11 |
echo |
echo |
12 |
echo "where possible OPTIONS are:" |
echo "where possible OPTIONS are:" |
13 |
echo " (-help|-h) print usage" |
echo " (-help|-h) print usage" |
14 |
echo " (-mth) run multi threaded (using eedata.mth)" |
echo " (-mth) run multi-threaded (using eedata.mth)" |
15 |
echo " (-mpi) compile and run using MPI" |
echo " (-mpi) compile and run using MPI" |
16 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
17 |
echo " (DEF=\"-ieee\")" |
echo " (DEF=\"-ieee\")" |
18 |
|
echo " (-gsl) compile with \"-gsl\" flag" |
19 |
echo " (-of=|-optfile=)STRING list of optfiles to use" |
echo " (-of=|-optfile=)STRING list of optfiles to use" |
20 |
echo " (-a|-addr) STRING list of email recipients" |
echo " (-a|-addr) STRING list of email recipients" |
21 |
echo " (DEF=\"edhill@mitgcm.org\")" |
echo " (DEF=\"\" no email is sent)" |
22 |
|
echo " (-mpd|-mpackdir) DIR location of the mpack utility" |
23 |
|
echo " (DEF=\"../tools/mpack-1.6\")" |
24 |
echo " (-t|-tdir) STRING list of group and/or exp. dirs to test" |
echo " (-t|-tdir) STRING list of group and/or exp. dirs to test" |
25 |
echo " (recognized groups: basic, tutorials)" |
echo " (recognized groups: basic, tutorials)" |
26 |
echo " (DEF=\"\" which test all)" |
echo " (DEF=\"\" which test all)" |
30 |
echo " Bourne-compatible \"sh\" shell" |
echo " Bourne-compatible \"sh\" shell" |
31 |
echo " (DEF=\"\" for \"bash\")" |
echo " (DEF=\"\" for \"bash\")" |
32 |
echo " (-adm|-ad) perform an adjoint run" |
echo " (-adm|-ad) perform an adjoint run" |
33 |
|
echo " (-oad) perform an OpenAD adjoint run" |
34 |
echo " (-command) STRING command to run" |
echo " (-command) STRING command to run" |
35 |
echo " (DEF=\"make output.txt\")" |
echo " (DEF=\"make output.txt\")" |
36 |
echo " (-m|-make) STRING command to use for \"make\"" |
echo " (-m|-make) STRING command to use for \"make\"" |
68 |
build_mpack() |
build_mpack() |
69 |
{ |
{ |
70 |
printf "building the mpack utility... " |
printf "building the mpack utility... " |
71 |
if test ! -x "$MPACKDIR/mpack" ; then |
MPACK="$MPACKDIR/mpack" |
72 |
|
if test ! -x $MPACK ; then |
73 |
if test ! -d $MPACKDIR ; then |
if test ! -d $MPACKDIR ; then |
74 |
echo |
echo |
75 |
echo "Error: can't find \"$MPACKDIR\"" |
echo "Error: can't find \"$MPACKDIR\"" |
78 |
echo |
echo |
79 |
HAVE_MPACK=f |
HAVE_MPACK=f |
80 |
fi |
fi |
|
printf "building mpack... " |
|
81 |
if test "x$CC" = x ; then |
if test "x$CC" = x ; then |
82 |
export CC=cc |
export CC=cc |
83 |
fi |
fi |
84 |
|
printf "building mpack (using CC=$CC)... " |
85 |
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
86 |
RETVAL=$? |
RETVAL=$? |
87 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
92 |
else |
else |
93 |
rm -f tr_build_mpack.out |
rm -f tr_build_mpack.out |
94 |
HAVE_MPACK=t |
HAVE_MPACK=t |
95 |
|
echo "done" |
96 |
fi |
fi |
97 |
else |
else |
98 |
HAVE_MPACK=t |
HAVE_MPACK=t |
99 |
|
echo "already exist" |
100 |
fi |
fi |
|
echo "OK" |
|
101 |
} |
} |
102 |
|
|
103 |
testoutput_var() |
testoutput_var() |
114 |
if [ -r $1/$4/$OUTPUTFILE ]; then |
if [ -r $1/$4/$OUTPUTFILE ]; then |
115 |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
116 |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
117 |
if [ $lncntA -lt 3 ]; then |
if [ $lncntA -lt 2 ]; then |
118 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
119 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
120 |
fi |
fi |
129 |
fi |
fi |
130 |
grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
131 |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
132 |
if [ $lncntB -lt 3 ]; then |
if [ $lncntB -lt 2 ]; then |
133 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
134 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
135 |
fi |
fi |
180 |
return $digits_of_similarity |
return $digits_of_similarity |
181 |
} |
} |
182 |
|
|
|
dashnum() |
|
|
{ |
|
|
# dashnum n1 n2 n3 ... |
|
|
# |
|
|
# print numbers using %3i format or "--" if number = 99 |
|
|
|
|
|
for num in $@ ; do |
|
|
if [ $num = 99 ]; then |
|
|
printf ' --' |
|
|
else |
|
|
printf '%3i' $num |
|
|
fi |
|
|
done |
|
|
} |
|
|
|
|
|
testoutput_ad() |
|
|
{ |
|
|
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $5}' > t05.txt |
|
|
grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $5}' > t15.txt |
|
|
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $6}' > t06.txt |
|
|
grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $6}' > t16.txt |
|
|
join t05.txt t15.txt > t5.txt |
|
|
join t06.txt t16.txt > t6.txt |
|
|
echo "-1" >> t5.txt |
|
|
echo "-1" >> t6.txt |
|
|
digits_5=`./tr_cmpnum < t5.txt` |
|
|
digits_6=`./tr_cmpnum < t6.txt` |
|
|
dashnum $digits_5 $digits_6 |
|
|
rm -f t[01][56].txt t[56].txt |
|
|
} |
|
|
|
|
|
check_for_add_mon_output() |
|
|
{ |
|
|
# Check for additional types of monitor output |
|
|
if test "x$1" = x ; then |
|
|
return |
|
|
fi |
|
|
|
|
|
for ii in $PTRACERS_NUM ; do |
|
|
eval "HAVE_PTR0"$ii"=f" |
|
|
done |
|
|
|
|
|
ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
|
|
ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
|
|
for ii in $PTRACERS_NUM ; do |
|
|
for jj in $ptr_add ; do |
|
|
name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
|
|
tst=`grep $name $1 | wc -l | awk '{print $1}'` |
|
|
if test ! "x$tst" = x0 ; then |
|
|
eval "HAVE_PTR0"$ii"=t" |
|
|
fi |
|
|
done |
|
|
# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' |
|
|
done |
|
|
} |
|
|
|
|
183 |
testoutput_run() |
testoutput_run() |
184 |
{ |
{ |
185 |
# testoutput_run directory subdir reference_output |
# testoutput_run directory subdir reference_output |
186 |
# |
# |
187 |
# test output from 1 run in "directory" |
# test output from 1 run in "directory" |
188 |
if test "x$ADM" = x ; then |
# --> same processing for adjoint & forward test |
189 |
# default list of output variables to be checked: |
# default list of output variables to be checked: |
190 |
# 1rst : main variable used to decide if it pass or FAIL |
# 1rst : main variable used to decide if it pass or FAIL |
191 |
# others : number of matching digits to be printed in summary.txt |
# others : number of matching digits to be printed in summary.txt |
197 |
listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \ |
listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \ |
198 |
| sed 's/+//g' | sed "s/^$sVar//"` |
| sed 's/+//g' | sed "s/^$sVar//"` |
199 |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi |
200 |
for ii in 1 2 3 4 5 6 7 8 9 ; do |
# check for ptracer output in reference_output file : |
201 |
tst=`eval 'echo "$HAVE_PTR0'$ii'"'` |
outpref=$1/results/$3 |
202 |
#echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 |
ptr_mon="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
203 |
if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi |
ptr_mon="$ptr_mon trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
204 |
done |
for ii in $PTRACERS_NUM ; do |
205 |
tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'` |
ptrfound=0 |
206 |
|
for jj in $ptr_mon ; do |
207 |
|
name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
208 |
|
tst=`grep $name $outpref | wc -l | awk '{print $1}'` |
209 |
|
if test ! "x$tst" = x0 ; then ptrfound=1 ; fi |
210 |
|
done |
211 |
|
if test $ptrfound = '1' ; then |
212 |
|
eval "HAVE_PTR0"$ii"=t" |
213 |
|
else |
214 |
|
eval "HAVE_PTR0"$ii"=f" |
215 |
|
if test "x$ADM" = x -a "x$OADM" = x; then |
216 |
|
# remove this ptr from the list of output variable to check |
217 |
|
# echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 |
218 |
|
listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` |
219 |
|
fi |
220 |
|
fi |
221 |
|
# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' 1>&2 |
222 |
|
done |
223 |
|
tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'` |
224 |
if test $tst != 1 ; then |
if test $tst != 1 ; then |
225 |
if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2 |
if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2 |
226 |
else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi |
else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi |
238 |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
239 |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$? |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$? |
240 |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
241 |
'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;; |
'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;; |
242 |
'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;; |
'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;; |
243 |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;; |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;; |
244 |
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;; |
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;; |
245 |
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;; |
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;; |
264 |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
265 |
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
266 |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; |
267 |
|
'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; |
268 |
|
'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; |
269 |
|
'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; |
270 |
|
'Qntsd') testoutput_var $1 "forcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; |
271 |
|
'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;; |
272 |
|
'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;; |
273 |
|
'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;; |
274 |
|
'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;; |
275 |
|
'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;; |
276 |
|
'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Heff max" $2 $3; yy=$? ;; |
277 |
|
'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Heff mean" $2 $3; yy=$? ;; |
278 |
|
'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Heff StDv" $2 $3; yy=$? ;; |
279 |
|
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;; |
280 |
|
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;; |
281 |
|
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;; |
282 |
|
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;; |
283 |
|
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;; |
284 |
|
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;; |
285 |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
286 |
esac |
esac |
287 |
if test $xx = $sVar |
if test $xx = $sVar |
298 |
else |
else |
299 |
echo $allargs |
echo $allargs |
300 |
fi |
fi |
301 |
|
# <-- same processing for adjoint & forward test |
|
else |
|
|
testoutput_ad $1 $2 "precision_grdchk_result" |
|
|
fi |
|
302 |
} |
} |
303 |
|
|
304 |
genmakemodel() |
genmakemodel() |
315 |
( |
( |
316 |
cd $1; |
cd $1; |
317 |
command="$GENMAKE2 -ds -m $MAKE" |
command="$GENMAKE2 -ds -m $MAKE" |
318 |
if test "x$ADM" = x ; then |
if test "x$ADM" = xt ; then |
|
command="$command --mods=../code" |
|
|
else |
|
319 |
command="$command --mods=../code_ad" |
command="$command --mods=../code_ad" |
320 |
|
elif test "x$OADM" = xt ; then |
321 |
|
command="$command -adof ../../../tools/adjoint_options/adjoint_oad -mods '../code_oad ../../OpenAD/code_oad_all'" |
322 |
|
else |
323 |
|
command="$command -mods=../code" |
324 |
fi |
fi |
325 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
326 |
command="$command --optfile=$OPTFILE" |
command="$command -optfile=$OPTFILE" |
327 |
fi |
fi |
328 |
if test "x$IEEE" != x ; then |
if test "x$IEEE" != x ; then |
329 |
command="$command -ieee" |
command="$command -ieee" |
330 |
fi |
fi |
331 |
|
if test "x$GSL" = xt ; then |
332 |
|
command="$command -gsl" |
333 |
|
fi |
334 |
if test "x$MPI" = xt ; then |
if test "x$MPI" = xt ; then |
335 |
command="$command -mpi" |
command="$command -mpi" |
336 |
fi |
fi |
337 |
|
if test "x$MULTI_THREAD" = xt ; then |
338 |
|
#- run multi-threaded using OpenMP: |
339 |
|
command="$command -omp" |
340 |
|
fi |
341 |
if test "x$TS" = xt ; then |
if test "x$TS" = xt ; then |
342 |
command="$command -ts" |
command="$command -ts" |
343 |
fi |
fi |
349 |
fi |
fi |
350 |
fi |
fi |
351 |
printf 'genmake ... ' 1>&2 |
printf 'genmake ... ' 1>&2 |
352 |
$command > make.log 2>&1 |
# $command > make.log 2>&1 |
353 |
|
eval $command > make.log 2>&1 |
354 |
RETVAL=$? |
RETVAL=$? |
355 |
# Reduce the size of the testing emails! |
# Reduce the size of the testing emails! |
356 |
head -100 Makefile > $CDIR/Makefile_head |
head -100 Makefile > $CDIR/Makefile_head |
385 |
cp make.log $CDIR"/make.log" |
cp make.log $CDIR"/make.log" |
386 |
return 1 |
return 1 |
387 |
fi |
fi |
388 |
|
echo successful 1>&2 |
389 |
|
else |
390 |
|
echo '' |
391 |
fi |
fi |
|
echo successful 1>&2 |
|
392 |
exit 0 |
exit 0 |
393 |
) |
) |
394 |
fi |
fi |
410 |
find . -type l -exec rm {} \; |
find . -type l -exec rm {} \; |
411 |
rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime |
rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime |
412 |
rm -rf mnc_test_* |
rm -rf mnc_test_* |
413 |
|
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
414 |
echo successful 1>&2 |
echo successful 1>&2 |
415 |
exit 0 |
exit 0 |
416 |
) |
) |
447 |
cd $1; |
cd $1; |
448 |
if test -r Makefile ; then |
if test -r Makefile ; then |
449 |
printf 'make ... ' 1>&2 |
printf 'make ... ' 1>&2 |
450 |
if test "x$ADM" = x ; then |
if test "x$ADM" = xt ; then |
451 |
|
$MAKE adall >> make.log 2>&1 |
452 |
|
elif test "x$OADM" = xt ; then |
453 |
|
$MAKE adAll >> make.log 2>&1 |
454 |
|
else |
455 |
if test "x$JOBS" = x ; then |
if test "x$JOBS" = x ; then |
456 |
$MAKE >> make.log 2>&1 |
$MAKE >> make.log 2>&1 |
457 |
else |
else |
458 |
$MAKE -j $JOBS >> make.log 2>&1 |
$MAKE -j $JOBS >> make.log 2>&1 |
459 |
fi |
fi |
|
else |
|
|
$MAKE adall >> make.log 2>&1 |
|
460 |
fi |
fi |
461 |
RETVAL=$? |
RETVAL=$? |
462 |
if test "x$RETVAL" != x0 ; then |
if test "x$RETVAL" != x0 ; then |
463 |
tail make.log |
tail make.log |
464 |
echo failed 1>&2 |
echo failed 1>&2 |
465 |
cp make.log $CDIR"/make.log" |
cp make.log $CDIR"/make.log" |
466 |
|
rm -f $EXECUTABLE |
467 |
return 1 |
return 1 |
468 |
else |
else |
469 |
echo successful 1>&2 |
echo successful 1>&2 |
484 |
CODE_DIR=$dir/$code_dir |
CODE_DIR=$dir/$code_dir |
485 |
|
|
486 |
# These are files that should replace their counter-part when using -mpi |
# These are files that should replace their counter-part when using -mpi |
487 |
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi" -print)` |
488 |
|
|
489 |
# Is this an MPI run? |
# Is this an MPI run? |
490 |
if test "x$MPI" = xt ; then |
if test "x$MPI" = xt ; then |
528 |
if test -d $1 ; then |
if test -d $1 ; then |
529 |
( |
( |
530 |
cd $1 ; shift |
cd $1 ; shift |
531 |
|
inpMPI=`(cd ../$1 ; find . -name "*.mpi" -print | sed 's:^\./::')` |
532 |
|
for xx in $inpMPI ; do |
533 |
|
if test -r "../"$1"/"$xx ; then |
534 |
|
# found 1 _mpi sfx file in 1rst input dir and it is readable |
535 |
|
yy=`echo $xx | sed 's:\.mpi$::'` |
536 |
|
if test "x$MPI" = "xt" ; then |
537 |
|
# mpi test: remove symbolic link & link _mpi sfx file |
538 |
|
if test -h $yy ; then rm -f $yy ; fi |
539 |
|
if test ! -r $yy ; then |
540 |
|
ln -sf "../"$1"/"$xx $yy ; |
541 |
|
printf "$xx " 1>&2 |
542 |
|
fi |
543 |
|
else |
544 |
|
# not mpi test: remove symbolic link |
545 |
|
if test -h $yy ; then rm -f $yy ; fi |
546 |
|
fi |
547 |
|
fi |
548 |
|
done |
549 |
if test -r "../"$1"/eedata.mth" ; then |
if test -r "../"$1"/eedata.mth" ; then |
550 |
# found eedata.mth in 1rst input dir and it is readable |
# found eedata.mth in 1rst input dir and it is readable |
551 |
if test "x$MULTI_THREAD" = "xt" ; then |
if test "x$MULTI_THREAD" = "xt" ; then |
560 |
if test -h eedata ; then rm -f eedata ; fi |
if test -h eedata ; then rm -f eedata ; fi |
561 |
fi |
fi |
562 |
fi |
fi |
563 |
|
prevDir='NONE' |
564 |
for ldir in $* ; do |
for ldir in $* ; do |
565 |
if test -d "../"$ldir ; then |
if test -d "../"$ldir -a $ldir != $prevDir ; then |
566 |
printf 'ldir='${ldir} 1>&2 |
printf 'ldir='${ldir} 1>&2 |
567 |
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
568 |
for i in $files ; do |
for i in $files ; do |
578 |
fi |
fi |
579 |
printf ' ; ' 1>&2 |
printf ' ; ' 1>&2 |
580 |
fi |
fi |
581 |
|
prevDir=$ldir |
582 |
done |
done |
583 |
) |
) |
584 |
fi |
fi |
595 |
printf 'runmodel in %s ...' $1 1>&2 |
printf 'runmodel in %s ...' $1 1>&2 |
596 |
# make output.txt |
# make output.txt |
597 |
echo |
echo |
598 |
|
if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
599 |
|
diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1 |
600 |
|
outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; fi |
601 |
|
fi |
602 |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
603 |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00 |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp |
604 |
ln -sf "../"$builddir"/"$EXECUTABLE . |
ln -sf "../"$builddir"/"$EXECUTABLE . |
605 |
fi |
fi |
606 |
if test ! -x $EXECUTABLE ; then |
if test ! -x $EXECUTABLE ; then |
607 |
rm -f run.log ; touch run.log |
rm -f $RUNLOG ; touch $RUNLOG |
608 |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
609 |
echo " no executable:" $EXECUTABLE >> run.log |
echo " no executable:" $EXECUTABLE >> $RUNLOG |
610 |
RETVAL=8 |
RETVAL=8 |
611 |
ENDVAL=-1 |
ENDVAL=-1 |
612 |
else |
else |
613 |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
614 |
# output do not exist or is older than executable: |
# output do not exist or is older than executable: |
615 |
rm -f run.log ; touch run.log |
rm -f $RUNLOG ; touch $RUNLOG |
616 |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
617 |
( eval $COMMAND ) >> run.log 2>&1 |
( eval $COMMAND ) >> $RUNLOG 2>&1 |
618 |
RETVAL=$? |
RETVAL=$? |
619 |
else |
else |
620 |
RETVAL=0 |
RETVAL=0 |
621 |
if test -f run.log ; then |
if test -f $RUNLOG ; then |
622 |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
623 |
echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1 |
echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1 |
624 |
else |
else |
625 |
touch run.log |
touch $RUNLOG |
626 |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi |
627 |
echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1 |
echo "---------->> $OUTPUTFILE is up to date " >> $RUNLOG 2>&1 |
628 |
echo " no previous run.log: assume NORMAL END" >> run.log 2>&1 |
echo " no previous $RUNLOG: assume NORMAL END" >> $RUNLOG 2>&1 |
629 |
fi |
fi |
630 |
fi |
fi |
631 |
ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'` |
ENDVAL=`cat $RUNLOG | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'` |
632 |
fi |
fi |
633 |
rm -f run.log_00 |
rm -f run.log_tmp |
|
#if test "x$RETVAL" = x0 ; then |
|
634 |
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
635 |
tail run.log |
tail $RUNLOG |
636 |
echo successful 1>&2 |
echo successful 1>&2 |
637 |
# === Reduce the size of the testing emails! |
# === Reduce the size of the testing emails! |
638 |
#cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE |
#cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE |
639 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
640 |
return 0 |
return 0 |
641 |
|
elif [ $RETVAL -ne 0 -a $ENDVAL -gt 0 ] ; then |
642 |
|
#-- for some weird cases (run is finihed but with error code) |
643 |
|
tail $RUNLOG |
644 |
|
echo finished with error '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2 |
645 |
|
return 0 |
646 |
else |
else |
647 |
tail run.log |
tail $RUNLOG |
648 |
echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2 |
echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2 |
649 |
cp run.log $CDIR"/run.log" |
cp $RUNLOG $CDIR"/"$RUNLOG |
650 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
651 |
return 1 |
return 1 |
652 |
fi |
fi |
657 |
{ |
{ |
658 |
# create codelet for comparing model output |
# create codelet for comparing model output |
659 |
|
|
660 |
printf "creating the comparison code... " |
printf "creating the comparison code (using CC=$CC)... " |
661 |
cat > tr_cmpnum.c <<EOF |
cat > tr_cmpnum.c <<EOF |
662 |
#include <stdio.h> |
#include <stdio.h> |
663 |
#include <math.h> |
#include <math.h> |
747 |
} |
} |
748 |
|
|
749 |
|
|
750 |
|
check_eedata() |
751 |
|
{ |
752 |
|
# check_eedata size.h eedata |
753 |
|
if [ $# -eq 2 ] ; then |
754 |
|
if test -f $1 -a -f $2 ; then |
755 |
|
sx=`grep "^ & *nSx *=" $1 | sed "s/^ & *nSx *=//" | sed 's/, *$//'` |
756 |
|
nx=`grep "^ *nTx *=" $2 | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"` |
757 |
|
if test "x$nx" = x ; then |
758 |
|
rx=10 |
759 |
|
else |
760 |
|
rx=`expr $sx % $nx` |
761 |
|
fi |
762 |
|
sy=`grep "^ & *nSy *=" $1 | sed "s/^ & *nSy *=//" | sed 's/, *$//'` |
763 |
|
ny=`grep "^ *nTy *=" $2 | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"` |
764 |
|
if test "x$ny" = x ; then |
765 |
|
ry=20 |
766 |
|
else |
767 |
|
ry=`expr $sy % $ny` |
768 |
|
fi |
769 |
|
echo `expr $rx + $ry` |
770 |
|
else |
771 |
|
echo '-1' |
772 |
|
fi |
773 |
|
else |
774 |
|
echo '-2' |
775 |
|
fi |
776 |
|
|
777 |
|
} |
778 |
|
|
779 |
############################################################################### |
############################################################################### |
780 |
|
|
781 |
|
|
783 |
debug=0 |
debug=0 |
784 |
verbose=1 |
verbose=1 |
785 |
clean=0 |
clean=0 |
|
expts='' |
|
|
# ieee=1 |
|
786 |
|
|
787 |
IEEE=true |
IEEE=true |
788 |
if test "x$MITGCM_IEEE" != x ; then |
if test "x$MITGCM_IEEE" != x ; then |
789 |
IEEE=$MITGCM_IEEE |
IEEE=$MITGCM_IEEE |
790 |
fi |
fi |
791 |
|
GSL=f |
792 |
|
|
793 |
CLEANUP=f |
CLEANUP=f |
794 |
QUICK=f |
QUICK=f |
804 |
SKIPDIRS= |
SKIPDIRS= |
805 |
MPACKDIR="../tools/mpack-1.6" |
MPACKDIR="../tools/mpack-1.6" |
806 |
HAVE_MPACK= |
HAVE_MPACK= |
807 |
MPACK="$MPACKDIR/mpack" |
MPACK= |
808 |
COMMAND= |
COMMAND= |
809 |
if test "x$MAKE" = x ; then |
if test "x$MAKE" = x ; then |
810 |
MAKE=make |
MAKE=make |
819 |
DELDIR= |
DELDIR= |
820 |
|
|
821 |
ADM= |
ADM= |
822 |
|
OADM= |
823 |
|
|
824 |
# Additional monitor types |
# list of pTracers to check for monitor output |
825 |
PTRACERS_NUM="1 2 3 4 5" |
PTRACERS_NUM="1 2 3 4 5" |
826 |
|
|
827 |
MATCH_CRIT=13 |
MATCH_CRIT=13 |
854 |
ac_prev=ADDRESSES ;; |
ac_prev=ADDRESSES ;; |
855 |
-addr=* | --addr=*) |
-addr=* | --addr=*) |
856 |
ADDRESSES=$ac_optarg ;; |
ADDRESSES=$ac_optarg ;; |
857 |
|
-mpackdir | --mpackdir | -mpd | --mpd) |
858 |
|
ac_prev=MPACKDIR ;; |
859 |
|
-mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*) |
860 |
|
MPACKDIR=$ac_optarg ;; |
861 |
|
|
862 |
-tdir | --tdir | -t | --t) |
-tdir | --tdir | -t | --t) |
863 |
ac_prev=TESTDIRS ;; |
ac_prev=TESTDIRS ;; |
921 |
|
|
922 |
-adm | -ad) ADM=t ;; |
-adm | -ad) ADM=t ;; |
923 |
|
|
924 |
|
-oad) OADM=t; NODEPEND=t ;; |
925 |
|
|
926 |
-ieee) IEEE=true ;; |
-ieee) IEEE=true ;; |
927 |
-noieee) IEEE= ;; |
-noieee) IEEE= ;; |
928 |
|
-gsl) GSL=t ;; |
929 |
|
|
930 |
-verbose) verbose=2 ;; |
-verbose) verbose=2 ;; |
931 |
-debug) debug=1 ;; |
-debug) debug=1 ;; |
962 |
#- setting for forward or ADM testing |
#- setting for forward or ADM testing |
963 |
if test "x$ADM" = xt ; then |
if test "x$ADM" = xt ; then |
964 |
code_dir=code_ad |
code_dir=code_ad |
965 |
input_dirs='input_ad input' |
inputdir=input_ad |
966 |
ref_outp="output_adm.txt" |
ref_outp="output_adm.txt" |
967 |
EXECUTABLE="mitgcmuv_ad" |
EXECUTABLE="mitgcmuv_ad" |
968 |
|
elif test "x$OADM" = xt ; then |
969 |
|
code_dir=code_oad |
970 |
|
inputdir=input_oad |
971 |
|
ref_outp="output_oadm.txt" |
972 |
|
EXECUTABLE="mitgcmuv_ad" |
973 |
else |
else |
974 |
code_dir=code |
code_dir=code |
975 |
input_dirs='input' |
inputdir=input |
976 |
ref_outp="output.txt" |
ref_outp="output.txt" |
977 |
EXECUTABLE="mitgcmuv" |
EXECUTABLE="mitgcmuv" |
978 |
fi |
fi |
979 |
|
|
980 |
if test "x$TESTDIRS" = x ; then |
if test "x$TESTDIRS" = x ; then |
981 |
if test "x$ADM" = xt ; then |
LIST=`scandirs results/$ref_outp` |
|
LIST=`scandirs results_ad/$ref_outp` |
|
|
else |
|
|
LIST=`scandirs results/$ref_outp` |
|
|
fi |
|
982 |
else |
else |
983 |
#- expand group of experiments: |
#- expand group of experiments: |
984 |
LIST=" " |
LIST=" " |
1022 |
OPTFILE=$MITGCM_OF |
OPTFILE=$MITGCM_OF |
1023 |
fi |
fi |
1024 |
|
|
1025 |
|
RUNLOG="run.log" |
1026 |
OUTPUTFILE=$ref_outp |
OUTPUTFILE=$ref_outp |
1027 |
if test "x$COMMAND" = x ; then |
if test "x$COMMAND" = x ; then |
1028 |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
1031 |
OUTPUTFILE="STDOUT.0000" |
OUTPUTFILE="STDOUT.0000" |
1032 |
fi |
fi |
1033 |
|
|
|
#echo "OK" |
|
1034 |
echo "OK (COMMAND= $COMMAND )" |
echo "OK (COMMAND= $COMMAND )" |
1035 |
|
|
1036 |
# set the Default List of output variables to be checked: |
# set the Default List of output variables to be checked: |
1037 |
# (use default or load experiment-specific list from file "tr_checklist") |
# (use default or load experiment-specific list from file "tr_checklist") |
1038 |
# content : 1rst = main variable used to decide if it pass or FAIL |
# content : 1rst = main variable used to decide if it pass or FAIL |
1039 |
# others = number of matching digits to be printed in summary.txt |
# others = number of matching digits to be printed in summary.txt |
1040 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x -a "x$OADM" = x; then |
1041 |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
1042 |
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
1043 |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
1044 |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
1045 |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
1046 |
else |
else |
1047 |
DEF_CHECK_LIST='Cost Cost Grad' |
DEF_CHECK_LIST='Grad Cost Grad' |
1048 |
EMPTY_RESULTS='.. ..' |
EMPTY_RESULTS='.. ..' |
1049 |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
1050 |
fi |
fi |
1052 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
1053 |
createcodelet |
createcodelet |
1054 |
|
|
1055 |
# build the mpack utility |
# build the mpack utility (if ADDRESSES = NONE, do it to test the build) |
1056 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
if test "x$ADDRESSES" = x ; then |
1057 |
echo "skipping mpack build" |
echo "skipping mpack build" |
1058 |
else |
else |
1059 |
build_mpack |
build_mpack |
1060 |
fi |
fi |
1061 |
|
|
1062 |
# Create a uniquely named directory to store results |
# Create a uniquely named directory to store results |
1063 |
|
CMDLINE=$0 |
1064 |
|
for xx in "$@" ; do nw=`echo $xx | wc -w` |
1065 |
|
if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" |
1066 |
|
else CMDLINE="$CMDLINE '$xx'" ; fi |
1067 |
|
done |
1068 |
|
#for xx in "$@" ; do CMDLINE="$CMDLINE '$xx'" ; done |
1069 |
MACH=`hostname` |
MACH=`hostname` |
1070 |
UNAMEA=`uname -a` |
UNAMEA=`uname -a` |
1071 |
DATE=`date +%Y%m%d` |
DATE=`date +%Y%m%d` |
1072 |
BASE="tr_"$MACH"_"$DATE"_" |
BASE="tr_"$MACH"_"$DATE"_" |
1073 |
if test "x$OUTDIR" != x ; then |
if test "x$OUTDIR" != x ; then |
1074 |
BASE="tr_"$OUTDIR"_"$DATE"_" |
BASE="tr_"$OUTDIR"_"$DATE"_" |
1075 |
|
else |
1076 |
|
short_name=`hostname | sed 's/\..*$//'` |
1077 |
|
BASE="tr_"$short_name"_"$DATE"_" |
1078 |
fi |
fi |
1079 |
DNUM=0 |
DNUM=0 |
1080 |
DRESULTS="$BASE$DNUM" |
DRESULTS="$BASE$DNUM" |
1089 |
exit 1 |
exit 1 |
1090 |
fi |
fi |
1091 |
SUMMARY="$DRESULTS/summary.txt" |
SUMMARY="$DRESULTS/summary.txt" |
|
printf "Start time: " >> $SUMMARY |
|
1092 |
start_date=`date` |
start_date=`date` |
1093 |
echo $start_date > $SUMMARY |
echo $start_date > $SUMMARY |
1094 |
|
echo 'run:' $CMDLINE >> $SUMMARY |
1095 |
|
echo 'on :' $UNAMEA >> $SUMMARY |
1096 |
|
|
1097 |
of_path= |
of_path= |
1098 |
if test "x$OPTFILE" != xNONE ; then |
if test "x$OPTFILE" != xNONE ; then |
1121 |
fi |
fi |
1122 |
echo |
echo |
1123 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1124 |
if test "x$ADM" = x ; then |
if test "x$ADM" = x -a "x$OADM" = x; then |
1125 |
if [ $MATCH_CRIT -lt 10 ] ; |
if [ $MATCH_CRIT -lt 10 ] ; |
1126 |
then line_0="default "$MATCH_CRIT ; |
then line_0="default "$MATCH_CRIT ; |
1127 |
else line_0="default "$MATCH_CRIT ; fi |
else line_0="default "$MATCH_CRIT ; fi |
1132 |
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
1133 |
line_4="2 d e n d n x n . n x n . n x n . n x n ." |
line_4="2 d e n d n x n . n x n . n x n . n x n ." |
1134 |
for ii in $PTRACERS_NUM ; do |
for ii in $PTRACERS_NUM ; do |
|
# tst=`eval 'echo $HAVE_PTR0'$ii` |
|
|
# if test "x$tst" = xt ; then |
|
1135 |
line_0="$line_0 --PTR 0"$ii"--" |
line_0="$line_0 --PTR 0"$ii"--" |
1136 |
line_1="$line_1 m s" |
line_1="$line_1 m s" |
1137 |
line_2="$line_2 m m e ." |
line_2="$line_2 m m e ." |
1138 |
line_3="$line_3 i a a d" |
line_3="$line_3 i a a d" |
1139 |
line_4="$line_4 n x n ." |
line_4="$line_4 n x n ." |
|
# fi |
|
1140 |
done |
done |
1141 |
echo "$line_0" | tee -a $SUMMARY |
echo "$line_0" | tee -a $SUMMARY |
1142 |
echo "$line_1" | tee -a $SUMMARY |
echo "$line_1" | tee -a $SUMMARY |
1147 |
else |
else |
1148 |
echo "ADJOINT=true" >> $SUMMARY |
echo "ADJOINT=true" >> $SUMMARY |
1149 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1150 |
|
if [ $MATCH_CRIT -lt 10 ] ; |
1151 |
|
then line_0="default "$MATCH_CRIT ; |
1152 |
|
else line_0="default "$MATCH_CRIT ; fi |
1153 |
|
echo "$line_0" | tee -a $SUMMARY |
1154 |
cat << EOF | tee -a $SUMMARY |
cat << EOF | tee -a $SUMMARY |
1155 |
G D M C G |
G D M C G |
1156 |
E p a R o r |
E p a R o r |
1163 |
# ...and each test directory... |
# ...and each test directory... |
1164 |
for dir in $TESTDIRS ; do |
for dir in $TESTDIRS ; do |
1165 |
|
|
1166 |
|
# set builddir & rundir: |
1167 |
|
builddir="build" |
1168 |
|
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
1169 |
|
rundir="run" |
1170 |
|
if test ! -d $dir/$rundir ; then |
1171 |
|
rundir=$builddir |
1172 |
|
fi |
1173 |
|
CODE_DIR=$dir/$code_dir |
1174 |
|
BUILD_DIR=$dir/$builddir |
1175 |
|
|
1176 |
# Cleanup only! |
# Cleanup only! |
1177 |
if test "x$CLEANUP" = xt ; then |
if test "x$CLEANUP" = xt ; then |
1178 |
if test -r $dir/build/Makefile ; then |
echo -n ' --- dir:' $BUILD_DIR ': ' |
1179 |
echo ' ------ clean dir:' $dir/build |
makeclean $BUILD_DIR |
1180 |
( cd $dir/build ; make CLEAN ) |
rm -f $BUILD_DIR/$EXECUTABLE |
1181 |
fi |
if test -d $dir/$rundir/CVS ; then |
1182 |
if test -d $dir/run/CVS ; then |
echo -n ' --- dir:' $dir/$rundir ': ' |
1183 |
echo ' ------ clean dir:' $dir/run |
run_clean $dir/$rundir |
1184 |
run_clean $dir/run |
fi |
1185 |
|
trdir=`( cd $dir ; find . -type d -name "tr_run.*" -print | sed 's/^.\///')` |
1186 |
|
ttd=`echo $trdir | wc -w` |
1187 |
|
if test $ttd != 0 ; then |
1188 |
|
echo ' --- rm dir:' $trdir |
1189 |
|
( cd $dir ; rm -rf $trdir ) |
1190 |
fi |
fi |
|
( |
|
|
cd $dir |
|
|
rm -rf tr_run.* |
|
|
) |
|
1191 |
continue |
continue |
1192 |
fi |
fi |
1193 |
|
|
1194 |
# Verify that the testdir exists and contains previous |
# Verify that the testdir exists and contains previous |
1195 |
# results in the correct location--or skip this directory! |
# results in the correct location--or skip this directory! |
1196 |
fout= |
fout=$dir"/results/"$ref_outp |
|
if test "x$ADM" = x ; then |
|
|
fout=$dir"/results/"$ref_outp |
|
|
else |
|
|
fout=$dir"/results_ad/"$ref_outp |
|
|
fi |
|
1197 |
if test ! -r $fout ; then |
if test ! -r $fout ; then |
1198 |
echo "can't read \"$fout\" -- skipping $dir" |
echo "can't read \"$fout\" -- skipping $dir" |
1199 |
continue |
continue |
1200 |
fi |
fi |
|
if test "x$ADM" = x ; then |
|
|
check_for_add_mon_output $fout |
|
|
fi |
|
1201 |
|
|
1202 |
# Check for additional types of monitor output |
# Check for specific files for particular type of run |
|
|
|
|
builddir="build" |
|
|
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
|
|
rundir="run" |
|
|
if test ! -d $dir/$rundir ; then |
|
|
rundir=$builddir |
|
|
fi |
|
|
CODE_DIR=$dir/$code_dir |
|
|
BUILD_DIR=$dir/$builddir |
|
1203 |
|
|
1204 |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
1205 |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
1209 |
echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir" |
echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir" |
1210 |
continue |
continue |
1211 |
fi |
fi |
1212 |
|
if test "x$MPI" = "xt" -a "x$MULTI_THREAD" = "xt" ; then |
1213 |
|
retv=`check_eedata $CODE_DIR"/SIZE.h_mpi" $dir"/input/eedata.mth"` |
1214 |
|
if test $retv != 0 ; then |
1215 |
|
echo "input/eedata.mth tiling misfit -- skipping $dir" |
1216 |
|
continue |
1217 |
|
fi |
1218 |
|
fi |
1219 |
|
|
1220 |
# Check whether there are "extra runs" for this testdir |
# Check whether there are "extra runs" for this testdir |
1221 |
extra_runs= |
extra_runs= |
1222 |
if test "x$ADM" = x ; then |
ex_run_dirs=`( cd $dir ; echo $inputdir.* )` |
1223 |
ex_run_dirs=`( cd $dir ; echo input.* )` |
#echo "ex_run_dirs='$ex_run_dirs'" |
1224 |
#echo "ex_run_dirs='$ex_run_dirs'" |
for exd in $ex_run_dirs ; do |
1225 |
for exd in $ex_run_dirs ; do |
name=`echo $exd | sed -e "s/$inputdir\.//"` |
1226 |
name=`echo $exd | sed -e 's/input.//g'` |
refExOut=`echo $ref_outp | sed "s/\./.${name}./"` |
1227 |
outf="$dir/results/output.$name.txt" |
outf="$dir/results/$refExOut" |
1228 |
if test -f $outf -a -r $outf ; then |
if test -f $outf -a -r $outf ; then |
1229 |
if test "x$MULTI_THREAD" = "xt" ; then |
if test "x$MULTI_THREAD" = "xt" ; then |
1230 |
if test -r $dir"/"$exd"/eedata.mth" ; then |
if test -r $dir"/"$exd"/eedata.mth" ; then |
1231 |
extra_runs="$extra_runs $name" |
if test "x$MPI" = "xt" ; then |
1232 |
#else echo $dir"/"$exd"/eedata.mth: not found" |
retv=`check_eedata $CODE_DIR"/SIZE.h_mpi" $dir"/"$exd"/eedata.mth"` |
1233 |
fi |
if test $retv = 0 ; then |
|
else |
|
1234 |
extra_runs="$extra_runs $name" |
extra_runs="$extra_runs $name" |
1235 |
|
else |
1236 |
|
echo $exd"/eedata.mth tiling misfit -- skipping $dir" |
1237 |
fi |
fi |
1238 |
|
else |
1239 |
|
extra_runs="$extra_runs $name" |
1240 |
|
fi |
1241 |
|
#else echo $dir"/"$exd"/eedata.mth: not found" |
1242 |
fi |
fi |
1243 |
done |
else |
1244 |
fi |
extra_runs="$extra_runs $name" |
1245 |
|
fi |
1246 |
|
fi |
1247 |
|
done |
1248 |
|
|
1249 |
echo "-------------------------------------------------------------------------------" |
echo "-------------------------------------------------------------------------------" |
1250 |
echo |
echo |
1273 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
&& symlink_mpifiles $dir $code_dir $builddir \ |
1274 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
1275 |
&& makemodel $dir/$builddir && make=Y \ |
&& makemodel $dir/$builddir && make=Y \ |
1276 |
&& linkdata $dir/$rundir $input_dirs \ |
&& linkdata $dir/$rundir $inputdir input \ |
1277 |
&& runmodel $dir/$rundir && run=Y \ |
&& runmodel $dir/$rundir && run=Y \ |
1278 |
&& results=`testoutput_run $dir $rundir $ref_outp` |
&& results=`testoutput_run $dir $rundir $ref_outp` |
1279 |
fi |
fi |
1280 |
|
|
1281 |
echo |
echo |
|
if test "x$ADM" = x ; then |
|
1282 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1283 |
echo |
echo |
1284 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1285 |
touch $CDIR"/summary.txt" |
touch $CDIR"/summary.txt" |
1286 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1287 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1288 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1289 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1290 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1291 |
|
if test "x$ADM" = xt ; then |
1292 |
|
head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" |
1293 |
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
1294 |
|
>> $CDIR"/summary.txt" |
1295 |
|
fi |
1296 |
|
|
1297 |
for ex in $extra_runs ; do |
for ex in $extra_runs ; do |
1298 |
unset run |
unset run |
1299 |
results=$EMPTY_RESULTS |
results=$EMPTY_RESULTS |
1300 |
|
# reference output file |
1301 |
|
refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"` |
1302 |
# Create an output dir for each OPTFILE/tdir.ex combination |
# Create an output dir for each OPTFILE/tdir.ex combination |
1303 |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
1304 |
mkdir $rel_CDIR |
mkdir $rel_CDIR |
1305 |
CDIR=`pwd`"/$rel_CDIR" |
CDIR=`pwd`"/$rel_CDIR" |
1306 |
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
1307 |
run_clean $dir/tr_run.$ex |
run_clean $dir/tr_run.$ex |
1308 |
linkdata $dir/tr_run.$ex input.$ex input |
linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input |
1309 |
runmodel $dir/tr_run.$ex && run=Y \ |
runmodel $dir/tr_run.$ex && run=Y \ |
1310 |
&& results=`testoutput_run $dir tr_run.$ex "output.${ex}.txt"` |
&& results=`testoutput_run $dir tr_run.$ex $refExOut` |
1311 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1312 |
fres="$fres.$ex" |
fres="$fres.$ex" |
1313 |
echo |
echo |
1314 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1315 |
touch $CDIR"/summary.txt" |
touch $CDIR"/summary.txt" |
1316 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1317 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1318 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1319 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1320 |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
1321 |
|
if test "x$ADM" = xt ; then |
1322 |
|
head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" |
1323 |
|
grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \ |
1324 |
|
>> $CDIR"/summary.txt" |
1325 |
|
fi |
1326 |
if test "x$POSTCLEAN" = xt ; then |
if test "x$POSTCLEAN" = xt ; then |
1327 |
run_clean $dir/tr_run.$ex |
run_clean $dir/tr_run.$ex |
1328 |
fi |
fi |
1329 |
done |
done |
|
else |
|
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
|
|
fres=$fres"$results $dir" |
|
|
echo |
|
|
echo "$fres" >> $SUMMARY |
|
|
touch $CDIR"/summary.txt" |
|
|
echo "fresults='$fres'" >> $CDIR"/summary.txt" |
|
|
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
|
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
|
|
fi |
|
|
if test "x$ADM" = xt ; then |
|
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
|
|
>> $CDIR"/summary.txt" |
|
|
fi |
|
1330 |
|
|
1331 |
#postclean $dir/$builddir |
#postclean $dir/$builddir |
1332 |
if test "x$POSTCLEAN" = xt ; then |
if test "x$POSTCLEAN" = xt ; then |
1339 |
done |
done |
1340 |
|
|
1341 |
printf "Start time: " >> $SUMMARY |
printf "Start time: " >> $SUMMARY |
1342 |
echo $start_date >> $SUMMARY |
echo "$start_date" >> $SUMMARY |
1343 |
printf "End time: " >> $SUMMARY |
printf "End time: " >> $SUMMARY |
1344 |
date >> $SUMMARY |
date >> $SUMMARY |
1345 |
|
|
1364 |
echo "An email containing results was sent to the following addresses:" |
echo "An email containing results was sent to the following addresses:" |
1365 |
echo " \"$ADDRESSES\"" |
echo " \"$ADDRESSES\"" |
1366 |
echo |
echo |
1367 |
|
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
1368 |
|
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
1369 |
fi |
fi |
|
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
|
|
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
|
1370 |
fi |
fi |
1371 |
fi |
fi |
1372 |
|
|
1373 |
rm -f tr_cmpnum.c tr_cmpnum |
rm -f tr_cmpnum.c tr_cmpnum |
1374 |
|
|
1375 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
1376 |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \.//' |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //' |
1377 |
if test -e tr_out.txt ; then |
if test -e tr_out.txt ; then |
1378 |
mv tr_out.txt tr_out.txt.old |
mv tr_out.txt tr_out.txt.old |
1379 |
fi |
fi |
1380 |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \.//g' > tr_out.txt |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt |
1381 |
fi |
fi |
1382 |
|
|
1383 |
if test "x$DELDIR" = xt ; then |
if test "x$DELDIR" = xt ; then |