11 |
echo |
echo |
12 |
echo "where possible OPTIONS are:" |
echo "where possible OPTIONS are:" |
13 |
echo " (-help|-h) print usage" |
echo " (-help|-h) print usage" |
14 |
|
echo " ---- type of test : ----" |
15 |
|
echo " (-tlm) perform a Tangent Linear run" |
16 |
|
echo " (-adm|-ad) perform an adjoint run" |
17 |
|
echo " (-oad) perform an OpenAD adjoint run" |
18 |
echo " (-mth) run multi-threaded (using eedata.mth)" |
echo " (-mth) run multi-threaded (using eedata.mth)" |
19 |
echo " (-mpi) use MPI to compile and run on 2 processors" |
echo " (-mpi) use MPI to compile and run on 2 processors" |
20 |
echo " (-MPI) NUMBER use MPI to compile and run on max NUMBER procs" |
echo " (-MPI) NUMBER use MPI to compile and run on max NUMBER procs" |
21 |
echo " (-mfile|-mf) STRING MPI: file with list of possible machines to run on" |
echo " (-mfile|-mf) STRING MPI: file with list of possible machines to run on" |
22 |
|
echo " (-command|-c) STRING command to run (e.g., if non-standard MPI setting)" |
23 |
|
echo " DEF='mitgcmuv' or ='mpirun -np TR_NPROC mitgcmuv'" |
24 |
|
echo " ---- testing options : ----" |
25 |
|
echo " (-optfile|-of) STRING optfile to use" |
26 |
echo " (-fast) use optfile default for compiler flags (no '-ieee')" |
echo " (-fast) use optfile default for compiler flags (no '-ieee')" |
27 |
echo " DEF=off => use IEEE numerics option (if available)" |
echo " DEF=off => use IEEE numerics option (if available)" |
28 |
echo " (-devel) use optfile developement flags (if available)" |
echo " (-devel) use optfile developement flags (if available)" |
29 |
echo " (-gsl) compile with \"-gsl\" flag" |
echo " (-gsl) compile with \"-gsl\" flag" |
30 |
echo " (-use_r4|-ur4) if allowed, use real*4 type for '_RS' variable" |
echo " (-use_r4|-ur4) if allowed, use real*4 type for '_RS' variable" |
|
echo " (-optfile|-of) STRING list of optfiles to use" |
|
|
echo " (-addr|-a) STRING list of email recipients" |
|
|
echo " (DEF=\"\" no email is sent)" |
|
|
echo " (-mpackdir|-mpd) DIR location of the mpack utility" |
|
|
echo " (DEF=\"../tools/mpack-1.6\")" |
|
31 |
echo " (-tdir|-t) STRING list of group and/or exp. dirs to test" |
echo " (-tdir|-t) STRING list of group and/or exp. dirs to test" |
32 |
echo " (recognized groups: basic, tutorials)" |
echo " (recognized groups: basic, tutorials)" |
33 |
echo " (DEF=\"\" which test all)" |
echo " (DEF=\"\" which test all)" |
35 |
echo " test THIS_EXP + all the following)" |
echo " test THIS_EXP + all the following)" |
36 |
echo " (-skipdir|-skd) STRING list of exp. dirs to skip" |
echo " (-skipdir|-skd) STRING list of exp. dirs to skip" |
37 |
echo " (DEF=\"\" which test all)" |
echo " (DEF=\"\" which test all)" |
38 |
echo " (-bash|-b) STRING preferred location of a \"bash\" or" |
echo " (-ts) provide timing information per timestep" |
39 |
echo " Bourne-compatible \"sh\" shell" |
echo " (-papis) provide MFlop/s per timestep using PAPI" |
40 |
|
echo " (-pcls) provide MFlop/s per timestep using PCL" |
41 |
|
echo " ---- system options : ----" |
42 |
|
echo " (-bash|-b) STRING preferred location of a \"bash\" or \"sh\" shell" |
43 |
echo " (DEF=\"\" for \"bash\")" |
echo " (DEF=\"\" for \"bash\")" |
44 |
echo " (-tlm) perform a Tangent Linear run" |
echo " (-ef) STRING used as genmake2 \"-extra_flag\" argument" |
45 |
echo " (-adm|-ad) perform an adjoint run" |
echo " (-ncad) use genmake2 option \"-nocat4ad\" (-ncad)" |
46 |
echo " (-oad) perform an OpenAD adjoint run" |
echo " (-small_f) make target small_f before making target all" |
|
echo " (-command|-c) STRING command to run" |
|
47 |
echo " (-makedepend|-md) STRING command to use for \"makedepend\"" |
echo " (-makedepend|-md) STRING command to use for \"makedepend\"" |
48 |
echo " (-make|-m) STRING command to use for \"make\"" |
echo " (-make|-m) STRING command to use for \"make\"" |
49 |
echo " (DEF=\"make\")" |
echo " (DEF=\"make\")" |
50 |
echo " (-odir) STRING used to build output directory name" |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
51 |
echo " (DEF=\"hostname\")" |
echo " ---- output options : ----" |
|
# echo " (-ptracers|-ptr) STRING specify which ptracers to test" |
|
|
# echo " (DEF=\"1 2 3 4 5\")" |
|
52 |
echo " (-match) NUMBER Matching Criteria (number of digits)" |
echo " (-match) NUMBER Matching Criteria (number of digits)" |
53 |
echo " (DEF=\"$MATCH_CRIT\")" |
echo " (DEF=\"$MATCH_CRIT\")" |
54 |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
echo " (-odir) STRING used to build output directory name" |
55 |
echo " (-ef) STRING used as genmake2 \"-extra_flag\" argument" |
echo " (DEF=\"hostname\")" |
56 |
|
echo " (-addr|-a) STRING list of email recipients" |
57 |
|
echo " (DEF=\"\" no email is sent)" |
58 |
|
echo " (-send) STRING sending command (instead of using mpack)" |
59 |
|
echo " (-savdir|-sd) STRING location to save output tar file to send (DEF='$SAVDIR')" |
60 |
|
echo " (-mpackdir|-mpd) DIR location of the mpack utility" |
61 |
|
echo " (DEF=\"../tools/mpack-1.6\")" |
62 |
|
echo " -- do only some parts: --" |
63 |
echo " (-clean) *ONLY* run \"make CLEAN\" & clean run-dir" |
echo " (-clean) *ONLY* run \"make CLEAN\" & clean run-dir" |
64 |
echo " (-norun|-nr) skip the \"runmodel\" stage (stop after make)" |
echo " (-norun|-nr) skip the \"runmodel\" stage (stop after make)" |
65 |
echo " (-obj) only produces objects (=norun & no executable)" |
echo " (-obj) only produces objects (=norun & no executable)" |
71 |
echo " (-postclean|-pc) after each exp. test, clean build-dir & run-dir" |
echo " (-postclean|-pc) after each exp. test, clean build-dir & run-dir" |
72 |
echo " (-deloutp|-do) delete output files after successful run" |
echo " (-deloutp|-do) delete output files after successful run" |
73 |
echo " (-deldir|-dd) on success, delete the output directory" |
echo " (-deldir|-dd) on success, delete the output directory" |
|
echo " (-ts) provide timing information per timestep" |
|
|
echo " (-papis) provide MFlop/s per timestep using PAPI" |
|
|
echo " (-pcls) provide MFlop/s per timestep using PCL" |
|
74 |
echo |
echo |
75 |
echo "and where STRING can be a whitespace-delimited list" |
echo "and where STRING can be a whitespace-delimited list" |
76 |
echo "such as:" |
echo "such as:" |
132 |
echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2 |
echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2 |
133 |
fi |
fi |
134 |
if [ -r $1/$4/$OUTPUTFILE ]; then |
if [ -r $1/$4/$OUTPUTFILE ]; then |
135 |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | nl > ${TMP}a.txt |
136 |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
lncntA=`wc -l ${TMP}a.txt | awk '{print $1}' ` |
137 |
if [ $lncntA -lt 2 ]; then |
if [ $lncntA -lt 2 ]; then |
138 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
139 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
140 |
fi |
fi |
141 |
rm -f tmp1.txt ; return 99 |
rm -f ${TMP}a.txt ; return 99 |
142 |
fi |
fi |
143 |
else |
else |
144 |
echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2 |
echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2 |
147 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
148 |
echo testoutput_var: grep "$2" $1/$5 1>&2 |
echo testoutput_var: grep "$2" $1/$5 1>&2 |
149 |
fi |
fi |
150 |
grep "$2" $1/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
grep "$2" $1/$5 | sed 's/.*=//' | nl > ${TMP}b.txt |
151 |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l ${TMP}b.txt | awk '{print $1}' ` |
152 |
if [ $lncntB -lt 2 ]; then |
if [ $lncntB -lt 2 ]; then |
153 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
154 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
155 |
fi |
fi |
156 |
rm -f tmp1.txt tmp2.txt ; return 99 |
rm -f ${TMP}a.txt ${TMP}b.txt ; return 99 |
157 |
fi |
fi |
158 |
if [ $lncntA -ne $lncntB ]; then |
if [ $lncntA -ne $lncntB ]; then |
159 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
160 |
echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
161 |
fi |
fi |
162 |
rm -f tmp1.txt tmp2.txt ; return 99 |
rm -f ${TMP}a.txt ${TMP}b.txt ; return 99 |
163 |
fi |
fi |
164 |
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
has_nan=`cat ${TMP}a.txt | grep -i nan | wc -l` |
165 |
if [ $has_nan -gt 0 ] ; then |
if [ $has_nan -gt 0 ] ; then |
166 |
echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
167 |
rm -f tmp1.txt tmp2.txt ; return 99 |
rm -f ${TMP}a.txt ${TMP}b.txt ; return 99 |
168 |
fi |
fi |
169 |
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
has_inf=`cat ${TMP}a.txt | grep -i inf | wc -l` |
170 |
if [ $has_inf -gt 0 ] ; then |
if [ $has_inf -gt 0 ] ; then |
171 |
echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
172 |
rm -f tmp1.txt tmp2.txt ; return 99 |
rm -f ${TMP}a.txt ${TMP}b.txt ; return 99 |
173 |
fi |
fi |
174 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
175 |
echo testoutput_var: join tmp1.txt tmp2.txt 1>&2 |
echo testoutput_var: join ${TMP}a.txt ${TMP}b.txt 1>&2 |
176 |
fi |
fi |
177 |
join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
178 |
|
join ${TMP}a.txt ${TMP}b.txt | awk '{print $1 " " $2 " " $3}' | sed -e 's|:||g' > ${TMP}c.txt |
179 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
180 |
echo testoutput_var: compare_lines 1>&2 |
echo testoutput_var: compare_lines 1>&2 |
181 |
fi |
fi |
182 |
if [ $verbose -gt 1 ]; then |
if [ $verbose -gt 1 ]; then |
183 |
cat tmp3.txt 1>&2 |
cat ${TMP}c.txt 1>&2 |
184 |
fi |
fi |
185 |
echo "-1" >> tmp3.txt |
echo "-1" >> ${TMP}c.txt |
186 |
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
digits_of_similarity=`./tr_cmpnum < ${TMP}c.txt` |
|
cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
|
|
digits_of_similarity=`./tr_cmpnum < tmp4.txt` |
|
187 |
if [ $digits_of_similarity -eq 99 ]; then |
if [ $digits_of_similarity -eq 99 ]; then |
188 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
189 |
echo testoutput_var: No comparison was available for \"$3\" 1>&2 |
echo testoutput_var: No comparison was available for \"$3\" 1>&2 |
194 |
echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2 |
echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2 |
195 |
fi |
fi |
196 |
fi |
fi |
197 |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
rm -f ${TMP}a.txt ${TMP}b.txt ${TMP}c.txt |
198 |
|
|
199 |
return $digits_of_similarity |
return $digits_of_similarity |
200 |
} |
} |
270 |
allargs="" |
allargs="" |
271 |
for xx in $listVar |
for xx in $listVar |
272 |
do |
do |
273 |
case $xx in |
#ii=`echo $xx | sed 's/^pt[0-9][0-9]*..$/XXX/'` #- any ptr number |
274 |
|
ii=`echo $xx | sed 's/^pt[1-9]..$/XXX/'` #- 1 to 9 ptr number |
275 |
|
if test $ii != 'XXX' ; then |
276 |
|
#- all except ptracer stats: |
277 |
|
case $xx in |
278 |
'PS') if [ $debug -gt 0 ] |
'PS') if [ $debug -gt 0 ] |
279 |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
280 |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $refoutp ; yy=$? |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $refoutp ; yy=$? |
301 |
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $refoutp ; yy=$? ;; |
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $refoutp ; yy=$? ;; |
302 |
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $refoutp ; yy=$? ;; |
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $refoutp ; yy=$? ;; |
303 |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $refoutp ; yy=$? ;; |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $refoutp ; yy=$? ;; |
|
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $refoutp ; yy=$? ;; |
|
|
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $refoutp ; yy=$? ;; |
|
|
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $refoutp ; yy=$? ;; |
|
|
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $refoutp ; yy=$? ;; |
|
304 |
'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $refoutp ; yy=$? ;; |
'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $refoutp ; yy=$? ;; |
305 |
'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $refoutp ; yy=$? ;; |
'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $refoutp ; yy=$? ;; |
306 |
'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $refoutp ; yy=$? ;; |
'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $refoutp ; yy=$? ;; |
324 |
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $refoutp ; yy=$? ;; |
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $refoutp ; yy=$? ;; |
325 |
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $refoutp ; yy=$? ;; |
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $refoutp ; yy=$? ;; |
326 |
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $refoutp ; yy=$? ;; |
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $refoutp ; yy=$? ;; |
327 |
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $refoutp ; yy=$? ;; |
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Glob-ave" $2 $refoutp ; yy=$? ;; |
328 |
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $refoutp ; yy=$? ;; |
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South-av" $2 $refoutp ; yy=$? ;; |
329 |
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $refoutp ; yy=$? ;; |
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North-av" $2 $refoutp ; yy=$? ;; |
330 |
|
'HthMxS') testoutput_var $1 "thSI_IceH_max_S" "thSIc H South-max" $2 $refoutp ; yy=$? ;; |
331 |
|
'HthMxN') testoutput_var $1 "thSI_IceH_max_N" "thSIc H North-max" $2 $refoutp ; yy=$? ;; |
332 |
|
'sbo_M') testoutput_var $1 "sbo_mass" "SBO mass" $2 $refoutp ; yy=$? ;; |
333 |
|
'sboFW') testoutput_var $1 "sbo_mass_fw" "SBO m-FW" $2 $refoutp ; yy=$? ;; |
334 |
|
'sboAc') testoutput_var $1 "sbo_zoamc" "SBO AM-C" $2 $refoutp ; yy=$? ;; |
335 |
|
'sboAp') testoutput_var $1 "sbo_zoamp" "SBO AM-P" $2 $refoutp ; yy=$? ;; |
336 |
|
'StrmIc') testoutput_var $1 "STREAMICE_FP_ERR" "StreamIce Solver" $2 $refoutp ; yy=$? ;; |
337 |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
338 |
esac |
esac |
339 |
|
else |
340 |
|
#- ptracers stats: |
341 |
|
nn=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
342 |
|
ii=`echo $xx | sed 's/^pt[0-9]*//'` |
343 |
|
case $ii in |
344 |
|
'mn') testoutput_var $1 "trcstat_ptracer0"$nn"_min" "p0"$nn"_min" $2 $refoutp ; yy=$? ;; |
345 |
|
'mx') testoutput_var $1 "trcstat_ptracer0"$nn"_max" "p0"$nn"_max" $2 $refoutp ; yy=$? ;; |
346 |
|
'av') testoutput_var $1 "trcstat_ptracer0"$nn"_mean" "p0"$nn"_mean" $2 $refoutp ; yy=$? ;; |
347 |
|
'sd') testoutput_var $1 "trcstat_ptracer0"$nn"_sd" "p0"$nn"_StDv" $2 $refoutp ; yy=$? ;; |
348 |
|
esac |
349 |
|
fi |
350 |
if test $xx = $sVar |
if test $xx = $sVar |
351 |
then allargs="$allargs > $yy <" |
then allargs="$allargs > $yy <" |
352 |
else allargs="$allargs $yy" |
else allargs="$allargs $yy" |
381 |
if test "x$MKDEPEND" != x ; then |
if test "x$MKDEPEND" != x ; then |
382 |
command="$command -makedepend=$MKDEPEND" |
command="$command -makedepend=$MKDEPEND" |
383 |
fi |
fi |
384 |
if test $KIND = 1 -o $KIND = 2 ; then |
if test $KIND = 4 ; then |
385 |
command="$command --mods=../code_ad" |
command="$command -oad -mods=../$code_dir" |
|
elif test $KIND = 4 ; then |
|
|
command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'" |
|
386 |
else |
else |
387 |
command="$command -mods=../code" |
command="$command -mods=../$code_dir" |
388 |
fi |
fi |
389 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
390 |
command="$command -optfile=$OPTFILE" |
command="$command -optfile=$OPTFILE" |
411 |
if test "x$EXTRFLG" != x ; then |
if test "x$EXTRFLG" != x ; then |
412 |
command="$command -extra_flag $EXTRFLG" |
command="$command -extra_flag $EXTRFLG" |
413 |
fi |
fi |
414 |
|
if test "x$NOCATAD" = xt ; then |
415 |
|
command="$command -nocat4ad" |
416 |
|
fi |
417 |
if test "x$TS" = xt ; then |
if test "x$TS" = xt ; then |
418 |
command="$command -ts" |
command="$command -ts" |
419 |
fi |
fi |
444 |
makeclean() |
makeclean() |
445 |
{ |
{ |
446 |
# makeclean directory |
# makeclean directory |
447 |
if test "x$NODEPEND" = xf ; then rm -f $1/make.tr_log ; fi |
if test "x$NOGENMAKE" = xf ; then rm -f $1/make.tr_log ; fi |
448 |
if test "x$NOCLEAN" = xt ; then |
if test "x$NOCLEAN" = xt ; then |
449 |
echo "make Clean skipped!" |
echo "make Clean skipped!" |
450 |
else |
else |
476 |
if test "x$NOCLEAN" = xt ; then |
if test "x$NOCLEAN" = xt ; then |
477 |
echo "run_clean skipped!" |
echo "run_clean skipped!" |
478 |
else |
else |
479 |
( |
( |
480 |
cd $1; |
cd $1; |
481 |
printf 'clean run-dir ... ' |
printf 'clean run-dir ... ' |
482 |
# part of what is done after "make clean" when doing "make CLEAN" |
# part of what is done after "make clean" when doing "make CLEAN" |
483 |
find . -name "*.meta" -exec rm {} \; |
find . -name "*.meta" -exec rm {} \; |
484 |
find . -name "*.data" -exec rm {} \; |
find . -name "*.data" -exec rm {} \; |
485 |
find . -name "fort.*" -exec rm {} \; |
find . -name "fort.*" -exec rm {} \; |
486 |
find . -type l -exec rm {} \; |
find . -type l -exec rm {} \; |
487 |
#- should remove executable only if sym-link (alredy done above) |
#- should remove executable only if sym-link (already done above) |
488 |
rm -f $RUNLOG *.txt STD* w2_tile_topology.????.log *diagnostics.log datetime |
rm -f $RUNLOG *.txt STDOUT.* STDERR.* *diagnostics.log *.[0-9][0-9][0-9][0-9].log |
489 |
rm -rf mnc_test_* |
rm -f datetime costfinal divided.ctrl snapshot* output_adm.*.diva_* |
490 |
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
491 |
echo successful |
rm -f oad_cp.[0-9][0-9][0-9].????? |
492 |
exit 0 |
rm -rf mnc_test_* |
493 |
) |
echo successful |
494 |
|
exit 0 |
495 |
|
) |
496 |
fi |
fi |
497 |
} |
} |
498 |
|
|
535 |
else |
else |
536 |
cd $1; |
cd $1; |
537 |
if test -r Makefile ; then |
if test -r Makefile ; then |
538 |
printf 'make ... ' |
if test "x$MKSMALLF" = xt ; then |
539 |
if test "x$REPLMAKE" = x ; then |
printf 'make small_f ... ' |
540 |
$MAKE $TARG >> make.tr_log 2>&1 |
$MAKE_CMD small_f >> make.tr_log 2>&1 |
541 |
else |
RETVAL=$? |
542 |
$REPLMAKE $TARG >> make.tr_log 2>&1 |
if test "x$RETVAL" != x0 ; then |
543 |
|
tail make.tr_log |
544 |
|
echo failed |
545 |
|
cp genmake.log genmake.tr_log $CDIR |
546 |
|
tail -$NBLINES_MKLOG make.tr_log > $CDIR"/make.tr_log_tail" |
547 |
|
rm -f $EXECUTABLE |
548 |
|
mk_fail=1 |
549 |
|
else |
550 |
|
echo successful |
551 |
|
fi |
552 |
fi |
fi |
553 |
|
printf 'make ... ' |
554 |
|
$MAKE_CMD $TARG >> make.tr_log 2>&1 |
555 |
RETVAL=$? |
RETVAL=$? |
556 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
557 |
tail make.tr_log |
tail make.tr_log |
569 |
fi |
fi |
570 |
fi |
fi |
571 |
if test $KIND = 1 -a -f taf_ftl.log ; then |
if test $KIND = 1 -a -f taf_ftl.log ; then |
572 |
head -1 taf_ftl.log >> $CDIR"/summary.txt" |
head -1 taf_ftl.log >> $CDIR"/summary.txt" |
573 |
fi |
fi |
574 |
if test $KIND = 2 -a -f taf_ad.log ; then |
if test $KIND = 2 -a -f taf_ad.log ; then |
575 |
head -1 taf_ad.log >> $CDIR"/summary.txt" |
head -1 taf_ad.log >> $CDIR"/summary.txt" |
576 |
nerr=`grep -c 'TAF *.* ERROR ' taf_ad.log` |
nerr=`grep -c 'TAF *.* ERROR ' taf_ad.log` |
577 |
nwar=`grep -c 'TAF RECOMPUTATION *.* WARNING ' taf_ad.log` |
nwar=`grep -c 'TAF RECOMPUTATION *.* WARNING ' taf_ad.log` |
578 |
echo " TAF reports $nerr Errors and $nwar Recomputation Warnings" \ |
if test -f taf_output ; then |
579 |
|
n2er=`grep -c 'TAF *.* ERROR ' taf_output` |
580 |
|
n3er=`grep -c '\*ERROR\* ' taf_output` |
581 |
|
nerr=`expr $nerr + $n2er + $n3er` |
582 |
|
fi |
583 |
|
echo " TAF reports $nerr Errors and $nwar Recomputation Warnings" \ |
584 |
>> $CDIR"/summary.txt" |
>> $CDIR"/summary.txt" |
585 |
fi |
fi |
586 |
if test $mk_fail != 0 ; then return $mk_fail ; fi |
if test $mk_fail != 0 ; then return $mk_fail ; fi |
799 |
if test "x$MPI" != x0 ; then |
if test "x$MPI" != x0 ; then |
800 |
#- adjust the MPI run command with the right number of Procs |
#- adjust the MPI run command with the right number of Procs |
801 |
#echo '' ; echo " COMMAND='$COMMAND'" |
#echo '' ; echo " COMMAND='$COMMAND'" |
802 |
COMMAND=`echo $COMMAND | sed "s/ TR_NPROC / $LOC_NPROC /"` |
COMMAND=`echo $COMMAND | sed "s/ TR_NPROC/ $LOC_NPROC/"` |
803 |
if test "x$MPI_MFILE" != x ; then |
if test "x$MPI_MFILE" != x ; then |
804 |
COMMAND=`echo $COMMAND | sed "s/ TR_MFILE / ..\/..\/$LOC_MFILE /"` |
COMMAND=`echo $COMMAND | sed "s/ TR_MFILE / ..\/..\/$LOC_MFILE /"` |
805 |
fi |
fi |
827 |
# output do not exist or is older than executable: |
# output do not exist or is older than executable: |
828 |
rm -f $OUTPUTFILE $RUNLOG ; touch $RUNLOG |
rm -f $OUTPUTFILE $RUNLOG ; touch $RUNLOG |
829 |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
830 |
|
#- Divided Adjoint Run: |
831 |
|
# get the number of additional runs (add_DIVA_runs) from file "run_ADM_DIVA" |
832 |
|
if test $KIND = 2 -a -f run_ADM_DIVA ; then |
833 |
|
adm_diva_nb=`sed -n '/^ *add_DIVA_runs\>.*=/p' run_ADM_DIVA | sed 's/ //g'` |
834 |
|
echo " Divided Adjoint Run: $adm_diva_nb" >> $RUNLOG |
835 |
|
eval "let $adm_diva_nb" |
836 |
|
if [ $add_DIVA_runs -ge 1 ] ; then |
837 |
|
rm -f costf* divided.ctrl snapshot* |
838 |
|
echo -n "(add_DIVA_runs=$add_DIVA_runs) ... " |
839 |
|
for ii in `seq 1 $add_DIVA_runs` ; do |
840 |
|
( eval $COMMAND ) >> $RUNLOG 2>&1 |
841 |
|
echo " additional DIVA run # $ii : done" >> $RUNLOG |
842 |
|
mv -f $OUTPUTFILE ${OUTPUTFILE}.diva_${ii} |
843 |
|
done |
844 |
|
fi |
845 |
|
fi |
846 |
|
#- special DIVA processing ends here |
847 |
( eval $COMMAND ) >> $RUNLOG 2>&1 |
( eval $COMMAND ) >> $RUNLOG 2>&1 |
848 |
RETVAL=$? |
RETVAL=$? |
849 |
ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'` |
ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'` |
865 |
if test -f $OUTPUTFILE ; then |
if test -f $OUTPUTFILE ; then |
866 |
grep '(PID\.TID 0000\.0001) n.. =' $OUTPUTFILE \ |
grep '(PID\.TID 0000\.0001) n.. =' $OUTPUTFILE \ |
867 |
| sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
| sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
868 |
grep -A3 'Seconds in section "ALL' $OUTPUTFILE \ |
# grep -A3 'Seconds in section "ALL' $OUTPUTFILE \ |
869 |
| sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
# | sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
870 |
|
# some implementations of grep cannot do contextual searches so we |
871 |
|
# replace the above with a sed command |
872 |
|
cat $OUTPUTFILE | sed -n '/Seconds in section "ALL/{N |
873 |
|
N |
874 |
|
N |
875 |
|
p |
876 |
|
}' | sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
877 |
fi |
fi |
878 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
879 |
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
975 |
fi |
fi |
976 |
fi |
fi |
977 |
printf ' %s' $nm |
printf ' %s' $nm |
978 |
|
if test $KIND = 2 ; then |
979 |
|
#-- apppend taf repport summary: |
980 |
|
tafrep=`grep -c '^ TAF reports ' $CDIR/summary.txt` |
981 |
|
if test $tafrep = 1 ; then |
982 |
|
grep '^ TAF reports ' $CDIR/summary.txt | awk '{printf " (e=%i, w=%i)",$3,$6}' |
983 |
|
fi |
984 |
|
fi |
985 |
printf '\n' |
printf '\n' |
986 |
|
|
987 |
} |
} |
1067 |
MPACKDIR="../tools/mpack-1.6" |
MPACKDIR="../tools/mpack-1.6" |
1068 |
HAVE_MPACK= |
HAVE_MPACK= |
1069 |
MPACK= |
MPACK= |
1070 |
|
SENDCMD= |
1071 |
|
SAVDIR='.' |
1072 |
COMMAND= |
COMMAND= |
1073 |
MKDEPEND= |
MKDEPEND= |
1074 |
if test "x$MAKE" = x ; then |
if test "x$MAKE" = x ; then |
1075 |
MAKE=make |
MAKE=make |
1076 |
fi |
fi |
1077 |
REPLMAKE= |
MAKE_CMD= |
1078 |
if test "x$CC" = x ; then |
if test "x$CC" = x ; then |
1079 |
CC=cc |
CC=cc |
1080 |
fi |
fi |
1087 |
DELDIR= |
DELDIR= |
1088 |
USE_R4= |
USE_R4= |
1089 |
EXTRFLG= |
EXTRFLG= |
1090 |
|
NOCATAD= |
1091 |
|
MKSMALLF= |
1092 |
|
|
1093 |
#- type of testing (KIND): |
#- type of testing (KIND): |
1094 |
# KIND=0 : forward (= default) ; KIND=1 : Tangent Linear with TAF ; |
# KIND=0 : forward (= default) ; KIND=1 : Tangent Linear with TAF ; |
1126 |
-mpackdir | --mpackdir | -mpd | --mpd) ac_prev=MPACKDIR ;; |
-mpackdir | --mpackdir | -mpd | --mpd) ac_prev=MPACKDIR ;; |
1127 |
-mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*) MPACKDIR=$ac_optarg ;; |
-mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*) MPACKDIR=$ac_optarg ;; |
1128 |
|
|
1129 |
|
-send | --send ) ac_prev=SENDCMD ;; |
1130 |
|
-send=* | --send=* ) SENDCMD=$ac_optarg ;; |
1131 |
|
-savdir | --savdir | -sd | --sd ) ac_prev=SAVDIR ;; |
1132 |
|
-savdir=* | --savdir=* | -sd=* | --sd=* ) SAVDIR=$ac_optarg ;; |
1133 |
|
|
1134 |
-tdir | --tdir | -t | --t) ac_prev=TESTDIRS ;; |
-tdir | --tdir | -t | --t) ac_prev=TESTDIRS ;; |
1135 |
-tdir=* | --tdir=* | -t=* | --t=*) TESTDIRS=$ac_optarg ;; |
-tdir=* | --tdir=* | -t=* | --t=*) TESTDIRS=$ac_optarg ;; |
1136 |
-skipdir | --skipdir | -skd | --skd) ac_prev=SKIPDIRS ;; |
-skipdir | --skipdir | -skd | --skd) ac_prev=SKIPDIRS ;; |
1148 |
-make | --make | -m | --m) ac_prev=MAKE ;; |
-make | --make | -m | --m) ac_prev=MAKE ;; |
1149 |
-make=* | --make=* | -m=* | --m=*) MAKE=$ac_optarg ;; |
-make=* | --make=* | -m=* | --m=*) MAKE=$ac_optarg ;; |
1150 |
|
|
1151 |
-repl_mk | --repl_mk ) ac_prev=REPLMAKE ;; |
-repl_mk | --repl_mk ) ac_prev=MAKE_CMD ;; |
1152 |
-repl_mk=* | --repl_mk=*) REPLMAKE=$ac_optarg ;; |
-repl_mk=* | --repl_mk=*) MAKE_CMD=$ac_optarg ;; |
1153 |
|
|
1154 |
-odir | --odir) ac_prev=OUTDIR ;; |
-odir | --odir) ac_prev=OUTDIR ;; |
1155 |
-odir=* | --odir=*) OUTDIR=$ac_optarg ;; |
-odir=* | --odir=*) OUTDIR=$ac_optarg ;; |
1197 |
-oad) if test $KIND = 0 ; then KIND=4 ; NODEPEND=t ; else |
-oad) if test $KIND = 0 ; then KIND=4 ; NODEPEND=t ; else |
1198 |
echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage |
echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage |
1199 |
fi ;; |
fi ;; |
1200 |
|
-ncad) NOCATAD=t ;; |
1201 |
|
-small_f) MKSMALLF=t ;; |
1202 |
|
|
1203 |
-ieee) echo "Warning: ignore option '-ieee' (already the default)" |
-ieee) echo "Warning: ignore option '-ieee' (already the default)" |
1204 |
printf " ... " ;; |
printf " ... " ;; |
1218 |
|
|
1219 |
-ts) TS=t;; |
-ts) TS=t;; |
1220 |
-papis) PAPIS=t;; |
-papis) PAPIS=t;; |
1221 |
-pcls) PCL=t;; |
-pcls) PCLS=t;; |
1222 |
|
|
1223 |
-*) echo "Error: unrecognized option: "$ac_option |
-*) echo "Error: unrecognized option: "$ac_option |
1224 |
usage ;; |
usage ;; |
1234 |
NOCLEAN=t |
NOCLEAN=t |
1235 |
NODEPEND=t |
NODEPEND=t |
1236 |
fi |
fi |
1237 |
|
if test "x$MAKE_CMD" = x ; then MAKE_CMD=$MAKE ; fi |
1238 |
|
|
1239 |
#- check length of MPI machine file: |
#- check length of MPI machine file: |
1240 |
if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then |
if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then |
1273 |
ref_outp="output_oadm.txt" |
ref_outp="output_oadm.txt" |
1274 |
EXECUTABLE="mitgcmuv_ad" |
EXECUTABLE="mitgcmuv_ad" |
1275 |
else |
else |
|
if test "x$JOBS" != x ; then TARG="-j $JOBS $TARG" ; fi |
|
1276 |
code_dir=code |
code_dir=code |
1277 |
inputdir=input |
inputdir=input |
1278 |
ref_outp="output.txt" |
ref_outp="output.txt" |
1279 |
EXECUTABLE="mitgcmuv" |
EXECUTABLE="mitgcmuv" |
1280 |
fi |
fi |
1281 |
|
if test "x$JOBS" != x ; then TARG="-j $JOBS $TARG" ; fi |
1282 |
|
|
1283 |
xx=`echo $TESTDIRS | awk '{print $1}'` |
xx=`echo $TESTDIRS | awk '{print $1}'` |
1284 |
if test "x$TESTDIRS" = x ; then |
if test "x$TESTDIRS" = x ; then |
1325 |
if test $count = 1 ; then echo "" ; echo -n " ... " ; fi |
if test $count = 1 ; then echo "" ; echo -n " ... " ; fi |
1326 |
#echo 'TESTDIRS='${TESTDIRS}'<' |
#echo 'TESTDIRS='${TESTDIRS}'<' |
1327 |
|
|
|
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
|
|
OPTFILE=$MITGCM_OF |
|
|
fi |
|
|
|
|
1328 |
LOC_MFILE='tr_mpi_mfile' |
LOC_MFILE='tr_mpi_mfile' |
1329 |
RUNLOG="run.tr_log" |
RUNLOG="run.tr_log" |
1330 |
OUTPUTFILE=$ref_outp |
if test "x$MPI" = x0 ; then |
1331 |
if test "x$COMMAND" = x ; then |
OUTPUTFILE=$ref_outp |
1332 |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
if test "x$COMMAND" = x ; then COMMAND="./$EXECUTABLE > $OUTPUTFILE" ; fi |
1333 |
fi |
else |
1334 |
if test "x$MPI" != x0 ; then |
OUTPUTFILE="STDOUT.0000" |
1335 |
OUTPUTFILE="STDOUT.0000" |
if test "x$COMMAND" = x ; then COMMAND="mpirun -np TR_NPROC ./$EXECUTABLE" ; fi |
1336 |
fi |
fi |
1337 |
|
|
1338 |
echo "OK (COMMAND= $COMMAND )" |
echo "OK (COMMAND='$COMMAND')" |
1339 |
|
|
1340 |
|
#TMP=./tr_$$ |
1341 |
|
#- try to put temporary files in system-local /tmp dir |
1342 |
|
TMP=/tmp/tr_${USER}_$$ |
1343 |
|
touch $TMP ; retVal=$? |
1344 |
|
if [ $retVal -eq 0 ] ; then |
1345 |
|
if test ! -r $TMP ; then TMP=./tr_$$ ; fi |
1346 |
|
else |
1347 |
|
TMP=./tr_$$ |
1348 |
|
fi |
1349 |
|
rm -f $TMP |
1350 |
|
if [ $verbose -gt 1 ]; then echo " temp files: $TMP" ; fi |
1351 |
|
|
1352 |
# set the Default List of output variables to be checked: |
# set the Default List of output variables to be checked: |
1353 |
# (use default or load experiment-specific list from file "tr_checklist") |
# (use default or load experiment-specific list from file "tr_checklist") |
1377 |
fi |
fi |
1378 |
|
|
1379 |
# build the mpack utility (if ADDRESSES = NONE, do it to test the build) |
# build the mpack utility (if ADDRESSES = NONE, do it to test the build) |
1380 |
if test "x$ADDRESSES" = x ; then |
if test "x$ADDRESSES" = x -o "x$SENDCMD" != x ; then |
1381 |
echo "skipping mpack build" |
echo "skipping mpack build" |
1382 |
else |
else |
1383 |
build_mpack |
build_mpack |
1384 |
|
if test "x$HAVE_MPACK" = xt ; then SENDCMD=$MPACK ; fi |
1385 |
fi |
fi |
1386 |
|
|
1387 |
# Create a uniquely named directory to store results |
# Create a uniquely named directory to store results |
1388 |
CMDLINE=$0 |
CMDLINE=$0 |
1389 |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
1390 |
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" ; else |
1391 |
else CMDLINE="$CMDLINE '$xx'" ; fi |
nb=`echo $xx | grep -c '='` |
1392 |
|
if test $nb = 0 ; then CMDLINE="$CMDLINE '$xx'" |
1393 |
|
else yy=`echo "$xx'" | sed "s/=/='/"` ; |
1394 |
|
CMDLINE="$CMDLINE $yy" ; fi |
1395 |
|
fi |
1396 |
done |
done |
|
#for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done |
|
1397 |
MACH=`hostname` |
MACH=`hostname` |
1398 |
UNAMEA=`uname -a` |
UNAMEA=`uname -a` |
1399 |
DATE=`date +%Y%m%d` |
DATE=`date +%Y%m%d` |
1401 |
if test "x$OUTDIR" != x ; then |
if test "x$OUTDIR" != x ; then |
1402 |
BASE="tr_"$OUTDIR"_"$DATE"_" |
BASE="tr_"$OUTDIR"_"$DATE"_" |
1403 |
else |
else |
1404 |
short_name=`hostname | sed 's/\..*$//'` |
#short_name=`hostname -s | tr '[:upper:]' '[:lower:]'` |
1405 |
|
# hostname -s is not universal (does work on AIX system) |
1406 |
|
short_name=`hostname | sed 's/\..*$//' | tr '[:upper:]' '[:lower:]'` |
1407 |
BASE="tr_"$short_name"_"$DATE"_" |
BASE="tr_"$short_name"_"$DATE"_" |
1408 |
fi |
fi |
1409 |
DNUM=0 |
DNUM=0 |
1440 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1441 |
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
1442 |
else |
else |
1443 |
echo | tee $SUMMARY |
echo | tee -a $SUMMARY |
1444 |
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY |
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee -a $SUMMARY |
1445 |
exit 1 |
exit 1 |
1446 |
fi |
fi |
1447 |
else |
else |
1468 |
else |
else |
1469 |
line_0=`printf '%s %2i' 'default ' $MATCH_CRIT` |
line_0=`printf '%s %2i' 'default ' $MATCH_CRIT` |
1470 |
if test $KIND = 1 ; then |
if test $KIND = 1 ; then |
1471 |
echo "TANGLIN=true" >> $SUMMARY |
#echo "TANGLIN=true" >> $SUMMARY |
1472 |
|
echo "TangLin generated by TAF" >> $SUMMARY |
1473 |
|
elif test $KIND = 3 ; then |
1474 |
|
echo "TangLin generated by OpenAD" >> $SUMMARY |
1475 |
|
elif test $KIND = 2 ; then |
1476 |
|
#echo "ADJOINT=true" >> $SUMMARY |
1477 |
|
echo "Adjoint generated by TAF" >> $SUMMARY |
1478 |
|
else |
1479 |
|
echo "Adjoint generated by OpenAD" >> $SUMMARY |
1480 |
|
fi |
1481 |
|
if test $KIND = 1 -o $KIND = 3 ; then |
1482 |
line_1="G D M C T F" |
line_1="G D M C T F" |
1483 |
line_2="e p a R o L D" |
line_2="e p a R o L D" |
1484 |
else |
else |
|
echo "ADJOINT=true" >> $SUMMARY |
|
1485 |
line_1="G D M C A F" |
line_1="G D M C A F" |
1486 |
line_2="e p a R o d D" |
line_2="e p a R o d D" |
1487 |
fi |
fi |
1521 |
rm -f $EXECUTABLE *.bak |
rm -f $EXECUTABLE *.bak |
1522 |
rm -f genmake_state genmake_*optfile genmake.log |
rm -f genmake_state genmake_*optfile genmake.log |
1523 |
rm -f SIZE.h.mpi genmake.tr_log make.tr_log |
rm -f SIZE.h.mpi genmake.tr_log make.tr_log |
1524 |
|
rm -rf mpi_headers |
1525 |
) |
) |
1526 |
if test -d $dir/$rundir/CVS ; then |
if test -d $dir/$rundir/CVS ; then |
1527 |
echo -n ' --- dir:' $dir/$rundir ': ' |
echo -n ' --- dir:' $dir/$rundir ': ' |
1606 |
# Check whether there are "extra runs" for this testdir |
# Check whether there are "extra runs" for this testdir |
1607 |
extra_runs= |
extra_runs= |
1608 |
if test "x$NORUN" = xf ; then |
if test "x$NORUN" = xf ; then |
1609 |
ex_run_dirs=`( cd $dir ; echo $inputdir.* )` |
ex_run_dirs=`( cd $dir ; ls -d $inputdir.* 2> /dev/null )` |
1610 |
fi |
fi |
1611 |
#echo "ex_run_dirs='$ex_run_dirs'" |
#echo "ex_run_dirs='$ex_run_dirs'" |
1612 |
for exd in $ex_run_dirs ; do |
for exd in $ex_run_dirs ; do |
1613 |
name=`echo $exd | sed -e "s/$inputdir\.//"` |
name=`echo $exd | sed -e "s/$inputdir\.//"` |
1614 |
refExOut=`echo $ref_outp | sed "s/\./.${name}./"` |
refExOut=`echo $ref_outp | sed "s/\./.${name}./"` |
1615 |
outf="$dir/results/$refExOut" |
outf="$dir/results/$refExOut" |
|
#if test -f $outf -a -r $outf ; then |
|
1616 |
if test -r $outf -o -r ${outf}.gz ; then |
if test -r $outf -o -r ${outf}.gz ; then |
1617 |
if test "x$MULTI_THREAD" = "xt" ; then |
if test "x$MULTI_THREAD" = "xt" ; then |
1618 |
if test -r $dir"/"$exd"/eedata.mth" ; then |
if test -r $dir"/"$exd"/eedata.mth" ; then |
1696 |
linkdata $dir/$pfxdir.$ex $inputdir.$ex $inputdir |
linkdata $dir/$pfxdir.$ex $inputdir.$ex $inputdir |
1697 |
runmodel $dir/$pfxdir.$ex && run=Y \ |
runmodel $dir/$pfxdir.$ex && run=Y \ |
1698 |
&& results=`testoutput_run $dir $pfxdir.$ex $refExOut` |
&& results=`testoutput_run $dir $pfxdir.$ex $refExOut` |
1699 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir.$ex ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
|
fres="$fres.$ex" |
|
1700 |
echo 1>&2 |
echo 1>&2 |
1701 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1702 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt" |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt" |
1709 |
if test -f $dir/$builddir/Makefile ; then |
if test -f $dir/$builddir/Makefile ; then |
1710 |
mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'` |
mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'` |
1711 |
echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state |
echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state |
1712 |
sed -n '/^# executed by:/,+1 p' $dir/$builddir/Makefile >> $DRESULTS/genmake_state |
# sed -n '/^# executed by:/,+1 p' $dir/$builddir/Makefile >> $DRESULTS/genmake_state |
1713 |
|
# bsd-sed cannot do the above code |
1714 |
|
cat $dir/$builddir/Makefile | \ |
1715 |
|
sed -n '/^# executed by:/{N |
1716 |
|
p |
1717 |
|
}' >> $DRESULTS/genmake_state |
1718 |
echo " $mkOpt" >> $DRESULTS/genmake_state |
echo " $mkOpt" >> $DRESULTS/genmake_state |
1719 |
if test "x$OPTFILE" = xNONE ; then |
if test "x$OPTFILE" = xNONE ; then |
1720 |
eval $mkOpt |
eval $mkOpt |
1721 |
sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\ |
# sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\ |
1722 |
$SUMMARY > tmp.tr_log |
# $SUMMARY > tmp.tr_log |
1723 |
|
# bsd-sed requires a newline after "a\": |
1724 |
|
sed "/^No \"OPTFILE\" was specified ; genmake2/a\\ |
1725 |
|
OPTFILE=${OPTFILE}" $SUMMARY > tmp.tr_log |
1726 |
RETVAL=$? |
RETVAL=$? |
1727 |
if test "x$RETVAL" = x0 ; then rm -f $SUMMARY |
if test "x$RETVAL" = x0 ; then |
1728 |
cp tmp.tr_log $SUMMARY |
cp -f tmp.tr_log $SUMMARY |
|
else rm -f tmp.tr_log |
|
1729 |
fi |
fi |
1730 |
|
rm -f tmp.tr_log |
1731 |
fi |
fi |
1732 |
gmkLog=$dir/$builddir/genmake.log |
gmkLog=$dir/$builddir/genmake.log |
1733 |
if test -r $gmkLog ; then |
if test -r $gmkLog ; then |
1743 |
>> $DRESULTS/genmake_state |
>> $DRESULTS/genmake_state |
1744 |
rm -f tmp.tr_log |
rm -f tmp.tr_log |
1745 |
fi |
fi |
1746 |
echo -n "from '$gmkLog', " >> $DRESULTS/genmake_state |
fi |
1747 |
echo "get NETCDF & LAPACK settings:" >> $DRESULTS/genmake_state |
gmkLog=$dir/$builddir/genmake_state |
1748 |
sed -n '/set HAVE_NETCDF=/p' $gmkLog >> $DRESULTS/genmake_state |
if test -r $gmkLog ; then |
1749 |
sed -n '/set HAVE_LAPACK=/p' $gmkLog >> $DRESULTS/genmake_state |
echo -n "from '$gmkLog', " >> $DRESULTS/genmake_state |
1750 |
|
echo "get genmake settings:" >> $DRESULTS/genmake_state |
1751 |
|
sed -n '/^HAVE_/p' $gmkLog | sed 's/^./ &/' \ |
1752 |
|
>> $DRESULTS/genmake_state |
1753 |
fi |
fi |
1754 |
fi |
fi |
1755 |
fi |
fi |
1774 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
1775 |
echo "No results email was sent." |
echo "No results email was sent." |
1776 |
else |
else |
1777 |
if test "x$HAVE_MPACK" = xt ; then |
if test "x$SENDCMD" != x ; then |
1778 |
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
if [ $verbose -gt 1 ]; then |
1779 |
&& gzip $DRESULTS".tar" \ |
echo " run: $SENDCMD -s MITgcm-test -m 3555000 ${SAVDIR}/${DRESULTS}".tar.gz" $ADDRESSES" |
1780 |
&& $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES |
fi |
1781 |
|
tar -cf ${SAVDIR}/${DRESULTS}".tar" $DRESULTS > /dev/null 2>&1 \ |
1782 |
|
&& gzip ${SAVDIR}/${DRESULTS}".tar" \ |
1783 |
|
&& $SENDCMD -s MITgcm-test -m 3555000 ${SAVDIR}/${DRESULTS}".tar.gz" $ADDRESSES |
1784 |
RETVAL=$? |
RETVAL=$? |
1785 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
1786 |
echo |
echo |
1793 |
echo "An email containing results was sent to the following addresses:" |
echo "An email containing results was sent to the following addresses:" |
1794 |
echo " \"$ADDRESSES\"" |
echo " \"$ADDRESSES\"" |
1795 |
echo |
echo |
1796 |
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
test -f ${SAVDIR}/${DRESULTS}".tar" && rm -f ${SAVDIR}/${DRESULTS}".tar" |
1797 |
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
test -f ${SAVDIR}/${DRESULTS}".tar.gz" && rm -f ${SAVDIR}/${DRESULTS}".tar.gz" |
1798 |
fi |
fi |
1799 |
fi |
fi |
1800 |
fi |
fi |