13 |
echo " (-help|-h) print usage" |
echo " (-help|-h) print usage" |
14 |
echo " (-mpi) use MPI input files" |
echo " (-mpi) use MPI input files" |
15 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
16 |
echo " (DEF=\"noieee\")" |
echo " (DEF=\"-ieee\")" |
17 |
echo " (-optfile=|-of=)STRING list of optfiles to use" |
echo " (-optfile=|-of=)STRING list of optfiles to use" |
18 |
echo " (-a|-addr) STRING list of email recipients" |
echo " (-a|-addr) STRING list of email recipients" |
19 |
echo " (DEF=\"edhill@mitgcm.org\")" |
echo " (DEF=\"edhill@mitgcm.org\")" |
27 |
echo " (DEF=\"make output.txt\")" |
echo " (DEF=\"make output.txt\")" |
28 |
echo " (-m|-make) STRING command to use for \"make\"" |
echo " (-m|-make) STRING command to use for \"make\"" |
29 |
echo " (DEF=\"make\")" |
echo " (DEF=\"make\")" |
30 |
|
echo " (-odir) STRING used to build output directory name" |
31 |
|
echo " (DEF=\"hostname\")" |
32 |
|
echo " (-ptracers|-ptr) STRING specify which ptracers to test" |
33 |
|
echo " (DEF=\"1 2 3 4 5\")" |
34 |
|
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
35 |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
36 |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
37 |
echo " (-nogenmake|-ng) skip the genmake stage" |
echo " (-nogenmake|-ng) skip the genmake stage" |
38 |
echo " (-noclean|-nc) skip the \"make clean\" stage" |
echo " (-noclean|-nc) skip the \"make clean\" stage" |
39 |
echo " (-nodepend|-nd) skip the \"make depend\" stage" |
echo " (-nodepend|-nd) skip the \"make depend\" stage" |
40 |
|
echo " (-deldir|-dd) on success, delete the output directory" |
41 |
echo |
echo |
42 |
echo "and where STRING follows a whitespace-delimited format" |
echo "and where STRING can be a whitespace-delimited list" |
43 |
echo "such as:" |
echo "such as:" |
44 |
|
echo |
45 |
echo " -t 'exp0 exp2 exp3' " |
echo " -t 'exp0 exp2 exp3' " |
46 |
echo " -addr='abc@123.com testing@home.org'" |
echo " -addr='abc@123.com testing@home.org'" |
47 |
echo |
echo |
48 |
|
echo "provided that the expression is properly quoted within the current" |
49 |
|
echo "shell (note the use of single quotes to protect white space)." |
50 |
|
echo |
51 |
exit 1 |
exit 1 |
52 |
} |
} |
53 |
|
|
97 |
fi |
fi |
98 |
if [ -r $1/$4/output.txt ]; then |
if [ -r $1/$4/output.txt ]; then |
99 |
grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt |
grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt |
100 |
lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
101 |
if [ $lncnt -lt 3 ]; then |
if [ $lncntA -lt 3 ]; then |
102 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
103 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
104 |
fi |
fi |
112 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2 |
113 |
fi |
fi |
114 |
grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt |
grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt |
115 |
lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
116 |
if [ $lncnt -lt 3 ]; then |
if [ $lncntB -lt 3 ]; then |
117 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
118 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
119 |
fi |
fi |
120 |
return 99 |
return 99 |
121 |
fi |
fi |
122 |
|
if [ $lncntA -ne $lncntB ]; then |
123 |
|
if [ $verbose -gt 0 ]; then |
124 |
|
echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
125 |
|
fi |
126 |
|
return 99 |
127 |
|
fi |
128 |
|
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
129 |
|
if [ $has_nan -gt 0 ] ; then |
130 |
|
echo testoutput_for_prop: output.txt contains $has_nan NaN values 1>&2 |
131 |
|
return 99 |
132 |
|
fi |
133 |
|
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
134 |
|
if [ $has_inf -gt 0 ] ; then |
135 |
|
echo testoutput_for_prop: output.txt contains $has_inf Inf values 1>&2 |
136 |
|
return 99 |
137 |
|
fi |
138 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
139 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
140 |
fi |
fi |
181 |
|
|
182 |
testoutput_ad() |
testoutput_ad() |
183 |
{ |
{ |
184 |
grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt |
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $5}' > t05.txt |
185 |
grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt |
grep $3 $1/$2/output_adm.txt | awk '{print NR " " $5}' > t15.txt |
186 |
grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt |
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $6}' > t06.txt |
187 |
grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt |
grep $3 $1/$2/output_adm.txt | awk '{print NR " " $6}' > t16.txt |
188 |
join t05.txt t15.txt > t5.txt |
join t05.txt t15.txt > t5.txt |
189 |
join t06.txt t16.txt > t6.txt |
join t06.txt t16.txt > t6.txt |
190 |
echo "-1" >> t5.txt |
echo "-1" >> t5.txt |
195 |
rm -f t[01][56].txt t[56].txt |
rm -f t[01][56].txt t[56].txt |
196 |
} |
} |
197 |
|
|
198 |
|
check_for_add_mon_output() |
199 |
|
{ |
200 |
|
# Check for additional types of monitor output |
201 |
|
if test "x$1" = x ; then |
202 |
|
return |
203 |
|
fi |
204 |
|
|
205 |
|
for ii in $PTRACERS_NUM ; do |
206 |
|
eval "HAVE_PTR0"$ii"=f" |
207 |
|
done |
208 |
|
|
209 |
|
ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
210 |
|
ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
211 |
|
for ii in $PTRACERS_NUM ; do |
212 |
|
for jj in $ptr_add ; do |
213 |
|
name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
214 |
|
tst=`grep $name $1 | wc -l | awk '{print $1}'` |
215 |
|
if test ! "x$tst" = x0 ; then |
216 |
|
eval "HAVE_PTR0"$ii"=t" |
217 |
|
fi |
218 |
|
done |
219 |
|
# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' |
220 |
|
done |
221 |
|
} |
222 |
|
|
223 |
testoutput() |
testoutput() |
224 |
{ |
{ |
225 |
# testoutput directory subdir extension |
# testoutput directory subdir extension |
249 |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$? |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$? |
250 |
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$? |
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$? |
251 |
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$? |
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$? |
252 |
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
|
253 |
$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
# This is for PTRACERS |
254 |
|
for ii in $PTRACERS_NUM ; do |
255 |
|
eval `echo "p0"$ii"_min=99"` |
256 |
|
eval `echo "p0"$ii"_max=99"` |
257 |
|
eval `echo "p0"$ii"_mean=99"` |
258 |
|
eval `echo "p0"$ii"_sd=99"` |
259 |
|
tst=`eval 'echo "$HAVE_PTR0'$ii'"'` |
260 |
|
#echo 'tst = '$tst |
261 |
|
if test "x$tst" = xt ; then |
262 |
|
a="trcstat_ptracer0" |
263 |
|
testoutput_for_prop $1 "$a"$ii"_min" "p0"$ii"_min" $2 $3 |
264 |
|
RETVAL=$? ; eval `echo "p0"$ii"_min="$RETVAL` |
265 |
|
testoutput_for_prop $1 "$a"$ii"_max" "p0"$ii"_max" $2 $3 |
266 |
|
RETVAL=$? ; eval `echo "p0"$ii"_max="$RETVAL` |
267 |
|
testoutput_for_prop $1 "$a"$ii"_mean" "p0"$ii"_mean" $2 $3 |
268 |
|
RETVAL=$? ; eval `echo "p0"$ii"_mean="$RETVAL` |
269 |
|
testoutput_for_prop $1 "$a"$ii"_sd" "p0"$ii"_sd" $2 $3 |
270 |
|
RETVAL=$? ; eval `echo "p0"$ii"_sd="$RETVAL` |
271 |
|
fi |
272 |
|
done |
273 |
|
|
274 |
|
allargs="$cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd" |
275 |
|
allargs="$allargs $umin $umax $umean $usd $vmin $vmax $vmean $vsd" |
276 |
|
allargs="$allargs $p01_min $p01_max $p01_mean $p01_sd" |
277 |
|
allargs="$allargs $p02_min $p02_max $p02_mean $p02_sd" |
278 |
|
allargs="$allargs $p03_min $p03_max $p03_mean $p03_sd" |
279 |
|
allargs="$allargs $p04_min $p04_max $p04_mean $p04_sd" |
280 |
|
allargs="$allargs $p05_min $p05_max $p05_mean $p05_sd" |
281 |
|
|
282 |
|
eval "dashnum $allargs" |
283 |
|
|
284 |
else |
else |
285 |
testoutput_ad $1 $2 "precision_grdchk_result" |
testoutput_ad $1 $2 "precision_grdchk_result" |
286 |
fi |
fi |
304 |
command="$command --mods=../code" |
command="$command --mods=../code" |
305 |
else |
else |
306 |
command="$command --mods=../code_ad" |
command="$command --mods=../code_ad" |
|
command="$command -adof=../../../tools/adjoint_options/adjoint_staf" |
|
307 |
fi |
fi |
308 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
309 |
command="$command --optfile=$OPTFILE" |
command="$command --optfile=$OPTFILE" |
311 |
if test "x$IEEE" != x ; then |
if test "x$IEEE" != x ; then |
312 |
command="$command -ieee" |
command="$command -ieee" |
313 |
fi |
fi |
314 |
|
if test "x$MPI" = xt ; then |
315 |
|
command="$command -mpi" |
316 |
|
fi |
317 |
printf 'genmake ... ' 1>&2 |
printf 'genmake ... ' 1>&2 |
318 |
$command > make.log 2>&1 |
$command > make.log 2>&1 |
319 |
RETVAL=$? |
RETVAL=$? |
320 |
cp Makefile $CDIR |
# Reduce the size of the testing emails! |
321 |
|
head -100 Makefile > $CDIR/Makefile_head |
322 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
323 |
tail make.log |
tail make.log |
324 |
echo "genmakemodel: genmake failed" 1>&2 |
echo "genmakemodel: genmake failed" 1>&2 |
359 |
fi |
fi |
360 |
} |
} |
361 |
|
|
362 |
|
postclean() |
363 |
|
{ |
364 |
|
# postclean directory |
365 |
|
if test "x$POSTCLEAN" = xt ; then |
366 |
|
( |
367 |
|
cd $1; |
368 |
|
if test -r Makefile ; then |
369 |
|
$MAKE CLEAN >> /dev/null 2>&1 |
370 |
|
fi |
371 |
|
exit 0 |
372 |
|
) |
373 |
|
fi |
374 |
|
} |
375 |
|
|
376 |
makedependmodel() |
makedependmodel() |
377 |
{ |
{ |
378 |
# makedependmodel directory |
# makedependmodel directory |
404 |
if test -r Makefile ; then |
if test -r Makefile ; then |
405 |
printf 'make ... ' 1>&2 |
printf 'make ... ' 1>&2 |
406 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x ; then |
407 |
$MAKE >> make.log 2>&1 |
if test "x$JOBS" = x ; then |
408 |
|
$MAKE >> make.log 2>&1 |
409 |
|
else |
410 |
|
$MAKE -j $JOBS >> make.log 2>&1 |
411 |
|
fi |
412 |
else |
else |
413 |
$MAKE adall >> make.log 2>&1 |
$MAKE adall >> make.log 2>&1 |
414 |
fi |
fi |
435 |
code_dir=$2 |
code_dir=$2 |
436 |
BUILD_DIR=$dir/$3 |
BUILD_DIR=$dir/$3 |
437 |
CODE_DIR=$dir/$code_dir |
CODE_DIR=$dir/$code_dir |
438 |
|
|
439 |
# These are files that should replace their counter-part when using -mpi |
# These are files that should replace their counter-part when using -mpi |
440 |
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
441 |
|
|
450 |
RETVAL=$? |
RETVAL=$? |
451 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
452 |
if ! test -f $BUILD_DIR/$i ; then |
if ! test -f $BUILD_DIR/$i ; then |
453 |
#echo Linking $name to $i |
#echo Linking $name to $i |
454 |
(cd $BUILD_DIR; ln -sf ../$code_dir/$i $name) |
(cd $BUILD_DIR; ln -sf ../$code_dir/$i $name) |
455 |
fi |
fi |
456 |
fi |
fi |
457 |
done |
done |
458 |
else |
else |
459 |
# NO: We undo any _mpi symbolically linked files |
# NO: We undo any _mpi symbolically linked files |
460 |
for ii in $MPI_FILES ; do |
for ii in $MPI_FILES ; do |
461 |
i=`echo $ii | sed 's:^\./::'` |
i=`echo $ii | sed 's:^\./::'` |
462 |
name=`echo $i | sed 's:_mpi::' ` |
name=`echo $i | sed 's:_mpi::' ` |
463 |
if test -L $BUILD_DIR/$name ; then |
if test -L $BUILD_DIR/$name ; then |
464 |
linktarg=`(cd $BUILD_DIR; readlink $name)` |
cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1 |
465 |
if test $linktarg = "../$code_dir/$name"_mpi ; then |
RETVAL=$? |
466 |
#echo Un-linking $name from $linktarg |
if test "x$RETVAL" = x0 ; then |
467 |
|
#echo Un-linking $name from $linktarg |
468 |
rm -f $BUILD_DIR/$name |
rm -f $BUILD_DIR/$name |
469 |
fi |
fi |
470 |
fi |
fi |
484 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x ; then |
485 |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
486 |
for i in $files ; do |
for i in $files ; do |
487 |
if test ! -d "../input/"$i ; then |
if test ! -d "../input/"$i -a ! -f $i ; then |
488 |
ln -sf "../input/"$i $i |
ln -sf "../input/"$i $i |
489 |
fi |
fi |
490 |
done |
done |
491 |
else |
else |
|
files=`( cd ../input ; ls -1 *.bin | grep -v CVS )` |
|
|
for i in $files ; do |
|
|
if test ! -d "../input/"$i ; then |
|
|
ln -sf "../input/"$i $i |
|
|
fi |
|
|
done |
|
492 |
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
493 |
for i in $files ; do |
for i in $files ; do |
494 |
if test ! -d "../input_ad/"$i ; then |
if test ! -d "../input_ad/"$i ; then |
495 |
ln -sf "../input_ad/"$i $i |
ln -sf "../input_ad/"$i $i |
496 |
fi |
fi |
497 |
done |
done |
498 |
|
if test -d "../input" ; then |
499 |
|
files=`( cd ../input ; ls -1 | grep -v CVS )` |
500 |
|
for i in $files ; do |
501 |
|
if test ! -d "../input/"$i ; then |
502 |
|
if test ! -r $i ; then |
503 |
|
ln -sf "../input/"$i $i |
504 |
|
fi |
505 |
|
fi |
506 |
|
done |
507 |
|
fi |
508 |
fi |
fi |
509 |
) |
) |
510 |
fi |
fi |
518 |
# (where "$COMMAND" is relative to "directory") |
# (where "$COMMAND" is relative to "directory") |
519 |
( |
( |
520 |
cd $1 |
cd $1 |
521 |
printf 'runmodel ... ' 1>&2 |
printf 'runmodel in %s ...' $1 1>&2 |
522 |
# make output.txt |
# make output.txt |
523 |
$COMMAND >> run.log 2>&1 |
echo |
524 |
RETVAL=$? |
rm -f run.log |
525 |
|
if test $OUTPUTFILE -ot $EXECUTABLE ; then |
526 |
|
( eval $COMMAND ) > run.log 2>&1 |
527 |
|
RETVAL=$? |
528 |
|
else |
529 |
|
echo " $OUTPUTFILE is up to date " > run.log 2>&1 |
530 |
|
RETVAL=0 |
531 |
|
fi |
532 |
|
# echo "COMMAND='$COMMAND'" |
533 |
|
# echo "pwd='"`pwd`"'" |
534 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
535 |
|
tail run.log |
536 |
echo successful 1>&2 |
echo successful 1>&2 |
537 |
if test "x$ADM" = x ; then |
# === Reduce the size of the testing emails! |
538 |
cp output.txt $CDIR"/output.txt" |
# if test "x$ADM" = x ; then |
539 |
else |
# cp output.txt $CDIR"/output.txt" |
540 |
cp output.txt_adm $CDIR"/output.txt_adm" |
# else |
541 |
fi |
# cp output_adm.txt $CDIR"/output_adm.txt" |
542 |
|
# fi |
543 |
|
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
544 |
return 0 |
return 0 |
545 |
else |
else |
546 |
tail run.log |
tail run.log |
547 |
echo failed 1>&2 |
echo failed 1>&2 |
548 |
cp run.log $CDIR"/run.log" |
cp run.log $CDIR"/run.log" |
549 |
|
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
550 |
return 1 |
return 1 |
551 |
fi |
fi |
552 |
) |
) |
562 |
#include <math.h> |
#include <math.h> |
563 |
int main( int argc, char** argv ) { |
int main( int argc, char** argv ) { |
564 |
int linnum,best,lncnt; |
int linnum,best,lncnt; |
565 |
double a,b,diff; |
double a,b,abave,relerr; |
566 |
best = -16; |
best = -22; |
567 |
lncnt = 0; |
lncnt = 0; |
568 |
while( 1 & (lncnt+=1) < 999 ) { |
while( 1 & (lncnt+=1) < 999 ) { |
569 |
scanf("%d", &linnum); |
scanf("%d", &linnum); |
570 |
if (linnum == -1) break; |
if (linnum == -1) break; |
571 |
scanf("%lf", &a); scanf("%lf", &b); |
scanf("%lf", &a); scanf("%lf", &b); |
572 |
diff = 0.5*(fabs(a)+fabs(b)); |
abave = 0.5*(fabs(a)+fabs(b)); |
573 |
if (diff > 1.e-12) { |
if (abave > 0.0) { |
574 |
diff=fabs(a-b)/diff; |
relerr=fabs(a-b)/abave; |
575 |
if (diff > 0.0) { |
if (relerr > 0.0) { linnum = (int)rint(log10(relerr)); } |
576 |
linnum = (int)log10(diff); |
else { linnum = -16 ; } |
577 |
best = (best > linnum) ? best : linnum; |
best = (best > linnum) ? best : linnum; |
|
} |
|
|
else { |
|
|
if (best == -16 && diff != 0) best = -22; |
|
|
} |
|
578 |
} |
} |
579 |
} |
} |
580 |
if (lncnt == 999) best=-29; |
if (lncnt == 999) best=-29; |
582 |
return 0; |
return 0; |
583 |
} |
} |
584 |
EOF |
EOF |
585 |
cc -o tmp_cmpnum tmp_cmpnum.c -lm |
$CC -o tmp_cmpnum tmp_cmpnum.c -lm |
586 |
|
|
587 |
if [ -x ./tmp_cmpnum ]; then |
if [ -x ./tmp_cmpnum ]; then |
588 |
echo "OK" |
echo "OK" |
589 |
return 0 |
return 0 |
590 |
else |
else |
591 |
echo |
echo |
592 |
echo "ERROR: failed to compile comparison code" |
echo "ERROR: failed to compile comparison code -- please specify" |
593 |
|
echo " a C compiler using the CC environment variable." |
594 |
exit 1 |
exit 1 |
595 |
fi |
fi |
596 |
} |
} |
639 |
|
|
640 |
scandirs() |
scandirs() |
641 |
{ |
{ |
642 |
if [ $# -eq 0 ]; then |
if [ $# -eq 1 ]; then |
643 |
for arg in * ; do |
for arg in * ; do |
644 |
test -d $arg/input && echo $arg |
test -d $arg/$1 && echo $arg |
645 |
done |
done |
646 |
else |
else |
647 |
echo $* |
echo $* |
648 |
fi |
fi |
649 |
} |
} |
650 |
|
|
659 |
expts='' |
expts='' |
660 |
# ieee=1 |
# ieee=1 |
661 |
|
|
662 |
IEEE= |
IEEE=true |
663 |
if test "x$MITGCM_IEEE" != x ; then |
if test "x$MITGCM_IEEE" != x ; then |
664 |
IEEE=$MITGCM_IEEE |
IEEE=$MITGCM_IEEE |
665 |
fi |
fi |
670 |
NOGENMAKE=f |
NOGENMAKE=f |
671 |
NOCLEAN=f |
NOCLEAN=f |
672 |
NODEPEND=f |
NODEPEND=f |
673 |
|
POSTCLEAN=f |
674 |
|
|
675 |
BASH= |
BASH= |
676 |
OPTFILE=NONE |
OPTFILE=NONE |
680 |
HAVE_MPACK= |
HAVE_MPACK= |
681 |
MPACK="$MPACKDIR/mpack" |
MPACK="$MPACKDIR/mpack" |
682 |
COMMAND= |
COMMAND= |
683 |
MAKE=make |
if test "x$MAKE" = x ; then |
684 |
|
MAKE=make |
685 |
|
fi |
686 |
|
if test "x$CC" = x ; then |
687 |
|
CC=cc |
688 |
|
fi |
689 |
|
JOBS= |
690 |
MPI=f |
MPI=f |
691 |
|
OUTDIR= |
692 |
|
DELDIR= |
693 |
|
|
694 |
ADM= |
ADM= |
695 |
|
|
696 |
|
# Additional monitor types |
697 |
|
PTRACERS_NUM="1 2 3 4 5" |
698 |
|
|
699 |
printf "parsing options... " |
printf "parsing options... " |
700 |
|
|
701 |
ac_prev= |
ac_prev= |
745 |
-make=* | --make=*) |
-make=* | --make=*) |
746 |
MAKE=$ac_optarg ;; |
MAKE=$ac_optarg ;; |
747 |
|
|
748 |
|
-odir | --odir) |
749 |
|
ac_prev=OUTDIR ;; |
750 |
|
-odir=* | --odir=*) |
751 |
|
OUTDIR=$ac_optarg ;; |
752 |
|
|
753 |
|
-ptracers | --ptracers | -ptr | --ptr) |
754 |
|
ac_prev=PTRACERS_NUM ;; |
755 |
|
-ptracers=* | --ptracers=* | -ptr=* | --ptr=*) |
756 |
|
PTRACERS_NUM=$ac_optarg ;; |
757 |
|
|
758 |
|
-j) ac_prev=JOBS ;; |
759 |
|
-j=*) JOBS=$ac_optarg ;; |
760 |
|
|
761 |
-clean | --clean) |
-clean | --clean) |
762 |
CLEANUP=t ;; |
CLEANUP=t ; DELDIR=t ;; |
763 |
|
|
764 |
-quick | --quick | -q | --q) |
-quick | --quick | -q | --q) |
765 |
QUICK=t ;; |
QUICK=t ;; |
770 |
-nodepend | --nodepend | -nd | --nd) |
-nodepend | --nodepend | -nd | --nd) |
771 |
NODEPEND=t ;; |
NODEPEND=t ;; |
772 |
|
|
773 |
|
-postclean | --postclean | -pc | --pc) |
774 |
|
POSTCLEAN=t ;; |
775 |
|
|
776 |
-mpi) MPI=t ;; |
-mpi) MPI=t ;; |
777 |
|
|
778 |
-adm | -ad) ADM=t ;; |
-adm | -ad) ADM=t ;; |
784 |
-debug) debug=1 ;; |
-debug) debug=1 ;; |
785 |
-quiet) verbose=0 ;; |
-quiet) verbose=0 ;; |
786 |
|
|
787 |
|
-deldir | -dd) DELDIR=t ;; |
788 |
|
|
789 |
-*) |
-*) |
790 |
echo "Error: unrecognized option: "$ac_option |
echo "Error: unrecognized option: "$ac_option |
791 |
usage |
usage |
807 |
fi |
fi |
808 |
|
|
809 |
if test "x$TESTDIRS" = x ; then |
if test "x$TESTDIRS" = x ; then |
810 |
TESTDIRS=`scandirs` |
if test "x$ADM" = xt ; then |
811 |
|
TESTDIRS=`scandirs results_ad` |
812 |
|
else |
813 |
|
TESTDIRS=`scandirs results` |
814 |
|
fi |
815 |
fi |
fi |
816 |
|
|
817 |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
818 |
OPTFILE=$MITGCM_OF |
OPTFILE=$MITGCM_OF |
819 |
fi |
fi |
820 |
|
|
821 |
|
if test "x$ADM" = xt ; then |
822 |
|
EXECUTABLE="mitgcmuv_ad" |
823 |
|
OUTPUTFILE="output_adm.txt" |
824 |
|
else |
825 |
|
EXECUTABLE="mitgcmuv" |
826 |
|
OUTPUTFILE="output.txt" |
827 |
|
fi |
828 |
|
|
829 |
if test "x$ADM" = xt -a "x$COMMAND" = x ; then |
if test "x$ADM" = xt -a "x$COMMAND" = x ; then |
830 |
COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1" |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
831 |
fi |
fi |
832 |
|
|
833 |
if test "x$COMMAND" = x ; then |
if test "x$COMMAND" = x ; then |
834 |
COMMAND="make output.txt" |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
835 |
fi |
fi |
836 |
|
|
837 |
echo "OK" |
#echo "OK" |
838 |
|
echo "OK (COMMAND= $COMMAND )" |
839 |
|
|
840 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
841 |
createcodelet |
createcodelet |
852 |
UNAMEA=`uname -a` |
UNAMEA=`uname -a` |
853 |
DATE=`date +%Y%m%d` |
DATE=`date +%Y%m%d` |
854 |
BASE="tr_"$MACH"_"$DATE"_" |
BASE="tr_"$MACH"_"$DATE"_" |
855 |
|
if test "x$OUTDIR" != x ; then |
856 |
|
BASE="tr_"$OUTDIR"_"$DATE"_" |
857 |
|
fi |
858 |
DNUM=0 |
DNUM=0 |
859 |
DRESULTS="$BASE$DNUM" |
DRESULTS="$BASE$DNUM" |
860 |
while test -e $DRESULTS ; do |
while test -e $DRESULTS ; do |
900 |
echo |
echo |
901 |
echo >> $SUMMARY |
echo >> $SUMMARY |
902 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x ; then |
903 |
cat << EOF | tee -a $SUMMARY |
line_0=" ----T----- ----S----- ----U----- ----V-----" |
904 |
T S U V |
line_1="G D M c m s m s m s m s" |
905 |
G D M c m s m s m s m s |
line_2="E p a R g m m e . m m e . m m e . m m e ." |
906 |
E p a R g m m e . m m e . m m e . m m e . |
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
907 |
N n k u 2 i a a d i a a d i a a d i a a d |
line_4="2 d e n d n x n . n x n . n x n . n x n ." |
908 |
2 d e n d n x n . n x n . n x n . n x n . |
for ii in $PTRACERS_NUM ; do |
909 |
|
# tst=`eval 'echo $HAVE_PTR0'$ii` |
910 |
EOF |
# if test "x$tst" = xt ; then |
911 |
|
line_0="$line_0 --PTR 0"$ii"--" |
912 |
|
line_1="$line_1 m s" |
913 |
|
line_2="$line_2 m m e ." |
914 |
|
line_3="$line_3 i a a d" |
915 |
|
line_4="$line_4 n x n ." |
916 |
|
# fi |
917 |
|
done |
918 |
|
echo "$line_0" | tee -a $SUMMARY |
919 |
|
echo "$line_1" | tee -a $SUMMARY |
920 |
|
echo "$line_2" | tee -a $SUMMARY |
921 |
|
echo "$line_3" | tee -a $SUMMARY |
922 |
|
echo "$line_4" | tee -a $SUMMARY |
923 |
|
echo " " | tee -a $SUMMARY |
924 |
else |
else |
925 |
echo "ADJOINT=true" >> $SUMMARY |
echo "ADJOINT=true" >> $SUMMARY |
926 |
echo >> $SUMMARY |
echo >> $SUMMARY |
944 |
if test -r $dir/input/Makefile ; then |
if test -r $dir/input/Makefile ; then |
945 |
( cd $dir/input ; make CLEAN ) |
( cd $dir/input ; make CLEAN ) |
946 |
fi |
fi |
947 |
|
( |
948 |
|
cd $dir |
949 |
|
rm -rf tr_run.* |
950 |
|
) |
951 |
continue |
continue |
952 |
fi |
fi |
953 |
|
|
957 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x ; then |
958 |
fout=$dir"/results/output.txt" |
fout=$dir"/results/output.txt" |
959 |
else |
else |
960 |
fout=$dir"/results_ad/output.txt_adm" |
fout=$dir"/results_ad/output_adm.txt" |
961 |
fi |
fi |
962 |
if test ! -r $fout ; then |
if test ! -r $fout ; then |
963 |
echo "can't read \"$fout\" -- skipping $dir" |
echo "can't read \"$fout\" -- skipping $dir" |
964 |
continue |
continue |
965 |
fi |
fi |
966 |
|
if test "x$ADM" = x ; then |
967 |
|
check_for_add_mon_output $fout |
968 |
|
fi |
969 |
|
|
970 |
|
# Check for additional types of monitor output |
971 |
|
|
972 |
builddir="input" |
builddir="input" |
973 |
rundir="input" |
rundir="input" |
1012 |
echo "Experiment: $dir" |
echo "Experiment: $dir" |
1013 |
echo |
echo |
1014 |
unset genmake makedepend make run |
unset genmake makedepend make run |
1015 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
1016 |
|
|
1017 |
# Create an output dir for each OPTFILE/tdir combination |
# Create an output dir for each OPTFILE/tdir combination |
1018 |
rel_CDIR=$DRESULTS"/"$dir |
rel_CDIR=$DRESULTS"/"$dir |
1043 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1044 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1045 |
|
|
|
OLD_COMMAND=$COMMAND |
|
|
COMMAND="./mitgcmuv > output.txt" |
|
1046 |
for ex in $extra_runs ; do |
for ex in $extra_runs ; do |
1047 |
test -e "$dir/tr_run" && rm -rf "$dir/tr_run" |
unset run |
1048 |
mkdir "$dir/tr_run" |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
1049 |
( cd "$dir/input" ; links=`ls -1 | grep -v CVS` ) |
# Create an output dir for each OPTFILE/tdir.ex combination |
1050 |
|
rel_CDIR=$DRESULTS"/"$dir"."$ex |
1051 |
|
mkdir $rel_CDIR |
1052 |
|
CDIR=`pwd`"/$rel_CDIR" |
1053 |
|
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
1054 |
|
for ldir in input.$ex input ; do |
1055 |
|
( |
1056 |
|
cd "$dir/$ldir" > /dev/null 2>&1 |
1057 |
|
ls -1 2>/dev/null \ |
1058 |
|
| sed -e 's|^CVS$||g' | sed -e 's|^output.txt$||g' |
1059 |
|
) > tr_exrun_links |
1060 |
|
( |
1061 |
|
cd "$dir/tr_run.$ex" |
1062 |
|
cat ../../tr_exrun_links | while read i ; do |
1063 |
|
if test ! "x$i" = x ; then |
1064 |
|
test ! -r $i && ln -s "../"$ldir"/"$i $i |
1065 |
|
fi |
1066 |
|
done |
1067 |
|
) |
1068 |
|
test -e tr_exrun_links && rm -f tr_exrun_links |
1069 |
|
done |
1070 |
|
ldir=build |
1071 |
( |
( |
1072 |
cd "$dir/tr_run" |
cd $dir/tr_run.$ex |
1073 |
for i in $links; do |
test ! -e mitgcmuv && ln -s "../"$ldir"/"mitgcmuv . |
|
ln -s ../input/$i $i |
|
|
done |
|
1074 |
) |
) |
1075 |
( cd "$dir/input.$ex" ; links=`ls -1 | grep -v CVS` ) |
runmodel $dir/tr_run.$ex && run=Y \ |
1076 |
( |
&& results=`testoutput $dir tr_run.$ex "."$ex` |
|
cd "$dir/tr_run" |
|
|
for i in $links; do |
|
|
test -e $i && rm -f $i |
|
|
ln -s ../input.$ex/$i $i |
|
|
done |
|
|
ln -s ../$builddir/mitgcmuv mitgcmuv |
|
|
) |
|
|
runmodel $dir/tr_run && run=Y \ |
|
|
&& results=`testoutput $dir $rundir "."$ex` |
|
1077 |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
1078 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1079 |
fres="$fres.$ex" |
fres="$fres.$ex" |
1083 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1084 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1085 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1086 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
1087 |
done |
done |
|
COMMAND=$OLD_COMMAND |
|
1088 |
else |
else |
1089 |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
1090 |
fres=$fres"$results $dir" |
fres=$fres"$results $dir" |
1095 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1096 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1097 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1098 |
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
1099 |
|
>> $CDIR"/summary.txt" |
1100 |
fi |
fi |
1101 |
|
|
1102 |
|
postclean $dir/$builddir |
1103 |
|
|
1104 |
echo "-------------------------------------------------------------------------------" |
echo "-------------------------------------------------------------------------------" |
1105 |
|
|
1118 |
if test "x$HAVE_MPACK" = xt ; then |
if test "x$HAVE_MPACK" = xt ; then |
1119 |
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
1120 |
&& gzip $DRESULTS".tar" \ |
&& gzip $DRESULTS".tar" \ |
1121 |
&& $MPACK -s MITgcm-test -m 1500000 $DRESULTS".tar.gz" $ADDRESSES |
&& $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES |
1122 |
RETVAL=$? |
RETVAL=$? |
1123 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
1124 |
echo |
echo |
1141 |
rm -f tmp_cmpnum.c tmp_cmpnum |
rm -f tmp_cmpnum.c tmp_cmpnum |
1142 |
|
|
1143 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
1144 |
cat $SUMMARY |
cat $SUMMARY | sed 's/ -- -- -- --//g' |
1145 |
if test -e tr_out.txt ; then |
if test -e tr_out.txt ; then |
1146 |
mv tr_out.txt tr_out.txt.old |
mv tr_out.txt tr_out.txt.old |
1147 |
fi |
fi |
1148 |
cat $SUMMARY > tr_out.txt |
cat $SUMMARY | sed 's/ -- -- -- --//g' > tr_out.txt |
1149 |
|
fi |
1150 |
|
|
1151 |
|
if test "x$DELDIR" = xt ; then |
1152 |
|
rm -rf $DRESULTS |
1153 |
fi |
fi |
1154 |
|
|