35 |
echo " (-bash|-b) STRING preferred location of a \"bash\" or" |
echo " (-bash|-b) STRING preferred location of a \"bash\" or" |
36 |
echo " Bourne-compatible \"sh\" shell" |
echo " Bourne-compatible \"sh\" shell" |
37 |
echo " (DEF=\"\" for \"bash\")" |
echo " (DEF=\"\" for \"bash\")" |
38 |
|
echo " (-tlm) perform a Tangent Linear run" |
39 |
echo " (-adm|-ad) perform an adjoint run" |
echo " (-adm|-ad) perform an adjoint run" |
40 |
echo " (-oad) perform an OpenAD adjoint run" |
echo " (-oad) perform an OpenAD adjoint run" |
41 |
echo " (-command|-c) STRING command to run" |
echo " (-command|-c) STRING command to run" |
118 |
# testoutput_var dir s1 label subdir reference_output |
# testoutput_var dir s1 label subdir reference_output |
119 |
# |
# |
120 |
# compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE |
# compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE |
121 |
# with same output from reference file $dir/results/$reference_output |
# with same output from reference file $dir/$reference_output |
122 |
# using search strings s1 and text label |
# using search strings s1 and text label |
123 |
|
|
124 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
131 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
132 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
133 |
fi |
fi |
134 |
return 99 |
rm -f tmp1.txt ; return 99 |
135 |
fi |
fi |
136 |
else |
else |
137 |
echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2 |
echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2 |
138 |
return 99 |
return 99 |
139 |
fi |
fi |
140 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
141 |
echo testoutput_var: grep "$2" $1/results/$5 1>&2 |
echo testoutput_var: grep "$2" $1/$5 1>&2 |
142 |
fi |
fi |
143 |
grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
grep "$2" $1/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
144 |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
145 |
if [ $lncntB -lt 2 ]; then |
if [ $lncntB -lt 2 ]; then |
146 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
147 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
148 |
fi |
fi |
149 |
return 99 |
rm -f tmp1.txt tmp2.txt ; return 99 |
150 |
fi |
fi |
151 |
if [ $lncntA -ne $lncntB ]; then |
if [ $lncntA -ne $lncntB ]; then |
152 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
153 |
echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
154 |
fi |
fi |
155 |
return 99 |
rm -f tmp1.txt tmp2.txt ; return 99 |
156 |
fi |
fi |
157 |
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
158 |
if [ $has_nan -gt 0 ] ; then |
if [ $has_nan -gt 0 ] ; then |
159 |
echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
160 |
return 99 |
rm -f tmp1.txt tmp2.txt ; return 99 |
161 |
fi |
fi |
162 |
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
163 |
if [ $has_inf -gt 0 ] ; then |
if [ $has_inf -gt 0 ] ; then |
164 |
echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
165 |
return 99 |
rm -f tmp1.txt tmp2.txt ; return 99 |
166 |
fi |
fi |
167 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
168 |
echo testoutput_var: join tmp1.txt tmp2.txt 1>&2 |
echo testoutput_var: join tmp1.txt tmp2.txt 1>&2 |
199 |
# |
# |
200 |
# test output from 1 run in "directory" |
# test output from 1 run in "directory" |
201 |
# --> same processing for adjoint & forward test |
# --> same processing for adjoint & forward test |
202 |
# default list of output variables to be checked: |
# default list of output variables to be checked: |
203 |
# 1rst : main variable used to decide if it pass or FAIL |
# 1rst : main variable used to decide if it pass or FAIL |
204 |
# others : number of matching digits to be printed in summary.txt |
# others : number of matching digits to be printed in summary.txt |
205 |
listChk=$DEF_CHECK_LIST |
listChk=$DEF_CHECK_LIST |
206 |
# load experiment-specific list from file "tr_checklist" (if it exist) |
# load experiment-specific list from file "tr_checklist" (if it exist) |
207 |
if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi |
if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi |
208 |
sVar=`echo $listChk | awk '{print $1}'` |
sVar=`echo $listChk | awk '{print $1}'` |
209 |
# remove 1rst var and expand the list: + => min max mean s.d |
# remove 1rst var and expand the list: + => min max mean s.d |
210 |
listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \ |
listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \ |
211 |
| sed 's/+//g' | sed "s/^$sVar//"` |
| sed 's/+//g' | sed "s/^$sVar//"` |
212 |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi |
213 |
# check for ptracer output in reference_output file : |
# set ref.outp file-name and, if compressed, uncompress it into subdir |
214 |
outpref=$1/results/$3 |
refoutp=results/$3 |
215 |
ptr_mon="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
if test ! -r $1/results/$3 ; then |
216 |
ptr_mon="$ptr_mon trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
if test -r $1/results/${3}.gz ; then |
217 |
for ii in $PTRACERS_NUM ; do |
tmpNam1=$3 |
218 |
|
tmpNam2=`echo $tmpNam1 | sed 's/\..*\././'` |
219 |
|
if test "x$tmpNam1" = "x$tmpNam2" ; then |
220 |
|
tmpNam1=`echo $tmpNam2 | sed 's/\./.std./'` |
221 |
|
fi |
222 |
|
refoutp=$2/$tmpNam1 |
223 |
|
if [ $debug -gt 0 ]; then |
224 |
|
echo "testoutput_run: gunzip 'results/$3.gz' into '$refoutp'" 1>&2 |
225 |
|
fi |
226 |
|
gzip -cd $1/results/${3}.gz > $1/$refoutp |
227 |
|
else |
228 |
|
echo "missing reference output file '$3' (.gz) in '$1/results/'" |
229 |
|
fi |
230 |
|
fi |
231 |
|
# check for ptracer output in reference_output file : |
232 |
|
if test $KIND = 0 ; then |
233 |
|
ptr_mon="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
234 |
|
ptr_mon="$ptr_mon trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
235 |
|
for ii in $PTRACERS_NUM ; do |
236 |
ptrfound=0 |
ptrfound=0 |
237 |
for jj in $ptr_mon ; do |
for jj in $ptr_mon ; do |
238 |
name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
239 |
tst=`grep $name $outpref | wc -l | awk '{print $1}'` |
tst=`grep $name $1/$refoutp | wc -l | awk '{print $1}'` |
240 |
if test ! "x$tst" = x0 ; then ptrfound=1 ; fi |
if test ! "x$tst" = x0 ; then ptrfound=1 ; fi |
241 |
done |
done |
242 |
if test $ptrfound = '1' ; then |
if test $ptrfound = '1' ; then |
243 |
eval "HAVE_PTR0"$ii"=t" |
eval "HAVE_PTR0"$ii"=t" |
244 |
else |
else |
245 |
eval "HAVE_PTR0"$ii"=f" |
eval "HAVE_PTR0"$ii"=f" |
|
if test "x$ADM" = x -a "x$OADM" = x; then |
|
246 |
# remove this ptr from the list of output variable to check |
# remove this ptr from the list of output variable to check |
247 |
# echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 |
# echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 |
248 |
listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` |
listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` |
|
fi |
|
249 |
fi |
fi |
250 |
# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' 1>&2 |
# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' 1>&2 |
251 |
done |
done |
252 |
tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'` |
fi |
253 |
if test $tst != 1 ; then |
tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'` |
254 |
if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2 |
if test $tst != 1 ; then |
255 |
else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi |
if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2 |
256 |
echo "==> WARNING: in checked list:" $listVar 1>&2 |
else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi |
257 |
#- put it back once: |
echo "==> WARNING: in checked list:" $listVar 1>&2 |
258 |
listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"` |
#- put it back once: |
259 |
fi |
listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"` |
260 |
|
fi |
261 |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi |
262 |
echo "listVar='$listVar'" >> $locDIR"/summary.txt" |
echo "listVar='$listVar'" >> $locDIR"/summary.txt" |
263 |
#--- |
#--- |
264 |
allargs="" |
allargs="" |
265 |
for xx in $listVar |
for xx in $listVar |
266 |
do |
do |
267 |
case $xx in |
case $xx in |
268 |
'PS') if [ $debug -gt 0 ] |
'PS') if [ $debug -gt 0 ] |
269 |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
270 |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$? |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $refoutp ; yy=$? |
271 |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
272 |
'Cost') testoutput_var $1 "ADM ref_cost_function" "ADM CostFct" $2 $3; yy=$? ;; |
'Cost') testoutput_var $1 "ADM ref_cost_function" "ADM CostFct" $2 $refoutp ; yy=$? ;; |
273 |
'AdGrd') testoutput_var $1 "ADM adjoint_gradient" "ADM Ad Grad" $2 $3; yy=$? ;; |
'AdGrd') testoutput_var $1 "ADM adjoint_gradient" "ADM Ad Grad" $2 $refoutp ; yy=$? ;; |
274 |
'FDGrd') testoutput_var $1 "ADM finite-diff_grad" "ADM FD Grad" $2 $3; yy=$? ;; |
'FDGrd') testoutput_var $1 "ADM finite-diff_grad" "ADM FD Grad" $2 $refoutp ; yy=$? ;; |
275 |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;; |
'tlmCst') testoutput_var $1 "TLM ref_cost_function" "TLM CostFct" $2 $refoutp ; yy=$? ;; |
276 |
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;; |
'tlmGrd') testoutput_var $1 "TLM tangent-lin_grad" "TLM TL Grad" $2 $refoutp ; yy=$? ;; |
277 |
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;; |
'fwdGrd') testoutput_var $1 "TLM finite-diff_grad" "TLM FD Grad" $2 $refoutp ; yy=$? ;; |
278 |
'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;; |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $refoutp ; yy=$? ;; |
279 |
'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;; |
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $refoutp ; yy=$? ;; |
280 |
'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;; |
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $refoutp ; yy=$? ;; |
281 |
'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;; |
'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $refoutp ; yy=$? ;; |
282 |
'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;; |
'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $refoutp ; yy=$? ;; |
283 |
'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;; |
'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $refoutp ; yy=$? ;; |
284 |
'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;; |
'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $refoutp ; yy=$? ;; |
285 |
'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;; |
'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $refoutp ; yy=$? ;; |
286 |
'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;; |
'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $refoutp ; yy=$? ;; |
287 |
'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;; |
'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $refoutp ; yy=$? ;; |
288 |
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;; |
'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $refoutp ; yy=$? ;; |
289 |
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;; |
'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $refoutp ; yy=$? ;; |
290 |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;; |
'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $refoutp ; yy=$? ;; |
291 |
|
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $refoutp ; yy=$? ;; |
292 |
|
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $refoutp ; yy=$? ;; |
293 |
|
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $refoutp ; yy=$? ;; |
294 |
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
295 |
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $refoutp ; yy=$? ;; |
296 |
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
297 |
testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $refoutp ; yy=$? ;; |
298 |
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
299 |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $refoutp ; yy=$? ;; |
300 |
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
301 |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $refoutp ; yy=$? ;; |
302 |
'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; |
'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $refoutp ; yy=$? ;; |
303 |
'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; |
'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $refoutp ; yy=$? ;; |
304 |
'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; |
'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $refoutp ; yy=$? ;; |
305 |
'Qntsd') testoutput_var $1 "forcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; |
'Qntsd') testoutput_var $1 "forcing_qnet_sd" "Qnet Std.Dev" $2 $refoutp ; yy=$? ;; |
306 |
'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;; |
'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $refoutp ; yy=$? ;; |
307 |
'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;; |
'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $refoutp ; yy=$? ;; |
308 |
'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;; |
'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $refoutp ; yy=$? ;; |
309 |
'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;; |
'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $refoutp ; yy=$? ;; |
310 |
'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;; |
'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $refoutp ; yy=$? ;; |
311 |
'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Heff max" $2 $3; yy=$? ;; |
'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Heff max" $2 $refoutp ; yy=$? ;; |
312 |
'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Heff mean" $2 $3; yy=$? ;; |
'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Heff mean" $2 $refoutp ; yy=$? ;; |
313 |
'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Heff StDv" $2 $3; yy=$? ;; |
'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Heff StDv" $2 $refoutp ; yy=$? ;; |
314 |
'uSImn') testoutput_var $1 "seaice_uice_min" "SIce Uice min" $2 $3; yy=$? ;; |
'uSImn') testoutput_var $1 "seaice_uice_min" "SIce Uice min" $2 $refoutp ; yy=$? ;; |
315 |
'uSImx') testoutput_var $1 "seaice_uice_max" "SIce Uice max" $2 $3; yy=$? ;; |
'uSImx') testoutput_var $1 "seaice_uice_max" "SIce Uice max" $2 $refoutp ; yy=$? ;; |
316 |
'uSIav') testoutput_var $1 "seaice_uice_mean" "SIce Uice mean" $2 $3; yy=$? ;; |
'uSIav') testoutput_var $1 "seaice_uice_mean" "SIce Uice mean" $2 $refoutp ; yy=$? ;; |
317 |
'uSIsd') testoutput_var $1 "seaice_uice_sd" "SIce Uice StDv" $2 $3; yy=$? ;; |
'uSIsd') testoutput_var $1 "seaice_uice_sd" "SIce Uice StDv" $2 $refoutp ; yy=$? ;; |
318 |
'vSImn') testoutput_var $1 "seaice_vice_min" "SIce Vice min" $2 $3; yy=$? ;; |
'vSImn') testoutput_var $1 "seaice_vice_min" "SIce Vice min" $2 $refoutp ; yy=$? ;; |
319 |
'vSImx') testoutput_var $1 "seaice_vice_max" "SIce Vice max" $2 $3; yy=$? ;; |
'vSImx') testoutput_var $1 "seaice_vice_max" "SIce Vice max" $2 $refoutp ; yy=$? ;; |
320 |
'vSIav') testoutput_var $1 "seaice_vice_mean" "SIce Vice mean" $2 $3; yy=$? ;; |
'vSIav') testoutput_var $1 "seaice_vice_mean" "SIce Vice mean" $2 $refoutp ; yy=$? ;; |
321 |
'vSIsd') testoutput_var $1 "seaice_vice_sd" "SIce Vice StDv" $2 $3; yy=$? ;; |
'vSIsd') testoutput_var $1 "seaice_vice_sd" "SIce Vice StDv" $2 $refoutp ; yy=$? ;; |
322 |
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;; |
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $refoutp ; yy=$? ;; |
323 |
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;; |
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $refoutp ; yy=$? ;; |
324 |
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;; |
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $refoutp ; yy=$? ;; |
325 |
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;; |
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Glob-ave" $2 $refoutp ; yy=$? ;; |
326 |
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;; |
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South-av" $2 $refoutp ; yy=$? ;; |
327 |
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;; |
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North-av" $2 $refoutp ; yy=$? ;; |
328 |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
'HthMxS') testoutput_var $1 "thSI_IceH_max_S" "thSIc H South-max" $2 $refoutp ; yy=$? ;; |
329 |
esac |
'HthMxN') testoutput_var $1 "thSI_IceH_max_N" "thSIc H North-max" $2 $refoutp ; yy=$? ;; |
330 |
if test $xx = $sVar |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
331 |
then allargs="$allargs > $yy <" |
esac |
332 |
else allargs="$allargs $yy" |
if test $xx = $sVar |
333 |
fi |
then allargs="$allargs > $yy <" |
334 |
done |
else allargs="$allargs $yy" |
335 |
|
fi |
336 |
|
done |
337 |
|
|
338 |
nbVar=`echo $listVar | awk '{print NF}'` |
nbVar=`echo $listVar | awk '{print NF}'` |
339 |
if [ $nbVar -lt $LEN_CHECK_LIST ] ; then |
if [ $nbVar -lt $LEN_CHECK_LIST ] ; then |
340 |
#-- fill line (up to standard length) with dot: |
#-- fill line (up to standard length) with dot: |
341 |
adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'` |
adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'` |
342 |
echo $allargs $adNul |
echo $allargs $adNul |
343 |
else |
else |
344 |
echo $allargs |
echo $allargs |
345 |
fi |
fi |
346 |
# <-- same processing for adjoint & forward test |
# <-- same processing for adjoint & forward test |
363 |
if test "x$MKDEPEND" != x ; then |
if test "x$MKDEPEND" != x ; then |
364 |
command="$command -makedepend=$MKDEPEND" |
command="$command -makedepend=$MKDEPEND" |
365 |
fi |
fi |
366 |
if test "x$ADM" = xt ; then |
if test $KIND = 1 -o $KIND = 2 ; then |
367 |
command="$command --mods=../code_ad" |
command="$command --mods=../code_ad" |
368 |
elif test "x$OADM" = xt ; then |
elif test $KIND = 4 ; then |
369 |
command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'" |
command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'" |
370 |
else |
else |
371 |
command="$command -mods=../code" |
command="$command -mods=../code" |
374 |
command="$command -optfile=$OPTFILE" |
command="$command -optfile=$OPTFILE" |
375 |
fi |
fi |
376 |
if test $OptLev = 1 ; then |
if test $OptLev = 1 ; then |
377 |
command="$command -ieee" |
command="$command -ieee" |
378 |
fi |
fi |
379 |
if test $OptLev = 0 ; then |
if test $OptLev = 0 ; then |
380 |
command="$command -devel" |
command="$command -devel" |
381 |
fi |
fi |
468 |
#- should remove executable only if sym-link (alredy done above) |
#- should remove executable only if sym-link (alredy done above) |
469 |
rm -f $RUNLOG *.txt STD* w2_tile_topology.????.log *diagnostics.log datetime |
rm -f $RUNLOG *.txt STD* w2_tile_topology.????.log *diagnostics.log datetime |
470 |
rm -rf mnc_test_* |
rm -rf mnc_test_* |
471 |
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
472 |
echo successful |
echo successful |
473 |
exit 0 |
exit 0 |
474 |
) |
) |
536 |
mk_fail=2 |
mk_fail=2 |
537 |
fi |
fi |
538 |
fi |
fi |
539 |
if test "x$ADM" = xt -a -f taf_ad.log ; then |
if test $KIND = 1 -a -f taf_ftl.log ; then |
540 |
|
head -1 taf_ftl.log >> $CDIR"/summary.txt" |
541 |
|
fi |
542 |
|
if test $KIND = 2 -a -f taf_ad.log ; then |
543 |
head -1 taf_ad.log >> $CDIR"/summary.txt" |
head -1 taf_ad.log >> $CDIR"/summary.txt" |
544 |
nerr=`grep -c 'TAF *.* ERROR ' taf_ad.log` |
nerr=`grep -c 'TAF *.* ERROR ' taf_ad.log` |
545 |
nwar=`grep -c 'TAF RECOMPUTATION *.* WARNING ' taf_ad.log` |
nwar=`grep -c 'TAF RECOMPUTATION *.* WARNING ' taf_ad.log` |
692 |
( |
( |
693 |
cd $1 ; shift |
cd $1 ; shift |
694 |
echo 'linkdata from dirs:' $* |
echo 'linkdata from dirs:' $* |
695 |
inpMPI=`(cd ../$1 ; find . -name "*.mpi" -print | sed 's:^\./::')` |
inpMPI=`(cd ../$1 ; find . -name "*.mpi" -print | sed 's:^\./::')` |
696 |
for xx in $inpMPI ; do |
for xx in $inpMPI ; do |
697 |
if test -r "../"$1"/"$xx ; then |
if test -r "../"$1"/"$xx ; then |
698 |
# found 1 _mpi sfx file in 1rst input dir and it is readable |
# found 1 _mpi sfx file in 1rst input dir and it is readable |
699 |
yy=`echo $xx | sed 's:\.mpi$::'` |
yy=`echo $xx | sed 's:\.mpi$::'` |
700 |
if test "x$MPI" = "x0" ; then |
if test "x$MPI" = "x0" ; then |
701 |
# not mpi test: remove symbolic link |
# not mpi test: remove symbolic link |
727 |
prevDir='NONE' |
prevDir='NONE' |
728 |
for ldir in $* ; do |
for ldir in $* ; do |
729 |
if test -d "../"$ldir -a $ldir != $prevDir ; then |
if test -d "../"$ldir -a $ldir != $prevDir ; then |
730 |
printf " ldir=${ldir}:" 1>&2 |
printf " ldir=${ldir}:" 1>&2 |
731 |
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
732 |
for i in $files ; do |
for i in $files ; do |
733 |
if test ! -d "../"$ldir/$i ; then |
if test ! -d "../"$ldir/$i ; then |
775 |
else rm -f $EXECUTABLE |
else rm -f $EXECUTABLE |
776 |
fi |
fi |
777 |
fi |
fi |
778 |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
779 |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp |
780 |
ln -sf "../"$builddir"/"$EXECUTABLE . |
ln -sf "../"$builddir"/"$EXECUTABLE . |
781 |
fi |
fi |
782 |
if test ! -x $EXECUTABLE ; then |
if test ! -x $EXECUTABLE ; then |
783 |
rm -f $RUNLOG ; touch $RUNLOG |
rm -f $RUNLOG ; touch $RUNLOG |
784 |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
785 |
echo " no executable:" $EXECUTABLE >> $RUNLOG |
echo " no executable:" $EXECUTABLE >> $RUNLOG |
786 |
RETVAL=8 |
RETVAL=8 |
787 |
ENDVAL=-1 |
ENDVAL=-1 |
788 |
else |
else |
789 |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
790 |
# output do not exist or is older than executable: |
# output do not exist or is older than executable: |
791 |
rm -f $OUTPUTFILE $RUNLOG ; touch $RUNLOG |
rm -f $OUTPUTFILE $RUNLOG ; touch $RUNLOG |
792 |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
793 |
( eval $COMMAND ) >> $RUNLOG 2>&1 |
( eval $COMMAND ) >> $RUNLOG 2>&1 |
803 |
ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'` |
ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'` |
804 |
touch $RUNLOG |
touch $RUNLOG |
805 |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
806 |
echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1 |
echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1 |
807 |
fi |
fi |
808 |
fi |
fi |
809 |
rm -f run.log_tmp |
rm -f run.log_tmp |
810 |
#- in all cases where OutputFile exists, report SIZE (and AD time) |
#- in all cases where OutputFile exists, report SIZE and time |
811 |
if test -f $OUTPUTFILE ; then |
if test -f $OUTPUTFILE ; then |
812 |
grep '(PID\.TID 0000\.0001) n.. =' $OUTPUTFILE \ |
grep '(PID\.TID 0000\.0001) n.. =' $OUTPUTFILE \ |
813 |
| sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
| sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
814 |
if test "x$ADM" = xt ; then |
grep -A3 'Seconds in section "ALL' $OUTPUTFILE \ |
815 |
grep -A3 'Seconds in section "ALL' $OUTPUTFILE >> $CDIR"/summary.txt" |
| sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt" |
|
fi |
|
816 |
fi |
fi |
817 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
818 |
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
922 |
{ |
{ |
923 |
if [ $# -eq 1 ]; then |
if [ $# -eq 1 ]; then |
924 |
for arg in * ; do |
for arg in * ; do |
925 |
test -f $arg/$1 && echo $arg |
#test -f $arg/$1 && echo $arg |
926 |
|
test -f $arg/$1 -o -f $arg/$1.gz && echo $arg |
927 |
done |
done |
928 |
else |
else |
929 |
echo $* |
echo $* |
1018 |
USE_R4= |
USE_R4= |
1019 |
EXTRFLG= |
EXTRFLG= |
1020 |
|
|
1021 |
ADM= |
#- type of testing (KIND): |
1022 |
OADM= |
# KIND=0 : forward (= default) ; KIND=1 : Tangent Linear with TAF ; |
1023 |
|
# KIND=2 : Adjoint with TAF ; KIND=4 : Adjoint with OpenAD |
1024 |
|
KIND=0 |
1025 |
|
|
1026 |
# list of pTracers to check for monitor output |
# list of pTracers to check for monitor output |
1027 |
PTRACERS_NUM="1 2 3 4 5" |
PTRACERS_NUM="1 2 3 4 5" |
1111 |
|
|
1112 |
-mth) MULTI_THREAD=t ;; |
-mth) MULTI_THREAD=t ;; |
1113 |
|
|
1114 |
-adm | -ad) ADM=t ;; |
-tlm) if test $KIND = 0 ; then KIND=1 ; else |
1115 |
-oad) OADM=t; NODEPEND=t ;; |
echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage |
1116 |
|
fi ;; |
1117 |
|
-adm | -ad) if test $KIND = 0 ; then KIND=2 ; else |
1118 |
|
echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage |
1119 |
|
fi ;; |
1120 |
|
-oad) if test $KIND = 0 ; then KIND=4 ; NODEPEND=t ; else |
1121 |
|
echo "Error: '-tlm', '-adm' and '-oad' are exclusive" ; usage |
1122 |
|
fi ;; |
1123 |
|
|
1124 |
-ieee) echo "Warning: ignore option '-ieee' (already the default)" |
-ieee) echo "Warning: ignore option '-ieee' (already the default)" |
1125 |
printf " ... " ;; |
printf " ... " ;; |
1126 |
-noieee) echo "Warning: will use option '-fast' instead of '-noieee' (obsolete)" |
-noieee) echo "Warning: will use option '-fast' instead of '-noieee' (obsolete)" |
1127 |
printf " ... " ; OptLev=`expr $OptLev \* 2` ;; |
printf " ... " ; OptLev=`expr $OptLev \* 2` ;; |
1128 |
-fast) OptLev=`expr $OptLev \* 2` ;; |
-fast) OptLev=`expr $OptLev \* 2` ;; |
1129 |
-devel) OptLev=0 ;; |
-devel) OptLev=0 ;; |
1130 |
-gsl) GSL=t ;; |
-gsl) GSL=t ;; |
1161 |
if test -r $MPI_MFILE ; then |
if test -r $MPI_MFILE ; then |
1162 |
nl=`wc -l $MPI_MFILE | awk '{print $1}'` |
nl=`wc -l $MPI_MFILE | awk '{print $1}'` |
1163 |
if [ $nl -lt $MPI ] ; then |
if [ $nl -lt $MPI ] ; then |
1164 |
echo "Error: need at least $MPI nodes (currently only $nl) in MPI_MFILE=$MPI_FILE" |
echo "Error: need at least $MPI nodes (currently only $nl) in MPI_MFILE=$MPI_FILE" |
1165 |
usage |
usage |
1166 |
fi |
fi |
1167 |
if [ $verbose -gt 1 ]; then |
if [ $verbose -gt 1 ]; then |
1168 |
echo " MPI_MFILE=$MPI_MFILE : $nl procs for MPI=$MPI run" |
echo " MPI_MFILE=$MPI_MFILE : $nl procs for MPI=$MPI run" |
1169 |
fi |
fi |
1170 |
else |
else |
1171 |
echo "Error: cannot access MPI_MFILE=$MPI_FILE" |
echo "Error: cannot access MPI_MFILE=$MPI_FILE" |
1172 |
usage |
usage |
1173 |
fi |
fi |
1174 |
fi |
fi |
1175 |
|
|
1176 |
#- setting for forward or ADM testing |
#- setting for forward or ADM testing |
1177 |
if test "x$ADM" = xt ; then |
if test $KIND = 1 ; then |
1178 |
|
TARG=ftlall |
1179 |
|
code_dir=code_ad |
1180 |
|
inputdir=input_ad |
1181 |
|
ref_outp="output_tlm.txt" |
1182 |
|
EXECUTABLE="mitgcmuv_ftl" |
1183 |
|
elif test $KIND = 2 ; then |
1184 |
if test "x$TARG" = xobj ; then TARG=adobj ; else TARG=adall ; fi |
if test "x$TARG" = xobj ; then TARG=adobj ; else TARG=adall ; fi |
1185 |
code_dir=code_ad |
code_dir=code_ad |
1186 |
inputdir=input_ad |
inputdir=input_ad |
1187 |
ref_outp="output_adm.txt" |
ref_outp="output_adm.txt" |
1188 |
EXECUTABLE="mitgcmuv_ad" |
EXECUTABLE="mitgcmuv_ad" |
1189 |
elif test "x$OADM" = xt ; then |
elif test $KIND = 4 ; then |
1190 |
TARG=adAll |
TARG=adAll |
1191 |
code_dir=code_oad |
code_dir=code_oad |
1192 |
inputdir=input_oad |
inputdir=input_oad |
1237 |
echo ""; echo -n " -- skip \"$xx\" (not a directory !)" |
echo ""; echo -n " -- skip \"$xx\" (not a directory !)" |
1238 |
fi |
fi |
1239 |
else |
else |
1240 |
if test $count = 1 ; then echo -n ", \"$xx\"" |
if test $count = 1 ; then echo -n ", \"$xx\"" |
1241 |
else count=1 ; echo "" ; echo -n " skip: \"$xx\"" |
else count=1 ; echo "" ; echo -n " skip: \"$xx\"" |
1242 |
fi |
fi |
1243 |
fi |
fi |
1265 |
# (use default or load experiment-specific list from file "tr_checklist") |
# (use default or load experiment-specific list from file "tr_checklist") |
1266 |
# content : 1rst = main variable used to decide if it pass or FAIL |
# content : 1rst = main variable used to decide if it pass or FAIL |
1267 |
# others = number of matching digits to be printed in summary.txt |
# others = number of matching digits to be printed in summary.txt |
1268 |
if test "x$ADM" = x -a "x$OADM" = x; then |
if test $KIND = 1 ; then |
1269 |
|
DEF_CHECK_LIST='tlmGrd tlmCst tlmGrd fwdGrd' |
1270 |
|
EMPTY_RESULTS='.. .. ..' |
1271 |
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
1272 |
|
elif test $KIND = 2 -o $KIND = 4 ; then |
1273 |
|
DEF_CHECK_LIST='AdGrd Cost AdGrd FDGrd' |
1274 |
|
EMPTY_RESULTS='.. .. ..' |
1275 |
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
1276 |
|
else |
1277 |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
1278 |
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
1279 |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
1280 |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
1281 |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
|
else |
|
|
DEF_CHECK_LIST='AdGrd Cost AdGrd FDGrd' |
|
|
EMPTY_RESULTS='.. .. ..' |
|
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
|
1282 |
fi |
fi |
1283 |
|
|
1284 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
1285 |
if test -x tr_cmpnum ; then |
if test "x$CLEANUP" = xt -o -x tr_cmpnum ; then |
1286 |
echo "skipping comparison code build" |
echo "skipping comparison code build" |
1287 |
else |
else |
1288 |
createcodelet |
createcodelet |
1298 |
# Create a uniquely named directory to store results |
# Create a uniquely named directory to store results |
1299 |
CMDLINE=$0 |
CMDLINE=$0 |
1300 |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
for xx in "$@" ; do nw=`echo $xx | wc -w` |
1301 |
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" ; else |
1302 |
else CMDLINE="$CMDLINE '$xx'" ; fi |
nb=`echo $xx | grep -c '='` |
1303 |
|
if test $nb = 0 ; then CMDLINE="$CMDLINE '$xx'" |
1304 |
|
else yy=`echo "$xx'" | sed "s/=/='/"` ; |
1305 |
|
CMDLINE="$CMDLINE $yy" ; fi |
1306 |
|
fi |
1307 |
done |
done |
1308 |
#for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done |
#for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done |
1309 |
MACH=`hostname` |
MACH=`hostname` |
1350 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1351 |
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
1352 |
else |
else |
1353 |
echo | tee $SUMMARY |
echo | tee -a $SUMMARY |
1354 |
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY |
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee -a $SUMMARY |
1355 |
exit 1 |
exit 1 |
1356 |
fi |
fi |
1357 |
else |
else |
1361 |
fi |
fi |
1362 |
echo |
echo |
1363 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1364 |
if test "x$ADM" = x -a "x$OADM" = x; then |
if test $KIND = 0 ; then |
1365 |
if [ $MATCH_CRIT -lt 10 ] ; |
line_0=`printf '%s %2i' 'default' $MATCH_CRIT` |
|
then line_0="default "$MATCH_CRIT ; |
|
|
else line_0="default "$MATCH_CRIT ; fi |
|
1366 |
line_0="$line_0 ----T----- ----S----- ----U----- ----V-----" |
line_0="$line_0 ----T----- ----S----- ----U----- ----V-----" |
1367 |
line_1="G D M c m s m s m s m s" |
line_1="G D M c m s m s m s m s" |
1368 |
line_2="e p a R g m m e . m m e . m m e . m m e ." |
line_2="e p a R g m m e . m m e . m m e . m m e ." |
1375 |
line_3="$line_3 i a a d" |
line_3="$line_3 i a a d" |
1376 |
line_4="$line_4 n x n ." |
line_4="$line_4 n x n ." |
1377 |
done |
done |
1378 |
|
else |
1379 |
|
line_0=`printf '%s %2i' 'default ' $MATCH_CRIT` |
1380 |
|
if test $KIND = 1 ; then |
1381 |
|
#echo "TANGLIN=true" >> $SUMMARY |
1382 |
|
echo "TangLin generated by TAF" >> $SUMMARY |
1383 |
|
elif test $KIND = 3 ; then |
1384 |
|
echo "TangLin generated by OpenAD" >> $SUMMARY |
1385 |
|
elif test $KIND = 2 ; then |
1386 |
|
#echo "ADJOINT=true" >> $SUMMARY |
1387 |
|
echo "Adjoint generated by TAF" >> $SUMMARY |
1388 |
|
else |
1389 |
|
echo "Adjoint generated by OpenAD" >> $SUMMARY |
1390 |
|
fi |
1391 |
|
if test $KIND = 1 -o $KIND = 3 ; then |
1392 |
|
line_1="G D M C T F" |
1393 |
|
line_2="e p a R o L D" |
1394 |
|
else |
1395 |
|
line_1="G D M C A F" |
1396 |
|
line_2="e p a R o d D" |
1397 |
|
fi |
1398 |
|
line_3="n n k u s G G" |
1399 |
|
line_4="2 d e n t r r" |
1400 |
|
echo >> $SUMMARY |
1401 |
|
fi |
1402 |
|
if test "x$CLEANUP" != xt ; then |
1403 |
echo "$line_0" | tee -a $SUMMARY |
echo "$line_0" | tee -a $SUMMARY |
1404 |
echo "$line_1" | tee -a $SUMMARY |
echo "$line_1" | tee -a $SUMMARY |
1405 |
echo "$line_2" | tee -a $SUMMARY |
echo "$line_2" | tee -a $SUMMARY |
1406 |
echo "$line_3" | tee -a $SUMMARY |
echo "$line_3" | tee -a $SUMMARY |
1407 |
echo "$line_4" | tee -a $SUMMARY |
echo "$line_4" | tee -a $SUMMARY |
1408 |
echo " " | tee -a $SUMMARY |
echo "" | tee -a $SUMMARY |
|
else |
|
|
echo "ADJOINT=true" >> $SUMMARY |
|
|
echo >> $SUMMARY |
|
|
if [ $MATCH_CRIT -lt 10 ] ; |
|
|
then line_0="default "$MATCH_CRIT ; |
|
|
else line_0="default "$MATCH_CRIT ; fi |
|
|
echo "$line_0" | tee -a $SUMMARY |
|
|
cat << EOF | tee -a $SUMMARY |
|
|
G D M C A F |
|
|
e p a R o d D |
|
|
n n k u s G G |
|
|
2 d e n t r r |
|
|
|
|
|
EOF |
|
1409 |
fi |
fi |
1410 |
echo "-------------------------------------------------------------------------------" |
echo "-------------------------------------------------------------------------------" |
1411 |
|
|
1433 |
rm -f SIZE.h.mpi genmake.tr_log make.tr_log |
rm -f SIZE.h.mpi genmake.tr_log make.tr_log |
1434 |
) |
) |
1435 |
if test -d $dir/$rundir/CVS ; then |
if test -d $dir/$rundir/CVS ; then |
1436 |
echo -n ' --- dir:' $dir/$rundir ': ' |
echo -n ' --- dir:' $dir/$rundir ': ' |
1437 |
run_clean $dir/$rundir |
run_clean $dir/$rundir |
1438 |
fi |
fi |
1439 |
trdir=`( cd $dir ; find . -type d -name "$pfxdir.*" -print | sed 's/^.\///')` |
trdir=`( cd $dir ; find . -type d -name "$pfxdir.*" -print | sed 's/^.\///')` |
1448 |
# Verify that the testdir exists and contains previous |
# Verify that the testdir exists and contains previous |
1449 |
# results in the correct location--or skip this directory! |
# results in the correct location--or skip this directory! |
1450 |
fout=$dir"/results/"$ref_outp |
fout=$dir"/results/"$ref_outp |
1451 |
if test ! -r $fout ; then |
#if test ! -r $fout ; then |
1452 |
|
if test ! -r $fout -a ! -r ${fout}.gz ; then |
1453 |
echo "can't read \"$fout\" -- skipping $dir" |
echo "can't read \"$fout\" -- skipping $dir" |
1454 |
continue |
continue |
1455 |
fi |
fi |
1468 |
if test "x$MPI" != "x0" ; then |
if test "x$MPI" != "x0" ; then |
1469 |
ntx=1 ; nty=1 |
ntx=1 ; nty=1 |
1470 |
if test "x$MULTI_THREAD" = "xt" ; then |
if test "x$MULTI_THREAD" = "xt" ; then |
1471 |
ff=$dir"/input/eedata.mth" |
ff=$dir"/input/eedata.mth" |
1472 |
ntx=`grep "^ *nTx *=" $ff | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"` |
ntx=`grep "^ *nTx *=" $ff | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"` |
1473 |
nty=`grep "^ *nTy *=" $ff | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"` |
nty=`grep "^ *nTy *=" $ff | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"` |
1474 |
|
if test "x$ntx" = x ; then ntx=1 ; fi |
1475 |
|
if test "x$nty" = x ; then nty=1 ; fi |
1476 |
fi |
fi |
1477 |
#- create new SIZE.h with no more than '$MPI' Procs |
#- create new SIZE.h with no more than '$MPI' Procs |
1478 |
mk_mpi_size $CODE_DIR"/SIZE.h_mpi" $BUILD_DIR"/tr_size.mpi" $MPI $ntx $nty |
mk_mpi_size $CODE_DIR"/SIZE.h_mpi" $BUILD_DIR"/tr_size.mpi" $MPI $ntx $nty |
1522 |
name=`echo $exd | sed -e "s/$inputdir\.//"` |
name=`echo $exd | sed -e "s/$inputdir\.//"` |
1523 |
refExOut=`echo $ref_outp | sed "s/\./.${name}./"` |
refExOut=`echo $ref_outp | sed "s/\./.${name}./"` |
1524 |
outf="$dir/results/$refExOut" |
outf="$dir/results/$refExOut" |
1525 |
if test -f $outf -a -r $outf ; then |
#if test -f $outf -a -r $outf ; then |
1526 |
|
if test -r $outf -o -r ${outf}.gz ; then |
1527 |
if test "x$MULTI_THREAD" = "xt" ; then |
if test "x$MULTI_THREAD" = "xt" ; then |
1528 |
if test -r $dir"/"$exd"/eedata.mth" ; then |
if test -r $dir"/"$exd"/eedata.mth" ; then |
1529 |
if test "x$MPI" = "x0" ; then |
if test "x$MPI" = "x0" ; then |
1546 |
|
|
1547 |
echo |
echo |
1548 |
if test "x$extra_runs" = "x" ; then |
if test "x$extra_runs" = "x" ; then |
1549 |
echo "Experiment: $dir" |
echo "Experiment: $dir" |
1550 |
else |
else |
1551 |
echo "Experiment: $dir ; extra_runs=$extra_runs" |
echo "Experiment: $dir ; extra_runs=$extra_runs" |
1552 |
fi |
fi |
1553 |
echo |
echo |
1554 |
unset genmake makedepend make run |
unset genmake makedepend make run |
1567 |
run=N |
run=N |
1568 |
genmakemodel $dir/$builddir && genmake=Y \ |
genmakemodel $dir/$builddir && genmake=Y \ |
1569 |
&& makeclean $dir/$builddir \ |
&& makeclean $dir/$builddir \ |
1570 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
&& symlink_mpifiles $dir $code_dir $builddir \ |
1571 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
1572 |
&& makemodel $dir/$builddir && make=Y |
&& makemodel $dir/$builddir && make=Y |
1573 |
else |
else |
1574 |
genmakemodel $dir/$builddir && genmake=Y \ |
genmakemodel $dir/$builddir && genmake=Y \ |
1575 |
&& makeclean $dir/$builddir \ |
&& makeclean $dir/$builddir \ |
1576 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
&& symlink_mpifiles $dir $code_dir $builddir \ |
1577 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
1578 |
&& makemodel $dir/$builddir && make=Y \ |
&& makemodel $dir/$builddir && make=Y \ |
1579 |
&& run_clean $dir/$rundir \ |
&& run_clean $dir/$rundir \ |
1585 |
|
|
1586 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1587 |
echo 1>&2 |
echo 1>&2 |
1588 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1589 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt" |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt" |
1590 |
|
|
1591 |
for ex in $extra_runs ; do |
for ex in $extra_runs ; do |
1592 |
unset run |
unset run |
1593 |
results=$EMPTY_RESULTS |
results=$EMPTY_RESULTS |
1594 |
# reference output file |
# reference output file |
1595 |
refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"` |
refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"` |
1596 |
# Create an output dir & summary.txt file for each extra run (tdir.ex) |
# Create an output dir & summary.txt file for each extra run (tdir.ex) |
1616 |
fi |
fi |
1617 |
done |
done |
1618 |
|
|
1619 |
if test -f $DRESULTS"/"genmake_state ; then : ; else |
if test ! -f $DRESULTS"/"genmake_state ; then |
1620 |
if test -f $dir/$builddir/Makefile ; then |
if test -f $dir/$builddir/Makefile ; then |
1621 |
mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'` |
mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'` |
1622 |
echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state |
echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state |
1625 |
if test "x$OPTFILE" = xNONE ; then |
if test "x$OPTFILE" = xNONE ; then |
1626 |
eval $mkOpt |
eval $mkOpt |
1627 |
sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\ |
sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\ |
1628 |
$SUMMARY > tr_0.tmp_log |
$SUMMARY > tmp.tr_log |
1629 |
RETVAL=$? |
RETVAL=$? |
1630 |
if test "x$RETVAL" = x0 ; then rm -f $SUMMARY |
if test "x$RETVAL" = x0 ; then rm -f $SUMMARY |
1631 |
cp tr_0.tmp_log $SUMMARY |
cp tmp.tr_log $SUMMARY |
1632 |
else rm -f tr_0.tmp_log |
else rm -f tmp.tr_log |
1633 |
fi |
fi |
1634 |
fi |
fi |
1635 |
gmkLog=$dir/$builddir/genmake.log |
gmkLog=$dir/$builddir/genmake.log |
1636 |
grep '^Get compiler version using:' $gmkLog > /dev/null 2>&1 |
if test -r $gmkLog ; then |
1637 |
RETVAL=$? |
grep '^Get compiler version using:' $gmkLog > /dev/null 2>&1 |
1638 |
if test "x$RETVAL" = x0 ; then |
RETVAL=$? |
1639 |
echo "from '$gmkLog', extract compiler version:" >> $DRESULTS/genmake_state |
if test "x$RETVAL" = x0 ; then |
1640 |
sed -n '/Get compiler version/,/<-- compiler version/p' $gmkLog \ |
echo -n "from '$gmkLog', " >> $DRESULTS/genmake_state |
1641 |
| grep -v '^... compiler version ' > tr_1.tmp_log |
echo "extract compiler version:" >> $DRESULTS/genmake_state |
1642 |
sed -n '1p' tr_1.tmp_log >> $DRESULTS/genmake_state |
sed -n '/Get compiler version/,/<-- compiler version/p' \ |
1643 |
sed -n '2,/^$/p' tr_1.tmp_log | sed '/^$/d' | sed 's/^./ &/' \ |
$gmkLog | grep -v '^... compiler version ' > tmp.tr_log |
1644 |
>> $DRESULTS/genmake_state |
sed -n '1p' tmp.tr_log >> $DRESULTS/genmake_state |
1645 |
rm -f tr_1.tmp_log |
sed -n '2,/^$/p' tmp.tr_log | sed '/^$/d' | sed 's/^./ &/' \ |
1646 |
|
>> $DRESULTS/genmake_state |
1647 |
|
rm -f tmp.tr_log |
1648 |
|
fi |
1649 |
|
echo -n "from '$gmkLog', " >> $DRESULTS/genmake_state |
1650 |
|
echo "get NETCDF & LAPACK settings:" >> $DRESULTS/genmake_state |
1651 |
|
sed -n '/set HAVE_NETCDF=/p' $gmkLog >> $DRESULTS/genmake_state |
1652 |
|
sed -n '/set HAVE_LAPACK=/p' $gmkLog >> $DRESULTS/genmake_state |
1653 |
fi |
fi |
1654 |
fi |
fi |
1655 |
fi |
fi |
1656 |
#postclean $dir/$builddir |
#postclean $dir/$builddir |
1657 |
if test "x$POSTCLEAN" = x2 ; then |
if test "x$POSTCLEAN" = x2 ; then |
1658 |
makeclean $dir/$builddir \ |
makeclean $dir/$builddir \ |
1659 |
&& run_clean $dir/$rundir |
&& run_clean $dir/$rundir |
1660 |
fi |
fi |
1661 |
if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then rm -f $LOC_MFILE ; fi |
if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then rm -f $LOC_MFILE ; fi |
1662 |
|
|
1703 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
1704 |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //' |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //' |
1705 |
if test -e tr_out.txt ; then |
if test -e tr_out.txt ; then |
1706 |
mv tr_out.txt tr_out.txt.old |
mv tr_out.txt tr_out.txt.old |
1707 |
fi |
fi |
1708 |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt |
1709 |
fi |
fi |
1711 |
if test "x$DELDIR" = xt ; then |
if test "x$DELDIR" = xt ; then |
1712 |
rm -rf $DRESULTS |
rm -rf $DRESULTS |
1713 |
fi |
fi |
1714 |
|
echo "======== End of testreport execution ========" |