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Revision 1.108 - (show annotations) (download)
Thu Dec 6 04:04:38 2007 UTC (16 years, 3 months ago) by jmc
Branch: MAIN
Changes since 1.107: +33 -44 lines
allows to run several Adjoint tests (with input files from input_ad.[xx])
with the same executable and compare output to results/output_adm.[xx].txt

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.107 2007/10/29 19:14:12 jmc Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi threaded (using eedata.mth)"
15 echo " (-mpi) compile and run using MPI"
16 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
17 echo " (DEF=\"-ieee\")"
18 echo " (-of=|-optfile=)STRING list of optfiles to use"
19 echo " (-a|-addr) STRING list of email recipients"
20 echo " (DEF=\"\" no email is sent)"
21 echo " (-t|-tdir) STRING list of group and/or exp. dirs to test"
22 echo " (recognized groups: basic, tutorials)"
23 echo " (DEF=\"\" which test all)"
24 echo " (-skd|-skipdir) STRING list of exp. dirs to skip"
25 echo " (DEF=\"\" which test all)"
26 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
27 echo " Bourne-compatible \"sh\" shell"
28 echo " (DEF=\"\" for \"bash\")"
29 echo " (-adm|-ad) perform an adjoint run"
30 echo " (-command) STRING command to run"
31 echo " (DEF=\"make output.txt\")"
32 echo " (-m|-make) STRING command to use for \"make\""
33 echo " (DEF=\"make\")"
34 echo " (-odir) STRING used to build output directory name"
35 echo " (DEF=\"hostname\")"
36 echo " (-ptr|-ptracers) STRING specify which ptracers to test"
37 echo " (DEF=\"1 2 3 4 5\")"
38 echo " (-match) NUMBER Matching Criteria (number of digits)"
39 echo " (DEF=\"12\")"
40 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
41 echo " (-clean) *ONLY* run \"make CLEAN\""
42 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
43 echo " (-nogenmake|-ng) skip the genmake stage"
44 echo " (-noclean|-nc) skip the \"make clean\" stage"
45 echo " (-nodepend|-nd) skip the \"make depend\" stage"
46 echo " (-deldir|-dd) on success, delete the output directory"
47 echo " (-ts) provide timing information per timestep"
48 echo " (-papis) provide MFlop/s per timestep using PAPI"
49 echo " (-pcls) provide MFlop/s per timestep using PCL"
50 echo
51 echo "and where STRING can be a whitespace-delimited list"
52 echo "such as:"
53 echo
54 echo " -t 'exp0 exp2 exp3' "
55 echo " -addr='abc@123.com testing@home.org'"
56 echo
57 echo "provided that the expression is properly quoted within the current"
58 echo "shell (note the use of single quotes to protect white space)."
59 echo
60 exit 1
61 }
62
63 # build the mpack utility
64 build_mpack()
65 {
66 printf "building the mpack utility... "
67 if test ! -x "$MPACKDIR/mpack" ; then
68 if test ! -d $MPACKDIR ; then
69 echo
70 echo "Error: can't find \"$MPACKDIR\""
71 echo " are you sure this program is being run in the correct "
72 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
73 echo
74 HAVE_MPACK=f
75 fi
76 printf "building mpack... "
77 if test "x$CC" = x ; then
78 export CC=cc
79 fi
80 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
81 RETVAL=$?
82 if test "x$RETVAL" != x0 ; then
83 echo
84 echo "Error building the mpack tools at: $MPACK_DIR"
85 echo
86 HAVE_MPACK=f
87 else
88 rm -f tr_build_mpack.out
89 HAVE_MPACK=t
90 fi
91 else
92 HAVE_MPACK=t
93 fi
94 echo "OK"
95 }
96
97 testoutput_var()
98 {
99 # testoutput_var dir s1 label subdir reference_output
100 #
101 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
102 # with same output from reference file $dir/results/$reference_output
103 # using search strings s1 and text label
104
105 if [ $debug -gt 0 ]; then
106 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
107 fi
108 if [ -r $1/$4/$OUTPUTFILE ]; then
109 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
110 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
111 if [ $lncntA -lt 2 ]; then
112 if [ $verbose -gt 0 ]; then
113 echo Not enough lines of output when searching for "$2" 1>&2
114 fi
115 return 99
116 fi
117 else
118 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
119 return 99
120 fi
121 if [ $debug -gt 0 ]; then
122 echo testoutput_var: grep "$2" $1/results/$5 1>&2
123 fi
124 grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt
125 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
126 if [ $lncntB -lt 2 ]; then
127 if [ $verbose -gt 0 ]; then
128 echo Not enough lines of output when searching for "$2" 1>&2
129 fi
130 return 99
131 fi
132 if [ $lncntA -ne $lncntB ]; then
133 if [ $verbose -gt 0 ]; then
134 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
135 fi
136 return 99
137 fi
138 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
139 if [ $has_nan -gt 0 ] ; then
140 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
141 return 99
142 fi
143 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
144 if [ $has_inf -gt 0 ] ; then
145 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
146 return 99
147 fi
148 if [ $debug -gt 0 ]; then
149 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
150 fi
151 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
152 if [ $debug -gt 0 ]; then
153 echo testoutput_var: compare_lines 1>&2
154 fi
155 if [ $verbose -gt 1 ]; then
156 cat tmp3.txt 1>&2
157 fi
158 echo "-1" >> tmp3.txt
159 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
160 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
161 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
162 if [ $digits_of_similarity -eq 99 ]; then
163 if [ $verbose -gt 0 ]; then
164 echo testoutput_var: No comparison was available for \"$3\" 1>&2
165 fi
166 digits_of_similarity=99
167 else
168 if [ $verbose -gt 0 ]; then
169 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
170 fi
171 fi
172 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
173
174 return $digits_of_similarity
175 }
176
177 check_for_add_mon_output()
178 {
179 # Check for additional types of monitor output
180 if test "x$1" = x ; then
181 return
182 fi
183
184 for ii in $PTRACERS_NUM ; do
185 eval "HAVE_PTR0"$ii"=f"
186 done
187
188 ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max"
189 ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
190 for ii in $PTRACERS_NUM ; do
191 for jj in $ptr_add ; do
192 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
193 tst=`grep $name $1 | wc -l | awk '{print $1}'`
194 if test ! "x$tst" = x0 ; then
195 eval "HAVE_PTR0"$ii"=t"
196 fi
197 done
198 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"'
199 done
200 }
201
202 testoutput_run()
203 {
204 # testoutput_run directory subdir reference_output
205 #
206 # test output from 1 run in "directory"
207 # --> same processing for adjoint & forward test
208 # default list of output variables to be checked:
209 # 1rst : main variable used to decide if it pass or FAIL
210 # others : number of matching digits to be printed in summary.txt
211 listChk=$DEF_CHECK_LIST
212 # load experiment-specific list from file "tr_checklist" (if it exist)
213 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
214 sVar=`echo $listChk | awk '{print $1}'`
215 # remove 1rst var and expand the list: + => min max mean s.d
216 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
217 | sed 's/+//g' | sed "s/^$sVar//"`
218 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
219 for ii in 1 2 3 4 5 6 7 8 9 ; do
220 tst=`eval 'echo "$HAVE_PTR0'$ii'"'`
221 #echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
222 if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi
223 done
224 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'`
225 if test $tst != 1 ; then
226 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
227 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
228 echo "==> WARNING: in checked list:" $listVar 1>&2
229 #- put it back once:
230 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
231 fi
232 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
233 echo "listVar='$listVar'" > $CDIR"/summary.txt"
234 allargs=""
235 for xx in $listVar
236 do
237 case $xx in
238 'PS') if [ $debug -gt 0 ]
239 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
240 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$?
241 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
242 'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;;
243 'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;;
244 'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;;
245 'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;;
246 'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;;
247 'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;;
248 'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;;
249 'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;;
250 'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;;
251 'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;;
252 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;;
253 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;;
254 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;;
255 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;;
256 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;;
257 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;;
258 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;;
259 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;;
260 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
261 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;;
262 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
263 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;;
264 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
265 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;;
266 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
267 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;;
268 'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;;
269 'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;;
270 'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;;
271 'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;;
272 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;;
273 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;;
274 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;;
275 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;;
276 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;;
277 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;;
278 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;;
279 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;;
280 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;;
281 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;;
282 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;;
283 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;;
284 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;;
285 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;;
286 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
287 esac
288 if test $xx = $sVar
289 then allargs="$allargs > $yy <"
290 else allargs="$allargs $yy"
291 fi
292 done
293
294 nbVar=`echo $listVar | awk '{print NF}'`
295 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
296 #-- fill line (up to standard length) with dot:
297 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
298 echo $allargs $adNul
299 else
300 echo $allargs
301 fi
302 # <-- same processing for adjoint & forward test
303 }
304
305 genmakemodel()
306 {
307 # genmakemodel directory
308 if test "x$NOGENMAKE" = xt ; then
309 echo "genmake skipped!"
310 else
311 if test "x$BASH" = x ; then
312 GENMAKE2="../../../tools/genmake2"
313 else
314 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
315 fi
316 (
317 cd $1;
318 command="$GENMAKE2 -ds -m $MAKE"
319 if test "x$ADM" = x ; then
320 command="$command --mods=../code"
321 else
322 command="$command --mods=../code_ad"
323 fi
324 if test "x$OPTFILE" != xNONE ; then
325 command="$command --optfile=$OPTFILE"
326 fi
327 if test "x$IEEE" != x ; then
328 command="$command -ieee"
329 fi
330 if test "x$MPI" = xt ; then
331 command="$command -mpi"
332 fi
333 if test "x$TS" = xt ; then
334 command="$command -ts"
335 fi
336 if test "x$PAPIS" = xt ; then
337 command="$command -papis"
338 else
339 if test "x$PCLS" = xt ; then
340 command="$command -pcls"
341 fi
342 fi
343 printf 'genmake ... ' 1>&2
344 $command > make.log 2>&1
345 RETVAL=$?
346 # Reduce the size of the testing emails!
347 head -100 Makefile > $CDIR/Makefile_head
348 if test "x$RETVAL" != x0 ; then
349 tail make.log
350 echo "genmakemodel: genmake failed" 1>&2
351 cp genmake_* make.log $CDIR
352 return 1
353 else
354 echo "successful" 1>&2
355 fi
356 )
357 fi
358 }
359
360 makeclean()
361 {
362 # makeclean directory
363 if test "x$NOCLEAN" = xt ; then
364 echo "make Clean skipped!"
365 else
366 (
367 cd $1;
368 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
369 if test -r Makefile ; then
370 printf 'clean build-dir: make Clean ... ' 2>&1
371 $MAKE Clean >> make.log 2>&1
372 RETVAL=$?
373 if test "x$RETVAL" != x0 ; then
374 tail make.log
375 echo "makeclean: \"make Clean\" failed" 1>&2
376 cp make.log $CDIR"/make.log"
377 return 1
378 fi
379 fi
380 echo successful 1>&2
381 exit 0
382 )
383 fi
384 }
385
386 run_clean()
387 {
388 # run_clean directory
389 if test "x$NOCLEAN" = xt ; then
390 echo "run_clean skipped!"
391 else
392 (
393 cd $1;
394 printf 'clean run-dir ... ' 2>&1
395 # part of what is done after "make clean" when doing "make CLEAN"
396 find . -name "*.meta" -exec rm {} \;
397 find . -name "*.data" -exec rm {} \;
398 find . -name "fort.*" -exec rm {} \;
399 find . -type l -exec rm {} \;
400 rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime
401 rm -rf mnc_test_*
402 rm -f *_MIT_CE_000.opt0000 costfunction*0000
403 echo successful 1>&2
404 exit 0
405 )
406 fi
407 }
408
409 makedependmodel()
410 {
411 # makedependmodel directory
412 if test "x$NODEPEND" = xt ; then
413 echo "make depend skipped!"
414 else
415 (
416 cd $1;
417 printf 'make depend ... ' 1>&2
418 $MAKE depend >> make.log 2>&1
419 RETVAL=$?
420 if test "x$RETVAL" != x0 ; then
421 tail make.log
422 echo "makedependmodel: make depend failed" 1>&2
423 cp make.log $CDIR"/make.log"
424 return 1
425 else
426 echo successful 1>&2
427 fi
428 )
429 fi
430 }
431
432 makemodel()
433 {
434 # makemodel directory
435 (
436 cd $1;
437 if test -r Makefile ; then
438 printf 'make ... ' 1>&2
439 if test "x$ADM" = x ; then
440 if test "x$JOBS" = x ; then
441 $MAKE >> make.log 2>&1
442 else
443 $MAKE -j $JOBS >> make.log 2>&1
444 fi
445 else
446 $MAKE adall >> make.log 2>&1
447 fi
448 RETVAL=$?
449 if test "x$RETVAL" != x0 ; then
450 tail make.log
451 echo failed 1>&2
452 cp make.log $CDIR"/make.log"
453 return 1
454 else
455 echo successful 1>&2
456 fi
457 fi
458 )
459 }
460
461 symlink_mpifiles()
462 {
463 # Put special links so that MPI specific files are used
464 # This MUST be invoked between makeclean and makelinks because
465 # the Makefile will link to non-mpi files by default
466
467 dir=$1
468 code_dir=$2
469 BUILD_DIR=$dir/$3
470 CODE_DIR=$dir/$code_dir
471
472 # These are files that should replace their counter-part when using -mpi
473 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
474
475 # Is this an MPI run?
476 if test "x$MPI" = xt ; then
477 # YES: We symbolically link these files to the build
478 # dir so long as there is no real file in place
479 for ii in $MPI_FILES ; do
480 i=`echo $ii | sed 's:^\./::'`
481 name=`echo $i | sed 's:_mpi::' `
482 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
483 RETVAL=$?
484 if test "x$RETVAL" != x0 ; then
485 if ! test -f $BUILD_DIR/$i ; then
486 #echo Linking $name to $i
487 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
488 fi
489 fi
490 done
491 else
492 # NO: We undo any _mpi symbolically linked files
493 for ii in $MPI_FILES ; do
494 i=`echo $ii | sed 's:^\./::'`
495 name=`echo $i | sed 's:_mpi::' `
496 if test -L $BUILD_DIR/$name ; then
497 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
498 RETVAL=$?
499 if test "x$RETVAL" = x0 ; then
500 #echo Un-linking $name from $linktarg
501 rm -f $BUILD_DIR/$name
502 fi
503 fi
504 done
505 fi
506
507 }
508
509 linkdata()
510 {
511 # linkdata run_dir input_dir_1 input_dir_2 ...
512 #
513 # symbolically link data files to run directory
514 if test -d $1 ; then
515 (
516 cd $1 ; shift
517 if test -r "../"$1"/eedata.mth" ; then
518 # found eedata.mth in 1rst input dir and it is readable
519 if test "x$MULTI_THREAD" = "xt" ; then
520 # multi-threaded test: remove symbolic link & link eedata.mth
521 if test -h eedata ; then rm -f eedata ; fi
522 if test ! -r eedata ; then
523 ln -sf "../"$1"/eedata.mth" eedata ;
524 printf 'eedata.mth ' 1>&2
525 fi
526 else
527 # not multi-threaded test: remove eedata symbolic link
528 if test -h eedata ; then rm -f eedata ; fi
529 fi
530 fi
531 prevDir='NONE'
532 for ldir in $* ; do
533 if test -d "../"$ldir -a $ldir != $prevDir ; then
534 printf 'ldir='${ldir} 1>&2
535 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
536 for i in $files ; do
537 if test ! -d "../"$ldir/$i ; then
538 if test ! -r $i ; then
539 printf ' '$i 1>&2
540 ln -sf "../"$ldir"/"$i $i
541 fi
542 fi
543 done
544 if test -x "../"$ldir"/"prepare_run ; then
545 "../"$ldir"/"prepare_run
546 fi
547 printf ' ; ' 1>&2
548 fi
549 prevDir=$ldir
550 done
551 )
552 fi
553 }
554
555 runmodel()
556 {
557 # runmodel directory
558 #
559 # runs "$COMMAND in "directory"
560 # (where "$COMMAND" is relative to "directory")
561 (
562 cd $1
563 printf 'runmodel in %s ...' $1 1>&2
564 # make output.txt
565 echo
566 if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
567 diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1
568 outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; rm -f run.log ; fi
569 fi
570 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
571 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00
572 ln -sf "../"$builddir"/"$EXECUTABLE .
573 fi
574 if test ! -x $EXECUTABLE ; then
575 rm -f run.log ; touch run.log
576 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
577 echo " no executable:" $EXECUTABLE >> run.log
578 RETVAL=8
579 ENDVAL=-1
580 else
581 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
582 # output do not exist or is older than executable:
583 rm -f run.log ; touch run.log
584 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
585 ( eval $COMMAND ) >> run.log 2>&1
586 RETVAL=$?
587 else
588 RETVAL=0
589 if test -f run.log ; then
590 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
591 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
592 else
593 touch run.log
594 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
595 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
596 echo " no previous run.log: assume NORMAL END" >> run.log 2>&1
597 fi
598 fi
599 ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'`
600 fi
601 rm -f run.log_00
602 #if test "x$RETVAL" = x0 ; then
603 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
604 tail run.log
605 echo successful 1>&2
606 # === Reduce the size of the testing emails!
607 #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE
608 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
609 return 0
610 else
611 tail run.log
612 echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2
613 cp run.log $CDIR"/run.log"
614 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
615 return 1
616 fi
617 )
618 }
619
620 createcodelet()
621 {
622 # create codelet for comparing model output
623
624 printf "creating the comparison code... "
625 cat > tr_cmpnum.c <<EOF
626 #include <stdio.h>
627 #include <math.h>
628 int main( int argc, char** argv ) {
629 int linnum,cmplin,best,lncnt;
630 double a,b,abave,relerr;
631 best = -22;
632 lncnt = 0;
633 while( 1 & ( (lncnt+=1) < 999 ) ) {
634 scanf("%d", &linnum);
635 if (linnum == -1) break;
636 scanf("%lf", &a); scanf("%lf", &b);
637 abave = 0.5*(fabs(a)+fabs(b));
638 if ( abave == abave ) {
639 if (abave > 0.0) {
640 relerr=fabs(a-b)/abave;
641 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
642 else { cmplin = -16 ; }
643 best = (best > cmplin) ? best : cmplin; }
644 else { cmplin = -22 ; }
645 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
646 }
647 else {
648 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
649 break; }
650 }
651 if (lncnt == 999) best=-29;
652 if (linnum != -1) best=-99;
653 printf("%d\n", -best);
654 return 0;
655 }
656 EOF
657 $CC -o tr_cmpnum tr_cmpnum.c -lm
658
659 if [ -x ./tr_cmpnum ]; then
660 echo "OK"
661 return 0
662 else
663 echo
664 echo "ERROR: failed to compile comparison code -- please specify"
665 echo " a C compiler using the CC environment variable."
666 exit 1
667 fi
668 }
669
670 formatresults()
671 {
672 # formatresults expt genmake depend make run results*
673
674 nm=$1
675 printf '%s %s %s %s' $2 $3 $4 $5
676 shift; shift; shift; shift; shift;
677 listPrt=$@
678 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
679 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
680 printf '%3s' $listPrt
681 # line below does not work on hp-ux_ia64 : do those substitutions later on
682 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
683
684 if [ $xx = '..' ]; then
685 printf ' N/O '
686 elif [ $xx = '--' ]; then
687 printf ' N/O '
688 elif [ $xx = 99 ]; then
689 printf ' N/O '
690 else
691 if [ $xx -ge $MATCH_CRIT ]; then
692 printf ' pass'
693 else
694 printf ' FAIL'
695 fi
696 fi
697 printf ' %s' $nm
698 printf '\n'
699
700 }
701
702 scandirs()
703 {
704 if [ $# -eq 1 ]; then
705 for arg in * ; do
706 test -f $arg/$1 && echo $arg
707 done
708 else
709 echo $*
710 fi
711 }
712
713
714 ###############################################################################
715
716
717 # Default properties
718 debug=0
719 verbose=1
720 clean=0
721 expts=''
722 # ieee=1
723
724 IEEE=true
725 if test "x$MITGCM_IEEE" != x ; then
726 IEEE=$MITGCM_IEEE
727 fi
728
729
730 CLEANUP=f
731 QUICK=f
732 NOGENMAKE=f
733 NOCLEAN=f
734 NODEPEND=f
735 POSTCLEAN=f
736
737 BASH=
738 OPTFILE=NONE
739 ADDRESSES=
740 TESTDIRS=
741 SKIPDIRS=
742 MPACKDIR="../tools/mpack-1.6"
743 HAVE_MPACK=
744 MPACK="$MPACKDIR/mpack"
745 COMMAND=
746 if test "x$MAKE" = x ; then
747 MAKE=make
748 fi
749 if test "x$CC" = x ; then
750 CC=cc
751 fi
752 JOBS=
753 MPI=f
754 MULTI_THREAD=f
755 OUTDIR=
756 DELDIR=
757
758 ADM=
759
760 # Additional monitor types
761 PTRACERS_NUM="1 2 3 4 5"
762
763 MATCH_CRIT=13
764
765 printf "parsing options... "
766
767 ac_prev=
768 for ac_option ; do
769
770 # If the previous option needs an argument, assign it.
771 if test -n "$ac_prev"; then
772 eval "$ac_prev=\$ac_option"
773 ac_prev=
774 continue
775 fi
776
777 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
778
779 case $ac_option in
780
781 -help | --help | -h | --h)
782 usage ;;
783
784 -optfile | --optfile | -of | --of)
785 ac_prev=OPTFILE ;;
786 -optfile=* | --optfile=* | -of=* | --of=*)
787 OPTFILE=$ac_optarg ;;
788
789 -addr | --addr | -a | --a)
790 ac_prev=ADDRESSES ;;
791 -addr=* | --addr=*)
792 ADDRESSES=$ac_optarg ;;
793
794 -tdir | --tdir | -t | --t)
795 ac_prev=TESTDIRS ;;
796 -tdir=* | --tdir=*)
797 TESTDIRS=$ac_optarg ;;
798
799 -skipdir | --skipdir | -skd | --skd)
800 ac_prev=SKIPDIRS ;;
801 -skipdir=* | --skipdir=*)
802 SKIPDIRS=$ac_optarg ;;
803
804 -bash | --bash | -b | --b)
805 ac_prev=BASH ;;
806 -bash=* | --bash=*)
807 BASH=$ac_optarg ;;
808
809 -command | --command | -c | --c)
810 ac_prev=COMMAND ;;
811 -command=* | --command=*)
812 COMMAND=$ac_optarg ;;
813
814 -make | --make | -m | --m)
815 ac_prev=MAKE ;;
816 -make=* | --make=*)
817 MAKE=$ac_optarg ;;
818
819 -odir | --odir)
820 ac_prev=OUTDIR ;;
821 -odir=* | --odir=*)
822 OUTDIR=$ac_optarg ;;
823
824 -ptracers | --ptracers | -ptr | --ptr)
825 ac_prev=PTRACERS_NUM ;;
826 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
827 PTRACERS_NUM=$ac_optarg ;;
828
829 -match | --match ) ac_prev=MATCH_CRIT ;;
830 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
831
832 -j) ac_prev=JOBS ;;
833 -j=*) JOBS=$ac_optarg ;;
834
835 -clean | --clean)
836 CLEANUP=t ; DELDIR=t ;;
837
838 -quick | --quick | -q | --q)
839 QUICK=t ;;
840 -nogenmake | --nogenmake | -ng | --ng)
841 NOGENMAKE=t ;;
842 -noclean | --noclean | -nc | --nc)
843 NOCLEAN=t ;;
844 -nodepend | --nodepend | -nd | --nd)
845 NODEPEND=t ;;
846
847 -postclean | --postclean | -pc | --pc)
848 POSTCLEAN=t ;;
849
850 -mpi) MPI=t ;;
851
852 -mth) MULTI_THREAD=t ;;
853
854 -adm | -ad) ADM=t ;;
855
856 -ieee) IEEE=true ;;
857 -noieee) IEEE= ;;
858
859 -verbose) verbose=2 ;;
860 -debug) debug=1 ;;
861 -quiet) verbose=0 ;;
862
863 -deldir | -dd) DELDIR=t ;;
864
865 -ts) TS=t;;
866
867 -papis) PAPIS=t;;
868
869 -pcls) PCL=t;;
870
871 -*)
872 echo "Error: unrecognized option: "$ac_option
873 usage
874 ;;
875
876 *)
877 echo "Error: unrecognized argument: "$ac_option
878 usage
879 ;;
880
881 esac
882
883 done
884
885 if test "x$QUICK" = xt ; then
886 NOGENMAKE=t
887 NOCLEAN=t
888 NODEPEND=t
889 fi
890
891 #- setting for forward or ADM testing
892 if test "x$ADM" = xt ; then
893 code_dir=code_ad
894 inputdir=input_ad
895 ref_outp="output_adm.txt"
896 EXECUTABLE="mitgcmuv_ad"
897 else
898 code_dir=code
899 inputdir=input
900 ref_outp="output.txt"
901 EXECUTABLE="mitgcmuv"
902 fi
903
904 if test "x$TESTDIRS" = x ; then
905 LIST=`scandirs results/$ref_outp`
906 else
907 #- expand group of experiments:
908 LIST=" "
909 for xx in $TESTDIRS
910 do
911 case $xx in
912 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
913 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
914 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
915 ;;
916 'tutorials')
917 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
918 *) LIST=${LIST}" "$xx ;;
919 esac
920 done
921 fi
922 #echo 'LIST='${LIST}'<'
923 #- skip dirs, remove duplicate and non-directory:
924 TESTDIRS=" "
925 count=0
926 for xx in $LIST
927 do
928 yy=`echo $SKIPDIRS | grep -c $xx`
929 if test $yy = 0 ; then
930 if test -d $xx ; then
931 yy=`echo $TESTDIRS | grep -c $xx`
932 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
933 else count=1 ;
934 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
935 fi
936 else
937 if test $count = 1 ; then echo -n ", \"$xx\""
938 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
939 fi
940 fi
941 done
942 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
943 #echo 'TESTDIRS='${TESTDIRS}'<'
944
945 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
946 OPTFILE=$MITGCM_OF
947 fi
948
949 OUTPUTFILE=$ref_outp
950 if test "x$COMMAND" = x ; then
951 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
952 fi
953 if test "x$MPI" = xt ; then
954 OUTPUTFILE="STDOUT.0000"
955 fi
956
957 echo "OK (COMMAND= $COMMAND )"
958
959 # set the Default List of output variables to be checked:
960 # (use default or load experiment-specific list from file "tr_checklist")
961 # content : 1rst = main variable used to decide if it pass or FAIL
962 # others = number of matching digits to be printed in summary.txt
963 if test "x$ADM" = x ; then
964 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
965 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
966 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
967 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
968 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
969 else
970 DEF_CHECK_LIST='Grad Cost Grad'
971 EMPTY_RESULTS='.. ..'
972 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
973 fi
974
975 # create the FORTRAN comparison code
976 createcodelet
977
978 # build the mpack utility
979 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
980 echo "skipping mpack build"
981 else
982 build_mpack
983 fi
984
985 # Create a uniquely named directory to store results
986 MACH=`hostname`
987 UNAMEA=`uname -a`
988 DATE=`date +%Y%m%d`
989 BASE="tr_"$MACH"_"$DATE"_"
990 if test "x$OUTDIR" != x ; then
991 BASE="tr_"$OUTDIR"_"$DATE"_"
992 fi
993 DNUM=0
994 DRESULTS="$BASE$DNUM"
995 while test -e $DRESULTS ; do
996 DNUM=$(( $DNUM + 1 ))
997 DRESULTS="$BASE$DNUM"
998 done
999 mkdir $DRESULTS
1000 RETVAL=$?
1001 if test "x$RETVAL" != x0 ; then
1002 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1003 exit 1
1004 fi
1005 SUMMARY="$DRESULTS/summary.txt"
1006 printf "Start time: " >> $SUMMARY
1007 start_date=`date`
1008 echo $start_date > $SUMMARY
1009
1010 of_path=
1011 if test "x$OPTFILE" != xNONE ; then
1012 if test -r $OPTFILE ; then
1013 # get the path
1014 path=${OPTFILE%/*}
1015 if test "x$path" = x ; then
1016 of_path=`pwd`
1017 else
1018 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1019 fi
1020 file=${OPTFILE##*/}
1021 OPTFILE=$of_path/$file
1022 cp $OPTFILE $DRESULTS
1023 echo >> $SUMMARY
1024 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1025 else
1026 echo | tee $SUMMARY
1027 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1028 exit 1
1029 fi
1030 else
1031 echo >> $SUMMARY
1032 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
1033 echo " so the genmake default will be used." >> $SUMMARY
1034 fi
1035 echo
1036 echo >> $SUMMARY
1037 if test "x$ADM" = x ; then
1038 if [ $MATCH_CRIT -lt 10 ] ;
1039 then line_0="default "$MATCH_CRIT ;
1040 else line_0="default "$MATCH_CRIT ; fi
1041 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1042 # line_0=" ----T----- ----S----- ----U----- ----V-----"
1043 line_1="G D M c m s m s m s m s"
1044 line_2="E p a R g m m e . m m e . m m e . m m e ."
1045 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
1046 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1047 for ii in $PTRACERS_NUM ; do
1048 # tst=`eval 'echo $HAVE_PTR0'$ii`
1049 # if test "x$tst" = xt ; then
1050 line_0="$line_0 --PTR 0"$ii"--"
1051 line_1="$line_1 m s"
1052 line_2="$line_2 m m e ."
1053 line_3="$line_3 i a a d"
1054 line_4="$line_4 n x n ."
1055 # fi
1056 done
1057 echo "$line_0" | tee -a $SUMMARY
1058 echo "$line_1" | tee -a $SUMMARY
1059 echo "$line_2" | tee -a $SUMMARY
1060 echo "$line_3" | tee -a $SUMMARY
1061 echo "$line_4" | tee -a $SUMMARY
1062 echo " " | tee -a $SUMMARY
1063 else
1064 echo "ADJOINT=true" >> $SUMMARY
1065 echo >> $SUMMARY
1066 if [ $MATCH_CRIT -lt 10 ] ;
1067 then line_0="default "$MATCH_CRIT ;
1068 else line_0="default "$MATCH_CRIT ; fi
1069 echo "$line_0" | tee -a $SUMMARY
1070 cat << EOF | tee -a $SUMMARY
1071 G D M C G
1072 E p a R o r
1073 N n k u s a
1074 2 d e n t d
1075
1076 EOF
1077 fi
1078
1079 # ...and each test directory...
1080 for dir in $TESTDIRS ; do
1081
1082 # set builddir & rundir:
1083 builddir="build"
1084 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1085 rundir="run"
1086 if test ! -d $dir/$rundir ; then
1087 rundir=$builddir
1088 fi
1089 CODE_DIR=$dir/$code_dir
1090 BUILD_DIR=$dir/$builddir
1091
1092 # Cleanup only!
1093 if test "x$CLEANUP" = xt ; then
1094 if test -r $BUILD_DIR/Makefile ; then
1095 echo ' ------ clean dir:' $dir/build
1096 ( cd $BUILD_DIR ; make CLEAN )
1097 fi
1098 if test -d $dir/$rundir/CVS ; then
1099 echo ' ------ clean dir:' $dir/$rundir
1100 run_clean $dir/$rundir
1101 fi
1102 (
1103 cd $dir
1104 rm -rf tr_run.*
1105 )
1106 continue
1107 fi
1108
1109 # Verify that the testdir exists and contains previous
1110 # results in the correct location--or skip this directory!
1111 fout=$dir"/results/"$ref_outp
1112 if test ! -r $fout ; then
1113 echo "can't read \"$fout\" -- skipping $dir"
1114 continue
1115 fi
1116 if test "x$ADM" = x ; then
1117 check_for_add_mon_output $fout
1118 fi
1119
1120 # Check for additional types of monitor output
1121
1122 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
1123 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1124 continue
1125 fi
1126 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1127 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1128 continue
1129 fi
1130
1131 # Check whether there are "extra runs" for this testdir
1132 extra_runs=
1133 ex_run_dirs=`( cd $dir ; echo $inputdir.* )`
1134 #echo "ex_run_dirs='$ex_run_dirs'"
1135 for exd in $ex_run_dirs ; do
1136 name=`echo $exd | sed -e "s/$inputdir\.//"`
1137 refExOut=`echo $ref_outp | sed "s/\./.${name}./"`
1138 outf="$dir/results/$refExOut"
1139 if test -f $outf -a -r $outf ; then
1140 if test "x$MULTI_THREAD" = "xt" ; then
1141 if test -r $dir"/"$exd"/eedata.mth" ; then
1142 extra_runs="$extra_runs $name"
1143 #else echo $dir"/"$exd"/eedata.mth: not found"
1144 fi
1145 else
1146 extra_runs="$extra_runs $name"
1147 fi
1148 fi
1149 done
1150
1151 echo "-------------------------------------------------------------------------------"
1152 echo
1153 if test "x$extra_runs" = "x" ; then
1154 echo "Experiment: $dir"
1155 else
1156 echo "Experiment: $dir ; extra_runs=$extra_runs"
1157 fi
1158 echo
1159 unset genmake makedepend make run
1160 results=$EMPTY_RESULTS
1161
1162 # Create an output dir for each OPTFILE/tdir combination
1163 rel_CDIR=$DRESULTS"/"$dir
1164 mkdir $rel_CDIR
1165 CDIR=`pwd`"/$rel_CDIR"
1166
1167 if test "x$CLEANUP" = xt ; then
1168 echo '====>>> this is to check that we never go through this part <<< ==='
1169 makeclean $dir/$builddir \
1170 && run_clean $dir/$rundir
1171 else
1172 genmakemodel $dir/$builddir && genmake=Y \
1173 && makeclean $dir/$builddir \
1174 && run_clean $dir/$rundir \
1175 && symlink_mpifiles $dir $code_dir $builddir \
1176 && makedependmodel $dir/$builddir && makedepend=Y \
1177 && makemodel $dir/$builddir && make=Y \
1178 && linkdata $dir/$rundir $inputdir input \
1179 && runmodel $dir/$rundir && run=Y \
1180 && results=`testoutput_run $dir $rundir $ref_outp`
1181 fi
1182
1183 echo
1184 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1185 echo
1186 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1187 touch $CDIR"/summary.txt"
1188 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1189 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1190 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1191 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1192 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1193 if test "x$ADM" = xt ; then
1194 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1195 grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \
1196 >> $CDIR"/summary.txt"
1197 fi
1198
1199 for ex in $extra_runs ; do
1200 unset run
1201 results=$EMPTY_RESULTS
1202 # reference output file
1203 refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"`
1204 # Create an output dir for each OPTFILE/tdir.ex combination
1205 rel_CDIR=$DRESULTS"/"$dir"."$ex
1206 mkdir $rel_CDIR
1207 CDIR=`pwd`"/$rel_CDIR"
1208 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
1209 run_clean $dir/tr_run.$ex
1210 linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input
1211 runmodel $dir/tr_run.$ex && run=Y \
1212 && results=`testoutput_run $dir tr_run.$ex $refExOut`
1213 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1214 fres="$fres.$ex"
1215 echo
1216 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1217 touch $CDIR"/summary.txt"
1218 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1219 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1220 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1221 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1222 echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt"
1223 if test "x$ADM" = xt ; then
1224 head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt"
1225 grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \
1226 >> $CDIR"/summary.txt"
1227 fi
1228 if test "x$POSTCLEAN" = xt ; then
1229 run_clean $dir/tr_run.$ex
1230 fi
1231 done
1232
1233 #postclean $dir/$builddir
1234 if test "x$POSTCLEAN" = xt ; then
1235 makeclean $dir/$builddir \
1236 && run_clean $dir/$rundir
1237 fi
1238
1239 echo "-------------------------------------------------------------------------------"
1240
1241 done
1242
1243 printf "Start time: " >> $SUMMARY
1244 echo $start_date >> $SUMMARY
1245 printf "End time: " >> $SUMMARY
1246 date >> $SUMMARY
1247
1248 # If addresses were supplied and mpack built successfully, then try
1249 # to send email using mpack.
1250 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1251 echo "No results email was sent."
1252 else
1253 if test "x$HAVE_MPACK" = xt ; then
1254 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1255 && gzip $DRESULTS".tar" \
1256 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1257 RETVAL=$?
1258 if test "x$RETVAL" != x0 ; then
1259 echo
1260 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1261 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1262 echo " summary of results from the directory \"$DRESULTS\"."
1263 echo
1264 else
1265 echo
1266 echo "An email containing results was sent to the following addresses:"
1267 echo " \"$ADDRESSES\""
1268 echo
1269 fi
1270 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1271 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1272 fi
1273 fi
1274
1275 rm -f tr_cmpnum.c tr_cmpnum
1276
1277 if test "x$CLEANUP" != xt ; then
1278 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'
1279 if test -e tr_out.txt ; then
1280 mv tr_out.txt tr_out.txt.old
1281 fi
1282 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt
1283 fi
1284
1285 if test "x$DELDIR" = xt ; then
1286 rm -rf $DRESULTS
1287 fi

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