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Revision 1.101 - (show annotations) (download)
Thu Sep 20 02:46:11 2007 UTC (16 years, 6 months ago) by jmc
Branch: MAIN
Changes since 1.100: +21 -3 lines
add option to test monitor output of Qnet, SeaIce Area & Heff (min,max,av,StD)
 and thSIce mean Area & Thick (Glob,N-H,S-H).

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.100 2007/09/17 15:35:46 jmc Exp $
4 # $Name: $
5 #
6
7 usage()
8 {
9 echo
10 echo "Usage: $0 [OPTIONS]"
11 echo
12 echo "where possible OPTIONS are:"
13 echo " (-help|-h) print usage"
14 echo " (-mth) run multi threaded (using eedata.mth)"
15 echo " (-mpi) compile and run using MPI"
16 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
17 echo " (DEF=\"-ieee\")"
18 echo " (-of=|-optfile=)STRING list of optfiles to use"
19 echo " (-a|-addr) STRING list of email recipients"
20 echo " (DEF=\"edhill@mitgcm.org\")"
21 echo " (-t|-tdir) STRING list of group and/or exp. dirs to test"
22 echo " (recognized groups: basic, tutorials)"
23 echo " (DEF=\"\" which test all)"
24 echo " (-skd|-skipdir) STRING list of exp. dirs to skip"
25 echo " (DEF=\"\" which test all)"
26 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
27 echo " Bourne-compatible \"sh\" shell"
28 echo " (DEF=\"\" for \"bash\")"
29 echo " (-adm|-ad) perform an adjoint run"
30 echo " (-command) STRING command to run"
31 echo " (DEF=\"make output.txt\")"
32 echo " (-m|-make) STRING command to use for \"make\""
33 echo " (DEF=\"make\")"
34 echo " (-odir) STRING used to build output directory name"
35 echo " (DEF=\"hostname\")"
36 echo " (-ptr|-ptracers) STRING specify which ptracers to test"
37 echo " (DEF=\"1 2 3 4 5\")"
38 echo " (-match) NUMBER Matching Criteria (number of digits)"
39 echo " (DEF=\"12\")"
40 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
41 echo " (-clean) *ONLY* run \"make CLEAN\""
42 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
43 echo " (-nogenmake|-ng) skip the genmake stage"
44 echo " (-noclean|-nc) skip the \"make clean\" stage"
45 echo " (-nodepend|-nd) skip the \"make depend\" stage"
46 echo " (-deldir|-dd) on success, delete the output directory"
47 echo " (-ts) provide timing information per timestep"
48 echo " (-papis) provide MFlop/s per timestep using PAPI"
49 echo " (-pcls) provide MFlop/s per timestep using PCL"
50 echo
51 echo "and where STRING can be a whitespace-delimited list"
52 echo "such as:"
53 echo
54 echo " -t 'exp0 exp2 exp3' "
55 echo " -addr='abc@123.com testing@home.org'"
56 echo
57 echo "provided that the expression is properly quoted within the current"
58 echo "shell (note the use of single quotes to protect white space)."
59 echo
60 exit 1
61 }
62
63 # build the mpack utility
64 build_mpack()
65 {
66 printf "building the mpack utility... "
67 if test ! -x "$MPACKDIR/mpack" ; then
68 if test ! -d $MPACKDIR ; then
69 echo
70 echo "Error: can't find \"$MPACKDIR\""
71 echo " are you sure this program is being run in the correct "
72 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
73 echo
74 HAVE_MPACK=f
75 fi
76 printf "building mpack... "
77 if test "x$CC" = x ; then
78 export CC=cc
79 fi
80 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
81 RETVAL=$?
82 if test "x$RETVAL" != x0 ; then
83 echo
84 echo "Error building the mpack tools at: $MPACK_DIR"
85 echo
86 HAVE_MPACK=f
87 else
88 rm -f tr_build_mpack.out
89 HAVE_MPACK=t
90 fi
91 else
92 HAVE_MPACK=t
93 fi
94 echo "OK"
95 }
96
97 testoutput_var()
98 {
99 # testoutput_var dir s1 label subdir reference_output
100 #
101 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
102 # with same output from reference file $dir/results/$reference_output
103 # using search strings s1 and text label
104
105 if [ $debug -gt 0 ]; then
106 echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2
107 fi
108 if [ -r $1/$4/$OUTPUTFILE ]; then
109 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt
110 lncntA=`wc -l tmp1.txt | awk '{print $1}' `
111 if [ $lncntA -lt 2 ]; then
112 if [ $verbose -gt 0 ]; then
113 echo Not enough lines of output when searching for "$2" 1>&2
114 fi
115 return 99
116 fi
117 else
118 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
119 return 99
120 fi
121 if [ $debug -gt 0 ]; then
122 echo testoutput_var: grep "$2" $1/results/$5 1>&2
123 fi
124 grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt
125 lncntB=`wc -l tmp2.txt | awk '{print $1}' `
126 if [ $lncntB -lt 2 ]; then
127 if [ $verbose -gt 0 ]; then
128 echo Not enough lines of output when searching for "$2" 1>&2
129 fi
130 return 99
131 fi
132 if [ $lncntA -ne $lncntB ]; then
133 if [ $verbose -gt 0 ]; then
134 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
135 fi
136 return 99
137 fi
138 has_nan=`cat tmp1.txt | grep -i nan | wc -l`
139 if [ $has_nan -gt 0 ] ; then
140 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
141 return 99
142 fi
143 has_inf=`cat tmp1.txt | grep -i inf | wc -l`
144 if [ $has_inf -gt 0 ] ; then
145 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
146 return 99
147 fi
148 if [ $debug -gt 0 ]; then
149 echo testoutput_var: join tmp1.txt tmp2.txt 1>&2
150 fi
151 join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
152 if [ $debug -gt 0 ]; then
153 echo testoutput_var: compare_lines 1>&2
154 fi
155 if [ $verbose -gt 1 ]; then
156 cat tmp3.txt 1>&2
157 fi
158 echo "-1" >> tmp3.txt
159 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
160 cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
161 digits_of_similarity=`./tr_cmpnum < tmp4.txt`
162 if [ $digits_of_similarity -eq 99 ]; then
163 if [ $verbose -gt 0 ]; then
164 echo testoutput_var: No comparison was available for \"$3\" 1>&2
165 fi
166 digits_of_similarity=99
167 else
168 if [ $verbose -gt 0 ]; then
169 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
170 fi
171 fi
172 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
173
174 return $digits_of_similarity
175 }
176
177 dashnum()
178 {
179 # dashnum n1 n2 n3 ...
180 #
181 # print numbers using %3i format or "--" if number = 99
182
183 for num in $@ ; do
184 if [ $num = 99 ]; then
185 printf ' --'
186 else
187 printf '%3i' $num
188 fi
189 done
190 }
191
192 testoutput_ad()
193 {
194 grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $5}' > t05.txt
195 grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $5}' > t15.txt
196 grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $6}' > t06.txt
197 grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $6}' > t16.txt
198 join t05.txt t15.txt > t5.txt
199 join t06.txt t16.txt > t6.txt
200 echo "-1" >> t5.txt
201 echo "-1" >> t6.txt
202 digits_5=`./tr_cmpnum < t5.txt`
203 digits_6=`./tr_cmpnum < t6.txt`
204 dashnum $digits_5 $digits_6
205 rm -f t[01][56].txt t[56].txt
206 }
207
208 check_for_add_mon_output()
209 {
210 # Check for additional types of monitor output
211 if test "x$1" = x ; then
212 return
213 fi
214
215 for ii in $PTRACERS_NUM ; do
216 eval "HAVE_PTR0"$ii"=f"
217 done
218
219 ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max"
220 ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
221 for ii in $PTRACERS_NUM ; do
222 for jj in $ptr_add ; do
223 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
224 tst=`grep $name $1 | wc -l | awk '{print $1}'`
225 if test ! "x$tst" = x0 ; then
226 eval "HAVE_PTR0"$ii"=t"
227 fi
228 done
229 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"'
230 done
231 }
232
233 testoutput_run()
234 {
235 # testoutput_run directory subdir reference_output
236 #
237 # test output from 1 run in "directory"
238 # if test "x$ADM" = x ; then
239 # default list of output variables to be checked:
240 # 1rst : main variable used to decide if it pass or FAIL
241 # others : number of matching digits to be printed in summary.txt
242 listChk=$DEF_CHECK_LIST
243 # load experiment-specific list from file "tr_checklist" (if it exist)
244 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
245 sVar=`echo $listChk | awk '{print $1}'`
246 # remove 1rst var and expand the list: + => min max mean s.d
247 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
248 | sed 's/+//g' | sed "s/^$sVar//"`
249 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi
250 for ii in 1 2 3 4 5 6 7 8 9 ; do
251 tst=`eval 'echo "$HAVE_PTR0'$ii'"'`
252 #echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
253 if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi
254 done
255 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'`
256 if test $tst != 1 ; then
257 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
258 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
259 echo "==> WARNING: in checked list:" $listVar 1>&2
260 #- put it back once:
261 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
262 fi
263 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi
264 echo "listVar='$listVar'" > $CDIR"/summary.txt"
265 allargs=""
266 for xx in $listVar
267 do
268 case $xx in
269 'PS') if [ $debug -gt 0 ]
270 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
271 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$?
272 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
273 'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;;
274 'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;;
275 'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;;
276 'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;;
277 'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;;
278 'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;;
279 'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;;
280 'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;;
281 'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;;
282 'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;;
283 'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;;
284 'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;;
285 'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;;
286 'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;;
287 'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;;
288 'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;;
289 'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;;
290 'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;;
291 'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
292 testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;;
293 'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
294 testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;;
295 'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
296 testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;;
297 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'`
298 testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;;
299 'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;;
300 'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;;
301 'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;;
302 'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;;
303 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;;
304 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;;
305 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;;
306 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;;
307 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;;
308 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;;
309 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;;
310 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;;
311 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;;
312 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;;
313 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;;
314 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;;
315 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;;
316 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;;
317 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
318 esac
319 if test $xx = $sVar
320 then allargs="$allargs > $yy <"
321 else allargs="$allargs $yy"
322 fi
323 done
324
325 nbVar=`echo $listVar | awk '{print NF}'`
326 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
327 #-- fill line (up to standard length) with dot:
328 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
329 echo $allargs $adNul
330 else
331 echo $allargs
332 fi
333
334 # else
335 # testoutput_ad $1 $2 "precision_grdchk_result"
336 # fi
337 }
338
339 genmakemodel()
340 {
341 # genmakemodel directory
342 if test "x$NOGENMAKE" = xt ; then
343 echo "genmake skipped!"
344 else
345 if test "x$BASH" = x ; then
346 GENMAKE2="../../../tools/genmake2"
347 else
348 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
349 fi
350 (
351 cd $1;
352 command="$GENMAKE2 -ds -m $MAKE"
353 if test "x$ADM" = x ; then
354 command="$command --mods=../code"
355 else
356 command="$command --mods=../code_ad"
357 fi
358 if test "x$OPTFILE" != xNONE ; then
359 command="$command --optfile=$OPTFILE"
360 fi
361 if test "x$IEEE" != x ; then
362 command="$command -ieee"
363 fi
364 if test "x$MPI" = xt ; then
365 command="$command -mpi"
366 fi
367 if test "x$TS" = xt ; then
368 command="$command -ts"
369 fi
370 if test "x$PAPIS" = xt ; then
371 command="$command -papis"
372 else
373 if test "x$PCLS" = xt ; then
374 command="$command -pcls"
375 fi
376 fi
377 printf 'genmake ... ' 1>&2
378 $command > make.log 2>&1
379 RETVAL=$?
380 # Reduce the size of the testing emails!
381 head -100 Makefile > $CDIR/Makefile_head
382 if test "x$RETVAL" != x0 ; then
383 tail make.log
384 echo "genmakemodel: genmake failed" 1>&2
385 cp genmake_* make.log $CDIR
386 return 1
387 else
388 echo "successful" 1>&2
389 fi
390 )
391 fi
392 }
393
394 makeclean()
395 {
396 # makeclean directory
397 if test "x$NOCLEAN" = xt ; then
398 echo "make Clean skipped!"
399 else
400 (
401 cd $1;
402 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
403 if test -r Makefile ; then
404 printf 'clean build-dir: make Clean ... ' 2>&1
405 $MAKE Clean >> make.log 2>&1
406 RETVAL=$?
407 if test "x$RETVAL" != x0 ; then
408 tail make.log
409 echo "makeclean: \"make Clean\" failed" 1>&2
410 cp make.log $CDIR"/make.log"
411 return 1
412 fi
413 fi
414 echo successful 1>&2
415 exit 0
416 )
417 fi
418 }
419
420 run_clean()
421 {
422 # run_clean directory
423 if test "x$NOCLEAN" = xt ; then
424 echo "run_clean skipped!"
425 else
426 (
427 cd $1;
428 printf 'clean run-dir ... ' 2>&1
429 # part of what is done after "make clean" when doing "make CLEAN"
430 find . -name "*.meta" -exec rm {} \;
431 find . -name "*.data" -exec rm {} \;
432 find . -name "fort.*" -exec rm {} \;
433 find . -type l -exec rm {} \;
434 rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime
435 rm -rf mnc_test_*
436 echo successful 1>&2
437 exit 0
438 )
439 fi
440 }
441
442 makedependmodel()
443 {
444 # makedependmodel directory
445 if test "x$NODEPEND" = xt ; then
446 echo "make depend skipped!"
447 else
448 (
449 cd $1;
450 printf 'make depend ... ' 1>&2
451 $MAKE depend >> make.log 2>&1
452 RETVAL=$?
453 if test "x$RETVAL" != x0 ; then
454 tail make.log
455 echo "makedependmodel: make depend failed" 1>&2
456 cp make.log $CDIR"/make.log"
457 return 1
458 else
459 echo successful 1>&2
460 fi
461 )
462 fi
463 }
464
465 makemodel()
466 {
467 # makemodel directory
468 (
469 cd $1;
470 if test -r Makefile ; then
471 printf 'make ... ' 1>&2
472 if test "x$ADM" = x ; then
473 if test "x$JOBS" = x ; then
474 $MAKE >> make.log 2>&1
475 else
476 $MAKE -j $JOBS >> make.log 2>&1
477 fi
478 else
479 $MAKE adall >> make.log 2>&1
480 fi
481 RETVAL=$?
482 if test "x$RETVAL" != x0 ; then
483 tail make.log
484 echo failed 1>&2
485 cp make.log $CDIR"/make.log"
486 return 1
487 else
488 echo successful 1>&2
489 fi
490 fi
491 )
492 }
493
494 symlink_mpifiles()
495 {
496 # Put special links so that MPI specific files are used
497 # This MUST be invoked between makeclean and makelinks because
498 # the Makefile will link to non-mpi files by default
499
500 dir=$1
501 code_dir=$2
502 BUILD_DIR=$dir/$3
503 CODE_DIR=$dir/$code_dir
504
505 # These are files that should replace their counter-part when using -mpi
506 MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
507
508 # Is this an MPI run?
509 if test "x$MPI" = xt ; then
510 # YES: We symbolically link these files to the build
511 # dir so long as there is no real file in place
512 for ii in $MPI_FILES ; do
513 i=`echo $ii | sed 's:^\./::'`
514 name=`echo $i | sed 's:_mpi::' `
515 cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
516 RETVAL=$?
517 if test "x$RETVAL" != x0 ; then
518 if ! test -f $BUILD_DIR/$i ; then
519 #echo Linking $name to $i
520 (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
521 fi
522 fi
523 done
524 else
525 # NO: We undo any _mpi symbolically linked files
526 for ii in $MPI_FILES ; do
527 i=`echo $ii | sed 's:^\./::'`
528 name=`echo $i | sed 's:_mpi::' `
529 if test -L $BUILD_DIR/$name ; then
530 cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1
531 RETVAL=$?
532 if test "x$RETVAL" = x0 ; then
533 #echo Un-linking $name from $linktarg
534 rm -f $BUILD_DIR/$name
535 fi
536 fi
537 done
538 fi
539
540 }
541
542 linkdata()
543 {
544 # linkdata run_dir input_dir_1 input_dir_2 ...
545 #
546 # symbolically link data files to run directory
547 if test -d $1 ; then
548 (
549 cd $1 ; shift
550 if test -r "../"$1"/eedata.mth" ; then
551 # found eedata.mth in 1rst input dir and it is readable
552 if test "x$MULTI_THREAD" = "xt" ; then
553 # multi-threaded test: remove symbolic link & link eedata.mth
554 if test -h eedata ; then rm -f eedata ; fi
555 if test ! -r eedata ; then
556 ln -sf "../"$1"/eedata.mth" eedata ;
557 printf 'eedata.mth ' 1>&2
558 fi
559 else
560 # not multi-threaded test: remove eedata symbolic link
561 if test -h eedata ; then rm -f eedata ; fi
562 fi
563 fi
564 for ldir in $* ; do
565 if test -d "../"$ldir ; then
566 printf 'ldir='${ldir} 1>&2
567 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
568 for i in $files ; do
569 if test ! -d "../"$ldir/$i ; then
570 if test ! -r $i ; then
571 printf ' '$i 1>&2
572 ln -sf "../"$ldir"/"$i $i
573 fi
574 fi
575 done
576 if test -x "../"$ldir"/"prepare_run ; then
577 "../"$ldir"/"prepare_run
578 fi
579 printf ' ; ' 1>&2
580 fi
581 done
582 )
583 fi
584 }
585
586 runmodel()
587 {
588 # runmodel directory
589 #
590 # runs "$COMMAND in "directory"
591 # (where "$COMMAND" is relative to "directory")
592 (
593 cd $1
594 printf 'runmodel in %s ...' $1 1>&2
595 # make output.txt
596 echo
597 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
598 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00
599 ln -sf "../"$builddir"/"$EXECUTABLE .
600 fi
601 if test ! -x $EXECUTABLE ; then
602 rm -f run.log ; touch run.log
603 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
604 echo " no executable:" $EXECUTABLE >> run.log
605 RETVAL=8
606 ENDVAL=-1
607 else
608 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
609 # output do not exist or is older than executable:
610 rm -f run.log ; touch run.log
611 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
612 ( eval $COMMAND ) >> run.log 2>&1
613 RETVAL=$?
614 else
615 RETVAL=0
616 if test -f run.log ; then
617 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
618 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
619 else
620 touch run.log
621 if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi
622 echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1
623 echo " no previous run.log: assume NORMAL END" >> run.log 2>&1
624 fi
625 fi
626 ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'`
627 fi
628 rm -f run.log_00
629 #if test "x$RETVAL" = x0 ; then
630 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
631 tail run.log
632 echo successful 1>&2
633 # === Reduce the size of the testing emails!
634 #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE
635 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
636 return 0
637 else
638 tail run.log
639 echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2
640 cp run.log $CDIR"/run.log"
641 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
642 return 1
643 fi
644 )
645 }
646
647 createcodelet()
648 {
649 # create codelet for comparing model output
650
651 printf "creating the comparison code... "
652 cat > tr_cmpnum.c <<EOF
653 #include <stdio.h>
654 #include <math.h>
655 int main( int argc, char** argv ) {
656 int linnum,cmplin,best,lncnt;
657 double a,b,abave,relerr;
658 best = -22;
659 lncnt = 0;
660 while( 1 & ( (lncnt+=1) < 999 ) ) {
661 scanf("%d", &linnum);
662 if (linnum == -1) break;
663 scanf("%lf", &a); scanf("%lf", &b);
664 abave = 0.5*(fabs(a)+fabs(b));
665 if ( abave == abave ) {
666 if (abave > 0.0) {
667 relerr=fabs(a-b)/abave;
668 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
669 else { cmplin = -16 ; }
670 best = (best > cmplin) ? best : cmplin; }
671 else { cmplin = -22 ; }
672 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
673 }
674 else {
675 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
676 break; }
677 }
678 if (lncnt == 999) best=-29;
679 if (linnum != -1) best=-99;
680 printf("%d\n", -best);
681 return 0;
682 }
683 EOF
684 $CC -o tr_cmpnum tr_cmpnum.c -lm
685
686 if [ -x ./tr_cmpnum ]; then
687 echo "OK"
688 return 0
689 else
690 echo
691 echo "ERROR: failed to compile comparison code -- please specify"
692 echo " a C compiler using the CC environment variable."
693 exit 1
694 fi
695 }
696
697 formatresults()
698 {
699 # formatresults expt genmake depend make run results*
700
701 nm=$1
702 printf '%s %s %s %s' $2 $3 $4 $5
703 shift; shift; shift; shift; shift;
704 listPrt=$@
705 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
706 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
707 printf '%3s' $listPrt
708 # line below does not work on hp-ux_ia64 : do those substitutions later on
709 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
710
711 if [ $xx = '..' ]; then
712 printf ' N/O '
713 elif [ $xx = '--' ]; then
714 printf ' N/O '
715 elif [ $xx = 99 ]; then
716 printf ' N/O '
717 else
718 if [ $xx -ge $MATCH_CRIT ]; then
719 printf ' pass'
720 else
721 printf ' FAIL'
722 fi
723 fi
724 printf ' %s' $nm
725 printf '\n'
726
727 }
728
729 scandirs()
730 {
731 if [ $# -eq 1 ]; then
732 for arg in * ; do
733 test -f $arg/$1 && echo $arg
734 done
735 else
736 echo $*
737 fi
738 }
739
740
741 ###############################################################################
742
743
744 # Default properties
745 debug=0
746 verbose=1
747 clean=0
748 expts=''
749 # ieee=1
750
751 IEEE=true
752 if test "x$MITGCM_IEEE" != x ; then
753 IEEE=$MITGCM_IEEE
754 fi
755
756
757 CLEANUP=f
758 QUICK=f
759 NOGENMAKE=f
760 NOCLEAN=f
761 NODEPEND=f
762 POSTCLEAN=f
763
764 BASH=
765 OPTFILE=NONE
766 ADDRESSES=
767 TESTDIRS=
768 SKIPDIRS=
769 MPACKDIR="../tools/mpack-1.6"
770 HAVE_MPACK=
771 MPACK="$MPACKDIR/mpack"
772 COMMAND=
773 if test "x$MAKE" = x ; then
774 MAKE=make
775 fi
776 if test "x$CC" = x ; then
777 CC=cc
778 fi
779 JOBS=
780 MPI=f
781 MULTI_THREAD=f
782 OUTDIR=
783 DELDIR=
784
785 ADM=
786
787 # Additional monitor types
788 PTRACERS_NUM="1 2 3 4 5"
789
790 MATCH_CRIT=13
791
792 printf "parsing options... "
793
794 ac_prev=
795 for ac_option ; do
796
797 # If the previous option needs an argument, assign it.
798 if test -n "$ac_prev"; then
799 eval "$ac_prev=\$ac_option"
800 ac_prev=
801 continue
802 fi
803
804 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
805
806 case $ac_option in
807
808 -help | --help | -h | --h)
809 usage ;;
810
811 -optfile | --optfile | -of | --of)
812 ac_prev=OPTFILE ;;
813 -optfile=* | --optfile=* | -of=* | --of=*)
814 OPTFILE=$ac_optarg ;;
815
816 -addr | --addr | -a | --a)
817 ac_prev=ADDRESSES ;;
818 -addr=* | --addr=*)
819 ADDRESSES=$ac_optarg ;;
820
821 -tdir | --tdir | -t | --t)
822 ac_prev=TESTDIRS ;;
823 -tdir=* | --tdir=*)
824 TESTDIRS=$ac_optarg ;;
825
826 -skipdir | --skipdir | -skd | --skd)
827 ac_prev=SKIPDIRS ;;
828 -skipdir=* | --skipdir=*)
829 SKIPDIRS=$ac_optarg ;;
830
831 -bash | --bash | -b | --b)
832 ac_prev=BASH ;;
833 -bash=* | --bash=*)
834 BASH=$ac_optarg ;;
835
836 -command | --command | -c | --c)
837 ac_prev=COMMAND ;;
838 -command=* | --command=*)
839 COMMAND=$ac_optarg ;;
840
841 -make | --make | -m | --m)
842 ac_prev=MAKE ;;
843 -make=* | --make=*)
844 MAKE=$ac_optarg ;;
845
846 -odir | --odir)
847 ac_prev=OUTDIR ;;
848 -odir=* | --odir=*)
849 OUTDIR=$ac_optarg ;;
850
851 -ptracers | --ptracers | -ptr | --ptr)
852 ac_prev=PTRACERS_NUM ;;
853 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*)
854 PTRACERS_NUM=$ac_optarg ;;
855
856 -match | --match ) ac_prev=MATCH_CRIT ;;
857 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
858
859 -j) ac_prev=JOBS ;;
860 -j=*) JOBS=$ac_optarg ;;
861
862 -clean | --clean)
863 CLEANUP=t ; DELDIR=t ;;
864
865 -quick | --quick | -q | --q)
866 QUICK=t ;;
867 -nogenmake | --nogenmake | -ng | --ng)
868 NOGENMAKE=t ;;
869 -noclean | --noclean | -nc | --nc)
870 NOCLEAN=t ;;
871 -nodepend | --nodepend | -nd | --nd)
872 NODEPEND=t ;;
873
874 -postclean | --postclean | -pc | --pc)
875 POSTCLEAN=t ;;
876
877 -mpi) MPI=t ;;
878
879 -mth) MULTI_THREAD=t ;;
880
881 -adm | -ad) ADM=t ;;
882
883 -ieee) IEEE=true ;;
884 -noieee) IEEE= ;;
885
886 -verbose) verbose=2 ;;
887 -debug) debug=1 ;;
888 -quiet) verbose=0 ;;
889
890 -deldir | -dd) DELDIR=t ;;
891
892 -ts) TS=t;;
893
894 -papis) PAPIS=t;;
895
896 -pcls) PCL=t;;
897
898 -*)
899 echo "Error: unrecognized option: "$ac_option
900 usage
901 ;;
902
903 *)
904 echo "Error: unrecognized argument: "$ac_option
905 usage
906 ;;
907
908 esac
909
910 done
911
912 if test "x$QUICK" = xt ; then
913 NOGENMAKE=t
914 NOCLEAN=t
915 NODEPEND=t
916 fi
917
918 #- setting for forward or ADM testing
919 if test "x$ADM" = xt ; then
920 code_dir=code_ad
921 input_dirs='input_ad input'
922 ref_outp="output_adm.txt"
923 EXECUTABLE="mitgcmuv_ad"
924 else
925 code_dir=code
926 input_dirs='input'
927 ref_outp="output.txt"
928 EXECUTABLE="mitgcmuv"
929 fi
930
931 if test "x$TESTDIRS" = x ; then
932 # if test "x$ADM" = xt ; then
933 # LIST=`scandirs results_ad/$ref_outp`
934 # else
935 LIST=`scandirs results/$ref_outp`
936 # fi
937 else
938 #- expand group of experiments:
939 LIST=" "
940 for xx in $TESTDIRS
941 do
942 case $xx in
943 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
944 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
945 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
946 ;;
947 'tutorials')
948 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
949 *) LIST=${LIST}" "$xx ;;
950 esac
951 done
952 fi
953 #echo 'LIST='${LIST}'<'
954 #- skip dirs, remove duplicate and non-directory:
955 TESTDIRS=" "
956 count=0
957 for xx in $LIST
958 do
959 yy=`echo $SKIPDIRS | grep -c $xx`
960 if test $yy = 0 ; then
961 if test -d $xx ; then
962 yy=`echo $TESTDIRS | grep -c $xx`
963 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
964 else count=1 ;
965 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
966 fi
967 else
968 if test $count = 1 ; then echo -n ", \"$xx\""
969 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
970 fi
971 fi
972 done
973 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
974 #echo 'TESTDIRS='${TESTDIRS}'<'
975
976 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
977 OPTFILE=$MITGCM_OF
978 fi
979
980 OUTPUTFILE=$ref_outp
981 if test "x$COMMAND" = x ; then
982 COMMAND="./$EXECUTABLE > $OUTPUTFILE"
983 fi
984 if test "x$MPI" = xt ; then
985 OUTPUTFILE="STDOUT.0000"
986 fi
987
988 #echo "OK"
989 echo "OK (COMMAND= $COMMAND )"
990
991 # set the Default List of output variables to be checked:
992 # (use default or load experiment-specific list from file "tr_checklist")
993 # content : 1rst = main variable used to decide if it pass or FAIL
994 # others = number of matching digits to be printed in summary.txt
995 if test "x$ADM" = x ; then
996 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
997 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
998 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
999 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
1000 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
1001 else
1002 DEF_CHECK_LIST='Cost Cost Grad'
1003 EMPTY_RESULTS='.. ..'
1004 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
1005 fi
1006
1007 # create the FORTRAN comparison code
1008 createcodelet
1009
1010 # build the mpack utility
1011 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1012 echo "skipping mpack build"
1013 else
1014 build_mpack
1015 fi
1016
1017 # Create a uniquely named directory to store results
1018 MACH=`hostname`
1019 UNAMEA=`uname -a`
1020 DATE=`date +%Y%m%d`
1021 BASE="tr_"$MACH"_"$DATE"_"
1022 if test "x$OUTDIR" != x ; then
1023 BASE="tr_"$OUTDIR"_"$DATE"_"
1024 fi
1025 DNUM=0
1026 DRESULTS="$BASE$DNUM"
1027 while test -e $DRESULTS ; do
1028 DNUM=$(( $DNUM + 1 ))
1029 DRESULTS="$BASE$DNUM"
1030 done
1031 mkdir $DRESULTS
1032 RETVAL=$?
1033 if test "x$RETVAL" != x0 ; then
1034 echo "ERROR: Can't create results directory \"./$DRESULTS\""
1035 exit 1
1036 fi
1037 SUMMARY="$DRESULTS/summary.txt"
1038 printf "Start time: " >> $SUMMARY
1039 start_date=`date`
1040 echo $start_date > $SUMMARY
1041
1042 of_path=
1043 if test "x$OPTFILE" != xNONE ; then
1044 if test -r $OPTFILE ; then
1045 # get the path
1046 path=${OPTFILE%/*}
1047 if test "x$path" = x ; then
1048 of_path=`pwd`
1049 else
1050 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1051 fi
1052 file=${OPTFILE##*/}
1053 OPTFILE=$of_path/$file
1054 cp $OPTFILE $DRESULTS
1055 echo >> $SUMMARY
1056 echo " OPTFILE=$OPTFILE" >> $SUMMARY
1057 else
1058 echo | tee $SUMMARY
1059 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
1060 exit 1
1061 fi
1062 else
1063 echo >> $SUMMARY
1064 echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
1065 echo " so the genmake default will be used." >> $SUMMARY
1066 fi
1067 echo
1068 echo >> $SUMMARY
1069 if test "x$ADM" = x ; then
1070 if [ $MATCH_CRIT -lt 10 ] ;
1071 then line_0="default "$MATCH_CRIT ;
1072 else line_0="default "$MATCH_CRIT ; fi
1073 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1074 # line_0=" ----T----- ----S----- ----U----- ----V-----"
1075 line_1="G D M c m s m s m s m s"
1076 line_2="E p a R g m m e . m m e . m m e . m m e ."
1077 line_3="N n k u 2 i a a d i a a d i a a d i a a d"
1078 line_4="2 d e n d n x n . n x n . n x n . n x n ."
1079 for ii in $PTRACERS_NUM ; do
1080 # tst=`eval 'echo $HAVE_PTR0'$ii`
1081 # if test "x$tst" = xt ; then
1082 line_0="$line_0 --PTR 0"$ii"--"
1083 line_1="$line_1 m s"
1084 line_2="$line_2 m m e ."
1085 line_3="$line_3 i a a d"
1086 line_4="$line_4 n x n ."
1087 # fi
1088 done
1089 echo "$line_0" | tee -a $SUMMARY
1090 echo "$line_1" | tee -a $SUMMARY
1091 echo "$line_2" | tee -a $SUMMARY
1092 echo "$line_3" | tee -a $SUMMARY
1093 echo "$line_4" | tee -a $SUMMARY
1094 echo " " | tee -a $SUMMARY
1095 else
1096 echo "ADJOINT=true" >> $SUMMARY
1097 echo >> $SUMMARY
1098 if [ $MATCH_CRIT -lt 10 ] ;
1099 then line_0="default "$MATCH_CRIT ;
1100 else line_0="default "$MATCH_CRIT ; fi
1101 echo "$line_0" | tee -a $SUMMARY
1102 cat << EOF | tee -a $SUMMARY
1103 G D M C G
1104 E p a R o r
1105 N n k u s a
1106 2 d e n t d
1107
1108 EOF
1109 fi
1110
1111 # ...and each test directory...
1112 for dir in $TESTDIRS ; do
1113
1114 # Cleanup only!
1115 if test "x$CLEANUP" = xt ; then
1116 if test -r $dir/build/Makefile ; then
1117 echo ' ------ clean dir:' $dir/build
1118 ( cd $dir/build ; make CLEAN )
1119 fi
1120 if test -d $dir/run/CVS ; then
1121 echo ' ------ clean dir:' $dir/run
1122 run_clean $dir/run
1123 fi
1124 (
1125 cd $dir
1126 rm -rf tr_run.*
1127 )
1128 continue
1129 fi
1130
1131 # Verify that the testdir exists and contains previous
1132 # results in the correct location--or skip this directory!
1133 fout=
1134 if test "x$ADM" = x ; then
1135 fout=$dir"/results/"$ref_outp
1136 else
1137 fout=$dir"/results_ad/"$ref_outp
1138 fi
1139 if test ! -r $fout ; then
1140 echo "can't read \"$fout\" -- skipping $dir"
1141 continue
1142 fi
1143 if test "x$ADM" = x ; then
1144 check_for_add_mon_output $fout
1145 fi
1146
1147 # Check for additional types of monitor output
1148
1149 builddir="build"
1150 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1151 rundir="run"
1152 if test ! -d $dir/$rundir ; then
1153 rundir=$builddir
1154 fi
1155 CODE_DIR=$dir/$code_dir
1156 BUILD_DIR=$dir/$builddir
1157
1158 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
1159 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1160 continue
1161 fi
1162 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1163 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1164 continue
1165 fi
1166
1167 # Check whether there are "extra runs" for this testdir
1168 extra_runs=
1169 if test "x$ADM" = x ; then
1170 ex_run_dirs=`( cd $dir ; echo input.* )`
1171 #echo "ex_run_dirs='$ex_run_dirs'"
1172 for exd in $ex_run_dirs ; do
1173 name=`echo $exd | sed -e 's/input.//g'`
1174 outf="$dir/results/output.$name.txt"
1175 if test -f $outf -a -r $outf ; then
1176 if test "x$MULTI_THREAD" = "xt" ; then
1177 if test -r $dir"/"$exd"/eedata.mth" ; then
1178 extra_runs="$extra_runs $name"
1179 #else echo $dir"/"$exd"/eedata.mth: not found"
1180 fi
1181 else
1182 extra_runs="$extra_runs $name"
1183 fi
1184 fi
1185 done
1186 fi
1187
1188 echo "-------------------------------------------------------------------------------"
1189 echo
1190 if test "x$extra_runs" = "x" ; then
1191 echo "Experiment: $dir"
1192 else
1193 echo "Experiment: $dir ; extra_runs=$extra_runs"
1194 fi
1195 echo
1196 unset genmake makedepend make run
1197 results=$EMPTY_RESULTS
1198
1199 # Create an output dir for each OPTFILE/tdir combination
1200 rel_CDIR=$DRESULTS"/"$dir
1201 mkdir $rel_CDIR
1202 CDIR=`pwd`"/$rel_CDIR"
1203
1204 if test "x$CLEANUP" = xt ; then
1205 echo '====>>> this is to check that we never go through this part <<< ==='
1206 makeclean $dir/$builddir \
1207 && run_clean $dir/$rundir
1208 else
1209 genmakemodel $dir/$builddir && genmake=Y \
1210 && makeclean $dir/$builddir \
1211 && run_clean $dir/$rundir \
1212 && symlink_mpifiles $dir $code_dir $builddir \
1213 && makedependmodel $dir/$builddir && makedepend=Y \
1214 && makemodel $dir/$builddir && make=Y \
1215 && linkdata $dir/$rundir $input_dirs \
1216 && runmodel $dir/$rundir && run=Y \
1217 && results=`testoutput_run $dir $rundir $ref_outp`
1218 fi
1219
1220 echo
1221 # if test "x$ADM" = x ; then
1222 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1223 echo
1224 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1225 touch $CDIR"/summary.txt"
1226 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1227 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1228 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1229 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1230 echo "tdir='$dir'" >> $CDIR"/summary.txt"
1231
1232 for ex in $extra_runs ; do
1233 unset run
1234 results=$EMPTY_RESULTS
1235 # Create an output dir for each OPTFILE/tdir.ex combination
1236 rel_CDIR=$DRESULTS"/"$dir"."$ex
1237 mkdir $rel_CDIR
1238 CDIR=`pwd`"/$rel_CDIR"
1239 test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex"
1240 run_clean $dir/tr_run.$ex
1241 linkdata $dir/tr_run.$ex input.$ex input
1242 runmodel $dir/tr_run.$ex && run=Y \
1243 && results=`testoutput_run $dir tr_run.$ex "output.${ex}.txt"`
1244 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
1245 fres="$fres.$ex"
1246 echo
1247 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
1248 touch $CDIR"/summary.txt"
1249 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt"
1250 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1251 echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1252 echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1253 echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt"
1254 if test "x$POSTCLEAN" = xt ; then
1255 run_clean $dir/tr_run.$ex
1256 fi
1257 done
1258 # else
1259 # fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
1260 # fres=$fres"$results $dir"
1261 # echo
1262 # echo "$fres" >> $SUMMARY
1263 # touch $CDIR"/summary.txt"
1264 # echo "fresults='$fres'" >> $CDIR"/summary.txt"
1265 # echo "MACH='$MACH'" >> $CDIR"/summary.txt"
1266 # echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
1267 # echo "DATE='$DATE'" >> $CDIR"/summary.txt"
1268 # echo "tdir='$dir'" >> $CDIR"/summary.txt"
1269 # fi
1270 if test "x$ADM" = xt ; then
1271 grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \
1272 >> $CDIR"/summary.txt"
1273 fi
1274
1275 #postclean $dir/$builddir
1276 if test "x$POSTCLEAN" = xt ; then
1277 makeclean $dir/$builddir \
1278 && run_clean $dir/$rundir
1279 fi
1280
1281 echo "-------------------------------------------------------------------------------"
1282
1283 done
1284
1285 printf "Start time: " >> $SUMMARY
1286 echo $start_date >> $SUMMARY
1287 printf "End time: " >> $SUMMARY
1288 date >> $SUMMARY
1289
1290 # If addresses were supplied and mpack built successfully, then try
1291 # to send email using mpack.
1292 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1293 echo "No results email was sent."
1294 else
1295 if test "x$HAVE_MPACK" = xt ; then
1296 tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
1297 && gzip $DRESULTS".tar" \
1298 && $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES
1299 RETVAL=$?
1300 if test "x$RETVAL" != x0 ; then
1301 echo
1302 echo "Warning: The tar, gzip, & mpack step failed. Please send email"
1303 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1304 echo " summary of results from the directory \"$DRESULTS\"."
1305 echo
1306 else
1307 echo
1308 echo "An email containing results was sent to the following addresses:"
1309 echo " \"$ADDRESSES\""
1310 echo
1311 fi
1312 test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
1313 test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
1314 fi
1315 fi
1316
1317 rm -f tr_cmpnum.c tr_cmpnum
1318
1319 if test "x$CLEANUP" != xt ; then
1320 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \.//'
1321 if test -e tr_out.txt ; then
1322 mv tr_out.txt tr_out.txt.old
1323 fi
1324 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \.//g' > tr_out.txt
1325 fi
1326
1327 if test "x$DELDIR" = xt ; then
1328 rm -rf $DRESULTS
1329 fi

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