; do
222 tst=`eval 'echo "$HAVE_PTR0'$ii'"'`
223 #echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
224 if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi
225 done
226 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'`
227 if test $tst != 1 ; then
228 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
229 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
230 echo "==> WARNING: in checked list:" $listVar 1>&2
231 #- put it back once:
232 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
233 fi
234 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
235 echo "listVar='$listVar'" > $CDIR"/summary.txt"
236 allargs=""
237 for xx in $listVar
238 do
239 case $xx in
240 'PS') if [ $debug -gt 0 ]
241 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
242 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$?
243 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
244 'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;;
245 'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;;
246 'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;;
247 'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;;
248 'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;;
249 'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;;
250 'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;;
251 'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;;
252 'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;;
253 'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;;
254 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;;
255 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;;
256 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;;
257 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;;
258 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;;
259 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;;
260 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;;
261 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;;
262 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
263 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;;
264 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
265 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;;
266 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
267 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;;
268 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
269 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;;
270 'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;;
271 'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;;
272 'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;;
273 'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;;
274 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;;
275 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;;
276 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;;
277 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;;
278 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;;
279 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;;
280 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;;
281 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;;
282 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;;
283 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;;
284 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;;
285 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;;
286 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;;
287 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;;
288 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
289 esac
290 if test $xx = $sVar
291 then allargs="$allargs > $yy <"
292 else allargs="$allargs $yy"
293 fi
294 done
295
296 nbVar=`echo $listVar | awk '{print NF}'`
297 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
298 #-- fill line (up to standard length) with dot:
299 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
300 echo $allargs $adNul
301 else
302 echo $allargs
303 fi
304 # <-- same processing for adjoint & forward test
305 }
306
307 genmakemodel()
308 {
309 # genmakemodel directory
310 if test "x$NOGENMAKE" = xt ; then
311 echo "genmake skipped!"
312 else
313 if test "x$BASH" = x ; then
314 GENMAKE2="../../../tools/genmake2"
315 else
316 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
317 fi
318 (
319 cd $1;
320 command="$GENMAKE2 -ds -m $MAKE"
321 if test "x$ADM" = x ; then
322 command="$command --mods=../code"
323 else
324 command="$command --mods=../code_ad"
325 fi
326 if test "x$OPTFILE" != xNONE ; then
327 command="$command --optfile=$OPTFILE"
328 fi
329 if test "x$IEEE" != x ; then
330 command="$command -ieee"
331 fi
332 if test "x$GSL" = xt ; then
333 command="$command -gsl"
334 fi
335 if test "x$MPI" = xt ; then
336 command="$command -mpi"
337 fi
338 if test "x$TS" = xt ; then
339 command="$command -ts"
340 fi
341 if test "x$PAPIS" = xt ; then
342 command="$command -papis"
343 else
344 if test "x$PCLS" = xt ; then
345 command="$command -pcls"
346 fi
347 fi
348 printf 'genmake ... ' 1>&2
349 $command > make.log 2>&1
350 RETVAL=$?
351 # Reduce the size of the testing emails!
352 head -100 Makefile > $CDIR/Makefile_head
353 if test "x$RETVAL" != x0 ; then
354 tail make.log
355 echo "genmakemodel: genmake failed" 1>&2
356 cp genmake_* make.log $CDIR
357 return 1
358 else
359 echo "successful" 1>&2
360 fi
361 )
362 fi
363 }
364
365 makeclean()
366 {
367 # makeclean directory
368 if test "x$NOCLEAN" = xt ; then
369 echo "make Clean skipped!"
370 else
371 (
372 cd $1;
373 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
374 if test -r Makefile ; then
375 printf 'clean build-dir: make Clean ... ' 2>&1
376 $MAKE Clean >> make.log 2>&1
377 RETVAL=$?
378 if test "x$RETVAL" != x0 ; then
379 tail make.log
380 echo "makeclean: \"make Clean\" failed" 1>&2
381 cp make.log $CDIR"/make.log"
382 return 1
383 fi
384 fi
385 echo successful 1>&2
386 exit 0
387 )
388 fi
389 }
390
391 run_clean()
392 {
393 # run_clean directory
394 if test "x$NOCLEAN" = xt ; then
395 echo "run_clean skipped!"
396 else
397 (
398 cd $1;
399 printf 'clean run-dir ... ' 2>&1
400 # part of what is done after "make clean" when doing "make CLEAN"
401 find . -name "*.meta" -exec rm {} \;
402 find . -name "*.data" -exec rm {} \;
403 find . -name "fort.*" -exec rm {} \;
404 find . -type l -exec rm {} \;
405 rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime
406 rm -rf mnc_test_*
407 rm -f *_MIT_CE_000.opt0000 costfunction*0000
408 echo successful 1>&2
409 exit 0
410 )
411 fi
412 }
413
414 makedependmodel()
415 {
416 # makedependmodel directory
417 if test "x$NODEPEND" = xt ; then
418 echo "make depend skipped!"
419 else
420 (
421 cd $1;
422 printf 'make depend ... ' 1>&2
423 $MAKE depend >> make.log 2>&1
424 RETVAL=$?
425 if test "x$RETVAL" != x0 ; then
426 tail make.log
427 echo "makedependmodel: make depend failed" 1>&2
428 cp make.log $CDIR"/make.log"
429 return 1
430 else
431 echo successful 1>&2
432 fi
433 )
434 fi
435 }
436
437 makemodel()
438 {
439 # makemodel directory
440 (
441 cd $1;
442 if test -r Makefile ; then
443 printf 'make ... ' 1>&2
444 if test "x$ADM" = x ; then
445 if test "x$JOBS" = x ; then
446 $MAKE >> make.log 2>&1
447 else
448 $MAKE -j $JOBS >> make.log 2>&1
449 fi
450 else
451 $MAKE adall >> make.log 2>&1
452 fi
453 RETVAL=$?
454 if test "x$RETVAL" != x0 ; then
455 tail make.log
456 echo failed 1>&2
457 cp make.log $CDIR"/make.log"
458 return 1
459 else
460 echo successful 1>&2
461 fi
462 fi
463 )
464 }
465
466 symlink_mpifiles()
467 {
468 # Put special links so that MPI specific files are used
469 # This MUST be invoked between makeclean and makelinks because
470 # the Makefile will link to non-mpi files by default
471
472 dir=$1
473 code_dir=$2
474 BUILD_DIR=$dir/$3
475 CODE_DIR=$dir/$code_dir
476
477 # These are files that should replace their counter-part when using -mpi
478 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi" -print)`
479
480 # Is this an MPI run?
481 if test "x$MPI" = xt ; then
482 # YES: We symbolically link these files to the build
483 # dir so long as there is no real file in place
484 for ii in $MPI_FILES ; do
485 i=`echo $ii | sed 's:^\./::'`
486 name=`echo $i | sed 's:_mpi::' `
487 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
488 RETVAL=$?
489 if test "x$RETVAL" != x0 ; then
490 if ! test -f $BUILD_DIR/$i ; then
491 #echo Linking $name to $i
492 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
493 fi
494 fi
495 done
496 else
497 # NO: We undo any _mpi symbolically linked files
498 for ii in $MPI_FILES ; do
499 i=`echo $ii | sed 's:^\./::'`
500 name=`echo $i | sed 's:_mpi::' `
501 if test -L $BUILD_DIR/$name ; then
502 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
503 RETVAL=$?
504 if test "x$RETVAL" = x0 ; then
505 #echo Un-linking $name from $linktarg
506 rm -f $BUILD_DIR/$name
507 fi
508 fi
509 done
510 fi
511
512 }
513
514 linkdata()
515 {
516 # linkdata run_dir input_dir_1 input_dir_2 ...
517 #
518 # symbolically link data files to run directory
519 if test -d $1 ; then
520 (
521 cd $1 ; shift
522 if test -r "../"$1"/eedata.mth" ; then
523 # found eedata.mth in 1rst input dir and it is readable
524 if test "x$MULTI_THREAD" = "xt" ; then
525 # multi-threaded test: remove symbolic link & link eedata.mth
526 if test -h eedata ; then rm -f eedata ; fi
527 if test ! -r eedata ; then
528 ln -sf "../"$1"/eedata.mth" eedata ;
529 printf 'eedata.mth ' 1>&2
530 fi
531 else
532 # not multi-threaded test: remove eedata symbolic link
533 if test -h eedata ; then rm -f eedata ; fi
534 fi
535 fi
536 prevDir='NONE'
537 for ldir in $* ; do
538 if test -d "../"$ldir -a $ldir != $prevDir ; then
539 printf 'ldir='${ldir} 1>&2
540 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
541 for i in $files ; do
542 if test ! -d "../"$ldir/$i ; then
543 if test ! -r $i ; then
544 printf ' '$i 1>&2
545 ln -sf "../"$ldir"/"$i $i
546 fi
547 fi
548 done
549 if test -x "../"$ldir"/"prepare_run ; then
550 "../"$ldir"/"prepare_run
551 fi
552 printf ' ; ' 1>&2
553 fi
554 prevDir=$ldir
555 done
556 )
557 fi
558 }
559
560 runmodel()
561 {
562 # runmodel directory
563 #
564 # runs "$COMMAND in "directory"
565 # (where "$COMMAND" is relative to "directory")
566 (
567 cd $1
568 printf 'runmodel in %s ...' $1 1>&2
569 # make output.txt
570 echo
571 if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
572 diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1
573 outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; rm -f run.log ; fi
574 fi
575 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
576 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00
577 ln -sf "../"$builddir"/"$EXECUTABLE .
578 fi
579 if test ! -x $EXECUTABLE ; then
580 rm -f run.log ; touch run.log
581 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
582 echo " no executable:" $EXECUTABLE >> run.log
583 RETVAL=8
584 ENDVAL=-1
585 else
586 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
587 # output do not exist or is older than executable:
588 rm -f run.log ; touch run.log
589 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
590 ( eval $COMMAND ) >> run.log 2>&1
591 RETVAL=$?
592 else
593 RETVAL=0
594 if test -f run.log ; then
595 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
596 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
597 else
598 touch run.log
599 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
600 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
601 echo " no previous run.log: assume NORMAL END" >> run.log 2>&1
602 fi
603 fi
604 ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'`
605 fi
606 rm -f run.log_00
607 #if test "x$RETVAL" = x0 ; then
608 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
609 tail run.log
610 echo successful 1>&2
611 # === Reduce the size of the testing emails!
612 #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE
613 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
614 return 0
615 else
616 tail run.log
617 echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2
618 cp run.log $CDIR"/run.log"
619 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
620 return 1
621 fi
622 )
623 }
624
625 createcodelet()
626 {
627 # create codelet for comparing model output
628
629 printf "creating the comparison code (using CC=$CC)... "
630 cat > tr_cmpnum.c <<EOF
631 #include <stdio.h>
632 #include <math.h>
633 int main( int argc, char** argv ) {
634 int linnum,cmplin,best,lncnt;
635 double a,b,abave,relerr;
636 best = -22;
637 lncnt = 0;
638 while( 1 & ( (lncnt+=1) < 999 ) ) {
639 scanf("%d", &linnum);
640 if (linnum == -1) break;
641 scanf("%lf", &a); scanf("%lf", &b);
642 abave = 0.5*(fabs(a)+fabs(b));
643 if ( abave == abave ) {
644 if (abave > 0.0) {
645 relerr=fabs(a-b)/abave;
646 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
647 else { cmplin = -16 ; }
648 best = (best > cmplin) ? best : cmplin; }
649 else { cmplin = -22 ; }
650 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
651 }
652 else {
653 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
654 break; }
655 }
656 if (lncnt == 999) best=-29;
657 if (linnum != -1) best=-99;
658 printf("%d\n", -best);
659 return 0;
660 }
661 EOF
662 $CC -o tr_cmpnum tr_cmpnum.c -lm
663
664 if [ -x ./tr_cmpnum ]; then
665 echo "OK"
666 return 0
667 else
668 echo
669 echo "ERROR: failed to compile comparison code -- please specify"
670 echo " a C compiler using the CC environment variable."
671 exit 1
672 fi
673 }
674
675 formatresults()
676 {
677 # formatresults expt genmake depend make run results*
678
679 nm=$1
680 printf '%s %s %s %s' $2 $3 $4 $5
681 shift; shift; shift; shift; shift;
682 listPrt=$@
683 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
684 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
685 printf '%3s' $listPrt
686 # line below does not work on hp-ux_ia64 : do those substitutions later on
687 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
688
689 if [ $xx = '..' ]; then
690 printf ' N/O '
691 elif [ $xx = '--' ]; then
692 printf ' N/O '
693 elif [ $xx = 99 ]; then
694 printf ' N/O '
695 else
696 if [ $xx -ge $MATCH_CRIT ]; then
697 printf ' pass'
698 else
699 printf ' FAIL'
700 fi
701 fi
702 printf ' %s' $nm
703 printf '\n'
704
705 }
706
707 scandirs()
708 {
709 if [ $# -eq 1 ]; then
710 for arg in * ; do
711 test -f $arg/$1 && echo $arg
712 done
713 else
714 echo $*
715 fi
716 }
717
718
719 ###############################################################################
720
721
722 # Default properties
723 debug=0
724 verbose=1
725 clean=0
726
727 IEEE=true
728 if test "x$MITGCM_IEEE" != x ; then
729 IEEE=$MITGCM_IEEE
730 fi
731 GSL=f
732
733 CLEANUP=f
734 QUICK=f
735 NOGENMAKE=f
736 NOCLEAN=f
737 NODEPEND=f
738 POSTCLEAN=f
739
740 BASH=
741 OPTFILE=NONE
742 ADDRESSES=
743 TESTDIRS=
744 SKIPDIRS=
745 MPACKDIR="../tools/mpack-1.6"
746 HAVE_MPACK=
747 MPACK="$MPACKDIR/mpack"
748 COMMAND=
749 if test "x$MAKE" = x ; then
750 MAKE=make
751 fi
752 if test "x$CC" = x ; then
753 CC=cc
754 fi
755 JOBS=
756 MPI=f
757 MULTI_THREAD=f
758 OUTDIR=
759 DELDIR=
760
761 ADM=
762
763 # Additional monitor types
764 PTRACERS_NUM="1 2 3 4 5"
765
766 MATCH_CRIT=13
767
768 printf "parsing options... "
769
770 ac_prev=
771 for ac_option ; do
772
773 # If the previous option needs an argument, assign it.
774 if test -n "$ac_prev"; then
775 eval "$ac_prev=\$ac_option"
776 ac_prev=
777 continue
778 fi
779
780 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
781
782 case $ac_option in
783
784 -help | --help | -h | --h)
785 usage ;;
786
787 -optfile | --optfile | -of | --of)
788 ac_prev=OPTFILE ;;
789 -optfile=* | --optfile=* | -of=* | --of=*)
790 OPTFILE=$ac_optarg ;;
791
792 -addr | --addr | -a | --a)
793 ac_prev=ADDRESSES ;;
794 -addr=* | --addr=*)
795 ADDRESSES=$ac_optarg ;;
796
797 -tdir | --tdir | -t | --t)
798 ac_prev=TESTDIRS ;;
799 -tdir=* | --tdir=*)
800 TESTDIRS=$ac_optarg ;;
801
802 -skipdir | --skipdir | -skd | --skd)
803 ac_prev=SKIPDIRS ;;
804 -skipdir=* | --skipdir=*)
805 SKIPDIRS=$ac_optarg ;;
806
807 -bash | --bash | -b | --b)
808 ac_prev=BASH ;;
809 -bash=* | --bash=*)
810 BASH=$ac_optarg ;;
811
812 -command | --command | -c | --c)
813 ac_prev=COMMAND ;;
814 -command=* | --command=*)
815 COMMAND=$ac_optarg ;;
816
817 -make | --make | -m | --m)
818 ac_prev=MAKE ;;
819 -make=* | --make=*)
820 MAKE=$ac_optarg ;;
821
822 -odir | --odir)
823 ac_prev=OUTDIR ;;
824 -odir=* | --odir=*)
825 OUTDIR=$ac_optarg ;;
826
827 -ptracers | --ptracers | -ptr | --ptr)
828 ac_prev=PTRACERS_NUM ;;
829 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
830 PTRACERS_NUM=$ac_optarg ;;
831
832 -match | --match ) ac_prev=MATCH_CRIT ;;
833 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
834
835 -j) ac_prev=JOBS ;;
836 -j=*) JOBS=$ac_optarg ;;
837
838 -clean | --clean)
839 CLEANUP=t ; DELDIR=t ;;
840
841 -quick | --quick | -q | --q)
842 QUICK=t ;;
843 -nogenmake | --nogenmake | -ng | --ng)
844 NOGENMAKE=t ;;
845 -noclean | --noclean | -nc | --nc)
846 NOCLEAN=t ;;
847 -nodepend | --nodepend | -nd | --nd)
848 NODEPEND=t ;;
849
850 -postclean | --postclean | -pc | --pc)
851 POSTCLEAN=t ;;
852
853 -mpi) MPI=t ;;
854
855 -mth) MULTI_THREAD=t ;;
856
857 -adm | -ad) ADM=t ;;
858
859 -ieee) IEEE=true ;;
860 -noieee) IEEE= ;;
861 -gsl) GSL=t ;;
862
863 -verbose) verbose=2 ;;
864 -debug) debug=1 ;;
865 -quiet) verbose=0 ;;
866
867 -deldir | -dd) DELDIR=t ;;
868
869 -ts) TS=t;;
870
871 -papis) PAPIS=t;;
872
873 -pcls) PCL=t;;
874
875 -*)
876 echo "Error: unrecognized option: "$ac_option
877 usage
878 ;;
879
880 *)
881 echo "Error: unrecognized argument: "$ac_option
882 usage
883 ;;
884
885 esac
886
887 done
888
889 if test "x$QUICK" = xt ; then
890 NOGENMAKE=t
891 NOCLEAN=t
892 NODEPEND=t
893 fi
894
895 #- setting for forward or ADM testing
896 if test "x$ADM" = xt ; then
897 code_dir=code_ad
898 inputdir=input_ad
899 ref_outp="output_adm.txt"
900 EXECUTABLE="mitgcmuv_ad"
901 else
902 code_dir=code
903 inputdir=input
904 ref_outp="output.txt"
905 EXECUTABLE="mitgcmuv"
906 fi
907
908 if test "x$TESTDIRS" = x ; then
909 LIST=`scandirs results/$ref_outp`
910 else
911 #- expand group of experiments:
912 LIST=" "
913 for xx in $TESTDIRS
914 do
915 case $xx in
916 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
917 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
918 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
919 ;;
920 'tutorials')
921 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
922 *) LIST=${LIST}" "$xx ;;
923 esac
924 done
925 fi
926 #echo 'LIST='${LIST}'<'
927 #- skip dirs, remove duplicate and non-directory:
928 TESTDIRS=" "
929 count=0
930 for xx in $LIST
931 do
932 yy=`echo $SKIPDIRS | grep -c $xx`
933 if test $yy = 0 ; then
934 if test -d $xx ; then
935 yy=`echo $TESTDIRS | grep -c $xx`
936 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
937 else count=1 ;
938 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
939 fi
940 else
941 if test $count = 1 ; then echo -n ", \"$xx\""
942 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
943 fi
944 fi
945 done
946 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
947 #echo 'TESTDIRS='${TESTDIRS}'<'
948
949 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
950 OPTFILE=$MITGCM_OF
951 fi
952
953 OUTPUTFILE=$ref_outp
954 if test "x$COMMAND" = x ; then
955 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
956 fi
957 if test "x$MPI" = xt ; then
958 OUTPUTFILE="STDOUT.0000"
959 fi
960
961 echo "OK (COMMAND= $COMMAND )"
962
963 # set the Default List of output variables to be checked:
964 # (use default or load experiment-specific list from file "tr_checklist")
965 # content : 1rst = main variable used to decide if it pass or FAIL
966 # others = number of matching digits to be printed in summary.txt
967 if test "x$ADM" = x ; then
968 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
969 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
970 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
971 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
972 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
973 else
974 DEF_CHECK_LIST='Grad Cost Grad'
975 EMPTY_RESULTS='.. ..'
976 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
977 fi
978
979 # create the FORTRAN comparison code
980 createcodelet
981
982 # build the mpack utility (if ADDRESSES = NONE, do it to test the build)
983 if test "x$ADDRESSES" = x ; then
984 echo "skipping mpack build"
985 else
986 build_mpack
987 fi
988
989 # Create a uniquely named directory to store results
990 CMDLINE=$0
991 for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done
992 MACH=`hostname`
993 UNAMEA=`uname -a`
994 DATE=`date +%Y%m%d`
995 BASE="tr_"$MACH"_"$DATE"_"
996 if test "x$OUTDIR" != x ; then
997 BASE="tr_"$OUTDIR"_"$DATE"_"
998 fi
999 DNUM=0
1000 DRESULTS="$BASE$DNUM"
1001 while test -e $DRESULTS ; do
1002 DNUM=$(( $DNUM + 1 ))
1003 DRESULTS="$BASE$DNUM"
1004 done
1005 mkdir $DRESULTS
1006 RETVAL=$?
1007 if test "x$RETVAL" != x0 ; then
1008 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1009 exit 1
1010 fi
1011 SUMMARY="$DRESULTS/summary.txt"
1012 start_date=`date`
1013 echo $start_date > $SUMMARY
1014 echo 'run:' $CMDLINE >> $SUMMARY
1015 echo 'on :' $UNAMEA >> $SUMMARY
1016
1017 of_path=
1018 if test "x$OPTFILE" != xNONE ; then
1019 if test -r $OPTFILE ; then
1020 # get the path
1021 path=${OPTFILE%/*}
1022 if test "x$path" = x ; then
1023 of_path=`pwd`
1024 else
1025 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1026 fi
1027 file=${OPTFILE##*/}
1028 OPTFILE=$of_path/$file
1029 cp $OPTFILE $DRESULTS
1030 echo >> $SUMMARY
1031 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1032 else
1033 echo | tee $SUMMARY
1034 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1035 exit 1
1036 fi
1037 else
1038 echo >> $SUMMARY
1039 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
1040 echo " so the genmake default will be used." >> $SUMMARY
1041 fi
1042 echo
1043 echo >> $SUMMARY
1044 if test "x$ADM" = x ; then
1045 if [ $MATCH_CRIT -lt 10 ] ;
1046 then line_0="default "$MATCH_CRIT ;
1047 else line_0="default "$MATCH_CRIT ; fi
1048 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1049 # line_0=" ----T----- ----S----- ----U----- ----V-----"
1050 line_1="G D M c m s m s m s m s"
1051 line_2="E p a R g m m e . m m e . m m e . m m e ."
1052 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
1053 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1054 for ii in $PTRACERS_NUM ; do
1055 # tst=`eval 'echo $HAVE_PTR0'$ii`
1056 # if test "x$tst" = xt ; then
1057 line_0="$line_0 --PTR 0"$ii"--"
1058 line_1="$line_1 m s"
1059 line_2="$line_2 m m e ."
1060 line_3="$line_3 i a a d"
1061 line_4="$line_4 n x n ."
1062 # fi
1063 done
1064 echo "$line_0" | tee -a $SUMMARY
1065 echo "$line_1" | tee -a $SUMMARY
1066 echo "$line_2" | tee -a $SUMMARY
1067 echo "$line_3" | tee -a $SUMMARY
1068 echo "$line_4" | tee -a $SUMMARY
1069 echo " " | tee -a $SUMMARY
1070 else
1071 echo "ADJOINT=true" >> $SUMMARY
1072 echo >> $SUMMARY
1073 if [ $MATCH_CRIT -lt 10 ] ;
1074 then line_0="default "$MATCH_CRIT ;
1075 else line_0="default "$MATCH_CRIT ; fi
1076 echo "$line_0" | tee -a $SUMMARY
1077 cat << EOF | tee -a $SUMMARY
1078 G D M C G
1079 E p a R o r
1080 N n k u s a
1081 2 d e n t d
1082
1083 EOF
1084 fi
1085
1086 # ...and each test directory...
1087 for dir in $TESTDIRS ; do
1088
1089 # set builddir & rundir:
1090 builddir="build"
1091 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1092 rundir="run"
1093 if test ! -d $dir/$rundir ; then
1094 rundir=$builddir
1095 fi
1096 CODE_DIR=$dir/$code_dir
1097 BUILD_DIR=$dir/$builddir
1098
1099 # Cleanup only!
1100 if test "x$CLEANUP" = xt ; then
1101 if test -r $BUILD_DIR/Makefile ; then
1102 echo ' ------ clean dir:' $dir/build
1103 ( cd $BUILD_DIR ; make CLEAN )
1104 fi
1105 if test -d $dir/$rundir/CVS ; then
1106 echo ' ------ clean dir:' $dir/$rundir
1107 run_clean $dir/$rundir
1108 fi
1109 (
1110 cd $dir
1111 rm -rf tr_run.*
1112 )
1113 continue
1114 fi
1115
1116 # Verify that the testdir exists and contains previous
1117 # results in the correct location--or skip this directory!
1118 fout=$dir"/results/"$ref_outp
1119 if test ! -r $fout ; then
1120 echo "can't read \"$fout\" -- skipping $dir"
1121 continue
1122 fi
1123 if test "x$ADM" = x ; then
1124 check_for_add_mon_output $fout
1125 fi
1126
1127 # Check for additional types of monitor output
1128
1129 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
1130 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1131 continue
1132 fi
1133 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1134 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1135 continue
1136 fi
1137
1138 # Check whether there are "extra runs" for this testdir
1139 extra_runs=
1140 ex_run_dirs=`( cd $dir ; echo $inputdir.* )`
1141 #echo "ex_run_dirs='$ex_run_dirs'"
1142 for exd in $ex_run_dirs ; do
1143 name=`echo $exd | sed -e "s/$inputdir\.//"`
1144 refExOut=`echo $ref_outp | sed "s/\./.${name}./"`
1145 outf="$dir/results/$refExOut"
1146 if test -f $outf -a -r $outf ; then
1147 if test "x$MULTI_THREAD" = "xt" ; then
1148 if test -r $dir"/"$exd"/eedata.mth" ; then
1149 extra_runs="$extra_runs $name"
1150 #else echo $dir"/"$exd"/eedata.mth: not found"
1151 fi
1152 else
1153 extra_runs="$extra_runs $name"
1154 fi
1155 fi
1156 done
1157
1158 echo "-------------------------------------------------------------------------------"
1159 echo
1160 if test "x$extra_runs" = "x" ; then
1161 echo "Experiment: $dir"
1162 else
1163 echo "Experiment: $dir ; extra_runs=$extra_runs"
1164 fi
1165 echo
1166 unset genmake makedepend make run
1167 results=$EMPTY_RESULTS
1168
1169 # Create an output dir for each OPTFILE/tdir combination
1170 rel_CDIR=$DRESULTS"/"$dir
1171 mkdir $rel_CDIR
1172 CDIR=`pwd`"/$rel_CDIR"
1173
1174 if test "x$CLEANUP" = xt ; then
1175 echo '====>>> this is to check that we never go through this part <<< ==='
1176 makeclean $dir/$builddir \
1177 && run_clean $dir/$rundir
1178 else
1179 genmakemodel $dir/$builddir && genmake=Y \
1180 && makeclean $dir/$builddir \
1181 && run_clean $dir/$rundir \
1182 && symlink_mpifiles $dir $code_dir $builddir \
1183 && makedependmodel $dir/$builddir && makedepend=Y \
1184 && makemodel $dir/$builddir && make=Y \
1185 && linkdata $dir/$rundir $inputdir input \
1186 && runmodel $dir/$rundir && run=Y \
1187 && results=`testoutput_run $dir $rundir $ref_outp`
1188 fi
1189
1190 echo
1191 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1192 echo
1193 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1194 touch $CDIR"/summary.txt"
1195 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1196 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1197 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1198 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1199 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1200 if test "x$ADM" = xt ; then
1201 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1202 grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \
1203 >> $CDIR"/summary.txt"
1204 fi
1205
1206 for ex in $extra_runs ; do
1207 unset run
1208 results=$EMPTY_RESULTS
1209 # reference output file
1210 refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"`
1211 # Create an output dir for each OPTFILE/tdir.ex combination
1212 rel_CDIR=$DRESULTS"/"$dir"."$ex
1213 mkdir $rel_CDIR
1214 CDIR=`pwd`"/$rel_CDIR"
1215 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
1216 run_clean $dir/tr_run.$ex
1217 linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input
1218 runmodel $dir/tr_run.$ex && run=Y \
1219 && results=`testoutput_run $dir tr_run.$ex $refExOut`
1220 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1221 fres="$fres.$ex"
1222 echo
1223 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1224 touch $CDIR"/summary.txt"
1225 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1226 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1227 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1228 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1229 echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt"
1230 if test "x$ADM" = xt ; then
1231 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1232 grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \
1233 >> $CDIR"/summary.txt"
1234 fi
1235 if test "x$POSTCLEAN" = xt ; then
1236 run_clean $dir/tr_run.$ex
1237 fi
1238 done
1239
1240 #postclean $dir/$builddir
1241 if test "x$POSTCLEAN" = xt ; then
1242 makeclean $dir/$builddir \
1243 && run_clean $dir/$rundir
1244 fi
1245
1246 echo "-------------------------------------------------------------------------------"
1247
1248 done
1249
1250 printf "Start time: " >> $SUMMARY
1251 echo $start_date >> $SUMMARY
1252 printf "End time: " >> $SUMMARY
1253 date >> $SUMMARY
1254
1255 # If addresses were supplied and mpack built successfully, then try
1256 # to send email using mpack.
1257 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1258 echo "No results email was sent."
1259 else
1260 if test "x$HAVE_MPACK" = xt ; then
1261 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1262 && gzip $DRESULTS".tar" \
1263 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1264 RETVAL=$?
1265 if test "x$RETVAL" != x0 ; then
1266 echo
1267 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1268 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1269 echo " summary of results from the directory \"$DRESULTS\"."
1270 echo
1271 else
1272 echo
1273 echo "An email containing results was sent to the following addresses:"
1274 echo " \"$ADDRESSES\""
1275 echo
1276 fi
1277 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1278 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1279 fi
1280 fi
1281
1282 rm -f tr_cmpnum.c tr_cmpnum
1283
1284 if test "x$CLEANUP" != xt ; then
1285 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'
1286 if test -e tr_out.txt ; then
1287 mv tr_out.txt tr_out.txt.old
1288 fi
1289 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt
1290 fi
1291
1292 if test "x$DELDIR" = xt ; then
1293 rm -rf $DRESULTS
1294 fi

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