1 |
#!/bin/bash |
#! /usr/bin/env bash |
2 |
# |
# |
3 |
# $Header$ |
# $Header$ |
4 |
# $Name$ |
# $Name$ |
13 |
echo " (-help|-h) print usage" |
echo " (-help|-h) print usage" |
14 |
echo " (-mpi) use MPI input files" |
echo " (-mpi) use MPI input files" |
15 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
16 |
|
echo " (DEF=\"-ieee\")" |
17 |
echo " (-optfile=|-of=)STRING list of optfiles to use" |
echo " (-optfile=|-of=)STRING list of optfiles to use" |
18 |
echo " (-a|-addr)STRING list of email recipients" |
echo " (-a|-addr) STRING list of email recipients" |
19 |
echo " (DEF=\"edhill@mitgcm.org\")" |
echo " (DEF=\"edhill@mitgcm.org\")" |
20 |
echo " (-t|-tdir)STRING list of test dirs to use" |
echo " (-t|-tdir) STRING list of test dirs to use" |
21 |
echo " (DEF=\"\" which builds all)" |
echo " (DEF=\"\" which builds all)" |
22 |
echo " (-b|-bash)STRING location of \"bash\" executable" |
echo " (-b|-bash) STRING preferred location of a \"bash\" or" |
23 |
echo " (DEF=\"\" for \"/bin/bash\")" |
echo " Bourne-compatible \"sh\" shell" |
24 |
echo " (-command)STRING command to run" |
echo " (DEF=\"\" for \"bash\")" |
25 |
|
echo " (-adm|-ad) perform an adjoint run" |
26 |
|
echo " (-command) STRING command to run" |
27 |
echo " (DEF=\"make output.txt\")" |
echo " (DEF=\"make output.txt\")" |
28 |
echo " (-m|-make)STRING command to use for \"make\"" |
echo " (-m|-make) STRING command to use for \"make\"" |
29 |
echo " (DEF=\"make\")" |
echo " (DEF=\"make\")" |
30 |
|
echo " (-odir) STRING used to build output directory name" |
31 |
|
echo " (DEF=\"hostname\")" |
32 |
|
echo " (-ptracers|-ptr) STRING specify which ptracers to test" |
33 |
|
echo " (DEF=\"1 2 3 4 5\")" |
34 |
|
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
35 |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
36 |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
37 |
echo " (-nogenmake|-ng) skip the genmake stage" |
echo " (-nogenmake|-ng) skip the genmake stage" |
38 |
echo " (-noclean|-nc) skip the \"make clean\" stage" |
echo " (-noclean|-nc) skip the \"make clean\" stage" |
39 |
echo " (-nodepend|-nd) skip the \"make depend\" stage" |
echo " (-nodepend|-nd) skip the \"make depend\" stage" |
40 |
|
echo " (-deldir|-dd) on success, delete the output directory" |
41 |
echo |
echo |
42 |
echo "and where STRING follows a whitespace-delimited format" |
echo "and where STRING can be a whitespace-delimited list" |
43 |
echo "such as:" |
echo "such as:" |
44 |
|
echo |
45 |
echo " -t 'exp0 exp2 exp3' " |
echo " -t 'exp0 exp2 exp3' " |
46 |
echo " -addr='abc@123.com testing@home.org'" |
echo " -addr='abc@123.com testing@home.org'" |
47 |
echo |
echo |
48 |
|
echo "provided that the expression is properly quoted within the current" |
49 |
|
echo "shell (note the use of single quotes to protect white space)." |
50 |
|
echo |
51 |
exit 1 |
exit 1 |
52 |
} |
} |
53 |
|
|
54 |
# build the mpack utility |
# build the mpack utility |
55 |
build_mpack() |
build_mpack() |
56 |
{ |
{ |
57 |
echo -n "building the mpack utility... " |
printf "building the mpack utility... " |
58 |
if test ! -x "$MPACKDIR/mpack" ; then |
if test ! -x "$MPACKDIR/mpack" ; then |
59 |
if test ! -d $MPACKDIR ; then |
if test ! -d $MPACKDIR ; then |
60 |
|
echo |
61 |
echo "Error: can't find \"$MPACKDIR\"" |
echo "Error: can't find \"$MPACKDIR\"" |
62 |
echo " are you sure this program is being run in the correct " |
echo " are you sure this program is being run in the correct " |
63 |
echo " (that is, \"MITGCM_ROOT\verification\") directory?" |
echo " (that is, \"MITGCM_ROOT\verification\") directory?" |
64 |
exit 1 |
echo |
65 |
|
HAVE_MPACK=f |
66 |
|
fi |
67 |
|
printf "building mpack... " |
68 |
|
if test "x$CC" = x ; then |
69 |
|
export CC=cc |
70 |
fi |
fi |
71 |
echo -n "building mpack... " |
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
|
( cd $MPACKDIR && ./configure && $MAKE ) > build_mpack.out 2>&1 |
|
72 |
RETVAL=$? |
RETVAL=$? |
73 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
74 |
echo |
echo |
75 |
echo "Error building the mpack tools at: $MPACK_DIR" |
echo "Error building the mpack tools at: $MPACK_DIR" |
76 |
exit 1 |
echo |
77 |
|
HAVE_MPACK=f |
78 |
|
else |
79 |
|
rm -f tr_build_mpack.out |
80 |
|
HAVE_MPACK=t |
81 |
fi |
fi |
82 |
|
else |
83 |
|
HAVE_MPACK=t |
84 |
fi |
fi |
85 |
echo "OK" |
echo "OK" |
86 |
} |
} |
87 |
|
|
|
compare_lines() |
|
|
{ |
|
|
# use codelet to compare lines |
|
|
if [ $verbose -gt 1 ]; then |
|
|
cat tmp3.txt 1>&2 |
|
|
fi |
|
|
return `./a.out < tmp3.txt` |
|
|
} |
|
|
|
|
88 |
testoutput_for_prop() |
testoutput_for_prop() |
89 |
{ |
{ |
90 |
# testoutput_for_prop dir s1 label subdir |
# testoutput_for_prop dir s1 label subdir extension |
91 |
# |
# |
92 |
# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
93 |
# using search strings s1 and text label |
# using search strings s1 and text label |
96 |
echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
97 |
fi |
fi |
98 |
if [ -r $1/$4/output.txt ]; then |
if [ -r $1/$4/output.txt ]; then |
99 |
grep "$2" $1/$4/output.txt | sed 's/.*=//' | nl > tmp1.txt |
grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt |
100 |
lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
101 |
if [ $lncnt -lt 3 ]; then |
if [ $lncntA -lt 3 ]; then |
102 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
103 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
104 |
fi |
fi |
109 |
return 99 |
return 99 |
110 |
fi |
fi |
111 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
112 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2 |
113 |
fi |
fi |
114 |
grep "$2" $1/results/output.txt | sed 's/.*=//' | nl > tmp2.txt |
grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt |
115 |
lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
116 |
if [ $lncnt -lt 3 ]; then |
if [ $lncntB -lt 3 ]; then |
117 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
118 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
119 |
fi |
fi |
120 |
return 99 |
return 99 |
121 |
fi |
fi |
122 |
|
if [ $lncntA -ne $lncntB ]; then |
123 |
|
if [ $verbose -gt 0 ]; then |
124 |
|
echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
125 |
|
fi |
126 |
|
return 99 |
127 |
|
fi |
128 |
|
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
129 |
|
if [ $has_nan -gt 0 ] ; then |
130 |
|
echo testoutput_for_prop: output.txt contains $has_nan NaN values 1>&2 |
131 |
|
return 99 |
132 |
|
fi |
133 |
|
has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
134 |
|
if [ $has_inf -gt 0 ] ; then |
135 |
|
echo testoutput_for_prop: output.txt contains $has_inf Inf values 1>&2 |
136 |
|
return 99 |
137 |
|
fi |
138 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
139 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
140 |
fi |
fi |
142 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
143 |
echo testoutput_for_prop: compare_lines 1>&2 |
echo testoutput_for_prop: compare_lines 1>&2 |
144 |
fi |
fi |
145 |
compare_lines |
if [ $verbose -gt 1 ]; then |
146 |
digits_of_similarity=$? |
cat tmp3.txt 1>&2 |
147 |
|
fi |
148 |
|
echo "-1" >> tmp3.txt |
149 |
|
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
150 |
|
cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
151 |
|
digits_of_similarity=`./tmp_cmpnum < tmp4.txt` |
152 |
if [ $digits_of_similarity -eq 99 ]; then |
if [ $digits_of_similarity -eq 99 ]; then |
153 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
154 |
echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
159 |
echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
160 |
fi |
fi |
161 |
fi |
fi |
162 |
rm tmp1.txt tmp2.txt tmp3.txt |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
163 |
|
|
164 |
return $digits_of_similarity |
return $digits_of_similarity |
165 |
} |
} |
179 |
done |
done |
180 |
} |
} |
181 |
|
|
182 |
|
testoutput_ad() |
183 |
|
{ |
184 |
|
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $5}' > t05.txt |
185 |
|
grep $3 $1/$2/output_adm.txt | awk '{print NR " " $5}' > t15.txt |
186 |
|
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $6}' > t06.txt |
187 |
|
grep $3 $1/$2/output_adm.txt | awk '{print NR " " $6}' > t16.txt |
188 |
|
join t05.txt t15.txt > t5.txt |
189 |
|
join t06.txt t16.txt > t6.txt |
190 |
|
echo "-1" >> t5.txt |
191 |
|
echo "-1" >> t6.txt |
192 |
|
digits_5=`./tmp_cmpnum < t5.txt` |
193 |
|
digits_6=`./tmp_cmpnum < t6.txt` |
194 |
|
dashnum $digits_5 $digits_6 |
195 |
|
rm -f t[01][56].txt t[56].txt |
196 |
|
} |
197 |
|
|
198 |
|
check_for_add_mon_output() |
199 |
|
{ |
200 |
|
# Check for additional types of monitor output |
201 |
|
if test "x$1" = x ; then |
202 |
|
return |
203 |
|
fi |
204 |
|
|
205 |
|
for ii in $PTRACERS_NUM ; do |
206 |
|
eval "HAVE_PTR0"$ii"=f" |
207 |
|
done |
208 |
|
|
209 |
|
ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
210 |
|
ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
211 |
|
for ii in $PTRACERS_NUM ; do |
212 |
|
for jj in $ptr_add ; do |
213 |
|
name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
214 |
|
tst=`grep $name $1 | wc -l | awk '{print $1}'` |
215 |
|
if test ! "x$tst" = x0 ; then |
216 |
|
eval "HAVE_PTR0"$ii"=t" |
217 |
|
fi |
218 |
|
done |
219 |
|
# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' |
220 |
|
done |
221 |
|
} |
222 |
|
|
223 |
testoutput() |
testoutput() |
224 |
{ |
{ |
225 |
# testoutput diretory subdir |
# testoutput directory subdir extension |
226 |
# |
# |
227 |
# test output in "directory" |
# test output in "directory" |
228 |
|
if test "x$ADM" = x ; then |
229 |
|
if [ $debug -gt 0 ]; then |
230 |
|
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
231 |
|
fi |
232 |
|
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$? |
233 |
|
if [ $debug -gt 0 ]; then |
234 |
|
echo testoutput: cg2dres=$cg2dres 1>&2 |
235 |
|
fi |
236 |
|
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$? |
237 |
|
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$? |
238 |
|
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$? |
239 |
|
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$? |
240 |
|
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$? |
241 |
|
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$? |
242 |
|
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$? |
243 |
|
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$? |
244 |
|
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$? |
245 |
|
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$? |
246 |
|
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$? |
247 |
|
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$? |
248 |
|
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$? |
249 |
|
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$? |
250 |
|
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$? |
251 |
|
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$? |
252 |
|
|
253 |
|
# This is for PTRACERS |
254 |
|
for ii in $PTRACERS_NUM ; do |
255 |
|
eval `echo "p0"$ii"_min=99"` |
256 |
|
eval `echo "p0"$ii"_max=99"` |
257 |
|
eval `echo "p0"$ii"_mean=99"` |
258 |
|
eval `echo "p0"$ii"_sd=99"` |
259 |
|
tst=`eval 'echo "$HAVE_PTR0'$ii'"'` |
260 |
|
#echo 'tst = '$tst |
261 |
|
if test "x$tst" = xt ; then |
262 |
|
a="trcstat_ptracer0" |
263 |
|
testoutput_for_prop $1 "$a"$ii"_min" "p0"$ii"_min" $2 $3 |
264 |
|
RETVAL=$? ; eval `echo "p0"$ii"_min="$RETVAL` |
265 |
|
testoutput_for_prop $1 "$a"$ii"_max" "p0"$ii"_max" $2 $3 |
266 |
|
RETVAL=$? ; eval `echo "p0"$ii"_max="$RETVAL` |
267 |
|
testoutput_for_prop $1 "$a"$ii"_mean" "p0"$ii"_mean" $2 $3 |
268 |
|
RETVAL=$? ; eval `echo "p0"$ii"_mean="$RETVAL` |
269 |
|
testoutput_for_prop $1 "$a"$ii"_sd" "p0"$ii"_sd" $2 $3 |
270 |
|
RETVAL=$? ; eval `echo "p0"$ii"_sd="$RETVAL` |
271 |
|
fi |
272 |
|
done |
273 |
|
|
274 |
if [ $debug -gt 0 ]; then |
allargs="$cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd" |
275 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
allargs="$allargs $umin $umax $umean $usd $vmin $vmax $vmean $vsd" |
276 |
fi |
allargs="$allargs $p01_min $p01_max $p01_mean $p01_sd" |
277 |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$? |
allargs="$allargs $p02_min $p02_max $p02_mean $p02_sd" |
278 |
if [ $debug -gt 0 ]; then |
allargs="$allargs $p03_min $p03_max $p03_mean $p03_sd" |
279 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
allargs="$allargs $p04_min $p04_max $p04_mean $p04_sd" |
280 |
|
allargs="$allargs $p05_min $p05_max $p05_mean $p05_sd" |
281 |
|
|
282 |
|
eval "dashnum $allargs" |
283 |
|
|
284 |
|
else |
285 |
|
testoutput_ad $1 $2 "precision_grdchk_result" |
286 |
fi |
fi |
|
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
|
|
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
|
|
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$? |
|
|
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$? |
|
|
|
|
|
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
|
|
$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
|
287 |
} |
} |
288 |
|
|
289 |
genmakemodel() |
genmakemodel() |
292 |
if test "x$NOGENMAKE" = xt ; then |
if test "x$NOGENMAKE" = xt ; then |
293 |
echo "genmake skipped!" |
echo "genmake skipped!" |
294 |
else |
else |
295 |
GENMAKE2="$BASH ../../../tools/genmake2" |
if test "x$BASH" = x ; then |
296 |
|
GENMAKE2="../../../tools/genmake2" |
297 |
|
else |
298 |
|
GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH" |
299 |
|
fi |
300 |
( |
( |
301 |
cd $1; |
cd $1; |
302 |
command="$GENMAKE2 -ds -m $MAKE --mods=../code" |
command="$GENMAKE2 -ds -m $MAKE" |
303 |
|
if test "x$ADM" = x ; then |
304 |
|
command="$command --mods=../code" |
305 |
|
else |
306 |
|
command="$command --mods=../code_ad" |
307 |
|
fi |
308 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
309 |
command="$command --optfile=$OPTFILE" |
command="$command --optfile=$OPTFILE" |
|
# echo " command=\"$command\"" |
|
310 |
fi |
fi |
311 |
if test "x$IEEE" != x ; then |
if test "x$IEEE" != x ; then |
312 |
command="$command -ieee" |
command="$command -ieee" |
313 |
fi |
fi |
314 |
# echo "command: \"$command\"" |
if test "x$MPI" = xt ; then |
315 |
|
command="$command -mpi" |
316 |
|
fi |
317 |
printf 'genmake ... ' 1>&2 |
printf 'genmake ... ' 1>&2 |
318 |
$command > make.log 2>&1 |
$command > make.log 2>&1 |
319 |
RETVAL=$? |
RETVAL=$? |
320 |
for i in genmake_state genmake_optfile genmake_local Makefile ; do |
# Reduce the size of the testing emails! |
321 |
if test -r $i ; then |
head -100 Makefile > $CDIR/Makefile_head |
|
cp $i $CDIR |
|
|
fi |
|
|
done |
|
322 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
323 |
tail make.log |
tail make.log |
324 |
echo "genmakemodel: genmake failed" 1>&2 |
echo "genmakemodel: genmake failed" 1>&2 |
325 |
cp make.log $CDIR |
cp genmake_* make.log $CDIR |
326 |
return 1 |
return 1 |
327 |
else |
else |
328 |
echo "succesful" 1>&2 |
echo "successful" 1>&2 |
329 |
fi |
fi |
330 |
) |
) |
331 |
fi |
fi |
353 |
return 1 |
return 1 |
354 |
fi |
fi |
355 |
fi |
fi |
356 |
echo succesful 1>&2 |
echo successful 1>&2 |
357 |
|
exit 0 |
358 |
|
) |
359 |
|
fi |
360 |
|
} |
361 |
|
|
362 |
|
postclean() |
363 |
|
{ |
364 |
|
# postclean directory |
365 |
|
if test "x$POSTCLEAN" = xt ; then |
366 |
|
( |
367 |
|
cd $1; |
368 |
|
if test -r Makefile ; then |
369 |
|
$MAKE CLEAN >> /dev/null 2>&1 |
370 |
|
fi |
371 |
exit 0 |
exit 0 |
372 |
) |
) |
373 |
fi |
fi |
390 |
cp make.log $CDIR"/make.log" |
cp make.log $CDIR"/make.log" |
391 |
return 1 |
return 1 |
392 |
else |
else |
393 |
echo succesful 1>&2 |
echo successful 1>&2 |
394 |
fi |
fi |
395 |
) |
) |
396 |
fi |
fi |
403 |
cd $1; |
cd $1; |
404 |
if test -r Makefile ; then |
if test -r Makefile ; then |
405 |
printf 'make ... ' 1>&2 |
printf 'make ... ' 1>&2 |
406 |
$MAKE >> make.log 2>&1 |
if test "x$ADM" = x ; then |
407 |
|
if test "x$JOBS" = x ; then |
408 |
|
$MAKE >> make.log 2>&1 |
409 |
|
else |
410 |
|
$MAKE -j $JOBS >> make.log 2>&1 |
411 |
|
fi |
412 |
|
else |
413 |
|
$MAKE adall >> make.log 2>&1 |
414 |
|
fi |
415 |
RETVAL=$? |
RETVAL=$? |
416 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
417 |
tail make.log |
tail make.log |
419 |
cp make.log $CDIR"/make.log" |
cp make.log $CDIR"/make.log" |
420 |
return 1 |
return 1 |
421 |
else |
else |
422 |
echo succesful 1>&2 |
echo successful 1>&2 |
423 |
fi |
fi |
424 |
fi |
fi |
425 |
) |
) |
426 |
} |
} |
427 |
|
|
428 |
|
symlink_mpifiles() |
429 |
|
{ |
430 |
|
# Put special links so that MPI specific files are used |
431 |
|
# This MUST be invoked between makeclean and makelinks because |
432 |
|
# the Makefile will link to non-mpi files by default |
433 |
|
|
434 |
|
dir=$1 |
435 |
|
code_dir=$2 |
436 |
|
BUILD_DIR=$dir/$3 |
437 |
|
CODE_DIR=$dir/$code_dir |
438 |
|
|
439 |
|
# These are files that should replace their counter-part when using -mpi |
440 |
|
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
441 |
|
|
442 |
|
# Is this an MPI run? |
443 |
|
if test "x$MPI" = xt ; then |
444 |
|
# YES: We symbolically link these files to the build |
445 |
|
# dir so long as there is no real file in place |
446 |
|
for ii in $MPI_FILES ; do |
447 |
|
i=`echo $ii | sed 's:^\./::'` |
448 |
|
name=`echo $i | sed 's:_mpi::' ` |
449 |
|
cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1 |
450 |
|
RETVAL=$? |
451 |
|
if test "x$RETVAL" != x0 ; then |
452 |
|
if ! test -f $BUILD_DIR/$i ; then |
453 |
|
#echo Linking $name to $i |
454 |
|
(cd $BUILD_DIR; ln -sf ../$code_dir/$i $name) |
455 |
|
fi |
456 |
|
fi |
457 |
|
done |
458 |
|
else |
459 |
|
# NO: We undo any _mpi symbolically linked files |
460 |
|
for ii in $MPI_FILES ; do |
461 |
|
i=`echo $ii | sed 's:^\./::'` |
462 |
|
name=`echo $i | sed 's:_mpi::' ` |
463 |
|
if test -L $BUILD_DIR/$name ; then |
464 |
|
cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1 |
465 |
|
RETVAL=$? |
466 |
|
if test "x$RETVAL" = x0 ; then |
467 |
|
#echo Un-linking $name from $linktarg |
468 |
|
rm -f $BUILD_DIR/$name |
469 |
|
fi |
470 |
|
fi |
471 |
|
done |
472 |
|
fi |
473 |
|
|
474 |
|
} |
475 |
|
|
476 |
linkdata() |
linkdata() |
477 |
{ |
{ |
478 |
# linkdata flag |
# linkdata flag |
481 |
if test "x$1" = x1 ; then |
if test "x$1" = x1 ; then |
482 |
( |
( |
483 |
cd $2 |
cd $2 |
484 |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
if test "x$ADM" = x ; then |
485 |
for i in $files ; do |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
486 |
if test ! -d "../input/"$i ; then |
for i in $files ; do |
487 |
ln -sf "../input/"$i $i |
if test ! -d "../input/"$i -a ! -f $i ; then |
488 |
fi |
ln -sf "../input/"$i $i |
489 |
done |
fi |
490 |
|
done |
491 |
|
else |
492 |
|
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
493 |
|
for i in $files ; do |
494 |
|
if test ! -d "../input_ad/"$i ; then |
495 |
|
ln -sf "../input_ad/"$i $i |
496 |
|
fi |
497 |
|
done |
498 |
|
files=`( cd ../input ; ls -1 | grep -v CVS )` |
499 |
|
for i in $files ; do |
500 |
|
if test ! -d "../input/"$i ; then |
501 |
|
if test ! -r $i ; then |
502 |
|
ln -sf "../input/"$i $i |
503 |
|
fi |
504 |
|
fi |
505 |
|
done |
506 |
|
fi |
507 |
) |
) |
508 |
fi |
fi |
509 |
} |
} |
512 |
{ |
{ |
513 |
# runmodel directory |
# runmodel directory |
514 |
# |
# |
515 |
# runs "$COMMAND" in "directory" |
# runs "$COMMAND in "directory" |
516 |
# (where "$COMMAND" is relative to "directory") |
# (where "$COMMAND" is relative to "directory") |
517 |
( |
( |
518 |
cd $1 |
cd $1 |
519 |
printf 'runmodel: ' 1>&2 |
printf 'runmodel in %s ...' $1 1>&2 |
520 |
# make output.txt |
# make output.txt |
521 |
$COMMAND |
echo |
522 |
RETVAL=$? |
rm -f run.log |
523 |
|
if test $OUTPUTFILE -ot $EXECUTABLE ; then |
524 |
|
( eval $COMMAND ) > run.log 2>&1 |
525 |
|
RETVAL=$? |
526 |
|
else |
527 |
|
echo " $OUTPUTFILE is up to date " > run.log 2>&1 |
528 |
|
RETVAL=0 |
529 |
|
fi |
530 |
|
# echo "COMMAND='$COMMAND'" |
531 |
|
# echo "pwd='"`pwd`"'" |
532 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
533 |
cp output.txt $CDIR"/output.txt" |
tail run.log |
534 |
|
echo successful 1>&2 |
535 |
|
# === Reduce the size of the testing emails! |
536 |
|
# if test "x$ADM" = x ; then |
537 |
|
# cp output.txt $CDIR"/output.txt" |
538 |
|
# else |
539 |
|
# cp output_adm.txt $CDIR"/output_adm.txt" |
540 |
|
# fi |
541 |
|
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
542 |
return 0 |
return 0 |
543 |
else |
else |
544 |
|
tail run.log |
545 |
|
echo failed 1>&2 |
546 |
|
cp run.log $CDIR"/run.log" |
547 |
|
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
548 |
return 1 |
return 1 |
549 |
fi |
fi |
550 |
) |
) |
554 |
{ |
{ |
555 |
# create codelet for comparing model output |
# create codelet for comparing model output |
556 |
|
|
557 |
echo -n "creating the comparison code... " |
printf "creating the comparison code... " |
558 |
cat > tmp_cmpnum.f <<EOFA |
cat > tmp_cmpnum.c <<EOF |
559 |
program cmpnum |
#include <stdio.h> |
560 |
implicit none |
#include <math.h> |
561 |
real*8 a,b,diff |
int main( int argc, char** argv ) { |
562 |
integer linnum,best |
int linnum,best,lncnt; |
563 |
best=-16 |
double a,b,abave,relerr; |
564 |
99 read(*,*,end=70,err=60) linnum,a,b |
best = -22; |
565 |
diff=0.5*(abs(a)+abs(b)) |
lncnt = 0; |
566 |
c print *,a,b,diff,abs(a-b)/diff |
while( 1 & (lncnt+=1) < 999 ) { |
567 |
if (diff.gt.1.e-12) then |
scanf("%d", &linnum); |
568 |
diff=abs(a-b)/diff |
if (linnum == -1) break; |
569 |
if (diff.gt.0.) then |
scanf("%lf", &a); scanf("%lf", &b); |
570 |
c print *,int(log10(diff)),diff |
abave = 0.5*(fabs(a)+fabs(b)); |
571 |
linnum=int(log10(diff)) |
if (abave > 0.0) { |
572 |
best=max(best,linnum) |
relerr=fabs(a-b)/abave; |
573 |
endif |
if (relerr > 0.0) { linnum = (int)rint(log10(relerr)); } |
574 |
else |
else { linnum = -16 ; } |
575 |
if (best.eq.-16.and.diff.ne.0.) best=-22 |
best = (best > linnum) ? best : linnum; |
576 |
endif |
} |
577 |
goto 99 |
} |
578 |
60 stop 'cmpnum: An error occured reading a,b' |
if (lncnt == 999) best=-29; |
579 |
70 print *,-best |
printf("%d\n", -best); |
580 |
end |
return 0; |
581 |
EOFA |
} |
582 |
|
EOF |
583 |
|
$CC -o tmp_cmpnum tmp_cmpnum.c -lm |
584 |
|
|
585 |
f77 tmp_cmpnum.f |
if [ -x ./tmp_cmpnum ]; then |
|
if [ -x ./a.out ]; then |
|
586 |
echo "OK" |
echo "OK" |
587 |
return 0 |
return 0 |
588 |
else |
else |
589 |
echo |
echo |
590 |
echo "createcodelet: failed to compile codelet" |
echo "ERROR: failed to compile comparison code -- please specify" |
591 |
|
echo " a C compiler using the CC environment variable." |
592 |
exit 1 |
exit 1 |
593 |
fi |
fi |
594 |
} |
} |
637 |
|
|
638 |
scandirs() |
scandirs() |
639 |
{ |
{ |
640 |
if [ $# -eq 0 ]; then |
if [ $# -eq 1 ]; then |
641 |
for arg in * ; do |
for arg in * ; do |
642 |
test -d $arg/input && echo $arg |
test -d $arg/$1 && echo $arg |
643 |
done |
done |
644 |
else |
else |
645 |
echo $* |
echo $* |
646 |
fi |
fi |
647 |
} |
} |
648 |
|
|
649 |
|
|
650 |
############################################################################### |
############################################################################### |
|
############################################################################### |
|
|
############################################################################### |
|
651 |
|
|
652 |
|
|
653 |
# Default properties |
# Default properties |
657 |
expts='' |
expts='' |
658 |
# ieee=1 |
# ieee=1 |
659 |
|
|
660 |
IEEE= |
IEEE=true |
661 |
if test "x$MITGCM_IEEE" != x ; then |
if test "x$MITGCM_IEEE" != x ; then |
662 |
IEEE=$MITGCM_IEEE |
IEEE=$MITGCM_IEEE |
663 |
fi |
fi |
668 |
NOGENMAKE=f |
NOGENMAKE=f |
669 |
NOCLEAN=f |
NOCLEAN=f |
670 |
NODEPEND=f |
NODEPEND=f |
671 |
|
POSTCLEAN=f |
672 |
|
|
673 |
BASH= |
BASH= |
674 |
OPTFILE=NONE |
OPTFILE=NONE |
675 |
ADDRESSES= |
ADDRESSES= |
676 |
TESTDIRS= |
TESTDIRS= |
677 |
MPACKDIR="../tools/mpack-1.6" |
MPACKDIR="../tools/mpack-1.6" |
678 |
|
HAVE_MPACK= |
679 |
MPACK="$MPACKDIR/mpack" |
MPACK="$MPACKDIR/mpack" |
680 |
COMMAND="make output.txt" |
COMMAND= |
681 |
MAKE=make |
if test "x$MAKE" = x ; then |
682 |
|
MAKE=make |
683 |
|
fi |
684 |
|
if test "x$CC" = x ; then |
685 |
|
CC=cc |
686 |
|
fi |
687 |
|
JOBS= |
688 |
MPI=f |
MPI=f |
689 |
|
OUTDIR= |
690 |
|
DELDIR= |
691 |
|
|
692 |
|
ADM= |
693 |
|
|
694 |
|
# Additional monitor types |
695 |
|
PTRACERS_NUM="1 2 3 4 5" |
696 |
|
|
697 |
echo -n "parsing options... " |
printf "parsing options... " |
698 |
|
|
699 |
ac_prev= |
ac_prev= |
700 |
for ac_option ; do |
for ac_option ; do |
743 |
-make=* | --make=*) |
-make=* | --make=*) |
744 |
MAKE=$ac_optarg ;; |
MAKE=$ac_optarg ;; |
745 |
|
|
746 |
|
-odir | --odir) |
747 |
|
ac_prev=OUTDIR ;; |
748 |
|
-odir=* | --odir=*) |
749 |
|
OUTDIR=$ac_optarg ;; |
750 |
|
|
751 |
|
-ptracers | --ptracers | -ptr | --ptr) |
752 |
|
ac_prev=PTRACERS_NUM ;; |
753 |
|
-ptracers=* | --ptracers=* | -ptr=* | --ptr=*) |
754 |
|
PTRACERS_NUM=$ac_optarg ;; |
755 |
|
|
756 |
|
-j) ac_prev=JOBS ;; |
757 |
|
-j=*) JOBS=$ac_optarg ;; |
758 |
|
|
759 |
-clean | --clean) |
-clean | --clean) |
760 |
CLEANUP=t ;; |
CLEANUP=t ; DELDIR=t ;; |
761 |
|
|
762 |
-quick | --quick | -q | --q) |
-quick | --quick | -q | --q) |
763 |
QUICK=t ;; |
QUICK=t ;; |
768 |
-nodepend | --nodepend | -nd | --nd) |
-nodepend | --nodepend | -nd | --nd) |
769 |
NODEPEND=t ;; |
NODEPEND=t ;; |
770 |
|
|
771 |
-mpi) MPI=true ;; |
-postclean | --postclean | -pc | --pc) |
772 |
|
POSTCLEAN=t ;; |
773 |
|
|
774 |
|
-mpi) MPI=t ;; |
775 |
|
|
776 |
|
-adm | -ad) ADM=t ;; |
777 |
|
|
778 |
-ieee) IEEE=true ;; |
-ieee) IEEE=true ;; |
779 |
-noieee) IEEE= ;; |
-noieee) IEEE= ;; |
782 |
-debug) debug=1 ;; |
-debug) debug=1 ;; |
783 |
-quiet) verbose=0 ;; |
-quiet) verbose=0 ;; |
784 |
|
|
785 |
|
-deldir | -dd) DELDIR=t ;; |
786 |
|
|
787 |
-*) |
-*) |
788 |
echo "Error: unrecognized option: "$ac_option |
echo "Error: unrecognized option: "$ac_option |
789 |
usage |
usage |
805 |
fi |
fi |
806 |
|
|
807 |
if test "x$TESTDIRS" = x ; then |
if test "x$TESTDIRS" = x ; then |
808 |
TESTDIRS=`scandirs` |
if test "x$ADM" = xt ; then |
809 |
|
TESTDIRS=`scandirs results_ad` |
810 |
|
else |
811 |
|
TESTDIRS=`scandirs results` |
812 |
|
fi |
813 |
fi |
fi |
814 |
|
|
815 |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
816 |
OPTFILE=$MITGCM_OF |
OPTFILE=$MITGCM_OF |
817 |
fi |
fi |
818 |
|
|
819 |
echo "OK" |
if test "x$ADM" = xt ; then |
820 |
|
EXECUTABLE="mitgcmuv_ad" |
821 |
|
OUTPUTFILE="output_adm.txt" |
822 |
|
else |
823 |
|
EXECUTABLE="mitgcmuv" |
824 |
|
OUTPUTFILE="output.txt" |
825 |
|
fi |
826 |
|
|
827 |
|
if test "x$ADM" = xt -a "x$COMMAND" = x ; then |
828 |
|
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
829 |
|
fi |
830 |
|
|
831 |
|
if test "x$COMMAND" = x ; then |
832 |
|
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
833 |
|
fi |
834 |
|
|
835 |
|
#echo "OK" |
836 |
|
echo "OK (COMMAND= $COMMAND )" |
837 |
|
|
838 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
839 |
createcodelet |
createcodelet |
840 |
|
|
841 |
# build the mpack utility |
# build the mpack utility |
842 |
build_mpack |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
843 |
|
echo "skipping mpack build" |
844 |
|
else |
845 |
|
build_mpack |
846 |
|
fi |
847 |
|
|
848 |
# Create a uniquely named directory to store results |
# Create a uniquely named directory to store results |
849 |
MACH=`hostname` |
MACH=`hostname` |
850 |
UNAMEA=`uname -a` |
UNAMEA=`uname -a` |
851 |
DATE=`date +%Y%m%d` |
DATE=`date +%Y%m%d` |
852 |
BASE=$MACH"_"$DATE"_" |
BASE="tr_"$MACH"_"$DATE"_" |
853 |
|
if test "x$OUTDIR" != x ; then |
854 |
|
BASE="tr_"$OUTDIR"_"$DATE"_" |
855 |
|
fi |
856 |
DNUM=0 |
DNUM=0 |
857 |
DRESULTS="$BASE$DNUM" |
DRESULTS="$BASE$DNUM" |
858 |
while test -e $DRESULTS ; do |
while test -e $DRESULTS ; do |
862 |
mkdir $DRESULTS |
mkdir $DRESULTS |
863 |
RETVAL=$? |
RETVAL=$? |
864 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
865 |
echo "Error: can't create results directory \"./$DRESULTS\"" |
echo "ERROR: Can't create results directory \"./$DRESULTS\"" |
866 |
exit 1 |
exit 1 |
867 |
fi |
fi |
868 |
SUMMARY="$DRESULTS/summary.txt" |
SUMMARY="$DRESULTS/summary.txt" |
869 |
echo -n "Start time: " >> $SUMMARY |
printf "Start time: " >> $SUMMARY |
870 |
date > $SUMMARY |
start_date=`date` |
871 |
date > dfile |
echo $start_date > $SUMMARY |
|
cat << EOF >> $SUMMARY |
|
|
T S U V |
|
|
G D M c m s m s m s m s |
|
|
E p a R g m m e . m m e . m m e . m m e . |
|
|
N n k u 2 i a a d i a a d i a a d i a a d |
|
|
2 d e n d n x n . n x n . n x n . n x n . |
|
|
|
|
|
EOF |
|
|
|
|
|
NDIR=0 |
|
872 |
|
|
873 |
of_path= |
of_path= |
874 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
882 |
fi |
fi |
883 |
file=${OPTFILE##*/} |
file=${OPTFILE##*/} |
884 |
OPTFILE=$of_path/$file |
OPTFILE=$of_path/$file |
885 |
|
cp $OPTFILE $DRESULTS |
886 |
|
echo >> $SUMMARY |
887 |
|
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
888 |
else |
else |
889 |
echo |
echo | tee $SUMMARY |
890 |
echo "WARNING: can't read OPTFILE=\"$OPTFILE\" but will try to use it..." |
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY |
891 |
|
exit 1 |
892 |
fi |
fi |
893 |
|
else |
894 |
|
echo >> $SUMMARY |
895 |
|
echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY |
896 |
|
echo " so the genmake default will be used." >> $SUMMARY |
897 |
fi |
fi |
898 |
echo |
echo |
|
echo "OPTFILE=$OPTFILE" >> $SUMMARY |
|
899 |
echo >> $SUMMARY |
echo >> $SUMMARY |
900 |
|
if test "x$ADM" = x ; then |
901 |
|
line_0=" ----T----- ----S----- ----U----- ----V-----" |
902 |
|
line_1="G D M c m s m s m s m s" |
903 |
|
line_2="E p a R g m m e . m m e . m m e . m m e ." |
904 |
|
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
905 |
|
line_4="2 d e n d n x n . n x n . n x n . n x n ." |
906 |
|
for ii in $PTRACERS_NUM ; do |
907 |
|
# tst=`eval 'echo $HAVE_PTR0'$ii` |
908 |
|
# if test "x$tst" = xt ; then |
909 |
|
line_0="$line_0 --PTR 0"$ii"--" |
910 |
|
line_1="$line_1 m s" |
911 |
|
line_2="$line_2 m m e ." |
912 |
|
line_3="$line_3 i a a d" |
913 |
|
line_4="$line_4 n x n ." |
914 |
|
# fi |
915 |
|
done |
916 |
|
echo "$line_0" | tee -a $SUMMARY |
917 |
|
echo "$line_1" | tee -a $SUMMARY |
918 |
|
echo "$line_2" | tee -a $SUMMARY |
919 |
|
echo "$line_3" | tee -a $SUMMARY |
920 |
|
echo "$line_4" | tee -a $SUMMARY |
921 |
|
echo " " | tee -a $SUMMARY |
922 |
|
else |
923 |
|
echo "ADJOINT=true" >> $SUMMARY |
924 |
|
echo >> $SUMMARY |
925 |
|
cat << EOF | tee -a $SUMMARY |
926 |
|
G D M C G |
927 |
|
E p a R o r |
928 |
|
N n k u s a |
929 |
|
2 d e n t d |
930 |
|
|
931 |
|
EOF |
932 |
|
fi |
933 |
|
|
934 |
# ...and each test directory... |
# ...and each test directory... |
935 |
for dir in $TESTDIRS ; do |
for dir in $TESTDIRS ; do |
942 |
if test -r $dir/input/Makefile ; then |
if test -r $dir/input/Makefile ; then |
943 |
( cd $dir/input ; make CLEAN ) |
( cd $dir/input ; make CLEAN ) |
944 |
fi |
fi |
945 |
|
( |
946 |
|
cd $dir |
947 |
|
rm -rf tr_run.* |
948 |
|
) |
949 |
continue |
continue |
950 |
fi |
fi |
951 |
|
|
952 |
# Verify that the testdir exists and contains previous |
# Verify that the testdir exists and contains previous |
953 |
# results in the correct location--or skip this directory! |
# results in the correct location--or skip this directory! |
954 |
if test ! -r $dir"/results/output.txt" ; then |
fout= |
955 |
echo "can't read \"$dir/results/output.txt\" -- skipping $dir" |
if test "x$ADM" = x ; then |
956 |
|
fout=$dir"/results/output.txt" |
957 |
|
else |
958 |
|
fout=$dir"/results_ad/output_adm.txt" |
959 |
|
fi |
960 |
|
if test ! -r $fout ; then |
961 |
|
echo "can't read \"$fout\" -- skipping $dir" |
962 |
continue |
continue |
963 |
fi |
fi |
964 |
|
if test "x$ADM" = x ; then |
965 |
|
check_for_add_mon_output $fout |
966 |
|
fi |
967 |
|
|
968 |
echo "-------------------------------------------------------------------------------" |
# Check for additional types of monitor output |
|
echo |
|
|
echo "Experiment: $dir" |
|
|
echo |
|
|
unset genmake makedepend make run |
|
|
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
|
969 |
|
|
970 |
builddir="input" |
builddir="input" |
971 |
rundir="input" |
rundir="input" |
977 |
linkdata $use_seperate_build $dir/$rundir |
linkdata $use_seperate_build $dir/$rundir |
978 |
fi |
fi |
979 |
|
|
980 |
CODE_DIR=$dir/code |
# Check whether there are "extra runs" for this testdir |
981 |
BUILD_DIR=$dir/$builddir |
extra_runs= |
982 |
MPI_FILES="CPP_EEOPTIONS.h_mpi SIZE.h_mpi" |
if test "x$ADM" = x -a "x$use_seperate_build" = x1 ; then |
983 |
NOMPI_FILES="CPP_EEOPTIONS.h_nompi SIZE.h_nompi" |
ex_run_dirs=`( cd $dir ; echo input.* )` |
984 |
|
echo "ex_run_dirs='$ex_run_dirs'" |
985 |
|
for exd in $ex_run_dirs ; do |
986 |
|
name=`echo $exd | sed -e 's/input.//g'` |
987 |
|
outf="$dir/results/output.txt.$name" |
988 |
|
if test -f $outf -a -r $outf ; then |
989 |
|
extra_runs="$extra_runs $name" |
990 |
|
fi |
991 |
|
done |
992 |
|
fi |
993 |
|
|
994 |
# Is this an MPI run? |
if test "x$ADM" = x ; then |
995 |
if test "x$MPI" = xt ; then |
code_dir=code |
996 |
FILES=$MPI_FILES |
CODE_DIR=$dir/code |
|
endings="_mpi" |
|
997 |
else |
else |
998 |
FILES=$NOMPI_FILES |
code_dir=code_ad |
999 |
endings="_nompi" |
CODE_DIR=$dir/code_ad |
1000 |
fi |
fi |
1001 |
|
BUILD_DIR=$dir/$builddir |
1002 |
# Check to see that we have the files |
|
1003 |
have_files=t |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
1004 |
for i in $FILES ; do |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
|
if test ! -r $CODE_DIR/$i ; then |
|
|
echo "Warning: can't read file $CODE_DIR/$i" |
|
|
have_files=f |
|
|
fi |
|
|
done |
|
|
if test "x$have_files" != xt -a "x$MPI" = xt ; then |
|
|
echo "Skipping $dir due to lack of input files (see above warning)" |
|
1005 |
continue |
continue |
1006 |
fi |
fi |
1007 |
|
|
1008 |
# If we have the $FILES and they differ, copy the $FILES to $BUILD_DIR |
echo "-------------------------------------------------------------------------------" |
1009 |
if test "x$have_files" = xt ; then |
echo |
1010 |
for i in $FILES ; do |
echo "Experiment: $dir" |
1011 |
sstr="s|$endings||" |
echo |
1012 |
name=`echo $i | sed -e $sstr ` |
unset genmake makedepend make run |
1013 |
cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
1014 |
RETVAL=$? |
|
|
if test "x$RETVAL" != x0 ; then |
|
|
cp $CODE_DIR/$i $BUILD_DIR/$name |
|
|
fi |
|
|
done |
|
|
fi |
|
|
|
|
1015 |
# Create an output dir for each OPTFILE/tdir combination |
# Create an output dir for each OPTFILE/tdir combination |
1016 |
CDIR=$DRESULTS"/"$DRESULTS"_"$NDIR |
rel_CDIR=$DRESULTS"/"$dir |
1017 |
mkdir $CDIR |
mkdir $rel_CDIR |
1018 |
CDIR=`pwd`"/$CDIR" |
CDIR=`pwd`"/$rel_CDIR" |
1019 |
|
|
1020 |
if test "x$CLEANUP" = xt ; then |
if test "x$CLEANUP" = xt ; then |
1021 |
makeclean $dir/$builddir |
makeclean $dir/$builddir |
1022 |
else |
else |
1023 |
genmakemodel $dir/$builddir && genmake=Y \ |
genmakemodel $dir/$builddir && genmake=Y \ |
1024 |
&& makeclean $dir/$builddir \ |
&& makeclean $dir/$builddir \ |
1025 |
|
&& symlink_mpifiles $dir $code_dir $builddir \ |
1026 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
1027 |
&& makemodel $dir/$builddir && make=Y \ |
&& makemodel $dir/$builddir && make=Y \ |
1028 |
&& linkdata $use_seperate_build $dir/$rundir \ |
&& linkdata $use_seperate_build $dir/$rundir \ |
1031 |
fi |
fi |
1032 |
|
|
1033 |
echo |
echo |
1034 |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} \ |
if test "x$ADM" = x ; then |
1035 |
${run:-N} $results |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1036 |
echo |
echo |
1037 |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} \ |
echo "$fres" >> $SUMMARY |
1038 |
${run:-N} $results >> $SUMMARY |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
1039 |
echo "fresults='" > $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1040 |
formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} \ |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1041 |
${run:-N} $results >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1042 |
echo "'" >> $CDIR"/summary.txt" |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1043 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
|
1044 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
for ex in $extra_runs ; do |
1045 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
unset run |
1046 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
1047 |
|
# Create an output dir for each OPTFILE/tdir.ex combination |
1048 |
( |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
1049 |
cd $DRESULTS |
mkdir $rel_CDIR |
1050 |
tar -cf $NDIR".tar" $DRESULTS"_"$NDIR > /dev/null 2>&1 |
CDIR=`pwd`"/$rel_CDIR" |
1051 |
gzip $NDIR".tar" |
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
1052 |
) |
for ldir in input.$ex input ; do |
1053 |
|
( |
1054 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
cd "$dir/$ldir" > /dev/null 2>&1 |
1055 |
echo "No mail sent" |
ls -1 2>/dev/null \ |
1056 |
|
| sed -e 's|^CVS$||g' | sed -e 's|^output.txt$||g' |
1057 |
|
) > tr_exrun_links |
1058 |
|
( |
1059 |
|
cd "$dir/tr_run.$ex" |
1060 |
|
cat ../../tr_exrun_links | while read i ; do |
1061 |
|
if test ! "x$i" = x ; then |
1062 |
|
test ! -r $i && ln -s "../"$ldir"/"$i $i |
1063 |
|
fi |
1064 |
|
done |
1065 |
|
) |
1066 |
|
test -e tr_exrun_links && rm -f tr_exrun_links |
1067 |
|
done |
1068 |
|
ldir=build |
1069 |
|
( |
1070 |
|
cd $dir/tr_run.$ex |
1071 |
|
test ! -e mitgcmuv && ln -s "../"$ldir"/"mitgcmuv . |
1072 |
|
) |
1073 |
|
runmodel $dir/tr_run.$ex && run=Y \ |
1074 |
|
&& results=`testoutput $dir tr_run.$ex "."$ex` |
1075 |
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
1076 |
|
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1077 |
|
fres="$fres.$ex" |
1078 |
|
echo |
1079 |
|
echo "$fres" >> $SUMMARY |
1080 |
|
echo "fresults='$fres'" > $CDIR"/summary.txt" |
1081 |
|
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1082 |
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1083 |
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1084 |
|
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
1085 |
|
done |
1086 |
else |
else |
1087 |
$MPACK -s MITgcm-test -m 1000000 $DRESULTS"/"$NDIR".tar.gz" $ADDRESSES |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
1088 |
RETVAL=$? |
fres=$fres"$results $dir" |
1089 |
if test "x$RETVAL" != x0 ; then |
echo |
1090 |
echo "Warning: \"$MPACK\" failed -- please contact <edhill@mitgcm.org>" |
echo "$fres" >> $SUMMARY |
1091 |
else |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
1092 |
rm -f $DRESULTS"/"$NDIR".tar*" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1093 |
fi |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1094 |
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1095 |
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1096 |
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
1097 |
|
>> $CDIR"/summary.txt" |
1098 |
fi |
fi |
1099 |
|
|
1100 |
echo "-------------------------------------------------------------------------------" |
postclean $dir/$builddir |
1101 |
|
|
1102 |
NDIR=$(( $NDIR + 1 )) |
echo "-------------------------------------------------------------------------------" |
1103 |
|
|
1104 |
done |
done |
1105 |
|
|
1106 |
echo -n "Start time: " >> $SUMMARY |
printf "Start time: " >> $SUMMARY |
1107 |
date -r dfile >> $SUMMARY |
echo $start_date >> $SUMMARY |
1108 |
echo -n "End time: " >> $SUMMARY |
printf "End time: " >> $SUMMARY |
1109 |
date >> $SUMMARY |
date >> $SUMMARY |
1110 |
|
|
1111 |
rm tmp_cmpnum.f a.out dfile |
# If addresses were supplied and mpack built successfully, then try |
1112 |
|
# to send email using mpack. |
1113 |
|
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
1114 |
|
echo "No results email was sent." |
1115 |
|
else |
1116 |
|
if test "x$HAVE_MPACK" = xt ; then |
1117 |
|
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
1118 |
|
&& gzip $DRESULTS".tar" \ |
1119 |
|
&& $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES |
1120 |
|
RETVAL=$? |
1121 |
|
if test "x$RETVAL" != x0 ; then |
1122 |
|
echo |
1123 |
|
echo "Warning: The tar, gzip, & mpack step failed. Please send email" |
1124 |
|
echo " to <MITgcm-support@mitgcm.org> for help. You may copy the " |
1125 |
|
echo " summary of results from the directory \"$DRESULTS\"." |
1126 |
|
echo |
1127 |
|
else |
1128 |
|
echo |
1129 |
|
echo "An email containing results was sent to the following addresses:" |
1130 |
|
echo " \"$ADDRESSES\"" |
1131 |
|
echo |
1132 |
|
fi |
1133 |
|
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
1134 |
|
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
1135 |
|
fi |
1136 |
|
fi |
1137 |
|
|
1138 |
|
# rm -f tmp_cmpnum.f a.out |
1139 |
|
rm -f tmp_cmpnum.c tmp_cmpnum |
1140 |
|
|
1141 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
1142 |
cat $SUMMARY |
cat $SUMMARY | sed 's/ -- -- -- --//g' |
1143 |
|
if test -e tr_out.txt ; then |
1144 |
|
mv tr_out.txt tr_out.txt.old |
1145 |
|
fi |
1146 |
|
cat $SUMMARY | sed 's/ -- -- -- --//g' > tr_out.txt |
1147 |
|
fi |
1148 |
|
|
1149 |
|
if test "x$DELDIR" = xt ; then |
1150 |
|
rm -rf $DRESULTS |
1151 |
fi |
fi |
1152 |
|
|