15 |
echo " (-mpi) compile and run using MPI" |
echo " (-mpi) compile and run using MPI" |
16 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
17 |
echo " (DEF=\"-ieee\")" |
echo " (DEF=\"-ieee\")" |
18 |
|
echo " (-gsl) compile with \"-gsl\" flag" |
19 |
echo " (-of=|-optfile=)STRING list of optfiles to use" |
echo " (-of=|-optfile=)STRING list of optfiles to use" |
20 |
echo " (-a|-addr) STRING list of email recipients" |
echo " (-a|-addr) STRING list of email recipients" |
21 |
echo " (DEF=\"edhill@mitgcm.org\")" |
echo " (DEF=\"\" no email is sent)" |
22 |
echo " (-t|-tdir) STRING list of group and/or exp. dirs to test" |
echo " (-t|-tdir) STRING list of group and/or exp. dirs to test" |
23 |
echo " (recognized groups: basic, tutorials)" |
echo " (recognized groups: basic, tutorials)" |
24 |
echo " (DEF=\"\" which test all)" |
echo " (DEF=\"\" which test all)" |
97 |
|
|
98 |
testoutput_var() |
testoutput_var() |
99 |
{ |
{ |
100 |
# testoutput_var dir s1 label subdir extension |
# testoutput_var dir s1 label subdir reference_output |
101 |
# |
# |
102 |
# compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE |
# compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE |
103 |
# with same output from reference file $dir/results/output.$extension |
# with same output from reference file $dir/results/$reference_output |
104 |
# using search strings s1 and text label |
# using search strings s1 and text label |
105 |
|
|
106 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
109 |
if [ -r $1/$4/$OUTPUTFILE ]; then |
if [ -r $1/$4/$OUTPUTFILE ]; then |
110 |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
111 |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
112 |
if [ $lncntA -lt 3 ]; then |
if [ $lncntA -lt 2 ]; then |
113 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
114 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
115 |
fi |
fi |
120 |
return 99 |
return 99 |
121 |
fi |
fi |
122 |
if [ $debug -gt 0 ]; then |
if [ $debug -gt 0 ]; then |
123 |
echo testoutput_var: grep "$2" $1/results/output.$5 1>&2 |
echo testoutput_var: grep "$2" $1/results/$5 1>&2 |
124 |
fi |
fi |
125 |
grep "$2" $1/results/output.$5 | sed 's/.*=//' | cat -n > tmp2.txt |
grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
126 |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
127 |
if [ $lncntB -lt 3 ]; then |
if [ $lncntB -lt 2 ]; then |
128 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
129 |
echo Not enough lines of output when searching for "$2" 1>&2 |
echo Not enough lines of output when searching for "$2" 1>&2 |
130 |
fi |
fi |
162 |
digits_of_similarity=`./tr_cmpnum < tmp4.txt` |
digits_of_similarity=`./tr_cmpnum < tmp4.txt` |
163 |
if [ $digits_of_similarity -eq 99 ]; then |
if [ $digits_of_similarity -eq 99 ]; then |
164 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
165 |
echo testoutput_var: No comparison was available for \"$2\" 1>&2 |
echo testoutput_var: No comparison was available for \"$3\" 1>&2 |
166 |
fi |
fi |
167 |
digits_of_similarity=99 |
digits_of_similarity=99 |
168 |
else |
else |
169 |
if [ $verbose -gt 0 ]; then |
if [ $verbose -gt 0 ]; then |
170 |
echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2 |
171 |
fi |
fi |
172 |
fi |
fi |
173 |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
175 |
return $digits_of_similarity |
return $digits_of_similarity |
176 |
} |
} |
177 |
|
|
|
dashnum() |
|
|
{ |
|
|
# dashnum n1 n2 n3 ... |
|
|
# |
|
|
# print numbers using %3i format or "--" if number = 99 |
|
|
|
|
|
for num in $@ ; do |
|
|
if [ $num = 99 ]; then |
|
|
printf ' --' |
|
|
else |
|
|
printf '%3i' $num |
|
|
fi |
|
|
done |
|
|
} |
|
|
|
|
|
testoutput_ad() |
|
|
{ |
|
|
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $5}' > t05.txt |
|
|
grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $5}' > t15.txt |
|
|
grep $3 $1/results_ad/output_adm.txt | awk '{print NR " " $6}' > t06.txt |
|
|
grep $3 $1/$2/$OUTPUTFILE | awk '{print NR " " $6}' > t16.txt |
|
|
join t05.txt t15.txt > t5.txt |
|
|
join t06.txt t16.txt > t6.txt |
|
|
echo "-1" >> t5.txt |
|
|
echo "-1" >> t6.txt |
|
|
digits_5=`./tr_cmpnum < t5.txt` |
|
|
digits_6=`./tr_cmpnum < t6.txt` |
|
|
dashnum $digits_5 $digits_6 |
|
|
rm -f t[01][56].txt t[56].txt |
|
|
} |
|
|
|
|
178 |
check_for_add_mon_output() |
check_for_add_mon_output() |
179 |
{ |
{ |
180 |
# Check for additional types of monitor output |
# Check for additional types of monitor output |
202 |
|
|
203 |
testoutput_run() |
testoutput_run() |
204 |
{ |
{ |
205 |
# testoutput_run directory subdir extension |
# testoutput_run directory subdir reference_output |
206 |
# |
# |
207 |
# test output from 1 run in "directory" |
# test output from 1 run in "directory" |
208 |
if test "x$ADM" = x ; then |
# --> same processing for adjoint & forward test |
209 |
# default list of output variables to be checked: |
# default list of output variables to be checked: |
210 |
# 1rst : main variable used to decide if it pass or FAIL |
# 1rst : main variable used to decide if it pass or FAIL |
211 |
# others : number of matching digits to be printed in summary.txt |
# others : number of matching digits to be printed in summary.txt |
238 |
case $xx in |
case $xx in |
239 |
'PS') if [ $debug -gt 0 ] |
'PS') if [ $debug -gt 0 ] |
240 |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
241 |
testoutput_var $1 "cg2d_init_res" "cg2d init. residual" $2 $3; yy=$? |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$? |
242 |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
243 |
'Tmn') testoutput_var $1 "dynstat_theta_min" "theta minimum" $2 $3; yy=$? ;; |
'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;; |
244 |
'Tmx') testoutput_var $1 "dynstat_theta_max" "theta maximum" $2 $3; yy=$? ;; |
'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;; |
245 |
'Tav') testoutput_var $1 "dynstat_theta_mean" "theta mean" $2 $3; yy=$? ;; |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;; |
246 |
'Tsd') testoutput_var $1 "dynstat_theta_sd" "theta s.d." $2 $3; yy=$? ;; |
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;; |
247 |
'Smn') testoutput_var $1 "dynstat_salt_min" "salt minimum" $2 $3; yy=$? ;; |
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;; |
248 |
'Smx') testoutput_var $1 "dynstat_salt_max" "salt maximum" $2 $3; yy=$? ;; |
'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;; |
249 |
'Sav') testoutput_var $1 "dynstat_salt_mean" "salt mean" $2 $3; yy=$? ;; |
'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;; |
250 |
'Ssd') testoutput_var $1 "dynstat_salt_sd" "salt s.d." $2 $3; yy=$? ;; |
'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;; |
251 |
|
'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;; |
252 |
|
'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;; |
253 |
'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;; |
'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;; |
254 |
'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;; |
'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;; |
255 |
'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;; |
'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;; |
256 |
'Usd') testoutput_var $1 "dynstat_uvel_sd" "U s.d." $2 $3; yy=$? ;; |
'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;; |
257 |
'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;; |
'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;; |
258 |
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;; |
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;; |
259 |
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;; |
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;; |
260 |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V s.d." $2 $3; yy=$? ;; |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;; |
261 |
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
262 |
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;; |
263 |
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
265 |
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
266 |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
267 |
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
268 |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_sd" $2 $3; yy=$? ;; |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; |
269 |
|
'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; |
270 |
|
'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; |
271 |
|
'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; |
272 |
|
'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; |
273 |
|
'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;; |
274 |
|
'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;; |
275 |
|
'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;; |
276 |
|
'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;; |
277 |
|
'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;; |
278 |
|
'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;; |
279 |
|
'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;; |
280 |
|
'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;; |
281 |
|
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;; |
282 |
|
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;; |
283 |
|
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;; |
284 |
|
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;; |
285 |
|
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;; |
286 |
|
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;; |
287 |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
288 |
esac |
esac |
289 |
if test $xx = $sVar |
if test $xx = $sVar |
300 |
else |
else |
301 |
echo $allargs |
echo $allargs |
302 |
fi |
fi |
303 |
|
# <-- same processing for adjoint & forward test |
|
else |
|
|
testoutput_ad $1 $2 "precision_grdchk_result" |
|
|
fi |
|
304 |
} |
} |
305 |
|
|
306 |
genmakemodel() |
genmakemodel() |
328 |
if test "x$IEEE" != x ; then |
if test "x$IEEE" != x ; then |
329 |
command="$command -ieee" |
command="$command -ieee" |
330 |
fi |
fi |
331 |
|
if test "x$GSL" = xt ; then |
332 |
|
command="$command -gsl" |
333 |
|
fi |
334 |
if test "x$MPI" = xt ; then |
if test "x$MPI" = xt ; then |
335 |
command="$command -mpi" |
command="$command -mpi" |
336 |
fi |
fi |
403 |
find . -type l -exec rm {} \; |
find . -type l -exec rm {} \; |
404 |
rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime |
rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime |
405 |
rm -rf mnc_test_* |
rm -rf mnc_test_* |
406 |
|
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
407 |
echo successful 1>&2 |
echo successful 1>&2 |
408 |
exit 0 |
exit 0 |
409 |
) |
) |
532 |
if test -h eedata ; then rm -f eedata ; fi |
if test -h eedata ; then rm -f eedata ; fi |
533 |
fi |
fi |
534 |
fi |
fi |
535 |
|
prevDir='NONE' |
536 |
for ldir in $* ; do |
for ldir in $* ; do |
537 |
if test -d "../"$ldir ; then |
if test -d "../"$ldir -a $ldir != $prevDir ; then |
538 |
printf 'ldir='${ldir} 1>&2 |
printf 'ldir='${ldir} 1>&2 |
539 |
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
540 |
for i in $files ; do |
for i in $files ; do |
550 |
fi |
fi |
551 |
printf ' ; ' 1>&2 |
printf ' ; ' 1>&2 |
552 |
fi |
fi |
553 |
|
prevDir=$ldir |
554 |
done |
done |
555 |
) |
) |
556 |
fi |
fi |
567 |
printf 'runmodel in %s ...' $1 1>&2 |
printf 'runmodel in %s ...' $1 1>&2 |
568 |
# make output.txt |
# make output.txt |
569 |
echo |
echo |
570 |
|
if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
571 |
|
diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1 |
572 |
|
outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; rm -f run.log ; fi |
573 |
|
fi |
574 |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
575 |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00 |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00 |
576 |
ln -sf "../"$builddir"/"$EXECUTABLE . |
ln -sf "../"$builddir"/"$EXECUTABLE . |
582 |
RETVAL=8 |
RETVAL=8 |
583 |
ENDVAL=-1 |
ENDVAL=-1 |
584 |
else |
else |
585 |
if test $OUTPUTFILE -ot $EXECUTABLE ; then |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
586 |
|
# output do not exist or is older than executable: |
587 |
rm -f run.log ; touch run.log |
rm -f run.log ; touch run.log |
588 |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
589 |
( eval $COMMAND ) >> run.log 2>&1 |
( eval $COMMAND ) >> run.log 2>&1 |
682 |
listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'` |
listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'` |
683 |
xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'` |
xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'` |
684 |
printf '%3s' $listPrt |
printf '%3s' $listPrt |
685 |
|
# line below does not work on hp-ux_ia64 : do those substitutions later on |
686 |
# printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' |
# printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' |
|
# printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > / /' | sed 's/ < / /' |
|
687 |
|
|
688 |
if [ $xx = '..' ]; then |
if [ $xx = '..' ]; then |
689 |
printf ' N/O ' |
printf ' N/O ' |
707 |
{ |
{ |
708 |
if [ $# -eq 1 ]; then |
if [ $# -eq 1 ]; then |
709 |
for arg in * ; do |
for arg in * ; do |
710 |
test -d $arg/$1 && echo $arg |
test -f $arg/$1 && echo $arg |
711 |
done |
done |
712 |
else |
else |
713 |
echo $* |
echo $* |
722 |
debug=0 |
debug=0 |
723 |
verbose=1 |
verbose=1 |
724 |
clean=0 |
clean=0 |
|
expts='' |
|
|
# ieee=1 |
|
725 |
|
|
726 |
IEEE=true |
IEEE=true |
727 |
if test "x$MITGCM_IEEE" != x ; then |
if test "x$MITGCM_IEEE" != x ; then |
728 |
IEEE=$MITGCM_IEEE |
IEEE=$MITGCM_IEEE |
729 |
fi |
fi |
730 |
|
GSL=f |
731 |
|
|
732 |
CLEANUP=f |
CLEANUP=f |
733 |
QUICK=f |
QUICK=f |
857 |
|
|
858 |
-ieee) IEEE=true ;; |
-ieee) IEEE=true ;; |
859 |
-noieee) IEEE= ;; |
-noieee) IEEE= ;; |
860 |
|
-gsl) GSL=t ;; |
861 |
|
|
862 |
-verbose) verbose=2 ;; |
-verbose) verbose=2 ;; |
863 |
-debug) debug=1 ;; |
-debug) debug=1 ;; |
891 |
NODEPEND=t |
NODEPEND=t |
892 |
fi |
fi |
893 |
|
|
894 |
|
#- setting for forward or ADM testing |
895 |
|
if test "x$ADM" = xt ; then |
896 |
|
code_dir=code_ad |
897 |
|
inputdir=input_ad |
898 |
|
ref_outp="output_adm.txt" |
899 |
|
EXECUTABLE="mitgcmuv_ad" |
900 |
|
else |
901 |
|
code_dir=code |
902 |
|
inputdir=input |
903 |
|
ref_outp="output.txt" |
904 |
|
EXECUTABLE="mitgcmuv" |
905 |
|
fi |
906 |
|
|
907 |
if test "x$TESTDIRS" = x ; then |
if test "x$TESTDIRS" = x ; then |
908 |
if test "x$ADM" = xt ; then |
LIST=`scandirs results/$ref_outp` |
|
LIST=`scandirs results_ad` |
|
|
else |
|
|
LIST=`scandirs results` |
|
|
fi |
|
909 |
else |
else |
910 |
#- expand group of experiments: |
#- expand group of experiments: |
911 |
LIST=" " |
LIST=" " |
949 |
OPTFILE=$MITGCM_OF |
OPTFILE=$MITGCM_OF |
950 |
fi |
fi |
951 |
|
|
952 |
if test "x$ADM" = xt ; then |
OUTPUTFILE=$ref_outp |
|
EXECUTABLE="mitgcmuv_ad" |
|
|
OUTPUTFILE="output_adm.txt" |
|
|
else |
|
|
EXECUTABLE="mitgcmuv" |
|
|
OUTPUTFILE="output.txt" |
|
|
fi |
|
|
|
|
953 |
if test "x$COMMAND" = x ; then |
if test "x$COMMAND" = x ; then |
954 |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
955 |
fi |
fi |
957 |
OUTPUTFILE="STDOUT.0000" |
OUTPUTFILE="STDOUT.0000" |
958 |
fi |
fi |
959 |
|
|
|
#echo "OK" |
|
960 |
echo "OK (COMMAND= $COMMAND )" |
echo "OK (COMMAND= $COMMAND )" |
961 |
|
|
962 |
# set the Default List of output variables to be checked: |
# set the Default List of output variables to be checked: |
963 |
# (use default or load experiment-specific list from file "tr_checklist") |
# (use default or load experiment-specific list from file "tr_checklist") |
964 |
# content : 1rst = main variable used to decide if it pass or FAIL |
# content : 1rst = main variable used to decide if it pass or FAIL |
965 |
# others = number of matching digits to be printed in summary.txt |
# others = number of matching digits to be printed in summary.txt |
966 |
if test "x$ADM" != xt ; then |
if test "x$ADM" = x ; then |
967 |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
968 |
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
969 |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
970 |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
971 |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
972 |
|
else |
973 |
|
DEF_CHECK_LIST='Grad Cost Grad' |
974 |
|
EMPTY_RESULTS='.. ..' |
975 |
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
976 |
fi |
fi |
977 |
|
|
978 |
# create the FORTRAN comparison code |
# create the FORTRAN comparison code |
1066 |
else |
else |
1067 |
echo "ADJOINT=true" >> $SUMMARY |
echo "ADJOINT=true" >> $SUMMARY |
1068 |
echo >> $SUMMARY |
echo >> $SUMMARY |
1069 |
|
if [ $MATCH_CRIT -lt 10 ] ; |
1070 |
|
then line_0="default "$MATCH_CRIT ; |
1071 |
|
else line_0="default "$MATCH_CRIT ; fi |
1072 |
|
echo "$line_0" | tee -a $SUMMARY |
1073 |
cat << EOF | tee -a $SUMMARY |
cat << EOF | tee -a $SUMMARY |
1074 |
G D M C G |
G D M C G |
1075 |
E p a R o r |
E p a R o r |
1082 |
# ...and each test directory... |
# ...and each test directory... |
1083 |
for dir in $TESTDIRS ; do |
for dir in $TESTDIRS ; do |
1084 |
|
|
1085 |
|
# set builddir & rundir: |
1086 |
|
builddir="build" |
1087 |
|
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
1088 |
|
rundir="run" |
1089 |
|
if test ! -d $dir/$rundir ; then |
1090 |
|
rundir=$builddir |
1091 |
|
fi |
1092 |
|
CODE_DIR=$dir/$code_dir |
1093 |
|
BUILD_DIR=$dir/$builddir |
1094 |
|
|
1095 |
# Cleanup only! |
# Cleanup only! |
1096 |
if test "x$CLEANUP" = xt ; then |
if test "x$CLEANUP" = xt ; then |
1097 |
if test -r $dir/build/Makefile ; then |
if test -r $BUILD_DIR/Makefile ; then |
1098 |
echo ' ------ clean dir:' $dir/build |
echo ' ------ clean dir:' $dir/build |
1099 |
( cd $dir/build ; make CLEAN ) |
( cd $BUILD_DIR ; make CLEAN ) |
1100 |
fi |
fi |
1101 |
if test -d $dir/run/CVS ; then |
if test -d $dir/$rundir/CVS ; then |
1102 |
echo ' ------ clean dir:' $dir/run |
echo ' ------ clean dir:' $dir/$rundir |
1103 |
run_clean $dir/run |
run_clean $dir/$rundir |
1104 |
fi |
fi |
1105 |
( |
( |
1106 |
cd $dir |
cd $dir |
1111 |
|
|
1112 |
# Verify that the testdir exists and contains previous |
# Verify that the testdir exists and contains previous |
1113 |
# results in the correct location--or skip this directory! |
# results in the correct location--or skip this directory! |
1114 |
fout= |
fout=$dir"/results/"$ref_outp |
|
if test "x$ADM" = x ; then |
|
|
fout=$dir"/results/output.txt" |
|
|
else |
|
|
fout=$dir"/results_ad/output_adm.txt" |
|
|
fi |
|
1115 |
if test ! -r $fout ; then |
if test ! -r $fout ; then |
1116 |
echo "can't read \"$fout\" -- skipping $dir" |
echo "can't read \"$fout\" -- skipping $dir" |
1117 |
continue |
continue |
1122 |
|
|
1123 |
# Check for additional types of monitor output |
# Check for additional types of monitor output |
1124 |
|
|
|
builddir="build" |
|
|
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
|
|
rundir="run" |
|
|
#rundir=$builddir |
|
|
if test ! -d $dir/$rundir ; then |
|
|
rundir=$builddir |
|
|
fi |
|
|
|
|
|
if test "x$ADM" = x ; then |
|
|
code_dir=code |
|
|
CODE_DIR=$dir/code |
|
|
input_dirs='input' |
|
|
else |
|
|
code_dir=code_ad |
|
|
CODE_DIR=$dir/code_ad |
|
|
input_dirs='input_ad input' |
|
|
fi |
|
|
BUILD_DIR=$dir/$builddir |
|
|
|
|
1125 |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
1126 |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
1127 |
continue |
continue |
1133 |
|
|
1134 |
# Check whether there are "extra runs" for this testdir |
# Check whether there are "extra runs" for this testdir |
1135 |
extra_runs= |
extra_runs= |
1136 |
if test "x$ADM" = x ; then |
ex_run_dirs=`( cd $dir ; echo $inputdir.* )` |
1137 |
ex_run_dirs=`( cd $dir ; echo input.* )` |
#echo "ex_run_dirs='$ex_run_dirs'" |
1138 |
#echo "ex_run_dirs='$ex_run_dirs'" |
for exd in $ex_run_dirs ; do |
1139 |
for exd in $ex_run_dirs ; do |
name=`echo $exd | sed -e "s/$inputdir\.//"` |
1140 |
name=`echo $exd | sed -e 's/input.//g'` |
refExOut=`echo $ref_outp | sed "s/\./.${name}./"` |
1141 |
outf="$dir/results/output.$name.txt" |
outf="$dir/results/$refExOut" |
1142 |
if test -f $outf -a -r $outf ; then |
if test -f $outf -a -r $outf ; then |
1143 |
if test "x$MULTI_THREAD" = "xt" ; then |
if test "x$MULTI_THREAD" = "xt" ; then |
1144 |
if test -r $dir"/"$exd"/eedata.mth" ; then |
if test -r $dir"/"$exd"/eedata.mth" ; then |
|
extra_runs="$extra_runs $name" |
|
|
#else echo $dir"/"$exd"/eedata.mth: not found" |
|
|
fi |
|
|
else |
|
1145 |
extra_runs="$extra_runs $name" |
extra_runs="$extra_runs $name" |
1146 |
|
#else echo $dir"/"$exd"/eedata.mth: not found" |
1147 |
fi |
fi |
1148 |
|
else |
1149 |
|
extra_runs="$extra_runs $name" |
1150 |
fi |
fi |
1151 |
done |
fi |
1152 |
fi |
done |
1153 |
|
|
1154 |
echo "-------------------------------------------------------------------------------" |
echo "-------------------------------------------------------------------------------" |
1155 |
echo |
echo |
1178 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
&& symlink_mpifiles $dir $code_dir $builddir \ |
1179 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
1180 |
&& makemodel $dir/$builddir && make=Y \ |
&& makemodel $dir/$builddir && make=Y \ |
1181 |
&& linkdata $dir/$rundir $input_dirs \ |
&& linkdata $dir/$rundir $inputdir input \ |
1182 |
&& runmodel $dir/$rundir && run=Y \ |
&& runmodel $dir/$rundir && run=Y \ |
1183 |
&& results=`testoutput_run $dir $rundir "txt"` |
&& results=`testoutput_run $dir $rundir $ref_outp` |
1184 |
fi |
fi |
1185 |
|
|
1186 |
echo |
echo |
|
if test "x$ADM" = x ; then |
|
1187 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1188 |
echo |
echo |
1189 |
# echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1190 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > / /' | sed 's/ < / /' >> $SUMMARY |
touch $CDIR"/summary.txt" |
|
touch $CDIR"/summary.txt" |
|
1191 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1192 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1193 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1194 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1195 |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1196 |
|
if test "x$ADM" = xt ; then |
1197 |
|
head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" |
1198 |
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
1199 |
|
>> $CDIR"/summary.txt" |
1200 |
|
fi |
1201 |
|
|
1202 |
for ex in $extra_runs ; do |
for ex in $extra_runs ; do |
1203 |
unset run |
unset run |
1204 |
results=$EMPTY_RESULTS |
results=$EMPTY_RESULTS |
1205 |
|
# reference output file |
1206 |
|
refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"` |
1207 |
# Create an output dir for each OPTFILE/tdir.ex combination |
# Create an output dir for each OPTFILE/tdir.ex combination |
1208 |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
rel_CDIR=$DRESULTS"/"$dir"."$ex |
1209 |
mkdir $rel_CDIR |
mkdir $rel_CDIR |
1210 |
CDIR=`pwd`"/$rel_CDIR" |
CDIR=`pwd`"/$rel_CDIR" |
1211 |
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
1212 |
run_clean $dir/tr_run.$ex |
run_clean $dir/tr_run.$ex |
1213 |
linkdata $dir/tr_run.$ex input.$ex input |
linkdata $dir/tr_run.$ex $inputdir.$ex $inputdir input |
1214 |
runmodel $dir/tr_run.$ex && run=Y \ |
runmodel $dir/tr_run.$ex && run=Y \ |
1215 |
&& results=`testoutput_run $dir tr_run.$ex ${ex}".txt"` |
&& results=`testoutput_run $dir tr_run.$ex $refExOut` |
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
|
1216 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1217 |
fres="$fres.$ex" |
fres="$fres.$ex" |
1218 |
echo |
echo |
1219 |
# echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1220 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > / /' | sed 's/ < / /' >> $SUMMARY |
touch $CDIR"/summary.txt" |
|
touch $CDIR"/summary.txt" |
|
1221 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1222 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1223 |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1224 |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1225 |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
1226 |
|
if test "x$ADM" = xt ; then |
1227 |
|
head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" |
1228 |
|
grep -A3 'Seconds in section "ALL' $dir/tr_run.$ex/$OUTPUTFILE \ |
1229 |
|
>> $CDIR"/summary.txt" |
1230 |
|
fi |
1231 |
if test "x$POSTCLEAN" = xt ; then |
if test "x$POSTCLEAN" = xt ; then |
1232 |
run_clean $dir/tr_run.$ex |
run_clean $dir/tr_run.$ex |
1233 |
fi |
fi |
1234 |
done |
done |
|
else |
|
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
|
|
fres=$fres"$results $dir" |
|
|
echo |
|
|
echo "$fres" >> $SUMMARY |
|
|
touch $CDIR"/summary.txt" |
|
|
echo "fresults='$fres'" >> $CDIR"/summary.txt" |
|
|
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
|
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
|
|
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
|
|
>> $CDIR"/summary.txt" |
|
|
fi |
|
1235 |
|
|
1236 |
#postclean $dir/$builddir |
#postclean $dir/$builddir |
1237 |
if test "x$POSTCLEAN" = xt ; then |
if test "x$POSTCLEAN" = xt ; then |
1278 |
rm -f tr_cmpnum.c tr_cmpnum |
rm -f tr_cmpnum.c tr_cmpnum |
1279 |
|
|
1280 |
if test "x$CLEANUP" != xt ; then |
if test "x$CLEANUP" != xt ; then |
1281 |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \.//' |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //' |
1282 |
if test -e tr_out.txt ; then |
if test -e tr_out.txt ; then |
1283 |
mv tr_out.txt tr_out.txt.old |
mv tr_out.txt tr_out.txt.old |
1284 |
fi |
fi |
1285 |
cat $SUMMARY | sed '11,$ s/ \.//g' > tr_out.txt |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt |
1286 |
fi |
fi |
1287 |
|
|
1288 |
if test "x$DELDIR" = xt ; then |
if test "x$DELDIR" = xt ; then |