--- MITgcm/verification/testreport 2008/08/19 18:29:12 1.117 +++ MITgcm/verification/testreport 2010/12/29 22:35:50 1.153 @@ -1,6 +1,6 @@ #! /usr/bin/env bash # -# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/verification/testreport,v 1.117 2008/08/19 18:29:12 jmc Exp $ +# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/verification/testreport,v 1.153 2010/12/29 22:35:50 jmc Exp $ # $Name: $ # @@ -11,37 +11,43 @@ echo echo "where possible OPTIONS are:" echo " (-help|-h) print usage" - echo " (-mth) run multi threaded (using eedata.mth)" + echo " (-mth) run multi-threaded (using eedata.mth)" echo " (-mpi) compile and run using MPI" - echo " (-ieee|-noieee) if possible, use IEEE compiler flags" + echo " (-ieee/-noieee) if possible, use IEEE compiler flags" echo " (DEF=\"-ieee\")" echo " (-gsl) compile with \"-gsl\" flag" - echo " (-of=|-optfile=)STRING list of optfiles to use" - echo " (-a|-addr) STRING list of email recipients" + echo " (-use_r4|-ur4) if allowed, use real*4 type for '_RS' variable" + echo " (-optfile|-of) STRING list of optfiles to use" + echo " (-addr|-a) STRING list of email recipients" echo " (DEF=\"\" no email is sent)" - echo " (-mpd|-mpackdir) DIR location of the mpack utility" + echo " (-mpackdir|-mpd) DIR location of the mpack utility" echo " (DEF=\"../tools/mpack-1.6\")" - echo " (-t|-tdir) STRING list of group and/or exp. dirs to test" + echo " (-tdir|-t) STRING list of group and/or exp. dirs to test" echo " (recognized groups: basic, tutorials)" echo " (DEF=\"\" which test all)" - echo " (-skd|-skipdir) STRING list of exp. dirs to skip" + echo " (if list= 'start_from THIS_EXP' then" + echo " test THIS_EXP + all the following)" + echo " (-skipdir|-skd) STRING list of exp. dirs to skip" echo " (DEF=\"\" which test all)" - echo " (-b|-bash) STRING preferred location of a \"bash\" or" + echo " (-bash|-b) STRING preferred location of a \"bash\" or" echo " Bourne-compatible \"sh\" shell" echo " (DEF=\"\" for \"bash\")" echo " (-adm|-ad) perform an adjoint run" - echo " (-command) STRING command to run" - echo " (DEF=\"make output.txt\")" - echo " (-m|-make) STRING command to use for \"make\"" + echo " (-oad) perform an OpenAD adjoint run" + echo " (-command|-c) STRING command to run" + echo " (-makedepend|-md) STRING command to use for \"makedepend\"" + echo " (-make|-m) STRING command to use for \"make\"" echo " (DEF=\"make\")" echo " (-odir) STRING used to build output directory name" echo " (DEF=\"hostname\")" - echo " (-ptr|-ptracers) STRING specify which ptracers to test" + echo " (-ptracers|-ptr) STRING specify which ptracers to test" echo " (DEF=\"1 2 3 4 5\")" echo " (-match) NUMBER Matching Criteria (number of digits)" - echo " (DEF=\"12\")" + echo " (DEF=\"$MATCH_CRIT\")" echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" echo " (-clean) *ONLY* run \"make CLEAN\"" + echo " (-norun|-nr) skip the \"runmodel\" stage (stop after make)" + echo " (-runonly|-ro) *ONLY* run stage (=\"-quick\" without make)" echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" echo " (-nogenmake|-ng) skip the genmake stage" echo " (-noclean|-nc) skip the \"make clean\" stage" @@ -103,7 +109,7 @@ { # testoutput_var dir s1 label subdir reference_output # - # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE + # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE # with same output from reference file $dir/results/$reference_output # using search strings s1 and text label @@ -175,7 +181,7 @@ fi fi rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt - + return $digits_of_similarity } @@ -211,7 +217,7 @@ eval "HAVE_PTR0"$ii"=t" else eval "HAVE_PTR0"$ii"=f" - if test "x$ADM" = x ; then + if test "x$ADM" = x -a "x$OADM" = x; then # remove this ptr from the list of output variable to check # echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` @@ -228,7 +234,7 @@ listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"` fi if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi - echo "listVar='$listVar'" > $CDIR"/summary.txt" + echo "listVar='$listVar'" > $locDIR"/summary.txt" allargs="" for xx in $listVar do @@ -263,18 +269,18 @@ testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; 'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; - 'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; - 'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; - 'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; - 'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; + 'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; + 'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; + 'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; + 'Qntsd') testoutput_var $1 "forcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; 'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;; 'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;; 'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;; 'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;; 'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;; - 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;; - 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;; - 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;; + 'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Heff max" $2 $3; yy=$? ;; + 'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Heff mean" $2 $3; yy=$? ;; + 'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Heff StDv" $2 $3; yy=$? ;; 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;; 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;; 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;; @@ -290,13 +296,13 @@ done nbVar=`echo $listVar | awk '{print NF}'` - if [ $nbVar -lt $LEN_CHECK_LIST ] ; then + if [ $nbVar -lt $LEN_CHECK_LIST ] ; then #-- fill line (up to standard length) with dot: adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'` echo $allargs $adNul else echo $allargs - fi + fi # <-- same processing for adjoint & forward test } @@ -314,13 +320,18 @@ ( cd $1; command="$GENMAKE2 -ds -m $MAKE" - if test "x$ADM" = x ; then - command="$command --mods=../code" - else + if test "x$MKDEPEND" != x ; then + command="$command -makedepend=$MKDEPEND" + fi + if test "x$ADM" = xt ; then command="$command --mods=../code_ad" + elif test "x$OADM" = xt ; then + command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'" + else + command="$command -mods=../code" fi if test "x$OPTFILE" != xNONE ; then - command="$command --optfile=$OPTFILE" + command="$command -optfile=$OPTFILE" fi if test "x$IEEE" != x ; then command="$command -ieee" @@ -331,28 +342,35 @@ if test "x$MPI" = xt ; then command="$command -mpi" fi + if test "x$MULTI_THREAD" = xt ; then + #- run multi-threaded using OpenMP: + command="$command -omp" + fi + if test "x$USE_R4" = xt ; then + command="$command -use_r4" + fi if test "x$TS" = xt ; then command="$command -ts" fi if test "x$PAPIS" = xt ; then command="$command -papis" - else + else if test "x$PCLS" = xt ; then command="$command -pcls" fi fi - printf 'genmake ... ' 1>&2 - $command > make.log 2>&1 + printf 'genmake ... ' + eval $command > genmake.tr_log 2>&1 RETVAL=$? # Reduce the size of the testing emails! head -100 Makefile > $CDIR/Makefile_head if test "x$RETVAL" != x0 ; then - tail make.log - echo "genmakemodel: genmake failed" 1>&2 - cp genmake_* make.log $CDIR + tail genmake.tr_log + echo "genmakemodel: genmake failed" + cp genmake.log genmake_* genmake.tr_log $CDIR return 1 else - echo "successful" 1>&2 + echo "successful" fi ) fi @@ -361,6 +379,7 @@ makeclean() { # makeclean directory + if test "x$NODEPEND" = xf ; then rm -f $1/make.tr_log ; fi if test "x$NOCLEAN" = xt ; then echo "make Clean skipped!" else @@ -368,17 +387,20 @@ cd $1; #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi if test -r Makefile ; then - printf 'clean build-dir: make Clean ... ' 2>&1 - $MAKE Clean >> make.log 2>&1 + printf 'clean build-dir: make Clean ... ' + rm -f Makefile.old + $MAKE Clean >> make.tr_log 2>&1 RETVAL=$? if test "x$RETVAL" != x0 ; then - tail make.log - echo "makeclean: \"make Clean\" failed" 1>&2 - cp make.log $CDIR"/make.log" + tail make.tr_log + echo "makeclean: \"make Clean\" failed" + cp make.tr_log genmake.log genmake.tr_log $CDIR return 1 fi + echo successful + else + echo '' fi - echo successful 1>&2 exit 0 ) fi @@ -392,16 +414,16 @@ else ( cd $1; - printf 'clean run-dir ... ' 2>&1 + printf 'clean run-dir ... ' # part of what is done after "make clean" when doing "make CLEAN" find . -name "*.meta" -exec rm {} \; find . -name "*.data" -exec rm {} \; find . -name "fort.*" -exec rm {} \; find . -type l -exec rm {} \; - rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime + rm -f $EXECUTABLE $RUNLOG *.txt STD* *diagnostics.log datetime rm -rf mnc_test_* rm -f *_MIT_CE_000.opt0000 costfunction*0000 - echo successful 1>&2 + echo successful exit 0 ) fi @@ -415,16 +437,16 @@ else ( cd $1; - printf 'make depend ... ' 1>&2 - $MAKE depend >> make.log 2>&1 + printf 'make depend ... ' + $MAKE depend >> make.tr_log 2>&1 RETVAL=$? if test "x$RETVAL" != x0 ; then - tail make.log - echo "makedependmodel: make depend failed" 1>&2 - cp make.log $CDIR"/make.log" + tail make.tr_log + echo "makedependmodel: make depend failed" + cp make.tr_log genmake.log genmake.tr_log $CDIR return 1 else - echo successful 1>&2 + echo successful fi ) fi @@ -434,28 +456,41 @@ { # makemodel directory ( + if test "x$NOMAKE" = xt ; then + cd $1; + if test -x $EXECUTABLE ; then + echo "make skipped!" + else + echo "no executable!" + return 2 + fi + else cd $1; if test -r Makefile ; then - printf 'make ... ' 1>&2 - if test "x$ADM" = x ; then + printf 'make ... ' + if test "x$ADM" = xt ; then + $MAKE adall >> make.tr_log 2>&1 + elif test "x$OADM" = xt ; then + $MAKE adAll >> make.tr_log 2>&1 + else if test "x$JOBS" = x ; then - $MAKE >> make.log 2>&1 + $MAKE >> make.tr_log 2>&1 else - $MAKE -j $JOBS >> make.log 2>&1 + $MAKE -j $JOBS >> make.tr_log 2>&1 fi - else - $MAKE adall >> make.log 2>&1 fi RETVAL=$? if test "x$RETVAL" != x0 ; then - tail make.log - echo failed 1>&2 - cp make.log $CDIR"/make.log" + tail make.tr_log + echo failed + cp make.tr_log genmake.log genmake.tr_log $CDIR + rm -f $EXECUTABLE return 1 else - echo successful 1>&2 + echo successful fi fi + fi ) } @@ -469,7 +504,7 @@ code_dir=$2 BUILD_DIR=$dir/$3 CODE_DIR=$dir/$code_dir - + # These are files that should replace their counter-part when using -mpi MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi" -print)` @@ -504,7 +539,7 @@ fi done fi - + } linkdata() @@ -515,14 +550,33 @@ if test -d $1 ; then ( cd $1 ; shift + echo 'linkdata from dirs:' $* + inpMPI=`(cd ../$1 ; find . -name "*.mpi" -print | sed 's:^\./::')` + for xx in $inpMPI ; do + if test -r "../"$1"/"$xx ; then + # found 1 _mpi sfx file in 1rst input dir and it is readable + yy=`echo $xx | sed 's:\.mpi$::'` + if test "x$MPI" = "xt" ; then + # mpi test: remove symbolic link & link _mpi sfx file + if test -h $yy ; then rm -f $yy ; fi + if test ! -r $yy ; then + ln -sf "../"$1"/"$xx $yy ; + printf " $xx" 1>&2 + fi + else + # not mpi test: remove symbolic link + if test -h $yy ; then rm -f $yy ; fi + fi + fi + done if test -r "../"$1"/eedata.mth" ; then # found eedata.mth in 1rst input dir and it is readable if test "x$MULTI_THREAD" = "xt" ; then # multi-threaded test: remove symbolic link & link eedata.mth if test -h eedata ; then rm -f eedata ; fi - if test ! -r eedata ; then + if test ! -r eedata ; then ln -sf "../"$1"/eedata.mth" eedata ; - printf 'eedata.mth ' 1>&2 + printf ' eedata.mth' 1>&2 fi else # not multi-threaded test: remove eedata symbolic link @@ -532,7 +586,7 @@ prevDir='NONE' for ldir in $* ; do if test -d "../"$ldir -a $ldir != $prevDir ; then - printf 'ldir='${ldir} 1>&2 + printf " ldir=${ldir}:" 1>&2 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` for i in $files ; do if test ! -d "../"$ldir/$i ; then @@ -542,10 +596,12 @@ fi fi done + printf ' ;' 1>&2 if test -x "../"$ldir"/"prepare_run ; then - "../"$ldir"/"prepare_run + "../"$ldir"/"prepare_run 1>&2 + else + echo '' 1>&2 fi - printf ' ; ' 1>&2 fi prevDir=$ldir done @@ -557,61 +613,70 @@ { # runmodel directory # - # runs "$COMMAND in "directory" + # runs "$COMMAND in "directory" # (where "$COMMAND" is relative to "directory") ( cd $1 - printf 'runmodel in %s ...' $1 1>&2 - # make output.txt - echo - if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then + printf 'runmodel in %s ... ' $1 + if test -L $EXECUTABLE ; then + if test -x "../"$builddir"/"$EXECUTABLE ; then diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1 - outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; rm -f run.log ; fi + outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; fi + else rm -f $EXECUTABLE + fi fi if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then - echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00 + echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp ln -sf "../"$builddir"/"$EXECUTABLE . fi if test ! -x $EXECUTABLE ; then - rm -f run.log ; touch run.log - if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi - echo " no executable:" $EXECUTABLE >> run.log + rm -f $RUNLOG ; touch $RUNLOG + if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi + echo " no executable:" $EXECUTABLE >> $RUNLOG RETVAL=8 ENDVAL=-1 else if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then # output do not exist or is older than executable: - rm -f run.log ; touch run.log - if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi - ( eval $COMMAND ) >> run.log 2>&1 + rm -f $RUNLOG ; touch $RUNLOG + if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi + ( eval $COMMAND ) >> $RUNLOG 2>&1 RETVAL=$? else RETVAL=0 - if test -f run.log ; then - if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi - echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1 - else - touch run.log - if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi - echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1 - echo " no previous run.log: assume NORMAL END" >> run.log 2>&1 + if test -f $RUNLOG ; then + if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi + echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1 + else + touch $RUNLOG + if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi + echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1 + echo " no previous $RUNLOG: assume NORMAL END" >> $RUNLOG 2>&1 fi fi - ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'` + #ENDVAL=`cat $RUNLOG | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'` + ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'` fi - rm -f run.log_00 - #if test "x$RETVAL" = x0 ; then + rm -f run.log_tmp if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then - tail run.log - echo successful 1>&2 + echo successful + printf '=> output from running in %s :\n' $1 1>&2 + tail $RUNLOG | sed 's/^.*/> &/g' 1>&2 # === Reduce the size of the testing emails! #cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi return 0 + elif [ $RETVAL -ne 0 -a $ENDVAL -gt 0 ] ; then + #-- for some weird cases (run is finihed but with error code) + echo 'finished with error (run:' $RETVAL ' end:' $ENDVAL ')' + printf '=> output from running in %s :\n' $1 1>&2 + tail $RUNLOG | sed 's/^.*/> &/g' 1>&2 + return 0 else - tail run.log - echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2 - cp run.log $CDIR"/run.log" + echo 'failed (run:' $RETVAL ' end:' $ENDVAL ')' + printf '=> output from running in %s :\n' $1 1>&2 + tail $RUNLOG | sed 's/^.*/> &/g' 1>&2 + cp $RUNLOG $CDIR"/"$RUNLOG if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi return 1 fi @@ -662,7 +727,7 @@ return 0 else echo - echo "ERROR: failed to compile comparison code -- please specify" + echo "ERROR: failed to compile comparison code -- please specify" echo " a C compiler using the CC environment variable." exit 1 fi @@ -681,7 +746,7 @@ printf '%3s' $listPrt # line below does not work on hp-ux_ia64 : do those substitutions later on # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < / $OUTPUTFILE" @@ -964,7 +1084,7 @@ # (use default or load experiment-specific list from file "tr_checklist") # content : 1rst = main variable used to decide if it pass or FAIL # others = number of matching digits to be printed in summary.txt -if test "x$ADM" = x ; then +if test "x$ADM" = x -a "x$OADM" = x; then DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` @@ -977,7 +1097,11 @@ fi # create the FORTRAN comparison code -createcodelet +if test -x tr_cmpnum ; then + echo "skipping comparison code build" +else + createcodelet +fi # build the mpack utility (if ADDRESSES = NONE, do it to test the build) if test "x$ADDRESSES" = x ; then @@ -988,13 +1112,20 @@ # Create a uniquely named directory to store results CMDLINE=$0 -for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done +for xx in "$@" ; do nw=`echo $xx | wc -w` + if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" + else CMDLINE="$CMDLINE '$xx'" ; fi +done +#for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done MACH=`hostname` UNAMEA=`uname -a` DATE=`date +%Y%m%d` BASE="tr_"$MACH"_"$DATE"_" if test "x$OUTDIR" != x ; then BASE="tr_"$OUTDIR"_"$DATE"_" +else + short_name=`hostname | sed 's/\..*$//'` + BASE="tr_"$short_name"_"$DATE"_" fi DNUM=0 DRESULTS="$BASE$DNUM" @@ -1036,17 +1167,16 @@ fi else echo >> $SUMMARY - echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY - echo " so the genmake default will be used." >> $SUMMARY + echo "No \"OPTFILE\" was specified ; genmake2 found and uses:" >> $SUMMARY + #-note: to be filled later after 1rst run fi echo echo >> $SUMMARY -if test "x$ADM" = x ; then - if [ $MATCH_CRIT -lt 10 ] ; - then line_0="default "$MATCH_CRIT ; +if test "x$ADM" = x -a "x$OADM" = x; then + if [ $MATCH_CRIT -lt 10 ] ; + then line_0="default "$MATCH_CRIT ; else line_0="default "$MATCH_CRIT ; fi line_0="$line_0 ----T----- ----S----- ----U----- ----V-----" -# line_0=" ----T----- ----S----- ----U----- ----V-----" line_1="G D M c m s m s m s m s" line_2="E p a R g m m e . m m e . m m e . m m e ." line_3="N n k u 2 i a a d i a a d i a a d i a a d" @@ -1067,8 +1197,8 @@ else echo "ADJOINT=true" >> $SUMMARY echo >> $SUMMARY - if [ $MATCH_CRIT -lt 10 ] ; - then line_0="default "$MATCH_CRIT ; + if [ $MATCH_CRIT -lt 10 ] ; + then line_0="default "$MATCH_CRIT ; else line_0="default "$MATCH_CRIT ; fi echo "$line_0" | tee -a $SUMMARY cat << EOF | tee -a $SUMMARY @@ -1079,14 +1209,16 @@ EOF fi +echo "-------------------------------------------------------------------------------" # ...and each test directory... for dir in $TESTDIRS ; do - + # set builddir & rundir: builddir="build" if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi rundir="run" + pfxdir="tr_$rundir" if test ! -d $dir/$rundir ; then rundir=$builddir fi @@ -1095,22 +1227,27 @@ # Cleanup only! if test "x$CLEANUP" = xt ; then - if test -r $BUILD_DIR/Makefile ; then - echo ' ------ clean dir:' $dir/$builddir - ( cd $BUILD_DIR ; make CLEAN ) - fi + echo -n ' --- dir:' $BUILD_DIR ': ' + makeclean $BUILD_DIR + ( cd $BUILD_DIR + rm -f $EXECUTABLE *.bak + rm -f genmake_state genmake_*optfile genmake.log + rm -f genmake.tr_log make.tr_log + ) if test -d $dir/$rundir/CVS ; then - echo ' ------ clean dir:' $dir/$rundir + echo -n ' --- dir:' $dir/$rundir ': ' run_clean $dir/$rundir fi - ( - cd $dir - rm -rf tr_run.* - ) + trdir=`( cd $dir ; find . -type d -name "$pfxdir.*" -print | sed 's/^.\///')` + ttd=`echo $trdir | wc -w` + if test $ttd != 0 ; then + echo ' --- rm dir:' $trdir + ( cd $dir ; rm -rf $trdir ) + fi continue fi - # Verify that the testdir exists and contains previous + # Verify that the testdir exists and contains previous # results in the correct location--or skip this directory! fout=$dir"/results/"$ref_outp if test ! -r $fout ; then @@ -1128,30 +1265,47 @@ echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir" continue fi + if test "x$MPI" = "xt" -a "x$MULTI_THREAD" = "xt" ; then + retv=`check_eedata $CODE_DIR"/SIZE.h_mpi" $dir"/input/eedata.mth"` + if test $retv != 0 ; then + echo "input/eedata.mth tiling misfit -- skipping $dir" + continue + fi + fi # Check whether there are "extra runs" for this testdir extra_runs= - ex_run_dirs=`( cd $dir ; echo $inputdir.* )` + if test "x$NORUN" = xf ; then + ex_run_dirs=`( cd $dir ; echo $inputdir.* )` + fi #echo "ex_run_dirs='$ex_run_dirs'" for exd in $ex_run_dirs ; do name=`echo $exd | sed -e "s/$inputdir\.//"` refExOut=`echo $ref_outp | sed "s/\./.${name}./"` outf="$dir/results/$refExOut" if test -f $outf -a -r $outf ; then - if test "x$MULTI_THREAD" = "xt" ; then - if test -r $dir"/"$exd"/eedata.mth" ; then + if test "x$MULTI_THREAD" = "xt" ; then + if test -r $dir"/"$exd"/eedata.mth" ; then + if test "x$MPI" = "xt" ; then + retv=`check_eedata $CODE_DIR"/SIZE.h_mpi" $dir"/"$exd"/eedata.mth"` + if test $retv = 0 ; then extra_runs="$extra_runs $name" - #else echo $dir"/"$exd"/eedata.mth: not found" + else + echo $exd"/eedata.mth tiling misfit -- skipping $dir" fi - else + else extra_runs="$extra_runs $name" + fi + #else echo $dir"/"$exd"/eedata.mth: not found" fi + else + extra_runs="$extra_runs $name" + fi fi done - echo "-------------------------------------------------------------------------------" echo - if test "x$extra_runs" = "x" ; then + if test "x$extra_runs" = "x" ; then echo "Experiment: $dir" else echo "Experiment: $dir ; extra_runs=$extra_runs" @@ -1161,40 +1315,43 @@ results=$EMPTY_RESULTS # Create an output dir for each OPTFILE/tdir combination - rel_CDIR=$DRESULTS"/"$dir - mkdir $rel_CDIR - CDIR=`pwd`"/$rel_CDIR" - - if test "x$CLEANUP" = xt ; then - echo '====>>> this is to check that we never go through this part <<< ===' - makeclean $dir/$builddir \ - && run_clean $dir/$rundir + locDIR=$DRESULTS"/"$dir + mkdir $locDIR + CDIR=`pwd`"/$locDIR" + + if test "x$NORUN" = xt ; then + run=N + genmakemodel $dir/$builddir && genmake=Y \ + && makeclean $dir/$builddir \ + && symlink_mpifiles $dir $code_dir $builddir \ + && makedependmodel $dir/$builddir && makedepend=Y \ + && makemodel $dir/$builddir && make=Y else genmakemodel $dir/$builddir && genmake=Y \ && makeclean $dir/$builddir \ - && run_clean $dir/$rundir \ && symlink_mpifiles $dir $code_dir $builddir \ && makedependmodel $dir/$builddir && makedepend=Y \ && makemodel $dir/$builddir && make=Y \ - && linkdata $dir/$rundir $inputdir input \ + && run_clean $dir/$rundir \ + && linkdata $dir/$rundir $inputdir \ && runmodel $dir/$rundir && run=Y \ && results=`testoutput_run $dir $rundir $ref_outp` fi - - echo + #echo "results='$results'" + fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` - echo + echo 1>&2 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /> $SUMMARY - touch $CDIR"/summary.txt" - echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" - echo "MACH='$MACH'" >> $CDIR"/summary.txt" - echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" - echo "DATE='$DATE'" >> $CDIR"/summary.txt" - echo "tdir='$dir'" >> $CDIR"/summary.txt" + touch $locDIR"/summary.txt" + echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt" + echo "MACH='$MACH'" >> $locDIR"/summary.txt" + echo "UNAMEA='$UNAMEA'" >> $locDIR"/summary.txt" + echo "DATE='$DATE'" >> $locDIR"/summary.txt" + echo "tdir='$dir'" >> $locDIR"/summary.txt" if test "x$ADM" = xt ; then - head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" + head -1 $dir/$builddir/taf_ad.log >> $locDIR"/summary.txt" grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ - >> $CDIR"/summary.txt" + >> $locDIR"/summary.txt" fi for ex in $extra_runs ; do @@ -1203,42 +1360,71 @@ # reference output file refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"` # Create an output dir for each OPTFILE/tdir.ex combination - rel_CDIR=$DRESULTS"/"$dir"."$ex - mkdir $rel_CDIR - CDIR=`pwd`"/$rel_CDIR" - test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" - run_clean $dir/tr_run.$ex - linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input - runmodel $dir/tr_run.$ex && run=Y \ - && results=`testoutput_run $dir tr_run.$ex $refExOut` + locDIR=$DRESULTS"/"$dir"."$ex + mkdir $locDIR + CDIR=`pwd`"/$locDIR" + test ! -e "$dir/$pfxdir.$ex" && mkdir "$dir/$pfxdir.$ex" + run_clean $dir/$pfxdir.$ex + linkdata $dir/$pfxdir.$ex $inputdir.$ex $inputdir + runmodel $dir/$pfxdir.$ex && run=Y \ + && results=`testoutput_run $dir $pfxdir.$ex $refExOut` fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` fres="$fres.$ex" - echo + echo 1>&2 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /> $SUMMARY - touch $CDIR"/summary.txt" - echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" - echo "MACH='$MACH'" >> $CDIR"/summary.txt" - echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" - echo "DATE='$DATE'" >> $CDIR"/summary.txt" - echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" + touch $locDIR"/summary.txt" + echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt" + echo "MACH='$MACH'" >> $locDIR"/summary.txt" + echo "UNAMEA='$UNAMEA'" >> $locDIR"/summary.txt" + echo "DATE='$DATE'" >> $locDIR"/summary.txt" + echo "tdir='$dir.$ex'" >> $locDIR"/summary.txt" if test "x$ADM" = xt ; then - head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" - grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \ - >> $CDIR"/summary.txt" + head -1 $dir/$builddir/taf_ad.log >> $locDIR"/summary.txt" + grep -A3 'Seconds in section "ALL' $dir/$pfxdir.$ex/$OUTPUTFILE \ + >> $locDIR"/summary.txt" fi if test "x$POSTCLEAN" = xt ; then - run_clean $dir/tr_run.$ex + run_clean $dir/$pfxdir.$ex fi done + if test -f $DRESULTS"/"genmake_state ; then : ; else + if test -f $dir/$builddir/Makefile ; then + mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'` + echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state + sed -n '/^# executed by:/,+1 p' $dir/$builddir/Makefile >> $DRESULTS/genmake_state + echo " $mkOpt" >> $DRESULTS/genmake_state + if test "x$OPTFILE" = xNONE ; then + eval $mkOpt + sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\ + $SUMMARY > tr_0.tmp_log + RETVAL=$? + if test "x$RETVAL" = x0 ; then rm -f $SUMMARY + cp tr_0.tmp_log $SUMMARY + else rm -f tr_0.tmp_log + fi + fi + gmkLog=$dir/$builddir/genmake.log + grep '^Get compiler version using:' $gmkLog > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + echo "from '$gmkLog', extract compiler version:" >> $DRESULTS/genmake_state + sed -n '/Get compiler version/,/<-- compiler version/p' $gmkLog \ + | grep -v '^... compiler version ' > tr_1.tmp_log + sed -n '1,/^$/p' tr_1.tmp_log | sed '/^$/d' | sed 's/^./ &/' \ + >> $DRESULTS/genmake_state + rm -f tr_1.tmp_log + fi + fi + fi #postclean $dir/$builddir if test "x$POSTCLEAN" = xt ; then makeclean $dir/$builddir \ && run_clean $dir/$rundir fi - + echo "-------------------------------------------------------------------------------" - + done printf "Start time: " >> $SUMMARY @@ -1267,13 +1453,15 @@ echo "An email containing results was sent to the following addresses:" echo " \"$ADDRESSES\"" echo + test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" + test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" fi - test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" - test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" fi fi -rm -f tr_cmpnum.c tr_cmpnum +if test "x$QUICK" = xf -a "x$NORUN" = xf ; then + rm -f tr_cmpnum.c tr_cmpnum +fi if test "x$CLEANUP" != xt ; then cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'