35 |
echo " (DEF=\"hostname\")" |
echo " (DEF=\"hostname\")" |
36 |
echo " (-ptr|-ptracers) STRING specify which ptracers to test" |
echo " (-ptr|-ptracers) STRING specify which ptracers to test" |
37 |
echo " (DEF=\"1 2 3 4 5\")" |
echo " (DEF=\"1 2 3 4 5\")" |
38 |
|
echo " (-match) NUMBER Matching Criteria (number of digits)" |
39 |
|
echo " (DEF=\"12\")" |
40 |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
41 |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
42 |
echo " (-q|-quick) same as \"-nogenmake -noclean -nodepend\"" |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
43 |
echo " (-ng|-nogenmake) skip the genmake stage" |
echo " (-nogenmake|-ng) skip the genmake stage" |
44 |
echo " (-nc|-noclean) skip the \"make clean\" stage" |
echo " (-noclean|-nc) skip the \"make clean\" stage" |
45 |
echo " (-nd|-nodepend) skip the \"make depend\" stage" |
echo " (-nodepend|-nd) skip the \"make depend\" stage" |
46 |
echo " (-dd|-deldir) on success, delete the output directory" |
echo " (-deldir|-dd) on success, delete the output directory" |
47 |
|
echo " (-ts) provide timing information per timestep" |
48 |
|
echo " (-papis) provide MFlop/s per timestep using PAPI" |
49 |
|
echo " (-pcls) provide MFlop/s per timestep using PCL" |
50 |
echo |
echo |
51 |
echo "and where STRING can be a whitespace-delimited list" |
echo "and where STRING can be a whitespace-delimited list" |
52 |
echo "such as:" |
echo "such as:" |
94 |
echo "OK" |
echo "OK" |
95 |
} |
} |
96 |
|
|
97 |
testoutput_for_prop() |
testoutput_var() |
98 |
{ |
{ |
99 |
# testoutput_for_prop dir s1 label subdir extension |
# testoutput_var dir s1 label subdir reference_output |
100 |
# |
# |
101 |
# compares files $dir/$subdir/$OUTPUTFILE and $dir/results/output.txt |
# compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE |
102 |
# using search strings s1 and text label |
# with same output from reference file $dir/results/$reference_output |
103 |
|
# using search strings s1 and text label |
104 |
|
|
105 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
106 |
echo testoutput_for_prop: grep "$2" $1/$4/$OUTPUTFILE 1>&2 |
echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2 |
107 |
fi |
fi |
108 |
if [ -r $1/$4/$OUTPUTFILE ]; then |
if [ -r $1/$4/$OUTPUTFILE ]; then |
109 |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
110 |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
111 |
if [ $lncntA -lt 3 ]; then |
if [ $lncntA -lt 2 ]; then |
112 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
113 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
114 |
fi |
fi |
115 |
return 99 |
return 99 |
116 |
fi |
fi |
117 |
else |
else |
118 |
echo testoutput_for_prop: $OUTPUTFILE from model run was not readable 1>&2 |
echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2 |
119 |
return 99 |
return 99 |
120 |
fi |
fi |
121 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
122 |
echo testoutput_for_prop: grep "$2" $1/results/output.$5 1>&2 |
echo testoutput_var: grep "$2" $1/results/$5 1>&2 |
123 |
fi |
fi |
124 |
grep "$2" $1/results/output.$5 | sed 's/.*=//' | cat -n > tmp2.txt |
grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
125 |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
126 |
if [ $lncntB -lt 3 ]; then |
if [ $lncntB -lt 2 ]; then |
127 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
128 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
129 |
fi |
fi |
137 |
fi |
fi |
138 |
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
139 |
if [ $has_nan -gt 0 ] ; then |
if [ $has_nan -gt 0 ] ; then |
140 |
echo testoutput_for_prop: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
141 |
return 99 |
return 99 |
142 |
fi |
fi |
143 |
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
144 |
if [ $has_inf -gt 0 ] ; then |
if [ $has_inf -gt 0 ] ; then |
145 |
echo testoutput_for_prop: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
146 |
return 99 |
return 99 |
147 |
fi |
fi |
148 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
149 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
echo testoutput_var: join tmp1.txt tmp2.txt 1>&2 |
150 |
fi |
fi |
151 |
join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
152 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
153 |
echo testoutput_for_prop: compare_lines 1>&2 |
echo testoutput_var: compare_lines 1>&2 |
154 |
fi |
fi |
155 |
if [ $verbose -gt 1 ]; then |
if [ $verbose -gt 1 ]; then |
156 |
cat tmp3.txt 1>&2 |
cat tmp3.txt 1>&2 |
158 |
echo "-1" >> tmp3.txt |
echo "-1" >> tmp3.txt |
159 |
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
160 |
cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
161 |
digits_of_similarity=`./tmp_cmpnum < tmp4.txt` |
digits_of_similarity=`./tr_cmpnum < tmp4.txt` |
162 |
if [ $digits_of_similarity -eq 99 ]; then |
if [ $digits_of_similarity -eq 99 ]; then |
163 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
164 |
echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
echo testoutput_var: No comparison was available for \"$3\" 1>&2 |
165 |
fi |
fi |
166 |
digits_of_similarity=99 |
digits_of_similarity=99 |
167 |
else |
else |
168 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
169 |
echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2 |
170 |
fi |
fi |
171 |
fi |
fi |
172 |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
199 |
join t06.txt t16.txt > t6.txt |
join t06.txt t16.txt > t6.txt |
200 |
echo "-1" >> t5.txt |
echo "-1" >> t5.txt |
201 |
echo "-1" >> t6.txt |
echo "-1" >> t6.txt |
202 |
digits_5=`./tmp_cmpnum < t5.txt` |
digits_5=`./tr_cmpnum < t5.txt` |
203 |
digits_6=`./tmp_cmpnum < t6.txt` |
digits_6=`./tr_cmpnum < t6.txt` |
204 |
dashnum $digits_5 $digits_6 |
dashnum $digits_5 $digits_6 |
205 |
rm -f t[01][56].txt t[56].txt |
rm -f t[01][56].txt t[56].txt |
206 |
} |
} |
230 |
done |
done |
231 |
} |
} |
232 |
|
|
233 |
testoutput() |
testoutput_run() |
234 |
{ |
{ |
235 |
# testoutput directory subdir extension |
# testoutput_run directory subdir reference_output |
236 |
# |
# |
237 |
# test output in "directory" |
# test output from 1 run in "directory" |
238 |
if test "x$ADM" = x ; then |
# if test "x$ADM" = x ; then |
239 |
if [ $debug -gt 0 ]; then |
# default list of output variables to be checked: |
240 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
# 1rst : main variable used to decide if it pass or FAIL |
241 |
fi |
# others : number of matching digits to be printed in summary.txt |
242 |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$? |
listChk=$DEF_CHECK_LIST |
243 |
if [ $debug -gt 0 ]; then |
# load experiment-specific list from file "tr_checklist" (if it exist) |
244 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi |
245 |
fi |
sVar=`echo $listChk | awk '{print $1}'` |
246 |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$? |
# remove 1rst var and expand the list: + => min max mean s.d |
247 |
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$? |
listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \ |
248 |
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$? |
| sed 's/+//g' | sed "s/^$sVar//"` |
249 |
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$? |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi |
250 |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$? |
for ii in 1 2 3 4 5 6 7 8 9 ; do |
251 |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$? |
tst=`eval 'echo "$HAVE_PTR0'$ii'"'` |
252 |
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$? |
#echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 |
253 |
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$? |
if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi |
254 |
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$? |
done |
255 |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$? |
tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'` |
256 |
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$? |
if test $tst != 1 ; then |
257 |
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$? |
if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2 |
258 |
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$? |
else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi |
259 |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$? |
echo "==> WARNING: in checked list:" $listVar 1>&2 |
260 |
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$? |
#- put it back once: |
261 |
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$? |
listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"` |
262 |
|
fi |
263 |
# This is for PTRACERS |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi |
264 |
for ii in $PTRACERS_NUM ; do |
echo "listVar='$listVar'" > $CDIR"/summary.txt" |
265 |
eval `echo "p0"$ii"_min=99"` |
allargs="" |
266 |
eval `echo "p0"$ii"_max=99"` |
for xx in $listVar |
267 |
eval `echo "p0"$ii"_mean=99"` |
do |
268 |
eval `echo "p0"$ii"_sd=99"` |
case $xx in |
269 |
tst=`eval 'echo "$HAVE_PTR0'$ii'"'` |
'PS') if [ $debug -gt 0 ] |
270 |
#echo 'tst = '$tst |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
271 |
if test "x$tst" = xt ; then |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$? |
272 |
a="trcstat_ptracer0" |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
273 |
testoutput_for_prop $1 "$a"$ii"_min" "p0"$ii"_min" $2 $3 |
'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;; |
274 |
RETVAL=$? ; eval `echo "p0"$ii"_min="$RETVAL` |
'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;; |
275 |
testoutput_for_prop $1 "$a"$ii"_max" "p0"$ii"_max" $2 $3 |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;; |
276 |
RETVAL=$? ; eval `echo "p0"$ii"_max="$RETVAL` |
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;; |
277 |
testoutput_for_prop $1 "$a"$ii"_mean" "p0"$ii"_mean" $2 $3 |
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;; |
278 |
RETVAL=$? ; eval `echo "p0"$ii"_mean="$RETVAL` |
'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;; |
279 |
testoutput_for_prop $1 "$a"$ii"_sd" "p0"$ii"_sd" $2 $3 |
'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;; |
280 |
RETVAL=$? ; eval `echo "p0"$ii"_sd="$RETVAL` |
'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;; |
281 |
fi |
'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;; |
282 |
done |
'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;; |
283 |
|
'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;; |
284 |
allargs="$cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd" |
'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;; |
285 |
allargs="$allargs $umin $umax $umean $usd $vmin $vmax $vmean $vsd" |
'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;; |
286 |
allargs="$allargs $p01_min $p01_max $p01_mean $p01_sd" |
'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;; |
287 |
allargs="$allargs $p02_min $p02_max $p02_mean $p02_sd" |
'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;; |
288 |
allargs="$allargs $p03_min $p03_max $p03_mean $p03_sd" |
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;; |
289 |
allargs="$allargs $p04_min $p04_max $p04_mean $p04_sd" |
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;; |
290 |
allargs="$allargs $p05_min $p05_max $p05_mean $p05_sd" |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;; |
291 |
|
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
292 |
eval "dashnum $allargs" |
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;; |
293 |
|
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
294 |
else |
testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;; |
295 |
testoutput_ad $1 $2 "precision_grdchk_result" |
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
296 |
fi |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
297 |
|
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
298 |
|
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; |
299 |
|
'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; |
300 |
|
'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; |
301 |
|
'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; |
302 |
|
'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; |
303 |
|
'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;; |
304 |
|
'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;; |
305 |
|
'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;; |
306 |
|
'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;; |
307 |
|
'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;; |
308 |
|
'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;; |
309 |
|
'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;; |
310 |
|
'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;; |
311 |
|
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;; |
312 |
|
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;; |
313 |
|
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;; |
314 |
|
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;; |
315 |
|
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;; |
316 |
|
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;; |
317 |
|
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
318 |
|
esac |
319 |
|
if test $xx = $sVar |
320 |
|
then allargs="$allargs > $yy <" |
321 |
|
else allargs="$allargs $yy" |
322 |
|
fi |
323 |
|
done |
324 |
|
|
325 |
|
nbVar=`echo $listVar | awk '{print NF}'` |
326 |
|
if [ $nbVar -lt $LEN_CHECK_LIST ] ; then |
327 |
|
#-- fill line (up to standard length) with dot: |
328 |
|
adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'` |
329 |
|
echo $allargs $adNul |
330 |
|
else |
331 |
|
echo $allargs |
332 |
|
fi |
333 |
|
|
334 |
|
# else |
335 |
|
# testoutput_ad $1 $2 "precision_grdchk_result" |
336 |
|
# fi |
337 |
} |
} |
338 |
|
|
339 |
genmakemodel() |
genmakemodel() |
364 |
if test "x$MPI" = xt ; then |
if test "x$MPI" = xt ; then |
365 |
command="$command -mpi" |
command="$command -mpi" |
366 |
fi |
fi |
367 |
|
if test "x$TS" = xt ; then |
368 |
|
command="$command -ts" |
369 |
|
fi |
370 |
|
if test "x$PAPIS" = xt ; then |
371 |
|
command="$command -papis" |
372 |
|
else |
373 |
|
if test "x$PCLS" = xt ; then |
374 |
|
command="$command -pcls" |
375 |
|
fi |
376 |
|
fi |
377 |
printf 'genmake ... ' 1>&2 |
printf 'genmake ... ' 1>&2 |
378 |
$command > make.log 2>&1 |
$command > make.log 2>&1 |
379 |
RETVAL=$? |
RETVAL=$? |
605 |
RETVAL=8 |
RETVAL=8 |
606 |
ENDVAL=-1 |
ENDVAL=-1 |
607 |
else |
else |
608 |
if test $OUTPUTFILE -ot $EXECUTABLE ; then |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
609 |
|
# output do not exist or is older than executable: |
610 |
rm -f run.log ; touch run.log |
rm -f run.log ; touch run.log |
611 |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
612 |
( eval $COMMAND ) >> run.log 2>&1 |
( eval $COMMAND ) >> run.log 2>&1 |
649 |
# create codelet for comparing model output |
# create codelet for comparing model output |
650 |
|
|
651 |
printf "creating the comparison code... " |
printf "creating the comparison code... " |
652 |
cat > tmp_cmpnum.c <<EOF |
cat > tr_cmpnum.c <<EOF |
653 |
#include <stdio.h> |
#include <stdio.h> |
654 |
#include <math.h> |
#include <math.h> |
655 |
int main( int argc, char** argv ) { |
int main( int argc, char** argv ) { |
656 |
int linnum,best,lncnt; |
int linnum,cmplin,best,lncnt; |
657 |
double a,b,abave,relerr; |
double a,b,abave,relerr; |
658 |
best = -22; |
best = -22; |
659 |
lncnt = 0; |
lncnt = 0; |
660 |
while( 1 & (lncnt+=1) < 999 ) { |
while( 1 & ( (lncnt+=1) < 999 ) ) { |
661 |
scanf("%d", &linnum); |
scanf("%d", &linnum); |
662 |
if (linnum == -1) break; |
if (linnum == -1) break; |
663 |
scanf("%lf", &a); scanf("%lf", &b); |
scanf("%lf", &a); scanf("%lf", &b); |
664 |
abave = 0.5*(fabs(a)+fabs(b)); |
abave = 0.5*(fabs(a)+fabs(b)); |
665 |
if (abave > 0.0) { |
if ( abave == abave ) { |
666 |
relerr=fabs(a-b)/abave; |
if (abave > 0.0) { |
667 |
if (relerr > 0.0) { linnum = (int)rint(log10(relerr)); } |
relerr=fabs(a-b)/abave; |
668 |
else { linnum = -16 ; } |
if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); } |
669 |
best = (best > linnum) ? best : linnum; |
else { cmplin = -16 ; } |
670 |
} |
best = (best > cmplin) ? best : cmplin; } |
671 |
|
else { cmplin = -22 ; } |
672 |
|
/* printf("%d ; %lf ; %lf\n",cmplin,a,b); */ |
673 |
|
} |
674 |
|
else { |
675 |
|
/* printf("%lf ; %lf ; %lf\n",abave,a,b); */ |
676 |
|
break; } |
677 |
} |
} |
678 |
if (lncnt == 999) best=-29; |
if (lncnt == 999) best=-29; |
679 |
|
if (linnum != -1) best=-99; |
680 |
printf("%d\n", -best); |
printf("%d\n", -best); |
681 |
return 0; |
return 0; |
682 |
} |
} |
683 |
EOF |
EOF |
684 |
$CC -o tmp_cmpnum tmp_cmpnum.c -lm |
$CC -o tr_cmpnum tr_cmpnum.c -lm |
685 |
|
|
686 |
if [ -x ./tmp_cmpnum ]; then |
if [ -x ./tr_cmpnum ]; then |
687 |
echo "OK" |
echo "OK" |
688 |
return 0 |
return 0 |
689 |
else |
else |
701 |
nm=$1 |
nm=$1 |
702 |
printf '%s %s %s %s' $2 $3 $4 $5 |
printf '%s %s %s %s' $2 $3 $4 $5 |
703 |
shift; shift; shift; shift; shift; |
shift; shift; shift; shift; shift; |
704 |
printf '%3s' $@ |
listPrt=$@ |
705 |
|
listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'` |
706 |
|
xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'` |
707 |
|
printf '%3s' $listPrt |
708 |
|
# line below does not work on hp-ux_ia64 : do those substitutions later on |
709 |
|
# printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' |
710 |
|
|
711 |
if [ $1 = '--' ]; then |
if [ $xx = '..' ]; then |
712 |
|
printf ' N/O ' |
713 |
|
elif [ $xx = '--' ]; then |
714 |
|
printf ' N/O ' |
715 |
|
elif [ $xx = 99 ]; then |
716 |
printf ' N/O ' |
printf ' N/O ' |
717 |
else |
else |
718 |
if [ $1 -gt 12 ]; then |
if [ $xx -ge $MATCH_CRIT ]; then |
719 |
printf ' pass' |
printf ' pass' |
720 |
else |
else |
721 |
printf ' FAIL' |
printf ' FAIL' |
730 |
{ |
{ |
731 |
if [ $# -eq 1 ]; then |
if [ $# -eq 1 ]; then |
732 |
for arg in * ; do |
for arg in * ; do |
733 |
test -d $arg/$1 && echo $arg |
test -f $arg/$1 && echo $arg |
734 |
done |
done |
735 |
else |
else |
736 |
echo $* |
echo $* |
787 |
# Additional monitor types |
# Additional monitor types |
788 |
PTRACERS_NUM="1 2 3 4 5" |
PTRACERS_NUM="1 2 3 4 5" |
789 |
|
|
790 |
|
MATCH_CRIT=13 |
791 |
|
|
792 |
printf "parsing options... " |
printf "parsing options... " |
793 |
|
|
794 |
ac_prev= |
ac_prev= |
853 |
-ptracers=* | --ptracers=* | -ptr=* | --ptr=*) |
-ptracers=* | --ptracers=* | -ptr=* | --ptr=*) |
854 |
PTRACERS_NUM=$ac_optarg ;; |
PTRACERS_NUM=$ac_optarg ;; |
855 |
|
|
856 |
|
-match | --match ) ac_prev=MATCH_CRIT ;; |
857 |
|
-match=* | --match=* ) MATCH_CRIT=$ac_optarg ;; |
858 |
|
|
859 |
-j) ac_prev=JOBS ;; |
-j) ac_prev=JOBS ;; |
860 |
-j=*) JOBS=$ac_optarg ;; |
-j=*) JOBS=$ac_optarg ;; |
861 |
|
|
889 |
|
|
890 |
-deldir | -dd) DELDIR=t ;; |
-deldir | -dd) DELDIR=t ;; |
891 |
|
|
892 |
|
-ts) TS=t;; |
893 |
|
|
894 |
|
-papis) PAPIS=t;; |
895 |
|
|
896 |
|
-pcls) PCL=t;; |
897 |
|
|
898 |
-*) |
-*) |
899 |
echo "Error: unrecognized option: "$ac_option |
echo "Error: unrecognized option: "$ac_option |
900 |
usage |
usage |
915 |
NODEPEND=t |
NODEPEND=t |
916 |
fi |
fi |
917 |
|
|
918 |
|
#- setting for forward or ADM testing |
919 |
|
if test "x$ADM" = xt ; then |
920 |
|
code_dir=code_ad |
921 |
|
input_dirs='input_ad input' |
922 |
|
ref_outp="output_adm.txt" |
923 |
|
EXECUTABLE="mitgcmuv_ad" |
924 |
|
else |
925 |
|
code_dir=code |
926 |
|
input_dirs='input' |
927 |
|
ref_outp="output.txt" |
928 |
|
EXECUTABLE="mitgcmuv" |
929 |
|
fi |
930 |
|
|
931 |
if test "x$TESTDIRS" = x ; then |
if test "x$TESTDIRS" = x ; then |
932 |
if test "x$ADM" = xt ; then |
# if test "x$ADM" = xt ; then |
933 |
LIST=`scandirs results_ad` |
# LIST=`scandirs results_ad/$ref_outp` |
934 |
else |
# else |
935 |
LIST=`scandirs results` |
LIST=`scandirs results/$ref_outp` |
936 |
fi |
# fi |
937 |
else |
else |
938 |
#- expand group of experiments: |
#- expand group of experiments: |
939 |
LIST=" " |
LIST=" " |
977 |
OPTFILE=$MITGCM_OF |
OPTFILE=$MITGCM_OF |
978 |
fi |
fi |
979 |
|
|
980 |
if test "x$ADM" = xt ; then |
OUTPUTFILE=$ref_outp |
|
EXECUTABLE="mitgcmuv_ad" |
|
|
OUTPUTFILE="output_adm.txt" |
|
|
else |
|
|
EXECUTABLE="mitgcmuv" |
|
|
OUTPUTFILE="output.txt" |
|
|
fi |
|
|
|
|
981 |
if test "x$COMMAND" = x ; then |
if test "x$COMMAND" = x ; then |
982 |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
983 |
fi |
fi |
988 |
#echo "OK" |
#echo "OK" |
989 |
echo "OK (COMMAND= $COMMAND )" |
echo "OK (COMMAND= $COMMAND )" |
990 |
|
|
991 |
|
# set the Default List of output variables to be checked: |
992 |
|
# (use default or load experiment-specific list from file "tr_checklist") |
993 |
|
# content : 1rst = main variable used to decide if it pass or FAIL |
994 |
|
# others = number of matching digits to be printed in summary.txt |
995 |
|
if test "x$ADM" = x ; then |
996 |
|
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
997 |
|
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
998 |
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
999 |
|
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
1000 |
|
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
1001 |
|
else |
1002 |
|
DEF_CHECK_LIST='Cost Cost Grad' |
1003 |
|
EMPTY_RESULTS='.. ..' |
1004 |
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
1005 |
|
fi |
1006 |
|
|
1007 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
1008 |
createcodelet |
createcodelet |
1009 |
|
|
1067 |
echo |
echo |
1068 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1069 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x ; then |
1070 |
line_0=" ----T----- ----S----- ----U----- ----V-----" |
if [ $MATCH_CRIT -lt 10 ] ; |
1071 |
|
then line_0="default "$MATCH_CRIT ; |
1072 |
|
else line_0="default "$MATCH_CRIT ; fi |
1073 |
|
line_0="$line_0 ----T----- ----S----- ----U----- ----V-----" |
1074 |
|
# line_0=" ----T----- ----S----- ----U----- ----V-----" |
1075 |
line_1="G D M c m s m s m s m s" |
line_1="G D M c m s m s m s m s" |
1076 |
line_2="E p a R g m m e . m m e . m m e . m m e ." |
line_2="E p a R g m m e . m m e . m m e . m m e ." |
1077 |
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
1095 |
else |
else |
1096 |
echo "ADJOINT=true" >> $SUMMARY |
echo "ADJOINT=true" >> $SUMMARY |
1097 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1098 |
|
if [ $MATCH_CRIT -lt 10 ] ; |
1099 |
|
then line_0="default "$MATCH_CRIT ; |
1100 |
|
else line_0="default "$MATCH_CRIT ; fi |
1101 |
|
echo "$line_0" | tee -a $SUMMARY |
1102 |
cat << EOF | tee -a $SUMMARY |
cat << EOF | tee -a $SUMMARY |
1103 |
G D M C G |
G D M C G |
1104 |
E p a R o r |
E p a R o r |
1132 |
# results in the correct location--or skip this directory! |
# results in the correct location--or skip this directory! |
1133 |
fout= |
fout= |
1134 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x ; then |
1135 |
fout=$dir"/results/output.txt" |
fout=$dir"/results/"$ref_outp |
1136 |
else |
else |
1137 |
fout=$dir"/results_ad/output_adm.txt" |
fout=$dir"/results_ad/"$ref_outp |
1138 |
fi |
fi |
1139 |
if test ! -r $fout ; then |
if test ! -r $fout ; then |
1140 |
echo "can't read \"$fout\" -- skipping $dir" |
echo "can't read \"$fout\" -- skipping $dir" |
1149 |
builddir="build" |
builddir="build" |
1150 |
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
1151 |
rundir="run" |
rundir="run" |
|
#rundir=$builddir |
|
1152 |
if test ! -d $dir/$rundir ; then |
if test ! -d $dir/$rundir ; then |
1153 |
rundir=$builddir |
rundir=$builddir |
1154 |
fi |
fi |
1155 |
|
CODE_DIR=$dir/$code_dir |
|
if test "x$ADM" = x ; then |
|
|
code_dir=code |
|
|
CODE_DIR=$dir/code |
|
|
input_dirs='input' |
|
|
else |
|
|
code_dir=code_ad |
|
|
CODE_DIR=$dir/code_ad |
|
|
input_dirs='input_ad input' |
|
|
fi |
|
1156 |
BUILD_DIR=$dir/$builddir |
BUILD_DIR=$dir/$builddir |
1157 |
|
|
1158 |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
1194 |
fi |
fi |
1195 |
echo |
echo |
1196 |
unset genmake makedepend make run |
unset genmake makedepend make run |
1197 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
results=$EMPTY_RESULTS |
1198 |
|
|
1199 |
# Create an output dir for each OPTFILE/tdir combination |
# Create an output dir for each OPTFILE/tdir combination |
1200 |
rel_CDIR=$DRESULTS"/"$dir |
rel_CDIR=$DRESULTS"/"$dir |
1214 |
&& makemodel $dir/$builddir && make=Y \ |
&& makemodel $dir/$builddir && make=Y \ |
1215 |
&& linkdata $dir/$rundir $input_dirs \ |
&& linkdata $dir/$rundir $input_dirs \ |
1216 |
&& runmodel $dir/$rundir && run=Y \ |
&& runmodel $dir/$rundir && run=Y \ |
1217 |
&& results=`testoutput $dir $rundir "txt"` |
&& results=`testoutput_run $dir $rundir $ref_outp` |
1218 |
fi |
fi |
1219 |
|
|
1220 |
echo |
echo |
1221 |
if test "x$ADM" = x ; then |
# if test "x$ADM" = x ; then |
1222 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1223 |
echo |
echo |
1224 |
echo "$fres" >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1225 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
touch $CDIR"/summary.txt" |
1226 |
|
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1227 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1228 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1229 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1231 |
|
|
1232 |
for ex in $extra_runs ; do |
for ex in $extra_runs ; do |
1233 |
unset run |
unset run |
1234 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
results=$EMPTY_RESULTS |
1235 |
# Create an output dir for each OPTFILE/tdir.ex combination |
# Create an output dir for each OPTFILE/tdir.ex combination |
1236 |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
1237 |
mkdir $rel_CDIR |
mkdir $rel_CDIR |
1240 |
run_clean $dir/tr_run.$ex |
run_clean $dir/tr_run.$ex |
1241 |
linkdata $dir/tr_run.$ex input.$ex input |
linkdata $dir/tr_run.$ex input.$ex input |
1242 |
runmodel $dir/tr_run.$ex && run=Y \ |
runmodel $dir/tr_run.$ex && run=Y \ |
1243 |
&& results=`testoutput $dir tr_run.$ex ${ex}".txt"` |
&& results=`testoutput_run $dir tr_run.$ex "output.${ex}.txt"` |
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
|
1244 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1245 |
fres="$fres.$ex" |
fres="$fres.$ex" |
1246 |
echo |
echo |
1247 |
echo "$fres" >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1248 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
touch $CDIR"/summary.txt" |
1249 |
|
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1250 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1251 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1252 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1253 |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
1254 |
if test "x$POSTCLEAN" = xt ; then |
if test "x$POSTCLEAN" = xt ; then |
1255 |
run_clean $dir/tr_run.$ex |
run_clean $dir/tr_run.$ex |
1256 |
fi |
fi |
1257 |
done |
done |
1258 |
else |
# else |
1259 |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
# fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
1260 |
fres=$fres"$results $dir" |
# fres=$fres"$results $dir" |
1261 |
echo |
# echo |
1262 |
echo "$fres" >> $SUMMARY |
# echo "$fres" >> $SUMMARY |
1263 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
# touch $CDIR"/summary.txt" |
1264 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
# echo "fresults='$fres'" >> $CDIR"/summary.txt" |
1265 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
# echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1266 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
# echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1267 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
# echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1268 |
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
# echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1269 |
|
# fi |
1270 |
|
if test "x$ADM" = xt ; then |
1271 |
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
1272 |
>> $CDIR"/summary.txt" |
>> $CDIR"/summary.txt" |
1273 |
fi |
fi |
1274 |
|
|
1314 |
fi |
fi |
1315 |
fi |
fi |
1316 |
|
|
1317 |
# rm -f tmp_cmpnum.f a.out |
rm -f tr_cmpnum.c tr_cmpnum |
|
rm -f tmp_cmpnum.c tmp_cmpnum |
|
1318 |
|
|
1319 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
1320 |
cat $SUMMARY | sed 's/ -- -- -- --//g' |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //' |
1321 |
if test -e tr_out.txt ; then |
if test -e tr_out.txt ; then |
1322 |
mv tr_out.txt tr_out.txt.old |
mv tr_out.txt tr_out.txt.old |
1323 |
fi |
fi |
1324 |
cat $SUMMARY | sed 's/ -- -- -- --//g' > tr_out.txt |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \.//g' > tr_out.txt |
1325 |
fi |
fi |
1326 |
|
|
1327 |
if test "x$DELDIR" = xt ; then |
if test "x$DELDIR" = xt ; then |