22 |
echo " (-b|-bash) STRING preferred location of a \"bash\" or" |
echo " (-b|-bash) STRING preferred location of a \"bash\" or" |
23 |
echo " Bourne-compatible \"sh\" shell" |
echo " Bourne-compatible \"sh\" shell" |
24 |
echo " (DEF=\"\" for \"bash\")" |
echo " (DEF=\"\" for \"bash\")" |
25 |
|
echo " (-adm|-ad) perform an adjoint run" |
26 |
echo " (-command) STRING command to run" |
echo " (-command) STRING command to run" |
27 |
echo " (DEF=\"make output.txt\")" |
echo " (DEF=\"make output.txt\")" |
28 |
echo " (-m|-make) STRING command to use for \"make\"" |
echo " (-m|-make) STRING command to use for \"make\"" |
55 |
HAVE_MPACK=f |
HAVE_MPACK=f |
56 |
fi |
fi |
57 |
echo -n "building mpack... " |
echo -n "building mpack... " |
58 |
( cd $MPACKDIR && ./configure && $MAKE ) > build_mpack.out 2>&1 |
if test "x$CC" = x ; then |
59 |
|
export CC=cc |
60 |
|
fi |
61 |
|
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
62 |
RETVAL=$? |
RETVAL=$? |
63 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
64 |
echo |
echo |
66 |
echo |
echo |
67 |
HAVE_MPACK=f |
HAVE_MPACK=f |
68 |
else |
else |
69 |
|
rm -f tr_build_mpack.out |
70 |
HAVE_MPACK=t |
HAVE_MPACK=t |
71 |
fi |
fi |
72 |
else |
else |
75 |
echo "OK" |
echo "OK" |
76 |
} |
} |
77 |
|
|
|
compare_lines() |
|
|
{ |
|
|
# use codelet to compare lines |
|
|
if [ $verbose -gt 1 ]; then |
|
|
cat tmp3.txt 1>&2 |
|
|
fi |
|
|
return `./a.out < tmp3.txt` |
|
|
} |
|
|
|
|
78 |
testoutput_for_prop() |
testoutput_for_prop() |
79 |
{ |
{ |
80 |
# testoutput_for_prop dir s1 label subdir |
# testoutput_for_prop dir s1 label subdir |
116 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
117 |
echo testoutput_for_prop: compare_lines 1>&2 |
echo testoutput_for_prop: compare_lines 1>&2 |
118 |
fi |
fi |
119 |
compare_lines |
if [ $verbose -gt 1 ]; then |
120 |
digits_of_similarity=$? |
cat tmp3.txt 1>&2 |
121 |
|
fi |
122 |
|
echo "-1" >> tmp3.txt |
123 |
|
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
124 |
|
cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
125 |
|
digits_of_similarity=`./tmp_cmpnum < tmp4.txt` |
126 |
if [ $digits_of_similarity -eq 99 ]; then |
if [ $digits_of_similarity -eq 99 ]; then |
127 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
128 |
echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
133 |
echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
134 |
fi |
fi |
135 |
fi |
fi |
136 |
rm tmp1.txt tmp2.txt tmp3.txt |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
137 |
|
|
138 |
return $digits_of_similarity |
return $digits_of_similarity |
139 |
} |
} |
153 |
done |
done |
154 |
} |
} |
155 |
|
|
156 |
|
testoutput_ad() |
157 |
|
{ |
158 |
|
grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt |
159 |
|
grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt |
160 |
|
grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt |
161 |
|
grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt |
162 |
|
join t05.txt t15.txt > t5.txt |
163 |
|
join t06.txt t16.txt > t6.txt |
164 |
|
echo "-1" >> t5.txt |
165 |
|
echo "-1" >> t6.txt |
166 |
|
digits_5=`./tmp_cmpnum < t5.txt` |
167 |
|
digits_6=`./tmp_cmpnum < t6.txt` |
168 |
|
dashnum $digits_5 $digits_6 |
169 |
|
rm -f t[01][56].txt t[56].txt |
170 |
|
} |
171 |
|
|
172 |
testoutput() |
testoutput() |
173 |
{ |
{ |
174 |
# testoutput diretory subdir |
# testoutput directory subdir |
175 |
# |
# |
176 |
# test output in "directory" |
# test output in "directory" |
177 |
|
if test "x$ADM" = x ; then |
178 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
179 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
180 |
fi |
fi |
181 |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$? |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$? |
182 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
183 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
echo testoutput: cg2dres=$cg2dres 1>&2 |
184 |
|
fi |
185 |
|
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
186 |
|
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
187 |
|
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$? |
188 |
|
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$? |
189 |
|
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
190 |
|
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
191 |
|
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$? |
192 |
|
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$? |
193 |
|
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
194 |
|
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
195 |
|
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$? |
196 |
|
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$? |
197 |
|
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
198 |
|
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
199 |
|
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$? |
200 |
|
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$? |
201 |
|
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
202 |
|
$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
203 |
|
else |
204 |
|
testoutput_ad $1 $2 "precision_grdchk_result" |
205 |
fi |
fi |
|
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$? |
|
|
testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$? |
|
|
testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$? |
|
|
testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$? |
|
|
testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$? |
|
|
testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$? |
|
|
testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$? |
|
|
|
|
|
dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \ |
|
|
$umin $umax $umean $usd $vmin $vmax $vmean $vsd |
|
206 |
} |
} |
207 |
|
|
208 |
genmakemodel() |
genmakemodel() |
214 |
GENMAKE2="$BASH ../../../tools/genmake2" |
GENMAKE2="$BASH ../../../tools/genmake2" |
215 |
( |
( |
216 |
cd $1; |
cd $1; |
217 |
command="$GENMAKE2 -ds -m $MAKE --mods=../code" |
command="$GENMAKE2 -ds -m $MAKE" |
218 |
|
if test "x$ADM" = x ; then |
219 |
|
command="$command --mods=../code" |
220 |
|
else |
221 |
|
command="$command --mods=../code_ad" |
222 |
|
command="$command -adof=../../../tools/adjoint_options/adjoint_staf" |
223 |
|
fi |
224 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
225 |
command="$command --optfile=$OPTFILE" |
command="$command --optfile=$OPTFILE" |
226 |
fi |
fi |
301 |
cd $1; |
cd $1; |
302 |
if test -r Makefile ; then |
if test -r Makefile ; then |
303 |
printf 'make ... ' 1>&2 |
printf 'make ... ' 1>&2 |
304 |
$MAKE >> make.log 2>&1 |
if test "x$ADM" = x ; then |
305 |
|
$MAKE >> make.log 2>&1 |
306 |
|
else |
307 |
|
$MAKE adall >> make.log 2>&1 |
308 |
|
fi |
309 |
RETVAL=$? |
RETVAL=$? |
310 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
311 |
tail make.log |
tail make.log |
327 |
if test "x$1" = x1 ; then |
if test "x$1" = x1 ; then |
328 |
( |
( |
329 |
cd $2 |
cd $2 |
330 |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
if test "x$ADM" = x ; then |
331 |
for i in $files ; do |
files=`( cd ../input ; ls -1 | grep -v CVS )` |
332 |
if test ! -d "../input/"$i ; then |
for i in $files ; do |
333 |
ln -sf "../input/"$i $i |
if test ! -d "../input/"$i ; then |
334 |
fi |
ln -sf "../input/"$i $i |
335 |
done |
fi |
336 |
|
done |
337 |
|
else |
338 |
|
files=`( cd ../input ; ls -1 *.bin | grep -v CVS )` |
339 |
|
for i in $files ; do |
340 |
|
if test ! -d "../input/"$i ; then |
341 |
|
ln -sf "../input/"$i $i |
342 |
|
fi |
343 |
|
done |
344 |
|
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
345 |
|
for i in $files ; do |
346 |
|
if test ! -d "../input_ad/"$i ; then |
347 |
|
ln -sf "../input_ad/"$i $i |
348 |
|
fi |
349 |
|
done |
350 |
|
fi |
351 |
) |
) |
352 |
fi |
fi |
353 |
} |
} |
356 |
{ |
{ |
357 |
# runmodel directory |
# runmodel directory |
358 |
# |
# |
359 |
# runs "$COMMAND" in "directory" |
# runs "$COMMAND in "directory" |
360 |
# (where "$COMMAND" is relative to "directory") |
# (where "$COMMAND" is relative to "directory") |
361 |
( |
( |
362 |
cd $1 |
cd $1 |
366 |
RETVAL=$? |
RETVAL=$? |
367 |
if test "x$RETVAL" = x0 ; then |
if test "x$RETVAL" = x0 ; then |
368 |
echo successful 1>&2 |
echo successful 1>&2 |
369 |
cp output.txt $CDIR"/output.txt" |
if test "x$ADM" = x ; then |
370 |
|
cp output.txt $CDIR"/output.txt" |
371 |
|
else |
372 |
|
cp output.txt_adm $CDIR"/output.txt_adm" |
373 |
|
fi |
374 |
return 0 |
return 0 |
375 |
else |
else |
376 |
tail run.log |
tail run.log |
386 |
# create codelet for comparing model output |
# create codelet for comparing model output |
387 |
|
|
388 |
echo -n "creating the comparison code... " |
echo -n "creating the comparison code... " |
389 |
cat > tmp_cmpnum.f <<EOFA |
cat > tmp_cmpnum.c <<EOF |
390 |
program cmpnum |
#include <stdio.h> |
391 |
implicit none |
#include <math.h> |
392 |
real*8 a,b,diff |
int main( int argc, char** argv ) { |
393 |
integer linnum,best |
int linnum,best; |
394 |
best=-16 |
double a,b,diff; |
395 |
99 read(*,*,end=70,err=60) linnum,a,b |
best = -16; |
396 |
diff=0.5*(abs(a)+abs(b)) |
while( 1 ) { |
397 |
c print *,a,b,diff,abs(a-b)/diff |
scanf("%d", &linnum); |
398 |
if (diff.gt.1.e-12) then |
if (linnum == -1) break; |
399 |
diff=abs(a-b)/diff |
scanf("%lf", &a); scanf("%lf", &b); |
400 |
if (diff.gt.0.) then |
diff = 0.5*(fabs(a)+fabs(b)); |
401 |
c print *,int(log10(diff)),diff |
if (diff > 1.e-12) { |
402 |
linnum=int(log10(diff)) |
diff=fabs(a-b)/diff; |
403 |
best=max(best,linnum) |
if (diff > 0.0) { |
404 |
endif |
linnum = (int)log10(diff); |
405 |
else |
best = (best > linnum) ? best : linnum; |
406 |
if (best.eq.-16.and.diff.ne.0.) best=-22 |
} |
407 |
endif |
else { |
408 |
goto 99 |
if (best == -16 && diff != 0) best = -22; |
409 |
60 stop 'cmpnum: An error occured reading a,b' |
} |
410 |
70 print *,-best |
} |
411 |
end |
} |
412 |
EOFA |
printf("%d\n", -best); |
413 |
|
return 0; |
414 |
|
} |
415 |
|
EOF |
416 |
|
cc -o tmp_cmpnum tmp_cmpnum.c -lm |
417 |
|
|
418 |
f77 -o a.out tmp_cmpnum.f |
if [ -x ./tmp_cmpnum ]; then |
|
if [ -x ./a.out ]; then |
|
419 |
echo "OK" |
echo "OK" |
420 |
return 0 |
return 0 |
421 |
else |
else |
508 |
MPACKDIR="../tools/mpack-1.6" |
MPACKDIR="../tools/mpack-1.6" |
509 |
HAVE_MPACK= |
HAVE_MPACK= |
510 |
MPACK="$MPACKDIR/mpack" |
MPACK="$MPACKDIR/mpack" |
511 |
COMMAND="make output.txt" |
COMMAND= |
512 |
MAKE=make |
MAKE=make |
513 |
MPI=f |
MPI=f |
514 |
|
|
515 |
|
ADM= |
516 |
|
|
517 |
echo -n "parsing options... " |
echo -n "parsing options... " |
518 |
|
|
519 |
ac_prev= |
ac_prev= |
577 |
|
|
578 |
-mpi) MPI=t ;; |
-mpi) MPI=t ;; |
579 |
|
|
580 |
|
-adm | -ad) ADM=t ;; |
581 |
|
|
582 |
-ieee) IEEE=true ;; |
-ieee) IEEE=true ;; |
583 |
-noieee) IEEE= ;; |
-noieee) IEEE= ;; |
584 |
|
|
614 |
OPTFILE=$MITGCM_OF |
OPTFILE=$MITGCM_OF |
615 |
fi |
fi |
616 |
|
|
617 |
|
if test "x$ADM" = xt -a "x$COMMAND" = x ; then |
618 |
|
COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1" |
619 |
|
fi |
620 |
|
|
621 |
|
if test "x$COMMAND" = x ; then |
622 |
|
COMMAND="make output.txt" |
623 |
|
fi |
624 |
|
|
625 |
echo "OK" |
echo "OK" |
626 |
|
|
627 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
634 |
MACH=`hostname` |
MACH=`hostname` |
635 |
UNAMEA=`uname -a` |
UNAMEA=`uname -a` |
636 |
DATE=`date +%Y%m%d` |
DATE=`date +%Y%m%d` |
637 |
BASE=$MACH"_"$DATE"_" |
BASE="tr_"$MACH"_"$DATE"_" |
638 |
DNUM=0 |
DNUM=0 |
639 |
DRESULTS="$BASE$DNUM" |
DRESULTS="$BASE$DNUM" |
640 |
while test -e $DRESULTS ; do |
while test -e $DRESULTS ; do |
679 |
fi |
fi |
680 |
echo |
echo |
681 |
echo >> $SUMMARY |
echo >> $SUMMARY |
682 |
cat << EOF | tee -a $SUMMARY |
if test "x$ADM" = x ; then |
683 |
|
cat << EOF | tee -a $SUMMARY |
684 |
T S U V |
T S U V |
685 |
G D M c m s m s m s m s |
G D M c m s m s m s m s |
686 |
E p a R g m m e . m m e . m m e . m m e . |
E p a R g m m e . m m e . m m e . m m e . |
688 |
2 d e n d n x n . n x n . n x n . n x n . |
2 d e n d n x n . n x n . n x n . n x n . |
689 |
|
|
690 |
EOF |
EOF |
691 |
|
else |
692 |
|
echo "ADJOINT=true" >> $SUMMARY |
693 |
|
echo >> $SUMMARY |
694 |
|
cat << EOF | tee -a $SUMMARY |
695 |
|
G D M C G |
696 |
|
E p a R o r |
697 |
|
N n k u s a |
698 |
|
2 d e n t d |
699 |
|
|
700 |
|
EOF |
701 |
|
fi |
702 |
|
|
703 |
# ...and each test directory... |
# ...and each test directory... |
704 |
for dir in $TESTDIRS ; do |
for dir in $TESTDIRS ; do |
716 |
|
|
717 |
# Verify that the testdir exists and contains previous |
# Verify that the testdir exists and contains previous |
718 |
# results in the correct location--or skip this directory! |
# results in the correct location--or skip this directory! |
719 |
if test ! -r $dir"/results/output.txt" ; then |
fout= |
720 |
echo "can't read \"$dir/results/output.txt\" -- skipping $dir" |
if test "x$ADM" = x ; then |
721 |
|
fout=$dir"/results/output.txt" |
722 |
|
else |
723 |
|
fout=$dir"/results_ad/output.txt_adm" |
724 |
|
fi |
725 |
|
if test ! -r $fout ; then |
726 |
|
echo "can't read \"$fout\" -- skipping $dir" |
727 |
continue |
continue |
728 |
fi |
fi |
729 |
|
|
744 |
linkdata $use_seperate_build $dir/$rundir |
linkdata $use_seperate_build $dir/$rundir |
745 |
fi |
fi |
746 |
|
|
747 |
CODE_DIR=$dir/code |
if test "x$ADM" = x ; then |
748 |
|
CODE_DIR=$dir/code |
749 |
|
else |
750 |
|
CODE_DIR=$dir/code_ad |
751 |
|
fi |
752 |
BUILD_DIR=$dir/$builddir |
BUILD_DIR=$dir/$builddir |
753 |
MPI_FILES="CPP_EEOPTIONS.h_mpi SIZE.h_mpi" |
MPI_FILES="CPP_EEOPTIONS.h_mpi SIZE.h_mpi" |
754 |
NOMPI_FILES="CPP_EEOPTIONS.h_nompi SIZE.h_nompi" |
NOMPI_FILES="CPP_EEOPTIONS.h_nompi SIZE.h_nompi" |
806 |
fi |
fi |
807 |
|
|
808 |
echo |
echo |
809 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
if test "x$ADM" = x ; then |
810 |
|
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
811 |
|
else |
812 |
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
813 |
|
fres=$fres"$results $dir" |
814 |
|
fi |
815 |
echo |
echo |
816 |
echo "$fres" >> $SUMMARY |
echo "$fres" >> $SUMMARY |
817 |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
echo "fresults='$fres'" > $CDIR"/summary.txt" |
856 |
fi |
fi |
857 |
fi |
fi |
858 |
|
|
859 |
rm tmp_cmpnum.f a.out |
# rm -f tmp_cmpnum.f a.out |
860 |
|
rm -f tmp_cmpnum.c tmp_cmpnum |
861 |
|
|
862 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
863 |
cat $SUMMARY |
cat $SUMMARY |
864 |
if test -e tr.out ; then |
if test -e tr_out.txt ; then |
865 |
mv tr.out tr.out.old |
mv tr_out.txt tr_out.txt.old |
866 |
fi |
fi |
867 |
cat $SUMMARY > tr.out |
cat $SUMMARY > tr_out.txt |
868 |
fi |
fi |
869 |
|
|