1 |
#! /usr/bin/env bash |
2 |
# |
3 |
# $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.42 2004/07/08 15:47:19 jmc Exp $ |
4 |
# $Name: $ |
5 |
# |
6 |
|
7 |
usage() |
8 |
{ |
9 |
echo |
10 |
echo "Usage: $0 [OPTIONS]" |
11 |
echo |
12 |
echo "where possible OPTIONS are:" |
13 |
echo " (-help|-h) print usage" |
14 |
echo " (-mpi) use MPI input files" |
15 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
16 |
echo " (DEF=\"-ieee\")" |
17 |
echo " (-optfile=|-of=)STRING list of optfiles to use" |
18 |
echo " (-a|-addr) STRING list of email recipients" |
19 |
echo " (DEF=\"edhill@mitgcm.org\")" |
20 |
echo " (-t|-tdir) STRING list of test dirs to use" |
21 |
echo " (DEF=\"\" which builds all)" |
22 |
echo " (-b|-bash) STRING preferred location of a \"bash\" or" |
23 |
echo " Bourne-compatible \"sh\" shell" |
24 |
echo " (DEF=\"\" for \"bash\")" |
25 |
echo " (-adm|-ad) perform an adjoint run" |
26 |
echo " (-command) STRING command to run" |
27 |
echo " (DEF=\"make output.txt\")" |
28 |
echo " (-m|-make) STRING command to use for \"make\"" |
29 |
echo " (DEF=\"make\")" |
30 |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
31 |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
32 |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
33 |
echo " (-nogenmake|-ng) skip the genmake stage" |
34 |
echo " (-noclean|-nc) skip the \"make clean\" stage" |
35 |
echo " (-nodepend|-nd) skip the \"make depend\" stage" |
36 |
echo " (-deldir|-dd) on success, delete the output directory" |
37 |
echo |
38 |
echo "and where STRING follows a whitespace-delimited format" |
39 |
echo "such as:" |
40 |
echo " -t 'exp0 exp2 exp3' " |
41 |
echo " -addr='abc@123.com testing@home.org'" |
42 |
echo |
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exit 1 |
44 |
} |
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|
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# build the mpack utility |
47 |
build_mpack() |
48 |
{ |
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printf "building the mpack utility... " |
50 |
if test ! -x "$MPACKDIR/mpack" ; then |
51 |
if test ! -d $MPACKDIR ; then |
52 |
echo |
53 |
echo "Error: can't find \"$MPACKDIR\"" |
54 |
echo " are you sure this program is being run in the correct " |
55 |
echo " (that is, \"MITGCM_ROOT\verification\") directory?" |
56 |
echo |
57 |
HAVE_MPACK=f |
58 |
fi |
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printf "building mpack... " |
60 |
if test "x$CC" = x ; then |
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export CC=cc |
62 |
fi |
63 |
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
64 |
RETVAL=$? |
65 |
if test "x$RETVAL" != x0 ; then |
66 |
echo |
67 |
echo "Error building the mpack tools at: $MPACK_DIR" |
68 |
echo |
69 |
HAVE_MPACK=f |
70 |
else |
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rm -f tr_build_mpack.out |
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HAVE_MPACK=t |
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fi |
74 |
else |
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HAVE_MPACK=t |
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fi |
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echo "OK" |
78 |
} |
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|
80 |
testoutput_for_prop() |
81 |
{ |
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# testoutput_for_prop dir s1 label subdir extension |
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# |
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# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
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# using search strings s1 and text label |
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|
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
89 |
fi |
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if [ -r $1/$4/output.txt ]; then |
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grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt |
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lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
93 |
if [ $lncnt -lt 3 ]; then |
94 |
if [ $verbose -gt 0 ]; then |
95 |
echo Not enough lines of output when searching for "$2" 1>&2 |
96 |
fi |
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return 99 |
98 |
fi |
99 |
else |
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echo testoutput_for_prop: output.txt from model run was not readable 1>&2 |
101 |
return 99 |
102 |
fi |
103 |
if [ $debug -gt 0 ]; then |
104 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2 |
105 |
fi |
106 |
grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt |
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lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
108 |
if [ $lncnt -lt 3 ]; then |
109 |
if [ $verbose -gt 0 ]; then |
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echo Not enough lines of output when searching for "$2" 1>&2 |
111 |
fi |
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return 99 |
113 |
fi |
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
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fi |
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join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
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if [ $debug -gt 0 ]; then |
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echo testoutput_for_prop: compare_lines 1>&2 |
120 |
fi |
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if [ $verbose -gt 1 ]; then |
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cat tmp3.txt 1>&2 |
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fi |
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echo "-1" >> tmp3.txt |
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# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
126 |
cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
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digits_of_similarity=`./tmp_cmpnum < tmp4.txt` |
128 |
if [ $digits_of_similarity -eq 99 ]; then |
129 |
if [ $verbose -gt 0 ]; then |
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echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
131 |
fi |
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digits_of_similarity=99 |
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else |
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if [ $verbose -gt 0 ]; then |
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echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
136 |
fi |
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fi |
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rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
139 |
|
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return $digits_of_similarity |
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} |
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|
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dashnum() |
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{ |
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# dashnum n1 n2 n3 ... |
146 |
# |
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# print numbers using %3i format or "--" if number = 99 |
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|
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for num in $@ ; do |
150 |
if [ $num = 99 ]; then |
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printf ' --' |
152 |
else |
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printf '%3i' $num |
154 |
fi |
155 |
done |
156 |
} |
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|
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testoutput_ad() |
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{ |
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grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt |
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grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt |
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grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt |
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grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt |
164 |
join t05.txt t15.txt > t5.txt |
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join t06.txt t16.txt > t6.txt |
166 |
echo "-1" >> t5.txt |
167 |
echo "-1" >> t6.txt |
168 |
digits_5=`./tmp_cmpnum < t5.txt` |
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digits_6=`./tmp_cmpnum < t6.txt` |
170 |
dashnum $digits_5 $digits_6 |
171 |
rm -f t[01][56].txt t[56].txt |
172 |
} |
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|
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testoutput() |
175 |
{ |
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# testoutput directory subdir extension |
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# |
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# test output in "directory" |
179 |
if test "x$ADM" = x ; then |
180 |
if [ $debug -gt 0 ]; then |
181 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
182 |
fi |
183 |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$? |
184 |
if [ $debug -gt 0 ]; then |
185 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
186 |
fi |
187 |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$? |
188 |
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$? |
189 |
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$? |
190 |
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$? |
191 |
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$? |
192 |
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$? |
193 |
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$? |
194 |
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$? |
195 |
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$? |
196 |
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$? |
197 |
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$? |
198 |
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$? |
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testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$? |
200 |
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$? |
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testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$? |
202 |
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$? |
203 |
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
204 |
$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
205 |
else |
206 |
testoutput_ad $1 $2 "precision_grdchk_result" |
207 |
fi |
208 |
} |
209 |
|
210 |
genmakemodel() |
211 |
{ |
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# genmakemodel directory |
213 |
if test "x$NOGENMAKE" = xt ; then |
214 |
echo "genmake skipped!" |
215 |
else |
216 |
if test "x$BASH" = x ; then |
217 |
GENMAKE2="../../../tools/genmake2" |
218 |
else |
219 |
GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH" |
220 |
fi |
221 |
( |
222 |
cd $1; |
223 |
command="$GENMAKE2 -ds -m $MAKE" |
224 |
if test "x$ADM" = x ; then |
225 |
command="$command --mods=../code" |
226 |
else |
227 |
command="$command --mods=../code_ad" |
228 |
command="$command -adof=../../../tools/adjoint_options/adjoint_staf" |
229 |
fi |
230 |
if test "x$OPTFILE" != xNONE ; then |
231 |
command="$command --optfile=$OPTFILE" |
232 |
fi |
233 |
if test "x$IEEE" != x ; then |
234 |
command="$command -ieee" |
235 |
fi |
236 |
printf 'genmake ... ' 1>&2 |
237 |
$command > make.log 2>&1 |
238 |
RETVAL=$? |
239 |
cp Makefile $CDIR |
240 |
if test "x$RETVAL" != x0 ; then |
241 |
tail make.log |
242 |
echo "genmakemodel: genmake failed" 1>&2 |
243 |
cp genmake_* make.log $CDIR |
244 |
return 1 |
245 |
else |
246 |
echo "successful" 1>&2 |
247 |
fi |
248 |
) |
249 |
fi |
250 |
} |
251 |
|
252 |
makeclean() |
253 |
{ |
254 |
# makeclean directory |
255 |
if test "x$NOCLEAN" = xt ; then |
256 |
echo "make CLEAN skipped!" |
257 |
else |
258 |
( |
259 |
cd $1; |
260 |
if test -e output.txt ; then |
261 |
rm -f output.txt |
262 |
fi |
263 |
printf 'make CLEAN ... ' 2>&1 |
264 |
if test -r Makefile ; then |
265 |
$MAKE CLEAN >> make.log 2>&1 |
266 |
RETVAL=$? |
267 |
if test "x$RETVAL" != x0 ; then |
268 |
tail make.log |
269 |
echo "makeclean: \"make CLEAN\" failed" 1>&2 |
270 |
cp make.log $CDIR"/make.log" |
271 |
return 1 |
272 |
fi |
273 |
fi |
274 |
echo successful 1>&2 |
275 |
exit 0 |
276 |
) |
277 |
fi |
278 |
} |
279 |
|
280 |
makedependmodel() |
281 |
{ |
282 |
# makedependmodel directory |
283 |
if test "x$NODEPEND" = xt ; then |
284 |
echo "make depend skipped!" |
285 |
else |
286 |
( |
287 |
cd $1; |
288 |
printf 'make depend ... ' 1>&2 |
289 |
$MAKE depend >> make.log 2>&1 |
290 |
RETVAL=$? |
291 |
if test "x$RETVAL" != x0 ; then |
292 |
tail make.log |
293 |
echo "makedependmodel: make depend failed" 1>&2 |
294 |
cp make.log $CDIR"/make.log" |
295 |
return 1 |
296 |
else |
297 |
echo successful 1>&2 |
298 |
fi |
299 |
) |
300 |
fi |
301 |
} |
302 |
|
303 |
makemodel() |
304 |
{ |
305 |
# makemodel directory |
306 |
( |
307 |
cd $1; |
308 |
if test -r Makefile ; then |
309 |
printf 'make ... ' 1>&2 |
310 |
if test "x$ADM" = x ; then |
311 |
if test "x$JOBS" = x ; then |
312 |
$MAKE >> make.log 2>&1 |
313 |
else |
314 |
$MAKE -j $JOBS >> make.log 2>&1 |
315 |
fi |
316 |
else |
317 |
$MAKE adall >> make.log 2>&1 |
318 |
fi |
319 |
RETVAL=$? |
320 |
if test "x$RETVAL" != x0 ; then |
321 |
tail make.log |
322 |
echo failed 1>&2 |
323 |
cp make.log $CDIR"/make.log" |
324 |
return 1 |
325 |
else |
326 |
echo successful 1>&2 |
327 |
fi |
328 |
fi |
329 |
) |
330 |
} |
331 |
|
332 |
symlink_mpifiles() |
333 |
{ |
334 |
# Put special links so that MPI specific files are used |
335 |
# This MUST be invoked between makeclean and makelinks because |
336 |
# the Makefile will link to non-mpi files by default |
337 |
|
338 |
dir=$1 |
339 |
code_dir=$2 |
340 |
BUILD_DIR=$dir/$3 |
341 |
CODE_DIR=$dir/$code_dir |
342 |
|
343 |
# These are files that should replace their counter-part when using -mpi |
344 |
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
345 |
|
346 |
# Is this an MPI run? |
347 |
if test "x$MPI" = xt ; then |
348 |
# YES: We symbolically link these files to the build |
349 |
# dir so long as there is no real file in place |
350 |
for ii in $MPI_FILES ; do |
351 |
i=`echo $ii | sed 's:^\./::'` |
352 |
name=`echo $i | sed 's:_mpi::' ` |
353 |
cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1 |
354 |
RETVAL=$? |
355 |
if test "x$RETVAL" != x0 ; then |
356 |
if ! test -f $BUILD_DIR/$i ; then |
357 |
#echo Linking $name to $i |
358 |
(cd $BUILD_DIR; ln -sf ../$code_dir/$i $name) |
359 |
fi |
360 |
fi |
361 |
done |
362 |
else |
363 |
# NO: We undo any _mpi symbolically linked files |
364 |
for ii in $MPI_FILES ; do |
365 |
i=`echo $ii | sed 's:^\./::'` |
366 |
name=`echo $i | sed 's:_mpi::' ` |
367 |
if test -L $BUILD_DIR/$name ; then |
368 |
linktarg=`(cd $BUILD_DIR; readlink $name)` |
369 |
if test $linktarg = "../$code_dir/$name"_mpi ; then |
370 |
#echo Un-linking $name from $linktarg |
371 |
rm -f $BUILD_DIR/$name |
372 |
fi |
373 |
fi |
374 |
done |
375 |
fi |
376 |
|
377 |
} |
378 |
|
379 |
linkdata() |
380 |
{ |
381 |
# linkdata flag |
382 |
# |
383 |
# symbolically link data files to run directory |
384 |
if test "x$1" = x1 ; then |
385 |
( |
386 |
cd $2 |
387 |
if test "x$ADM" = x ; then |
388 |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
389 |
for i in $files ; do |
390 |
if test ! -d "../input/"$i ; then |
391 |
ln -sf "../input/"$i $i |
392 |
fi |
393 |
done |
394 |
else |
395 |
files=`( cd ../input ; ls -1 *.bin | grep -v CVS )` |
396 |
for i in $files ; do |
397 |
if test ! -d "../input/"$i ; then |
398 |
ln -sf "../input/"$i $i |
399 |
fi |
400 |
done |
401 |
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
402 |
for i in $files ; do |
403 |
if test ! -d "../input_ad/"$i ; then |
404 |
ln -sf "../input_ad/"$i $i |
405 |
fi |
406 |
done |
407 |
fi |
408 |
) |
409 |
fi |
410 |
} |
411 |
|
412 |
runmodel() |
413 |
{ |
414 |
# runmodel directory |
415 |
# |
416 |
# runs "$COMMAND in "directory" |
417 |
# (where "$COMMAND" is relative to "directory") |
418 |
( |
419 |
cd $1 |
420 |
printf 'runmodel ... ' 1>&2 |
421 |
# make output.txt |
422 |
echo |
423 |
# echo "COMMAND='$COMMAND'" |
424 |
# echo "pwd='"`pwd`"'" |
425 |
( eval $COMMAND ) >> run.log 2>&1 |
426 |
RETVAL=$? |
427 |
if test "x$RETVAL" = x0 ; then |
428 |
echo successful 1>&2 |
429 |
if test "x$ADM" = x ; then |
430 |
cp output.txt $CDIR"/output.txt" |
431 |
else |
432 |
cp output.txt_adm $CDIR"/output.txt_adm" |
433 |
fi |
434 |
return 0 |
435 |
else |
436 |
tail run.log |
437 |
echo failed 1>&2 |
438 |
cp run.log $CDIR"/run.log" |
439 |
return 1 |
440 |
fi |
441 |
) |
442 |
} |
443 |
|
444 |
createcodelet() |
445 |
{ |
446 |
# create codelet for comparing model output |
447 |
|
448 |
printf "creating the comparison code... " |
449 |
cat > tmp_cmpnum.c <<EOF |
450 |
#include <stdio.h> |
451 |
#include <math.h> |
452 |
int main( int argc, char** argv ) { |
453 |
int linnum,best,lncnt; |
454 |
double a,b,diff; |
455 |
best = -16; |
456 |
lncnt = 0; |
457 |
while( 1 & (lncnt+=1) < 999 ) { |
458 |
scanf("%d", &linnum); |
459 |
if (linnum == -1) break; |
460 |
scanf("%lf", &a); scanf("%lf", &b); |
461 |
diff = 0.5*(fabs(a)+fabs(b)); |
462 |
if (diff > 1.e-12) { |
463 |
diff=fabs(a-b)/diff; |
464 |
if (diff > 0.0) { |
465 |
linnum = (int)log10(diff); |
466 |
best = (best > linnum) ? best : linnum; |
467 |
} |
468 |
else { |
469 |
if (best == -16 && diff != 0) best = -22; |
470 |
} |
471 |
} |
472 |
} |
473 |
if (lncnt == 999) best=-29; |
474 |
printf("%d\n", -best); |
475 |
return 0; |
476 |
} |
477 |
EOF |
478 |
cc -o tmp_cmpnum tmp_cmpnum.c -lm |
479 |
|
480 |
if [ -x ./tmp_cmpnum ]; then |
481 |
echo "OK" |
482 |
return 0 |
483 |
else |
484 |
echo |
485 |
echo "ERROR: failed to compile comparison code" |
486 |
exit 1 |
487 |
fi |
488 |
} |
489 |
|
490 |
formatresults() |
491 |
{ |
492 |
# formatresults expt genmake depend make run results* |
493 |
|
494 |
nm=$1 |
495 |
printf '%s %s %s %s' $2 $3 $4 $5 |
496 |
shift; shift; shift; shift; shift; |
497 |
printf '%3s' $@ |
498 |
|
499 |
if [ $1 = '--' ]; then |
500 |
printf ' N/O ' |
501 |
else |
502 |
if [ $1 -gt 12 ]; then |
503 |
printf ' pass' |
504 |
else |
505 |
printf ' FAIL' |
506 |
fi |
507 |
fi |
508 |
printf ' %s' $nm |
509 |
printf '\n' |
510 |
|
511 |
} |
512 |
|
513 |
show_help() |
514 |
{ |
515 |
cat - << EOF |
516 |
$0 [-help] [-quick] [-verbose] dir1 [dir2] [...] |
517 |
|
518 |
-help|-h Show this help message |
519 |
-quiet Reduce the amount of output |
520 |
-verbose Produce copious amounts of output |
521 |
-debug Produce even more output which will mean nothing to most |
522 |
-force Do "make CLEAN" before compiling. This forces a complete rebuild. |
523 |
-clean Do "make CLEAN" after compiling and testing. |
524 |
-cleanup Aggresively removes all model output, executables and object files |
525 |
and then exits. Use with care. |
526 |
|
527 |
Normal usage: |
528 |
$0 * Configure, compile, run and analyze in all experiment directories |
529 |
EOF |
530 |
} |
531 |
|
532 |
scandirs() |
533 |
{ |
534 |
if [ $# -eq 0 ]; then |
535 |
for arg in * ; do |
536 |
test -d $arg/input && echo $arg |
537 |
done |
538 |
else |
539 |
echo $* |
540 |
fi |
541 |
} |
542 |
|
543 |
|
544 |
############################################################################### |
545 |
|
546 |
|
547 |
# Default properties |
548 |
debug=0 |
549 |
verbose=1 |
550 |
clean=0 |
551 |
expts='' |
552 |
# ieee=1 |
553 |
|
554 |
IEEE=true |
555 |
if test "x$MITGCM_IEEE" != x ; then |
556 |
IEEE=$MITGCM_IEEE |
557 |
fi |
558 |
|
559 |
|
560 |
CLEANUP=f |
561 |
QUICK=f |
562 |
NOGENMAKE=f |
563 |
NOCLEAN=f |
564 |
NODEPEND=f |
565 |
|
566 |
BASH= |
567 |
OPTFILE=NONE |
568 |
ADDRESSES= |
569 |
TESTDIRS= |
570 |
MPACKDIR="../tools/mpack-1.6" |
571 |
HAVE_MPACK= |
572 |
MPACK="$MPACKDIR/mpack" |
573 |
COMMAND= |
574 |
MAKE=make |
575 |
JOBS= |
576 |
MPI=f |
577 |
DELDIR= |
578 |
|
579 |
ADM= |
580 |
|
581 |
printf "parsing options... " |
582 |
|
583 |
ac_prev= |
584 |
for ac_option ; do |
585 |
|
586 |
# If the previous option needs an argument, assign it. |
587 |
if test -n "$ac_prev"; then |
588 |
eval "$ac_prev=\$ac_option" |
589 |
ac_prev= |
590 |
continue |
591 |
fi |
592 |
|
593 |
ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'` |
594 |
|
595 |
case $ac_option in |
596 |
|
597 |
-help | --help | -h | --h) |
598 |
usage ;; |
599 |
|
600 |
-optfile | --optfile | -of | --of) |
601 |
ac_prev=OPTFILE ;; |
602 |
-optfile=* | --optfile=* | -of=* | --of=*) |
603 |
OPTFILE=$ac_optarg ;; |
604 |
|
605 |
-addr | --addr | -a | --a) |
606 |
ac_prev=ADDRESSES ;; |
607 |
-addr=* | --addr=*) |
608 |
ADDRESSES=$ac_optarg ;; |
609 |
|
610 |
-tdir | --tdir | -t | --t) |
611 |
ac_prev=TESTDIRS ;; |
612 |
-tdir=* | --tdir=*) |
613 |
TESTDIRS=$ac_optarg ;; |
614 |
|
615 |
-bash | --bash | -b | --b) |
616 |
ac_prev=BASH ;; |
617 |
-bash=* | --bash=*) |
618 |
BASH=$ac_optarg ;; |
619 |
|
620 |
-command | --command | -c | --c) |
621 |
ac_prev=COMMAND ;; |
622 |
-command=* | --command=*) |
623 |
COMMAND=$ac_optarg ;; |
624 |
|
625 |
-make | --make | -m | --m) |
626 |
ac_prev=MAKE ;; |
627 |
-make=* | --make=*) |
628 |
MAKE=$ac_optarg ;; |
629 |
|
630 |
-j) ac_prev=JOBS ;; |
631 |
-j=*) JOBS=$ac_optarg ;; |
632 |
|
633 |
-clean | --clean) |
634 |
CLEANUP=t ;; |
635 |
|
636 |
-quick | --quick | -q | --q) |
637 |
QUICK=t ;; |
638 |
-nogenmake | --nogenmake | -ng | --ng) |
639 |
NOGENMAKE=t ;; |
640 |
-noclean | --noclean | -nc | --nc) |
641 |
NOCLEAN=t ;; |
642 |
-nodepend | --nodepend | -nd | --nd) |
643 |
NODEPEND=t ;; |
644 |
|
645 |
-mpi) MPI=t ;; |
646 |
|
647 |
-adm | -ad) ADM=t ;; |
648 |
|
649 |
-ieee) IEEE=true ;; |
650 |
-noieee) IEEE= ;; |
651 |
|
652 |
-verbose) verbose=2 ;; |
653 |
-debug) debug=1 ;; |
654 |
-quiet) verbose=0 ;; |
655 |
|
656 |
-deldir | -dd) DELDIR=t ;; |
657 |
|
658 |
-*) |
659 |
echo "Error: unrecognized option: "$ac_option |
660 |
usage |
661 |
;; |
662 |
|
663 |
*) |
664 |
echo "Error: unrecognized argument: "$ac_option |
665 |
usage |
666 |
;; |
667 |
|
668 |
esac |
669 |
|
670 |
done |
671 |
|
672 |
if test "x$QUICK" = xt ; then |
673 |
NOGENMAKE=t |
674 |
NOCLEAN=t |
675 |
NODEPEND=t |
676 |
fi |
677 |
|
678 |
if test "x$TESTDIRS" = x ; then |
679 |
TESTDIRS=`scandirs` |
680 |
fi |
681 |
|
682 |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
683 |
OPTFILE=$MITGCM_OF |
684 |
fi |
685 |
|
686 |
if test "x$ADM" = xt -a "x$COMMAND" = x ; then |
687 |
COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1" |
688 |
fi |
689 |
|
690 |
if test "x$COMMAND" = x ; then |
691 |
COMMAND="make output.txt" |
692 |
fi |
693 |
|
694 |
echo "OK" |
695 |
|
696 |
# create the FORTRAN comparison code |
697 |
createcodelet |
698 |
|
699 |
# build the mpack utility |
700 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
701 |
echo "skipping mpack build" |
702 |
else |
703 |
build_mpack |
704 |
fi |
705 |
|
706 |
# Create a uniquely named directory to store results |
707 |
MACH=`hostname` |
708 |
UNAMEA=`uname -a` |
709 |
DATE=`date +%Y%m%d` |
710 |
BASE="tr_"$MACH"_"$DATE"_" |
711 |
DNUM=0 |
712 |
DRESULTS="$BASE$DNUM" |
713 |
while test -e $DRESULTS ; do |
714 |
DNUM=$(( $DNUM + 1 )) |
715 |
DRESULTS="$BASE$DNUM" |
716 |
done |
717 |
mkdir $DRESULTS |
718 |
RETVAL=$? |
719 |
if test "x$RETVAL" != x0 ; then |
720 |
echo "ERROR: Can't create results directory \"./$DRESULTS\"" |
721 |
exit 1 |
722 |
fi |
723 |
SUMMARY="$DRESULTS/summary.txt" |
724 |
printf "Start time: " >> $SUMMARY |
725 |
start_date=`date` |
726 |
echo $start_date > $SUMMARY |
727 |
|
728 |
of_path= |
729 |
if test "x$OPTFILE" != xNONE ; then |
730 |
if test -r $OPTFILE ; then |
731 |
# get the path |
732 |
path=${OPTFILE%/*} |
733 |
if test "x$path" = x ; then |
734 |
of_path=`pwd` |
735 |
else |
736 |
of_path=`( cd $path > /dev/null 2>&1 ; pwd )` |
737 |
fi |
738 |
file=${OPTFILE##*/} |
739 |
OPTFILE=$of_path/$file |
740 |
cp $OPTFILE $DRESULTS |
741 |
echo >> $SUMMARY |
742 |
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
743 |
else |
744 |
echo | tee $SUMMARY |
745 |
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY |
746 |
exit 1 |
747 |
fi |
748 |
else |
749 |
echo >> $SUMMARY |
750 |
echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY |
751 |
echo " so the genmake default will be used." >> $SUMMARY |
752 |
fi |
753 |
echo |
754 |
echo >> $SUMMARY |
755 |
if test "x$ADM" = x ; then |
756 |
cat << EOF | tee -a $SUMMARY |
757 |
T S U V |
758 |
G D M c m s m s m s m s |
759 |
E p a R g m m e . m m e . m m e . m m e . |
760 |
N n k u 2 i a a d i a a d i a a d i a a d |
761 |
2 d e n d n x n . n x n . n x n . n x n . |
762 |
|
763 |
EOF |
764 |
else |
765 |
echo "ADJOINT=true" >> $SUMMARY |
766 |
echo >> $SUMMARY |
767 |
cat << EOF | tee -a $SUMMARY |
768 |
G D M C G |
769 |
E p a R o r |
770 |
N n k u s a |
771 |
2 d e n t d |
772 |
|
773 |
EOF |
774 |
fi |
775 |
|
776 |
# ...and each test directory... |
777 |
for dir in $TESTDIRS ; do |
778 |
|
779 |
# Cleanup only! |
780 |
if test "x$CLEANUP" = xt ; then |
781 |
if test -r $dir/build/Makefile ; then |
782 |
( cd $dir/build ; make CLEAN ) |
783 |
fi |
784 |
if test -r $dir/input/Makefile ; then |
785 |
( cd $dir/input ; make CLEAN ) |
786 |
fi |
787 |
continue |
788 |
fi |
789 |
|
790 |
# Verify that the testdir exists and contains previous |
791 |
# results in the correct location--or skip this directory! |
792 |
fout= |
793 |
if test "x$ADM" = x ; then |
794 |
fout=$dir"/results/output.txt" |
795 |
else |
796 |
fout=$dir"/results_ad/output.txt_adm" |
797 |
fi |
798 |
if test ! -r $fout ; then |
799 |
echo "can't read \"$fout\" -- skipping $dir" |
800 |
continue |
801 |
fi |
802 |
|
803 |
builddir="input" |
804 |
rundir="input" |
805 |
use_seperate_build=0 |
806 |
if test -d $dir/build -a -r $dir/build ; then |
807 |
builddir="build" |
808 |
rundir="build" |
809 |
use_seperate_build=1 |
810 |
linkdata $use_seperate_build $dir/$rundir |
811 |
fi |
812 |
|
813 |
# Check whether there are "extra runs" for this testdir |
814 |
extra_runs= |
815 |
if test "x$ADM" = x -a "x$use_seperate_build" = x1 ; then |
816 |
ex_run_dirs=`( cd $dir ; echo input.* )` |
817 |
echo "ex_run_dirs='$ex_run_dirs'" |
818 |
for exd in $ex_run_dirs ; do |
819 |
name=`echo $exd | sed -e 's/input.//g'` |
820 |
outf="$dir/results/output.txt.$name" |
821 |
if test -f $outf -a -r $outf ; then |
822 |
extra_runs="$extra_runs $name" |
823 |
fi |
824 |
done |
825 |
fi |
826 |
|
827 |
if test "x$ADM" = x ; then |
828 |
code_dir=code |
829 |
CODE_DIR=$dir/code |
830 |
else |
831 |
code_dir=code_ad |
832 |
CODE_DIR=$dir/code_ad |
833 |
fi |
834 |
BUILD_DIR=$dir/$builddir |
835 |
|
836 |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
837 |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
838 |
continue |
839 |
fi |
840 |
|
841 |
echo "-------------------------------------------------------------------------------" |
842 |
echo |
843 |
echo "Experiment: $dir" |
844 |
echo |
845 |
unset genmake makedepend make run |
846 |
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
847 |
|
848 |
# Create an output dir for each OPTFILE/tdir combination |
849 |
rel_CDIR=$DRESULTS"/"$dir |
850 |
mkdir $rel_CDIR |
851 |
CDIR=`pwd`"/$rel_CDIR" |
852 |
|
853 |
if test "x$CLEANUP" = xt ; then |
854 |
makeclean $dir/$builddir |
855 |
else |
856 |
genmakemodel $dir/$builddir && genmake=Y \ |
857 |
&& makeclean $dir/$builddir \ |
858 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
859 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
860 |
&& makemodel $dir/$builddir && make=Y \ |
861 |
&& linkdata $use_seperate_build $dir/$rundir \ |
862 |
&& runmodel $dir/$rundir && run=Y \ |
863 |
&& results=`testoutput $dir $rundir` |
864 |
fi |
865 |
|
866 |
echo |
867 |
if test "x$ADM" = x ; then |
868 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
869 |
echo |
870 |
echo "$fres" >> $SUMMARY |
871 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
872 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
873 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
874 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
875 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
876 |
|
877 |
OLD_COMMAND=$COMMAND |
878 |
COMMAND="./mitgcmuv > output.txt" |
879 |
for ex in $extra_runs ; do |
880 |
test -e "$dir/tr_run.$ex" && rm -rf "$dir/tr_run.$ex" |
881 |
mkdir "$dir/tr_run.$ex" |
882 |
links=`( cd "$dir/input" > /dev/null 2>&1 ; ls -1 | grep -v CVS )` |
883 |
( |
884 |
cd "$dir/tr_run.$ex" |
885 |
for i in $links; do |
886 |
ln -s ../input/$i $i |
887 |
done |
888 |
) |
889 |
links=`( cd "$dir/input.$ex" > /dev/null 2>&1 ; ls -1 | grep -v CVS )` |
890 |
( |
891 |
cd "$dir/tr_run.$ex" |
892 |
for i in $links; do |
893 |
test -e $i && rm -f $i |
894 |
ln -s ../input.$ex/$i $i |
895 |
done |
896 |
ln -s ../$builddir/mitgcmuv mitgcmuv |
897 |
) |
898 |
runmodel $dir/tr_run.$ex && run=Y \ |
899 |
&& results=`testoutput $dir tr_run.$ex "."$ex` |
900 |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
901 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
902 |
fres="$fres.$ex" |
903 |
echo |
904 |
echo "$fres" >> $SUMMARY |
905 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
906 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
907 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
908 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
909 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
910 |
done |
911 |
COMMAND=$OLD_COMMAND |
912 |
else |
913 |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
914 |
fres=$fres"$results $dir" |
915 |
echo |
916 |
echo "$fres" >> $SUMMARY |
917 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
918 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
919 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
920 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
921 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
922 |
fi |
923 |
|
924 |
echo "-------------------------------------------------------------------------------" |
925 |
|
926 |
done |
927 |
|
928 |
printf "Start time: " >> $SUMMARY |
929 |
echo $start_date >> $SUMMARY |
930 |
printf "End time: " >> $SUMMARY |
931 |
date >> $SUMMARY |
932 |
|
933 |
# If addresses were supplied and mpack built successfully, then try |
934 |
# to send email using mpack. |
935 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
936 |
echo "No results email was sent." |
937 |
else |
938 |
if test "x$HAVE_MPACK" = xt ; then |
939 |
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
940 |
&& gzip $DRESULTS".tar" \ |
941 |
&& $MPACK -s MITgcm-test -m 1500000 $DRESULTS".tar.gz" $ADDRESSES |
942 |
RETVAL=$? |
943 |
if test "x$RETVAL" != x0 ; then |
944 |
echo |
945 |
echo "Warning: The tar, gzip, & mpack step failed. Please send email" |
946 |
echo " to <MITgcm-support@mitgcm.org> for help. You may copy the " |
947 |
echo " summary of results from the directory \"$DRESULTS\"." |
948 |
echo |
949 |
else |
950 |
echo |
951 |
echo "An email containing results was sent to the following addresses:" |
952 |
echo " \"$ADDRESSES\"" |
953 |
echo |
954 |
fi |
955 |
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
956 |
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
957 |
fi |
958 |
fi |
959 |
|
960 |
# rm -f tmp_cmpnum.f a.out |
961 |
rm -f tmp_cmpnum.c tmp_cmpnum |
962 |
|
963 |
if test "x$CLEANUP" != xt ; then |
964 |
cat $SUMMARY |
965 |
if test -e tr_out.txt ; then |
966 |
mv tr_out.txt tr_out.txt.old |
967 |
fi |
968 |
cat $SUMMARY > tr_out.txt |
969 |
fi |
970 |
|
971 |
if test "x$DELDIR" = xt ; then |
972 |
rm -rf $DRESULTS |
973 |
fi |