--- MITgcm/verification/testreport	2007/12/06 04:04:38	1.108
+++ MITgcm/verification/testreport	2008/04/06 19:19:47	1.115
@@ -1,6 +1,6 @@
 #! /usr/bin/env bash
 #
-#  $Header: /home/ubuntu/mnt/e9_copy/MITgcm/verification/testreport,v 1.108 2007/12/06 04:04:38 jmc Exp $
+#  $Header: /home/ubuntu/mnt/e9_copy/MITgcm/verification/testreport,v 1.115 2008/04/06 19:19:47 jmc Exp $
 #  $Name:  $
 #
 
@@ -15,9 +15,12 @@
     echo "  (-mpi)                   compile and run using MPI"
     echo "  (-ieee|-noieee)          if possible, use IEEE compiler flags"
     echo "                             (DEF=\"-ieee\")"
+    echo "  (-gsl)                   compile with \"-gsl\" flag"
     echo "  (-of=|-optfile=)STRING   list of optfiles to use"
     echo "  (-a|-addr) STRING        list of email recipients"
     echo "                             (DEF=\"\" no email is sent)"
+    echo "  (-mpd|-mpackdir) DIR     location of the mpack utility"
+    echo "                             (DEF=\"../tools/mpack-1.6\")"
     echo "  (-t|-tdir) STRING        list of group and/or exp. dirs to test"
     echo "                             (recognized groups: basic, tutorials)"
     echo "                             (DEF=\"\" which test all)"
@@ -64,7 +67,8 @@
 build_mpack()
 {
     printf "building the mpack utility...  "
-    if test ! -x "$MPACKDIR/mpack" ; then
+    MPACK="$MPACKDIR/mpack"
+    if test ! -x $MPACK ; then
 	if test ! -d $MPACKDIR ; then
 	    echo
 	    echo "Error: can't find \"$MPACKDIR\""
@@ -73,10 +77,10 @@
 	    echo
 	    HAVE_MPACK=f
 	fi
-	printf "building mpack...  "
 	if test "x$CC" = x ; then
 	    export CC=cc
 	fi
+	printf "building mpack (using CC=$CC)...  "
 	( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
 	RETVAL=$?
 	if test "x$RETVAL" != x0 ; then
@@ -87,11 +91,12 @@
 	else
 	    rm -f tr_build_mpack.out
 	    HAVE_MPACK=t
+	    echo "done"
 	fi
     else
 	HAVE_MPACK=t
+	echo "already exist"
     fi
-    echo "OK"
 }
 
 testoutput_var()
@@ -327,6 +332,9 @@
 	    if test "x$IEEE" != x ; then
 		command="$command -ieee"
 	    fi
+	    if test "x$GSL" = xt ; then
+		command="$command -gsl"
+	    fi
 	    if test "x$MPI" = xt ; then
 		command="$command -mpi"
 	    fi
@@ -470,7 +478,7 @@
     CODE_DIR=$dir/$code_dir
     
     # These are files that should replace their counter-part when using -mpi
-    MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
+    MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi" -print)`
 
     #  Is this an MPI run?
     if test "x$MPI" = xt ; then
@@ -621,7 +629,7 @@
 {
     # create codelet for comparing model output
 
-    printf "creating the comparison code...  "
+    printf "creating the comparison code (using CC=$CC)...  "
     cat > tr_cmpnum.c <<EOF
 #include <stdio.h>
 #include <math.h>
@@ -718,14 +726,12 @@
 debug=0
 verbose=1
 clean=0
-expts=''
-# ieee=1
 
 IEEE=true
 if test "x$MITGCM_IEEE" != x ; then
     IEEE=$MITGCM_IEEE
 fi
-
+GSL=f
 
 CLEANUP=f
 QUICK=f
@@ -741,7 +747,7 @@
 SKIPDIRS=
 MPACKDIR="../tools/mpack-1.6"
 HAVE_MPACK=
-MPACK="$MPACKDIR/mpack"
+MPACK=
 COMMAND=
 if test "x$MAKE" = x ; then
     MAKE=make
@@ -790,6 +796,10 @@
             ac_prev=ADDRESSES ;;
         -addr=* | --addr=*)
             ADDRESSES=$ac_optarg ;;
+        -mpackdir | --mpackdir | -mpd | --mpd)
+            ac_prev=MPACKDIR ;;
+        -mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*)
+            MPACKDIR=$ac_optarg ;;
 
 	-tdir | --tdir | -t | --t)
             ac_prev=TESTDIRS ;;
@@ -855,6 +865,7 @@
 
 	-ieee) IEEE=true ;;
 	-noieee) IEEE= ;;
+        -gsl) GSL=t ;;
 
 	-verbose) verbose=2 ;;
 	-debug) debug=1 ;;
@@ -975,14 +986,16 @@
 #  create the FORTRAN comparison code
 createcodelet
 
-#  build the mpack utility
-if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
+#  build the mpack utility (if ADDRESSES = NONE, do it to test the build)
+if test "x$ADDRESSES" = x ; then
     echo "skipping mpack build"
 else
     build_mpack
 fi
 
 #  Create a uniquely named directory to store results
+CMDLINE=$0
+for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done
 MACH=`hostname`
 UNAMEA=`uname -a`
 DATE=`date +%Y%m%d`
@@ -1003,9 +1016,10 @@
     exit 1
 fi
 SUMMARY="$DRESULTS/summary.txt"
-printf "Start time:  " >> $SUMMARY
 start_date=`date`
 echo $start_date > $SUMMARY
+echo 'run:' $CMDLINE >> $SUMMARY
+echo 'on :' $UNAMEA  >> $SUMMARY
 
 of_path=
 if test "x$OPTFILE" != xNONE ; then
@@ -1092,7 +1106,7 @@
     #  Cleanup only!
     if test "x$CLEANUP" = xt ; then
 	if test -r $BUILD_DIR/Makefile ; then
-            echo '  ------  clean dir:' $dir/build
+            echo '  ------  clean dir:' $dir/$builddir
 	    ( cd $BUILD_DIR ; make CLEAN )
 	fi
 	if test -d $dir/$rundir/CVS ; then
@@ -1241,7 +1255,7 @@
 done
 
 printf "Start time:  " >> $SUMMARY
-echo $start_date >> $SUMMARY
+echo "$start_date" >> $SUMMARY
 printf "End time:    " >> $SUMMARY
 date >> $SUMMARY