1 |
edhill |
1.19 |
#! /usr/bin/env bash |
2 |
edhill |
1.1 |
# |
3 |
edhill |
1.49 |
# $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.48 2004/11/17 21:38:35 jmc Exp $ |
4 |
edhill |
1.12 |
# $Name: $ |
5 |
edhill |
1.1 |
# |
6 |
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7 |
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usage() |
8 |
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{ |
9 |
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echo |
10 |
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echo "Usage: $0 [OPTIONS]" |
11 |
|
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echo |
12 |
|
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echo "where possible OPTIONS are:" |
13 |
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echo " (-help|-h) print usage" |
14 |
edhill |
1.7 |
echo " (-mpi) use MPI input files" |
15 |
edhill |
1.10 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
16 |
edhill |
1.41 |
echo " (DEF=\"-ieee\")" |
17 |
edhill |
1.6 |
echo " (-optfile=|-of=)STRING list of optfiles to use" |
18 |
edhill |
1.20 |
echo " (-a|-addr) STRING list of email recipients" |
19 |
edhill |
1.6 |
echo " (DEF=\"edhill@mitgcm.org\")" |
20 |
edhill |
1.20 |
echo " (-t|-tdir) STRING list of test dirs to use" |
21 |
edhill |
1.6 |
echo " (DEF=\"\" which builds all)" |
22 |
edhill |
1.20 |
echo " (-b|-bash) STRING preferred location of a \"bash\" or" |
23 |
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echo " Bourne-compatible \"sh\" shell" |
24 |
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echo " (DEF=\"\" for \"bash\")" |
25 |
edhill |
1.24 |
echo " (-adm|-ad) perform an adjoint run" |
26 |
edhill |
1.20 |
echo " (-command) STRING command to run" |
27 |
edhill |
1.6 |
echo " (DEF=\"make output.txt\")" |
28 |
edhill |
1.20 |
echo " (-m|-make) STRING command to use for \"make\"" |
29 |
edhill |
1.8 |
echo " (DEF=\"make\")" |
30 |
edhill |
1.43 |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
31 |
edhill |
1.10 |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
32 |
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echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
33 |
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echo " (-nogenmake|-ng) skip the genmake stage" |
34 |
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echo " (-noclean|-nc) skip the \"make clean\" stage" |
35 |
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echo " (-nodepend|-nd) skip the \"make depend\" stage" |
36 |
edhill |
1.40 |
echo " (-deldir|-dd) on success, delete the output directory" |
37 |
edhill |
1.6 |
echo |
38 |
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echo "and where STRING follows a whitespace-delimited format" |
39 |
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echo "such as:" |
40 |
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echo " -t 'exp0 exp2 exp3' " |
41 |
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echo " -addr='abc@123.com testing@home.org'" |
42 |
edhill |
1.1 |
echo |
43 |
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exit 1 |
44 |
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} |
45 |
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46 |
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# build the mpack utility |
47 |
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build_mpack() |
48 |
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{ |
49 |
edhill |
1.34 |
printf "building the mpack utility... " |
50 |
edhill |
1.1 |
if test ! -x "$MPACKDIR/mpack" ; then |
51 |
|
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if test ! -d $MPACKDIR ; then |
52 |
edhill |
1.20 |
echo |
53 |
edhill |
1.1 |
echo "Error: can't find \"$MPACKDIR\"" |
54 |
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echo " are you sure this program is being run in the correct " |
55 |
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echo " (that is, \"MITGCM_ROOT\verification\") directory?" |
56 |
edhill |
1.20 |
echo |
57 |
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HAVE_MPACK=f |
58 |
edhill |
1.1 |
fi |
59 |
edhill |
1.34 |
printf "building mpack... " |
60 |
edhill |
1.26 |
if test "x$CC" = x ; then |
61 |
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export CC=cc |
62 |
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fi |
63 |
edhill |
1.25 |
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
64 |
edhill |
1.1 |
RETVAL=$? |
65 |
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if test "x$RETVAL" != x0 ; then |
66 |
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echo |
67 |
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echo "Error building the mpack tools at: $MPACK_DIR" |
68 |
edhill |
1.20 |
echo |
69 |
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HAVE_MPACK=f |
70 |
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else |
71 |
edhill |
1.25 |
rm -f tr_build_mpack.out |
72 |
edhill |
1.20 |
HAVE_MPACK=t |
73 |
edhill |
1.1 |
fi |
74 |
edhill |
1.20 |
else |
75 |
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HAVE_MPACK=t |
76 |
edhill |
1.1 |
fi |
77 |
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echo "OK" |
78 |
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} |
79 |
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80 |
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testoutput_for_prop() |
81 |
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{ |
82 |
edhill |
1.34 |
# testoutput_for_prop dir s1 label subdir extension |
83 |
edhill |
1.1 |
# |
84 |
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# compares files in $dir/$subdir/output.txt and $dir/results/output.txt |
85 |
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# using search strings s1 and text label |
86 |
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87 |
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if [ $debug -gt 0 ]; then |
88 |
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echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2 |
89 |
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fi |
90 |
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if [ -r $1/$4/output.txt ]; then |
91 |
edhill |
1.15 |
grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt |
92 |
edhill |
1.1 |
lncnt=`wc -l tmp1.txt | awk '{print $1}' ` |
93 |
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if [ $lncnt -lt 3 ]; then |
94 |
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if [ $verbose -gt 0 ]; then |
95 |
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echo Not enough lines of output when searching for "$2" 1>&2 |
96 |
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fi |
97 |
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return 99 |
98 |
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fi |
99 |
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else |
100 |
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echo testoutput_for_prop: output.txt from model run was not readable 1>&2 |
101 |
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return 99 |
102 |
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fi |
103 |
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if [ $debug -gt 0 ]; then |
104 |
edhill |
1.34 |
echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2 |
105 |
edhill |
1.1 |
fi |
106 |
edhill |
1.34 |
grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt |
107 |
edhill |
1.1 |
lncnt=`wc -l tmp2.txt | awk '{print $1}' ` |
108 |
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if [ $lncnt -lt 3 ]; then |
109 |
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if [ $verbose -gt 0 ]; then |
110 |
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echo Not enough lines of output when searching for "$2" 1>&2 |
111 |
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fi |
112 |
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return 99 |
113 |
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fi |
114 |
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if [ $debug -gt 0 ]; then |
115 |
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echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2 |
116 |
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fi |
117 |
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join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
118 |
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if [ $debug -gt 0 ]; then |
119 |
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echo testoutput_for_prop: compare_lines 1>&2 |
120 |
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fi |
121 |
edhill |
1.22 |
if [ $verbose -gt 1 ]; then |
122 |
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cat tmp3.txt 1>&2 |
123 |
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fi |
124 |
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echo "-1" >> tmp3.txt |
125 |
edhill |
1.23 |
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
126 |
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cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
127 |
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digits_of_similarity=`./tmp_cmpnum < tmp4.txt` |
128 |
edhill |
1.1 |
if [ $digits_of_similarity -eq 99 ]; then |
129 |
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if [ $verbose -gt 0 ]; then |
130 |
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echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2 |
131 |
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fi |
132 |
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digits_of_similarity=99 |
133 |
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else |
134 |
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if [ $verbose -gt 0 ]; then |
135 |
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echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2 |
136 |
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fi |
137 |
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fi |
138 |
edhill |
1.23 |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
139 |
edhill |
1.1 |
|
140 |
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return $digits_of_similarity |
141 |
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} |
142 |
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143 |
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dashnum() |
144 |
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{ |
145 |
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# dashnum n1 n2 n3 ... |
146 |
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# |
147 |
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# print numbers using %3i format or "--" if number = 99 |
148 |
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149 |
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for num in $@ ; do |
150 |
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if [ $num = 99 ]; then |
151 |
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printf ' --' |
152 |
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else |
153 |
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printf '%3i' $num |
154 |
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fi |
155 |
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done |
156 |
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} |
157 |
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158 |
edhill |
1.24 |
testoutput_ad() |
159 |
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{ |
160 |
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grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt |
161 |
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grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt |
162 |
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grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt |
163 |
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grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt |
164 |
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join t05.txt t15.txt > t5.txt |
165 |
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join t06.txt t16.txt > t6.txt |
166 |
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echo "-1" >> t5.txt |
167 |
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echo "-1" >> t6.txt |
168 |
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digits_5=`./tmp_cmpnum < t5.txt` |
169 |
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digits_6=`./tmp_cmpnum < t6.txt` |
170 |
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dashnum $digits_5 $digits_6 |
171 |
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rm -f t[01][56].txt t[56].txt |
172 |
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} |
173 |
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174 |
edhill |
1.49 |
check_for_add_mon_output() |
175 |
|
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{ |
176 |
|
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# Check for additional types of monitor output |
177 |
|
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if test "x$1" = x ; then |
178 |
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return |
179 |
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fi |
180 |
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181 |
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ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
182 |
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ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
183 |
|
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for ii in 1 2 3 4 5 ; do |
184 |
|
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for jj in $ptr_add ; do |
185 |
|
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name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
186 |
|
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tst=`grep $name $1 | wc -l | awk '{print $1}'` |
187 |
|
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if test ! "x$tst" = x0 ; then |
188 |
|
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eval "HAVE_PTR0"$ii"=t" |
189 |
|
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fi |
190 |
|
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done |
191 |
|
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# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' |
192 |
|
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done |
193 |
|
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} |
194 |
|
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|
195 |
edhill |
1.1 |
testoutput() |
196 |
|
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{ |
197 |
edhill |
1.34 |
# testoutput directory subdir extension |
198 |
edhill |
1.1 |
# |
199 |
|
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# test output in "directory" |
200 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
201 |
|
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if [ $debug -gt 0 ]; then |
202 |
|
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echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2 |
203 |
|
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fi |
204 |
edhill |
1.34 |
testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$? |
205 |
edhill |
1.24 |
if [ $debug -gt 0 ]; then |
206 |
|
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echo testoutput: cg2dres=$cg2dres 1>&2 |
207 |
|
|
fi |
208 |
edhill |
1.34 |
testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$? |
209 |
|
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testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$? |
210 |
|
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testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$? |
211 |
|
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testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$? |
212 |
|
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testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$? |
213 |
|
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testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$? |
214 |
|
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testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$? |
215 |
|
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testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$? |
216 |
|
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testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$? |
217 |
|
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testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$? |
218 |
|
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testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$? |
219 |
|
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testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$? |
220 |
|
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testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$? |
221 |
|
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testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$? |
222 |
|
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testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$? |
223 |
|
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testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$? |
224 |
edhill |
1.49 |
|
225 |
|
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for ii in 1 2 3 4 5 ; do |
226 |
|
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testoutput_for_prop $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3 |
227 |
|
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RETVAL=$? ; eval `echo "p0"$ii"_min="$RETVAL` |
228 |
|
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testoutput_for_prop $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3 |
229 |
|
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RETVAL=$? ; eval `echo "p0"$ii"_max="$RETVAL` |
230 |
|
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testoutput_for_prop $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3 |
231 |
|
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RETVAL=$? ; eval `echo "p0"$ii"_mean="$RETVAL` |
232 |
|
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testoutput_for_prop $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_sd" $2 $3 |
233 |
|
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RETVAL=$? ; eval `echo "p0"$ii"_sd="$RETVAL` |
234 |
|
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done |
235 |
|
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|
236 |
|
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allargs="$cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd" |
237 |
|
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allargs="$allargs $umin $umax $umean $usd $vmin $vmax $vmean $vsd" |
238 |
|
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allargs="$allargs $p01_min $p01_max $p01_mean $p01_sd" |
239 |
|
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allargs="$allargs $p02_min $p02_max $p02_mean $p02_sd" |
240 |
|
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allargs="$allargs $p03_min $p03_max $p03_mean $p03_sd" |
241 |
|
|
allargs="$allargs $p04_min $p04_max $p04_mean $p04_sd" |
242 |
|
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allargs="$allargs $p05_min $p05_max $p05_mean $p05_sd" |
243 |
|
|
|
244 |
|
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eval "dashnum $allargs" |
245 |
|
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|
246 |
edhill |
1.24 |
else |
247 |
|
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testoutput_ad $1 $2 "precision_grdchk_result" |
248 |
edhill |
1.1 |
fi |
249 |
|
|
} |
250 |
|
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|
251 |
|
|
genmakemodel() |
252 |
|
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{ |
253 |
|
|
# genmakemodel directory |
254 |
edhill |
1.10 |
if test "x$NOGENMAKE" = xt ; then |
255 |
|
|
echo "genmake skipped!" |
256 |
|
|
else |
257 |
edhill |
1.34 |
if test "x$BASH" = x ; then |
258 |
|
|
GENMAKE2="../../../tools/genmake2" |
259 |
|
|
else |
260 |
|
|
GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH" |
261 |
|
|
fi |
262 |
edhill |
1.10 |
( |
263 |
|
|
cd $1; |
264 |
edhill |
1.24 |
command="$GENMAKE2 -ds -m $MAKE" |
265 |
|
|
if test "x$ADM" = x ; then |
266 |
|
|
command="$command --mods=../code" |
267 |
|
|
else |
268 |
|
|
command="$command --mods=../code_ad" |
269 |
|
|
command="$command -adof=../../../tools/adjoint_options/adjoint_staf" |
270 |
|
|
fi |
271 |
edhill |
1.10 |
if test "x$OPTFILE" != xNONE ; then |
272 |
|
|
command="$command --optfile=$OPTFILE" |
273 |
|
|
fi |
274 |
|
|
if test "x$IEEE" != x ; then |
275 |
|
|
command="$command -ieee" |
276 |
|
|
fi |
277 |
|
|
printf 'genmake ... ' 1>&2 |
278 |
|
|
$command > make.log 2>&1 |
279 |
|
|
RETVAL=$? |
280 |
edhill |
1.44 |
# Reduce the size of the testing emails! |
281 |
edhill |
1.47 |
head -100 Makefile > $CDIR/Makefile_head |
282 |
edhill |
1.10 |
if test "x$RETVAL" != x0 ; then |
283 |
|
|
tail make.log |
284 |
|
|
echo "genmakemodel: genmake failed" 1>&2 |
285 |
edhill |
1.21 |
cp genmake_* make.log $CDIR |
286 |
edhill |
1.10 |
return 1 |
287 |
|
|
else |
288 |
edhill |
1.20 |
echo "successful" 1>&2 |
289 |
edhill |
1.1 |
fi |
290 |
edhill |
1.10 |
) |
291 |
|
|
fi |
292 |
edhill |
1.1 |
} |
293 |
|
|
|
294 |
|
|
makeclean() |
295 |
|
|
{ |
296 |
|
|
# makeclean directory |
297 |
edhill |
1.10 |
if test "x$NOCLEAN" = xt ; then |
298 |
|
|
echo "make CLEAN skipped!" |
299 |
|
|
else |
300 |
|
|
( |
301 |
|
|
cd $1; |
302 |
|
|
if test -e output.txt ; then |
303 |
|
|
rm -f output.txt |
304 |
|
|
fi |
305 |
|
|
printf 'make CLEAN ... ' 2>&1 |
306 |
|
|
if test -r Makefile ; then |
307 |
|
|
$MAKE CLEAN >> make.log 2>&1 |
308 |
|
|
RETVAL=$? |
309 |
|
|
if test "x$RETVAL" != x0 ; then |
310 |
|
|
tail make.log |
311 |
|
|
echo "makeclean: \"make CLEAN\" failed" 1>&2 |
312 |
|
|
cp make.log $CDIR"/make.log" |
313 |
|
|
return 1 |
314 |
|
|
fi |
315 |
|
|
fi |
316 |
edhill |
1.20 |
echo successful 1>&2 |
317 |
edhill |
1.10 |
exit 0 |
318 |
|
|
) |
319 |
|
|
fi |
320 |
|
|
} |
321 |
|
|
|
322 |
|
|
makedependmodel() |
323 |
|
|
{ |
324 |
|
|
# makedependmodel directory |
325 |
|
|
if test "x$NODEPEND" = xt ; then |
326 |
|
|
echo "make depend skipped!" |
327 |
|
|
else |
328 |
|
|
( |
329 |
|
|
cd $1; |
330 |
|
|
printf 'make depend ... ' 1>&2 |
331 |
|
|
$MAKE depend >> make.log 2>&1 |
332 |
edhill |
1.1 |
RETVAL=$? |
333 |
|
|
if test "x$RETVAL" != x0 ; then |
334 |
|
|
tail make.log |
335 |
edhill |
1.10 |
echo "makedependmodel: make depend failed" 1>&2 |
336 |
edhill |
1.1 |
cp make.log $CDIR"/make.log" |
337 |
|
|
return 1 |
338 |
edhill |
1.10 |
else |
339 |
edhill |
1.20 |
echo successful 1>&2 |
340 |
edhill |
1.1 |
fi |
341 |
edhill |
1.10 |
) |
342 |
|
|
fi |
343 |
edhill |
1.1 |
} |
344 |
|
|
|
345 |
|
|
makemodel() |
346 |
|
|
{ |
347 |
|
|
# makemodel directory |
348 |
|
|
( |
349 |
|
|
cd $1; |
350 |
|
|
if test -r Makefile ; then |
351 |
|
|
printf 'make ... ' 1>&2 |
352 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
353 |
edhill |
1.43 |
if test "x$JOBS" = x ; then |
354 |
|
|
$MAKE >> make.log 2>&1 |
355 |
|
|
else |
356 |
|
|
$MAKE -j $JOBS >> make.log 2>&1 |
357 |
|
|
fi |
358 |
edhill |
1.24 |
else |
359 |
|
|
$MAKE adall >> make.log 2>&1 |
360 |
|
|
fi |
361 |
edhill |
1.1 |
RETVAL=$? |
362 |
|
|
if test "x$RETVAL" != x0 ; then |
363 |
|
|
tail make.log |
364 |
|
|
echo failed 1>&2 |
365 |
|
|
cp make.log $CDIR"/make.log" |
366 |
|
|
return 1 |
367 |
|
|
else |
368 |
edhill |
1.20 |
echo successful 1>&2 |
369 |
edhill |
1.1 |
fi |
370 |
|
|
fi |
371 |
|
|
) |
372 |
|
|
} |
373 |
|
|
|
374 |
edhill |
1.27 |
symlink_mpifiles() |
375 |
|
|
{ |
376 |
|
|
# Put special links so that MPI specific files are used |
377 |
|
|
# This MUST be invoked between makeclean and makelinks because |
378 |
|
|
# the Makefile will link to non-mpi files by default |
379 |
|
|
|
380 |
|
|
dir=$1 |
381 |
|
|
code_dir=$2 |
382 |
|
|
BUILD_DIR=$dir/$3 |
383 |
|
|
CODE_DIR=$dir/$code_dir |
384 |
edhill |
1.45 |
|
385 |
edhill |
1.27 |
# These are files that should replace their counter-part when using -mpi |
386 |
|
|
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
387 |
|
|
|
388 |
|
|
# Is this an MPI run? |
389 |
|
|
if test "x$MPI" = xt ; then |
390 |
|
|
# YES: We symbolically link these files to the build |
391 |
|
|
# dir so long as there is no real file in place |
392 |
|
|
for ii in $MPI_FILES ; do |
393 |
|
|
i=`echo $ii | sed 's:^\./::'` |
394 |
|
|
name=`echo $i | sed 's:_mpi::' ` |
395 |
|
|
cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1 |
396 |
|
|
RETVAL=$? |
397 |
|
|
if test "x$RETVAL" != x0 ; then |
398 |
|
|
if ! test -f $BUILD_DIR/$i ; then |
399 |
edhill |
1.45 |
#echo Linking $name to $i |
400 |
edhill |
1.27 |
(cd $BUILD_DIR; ln -sf ../$code_dir/$i $name) |
401 |
|
|
fi |
402 |
|
|
fi |
403 |
|
|
done |
404 |
|
|
else |
405 |
edhill |
1.45 |
# NO: We undo any _mpi symbolically linked files |
406 |
edhill |
1.27 |
for ii in $MPI_FILES ; do |
407 |
|
|
i=`echo $ii | sed 's:^\./::'` |
408 |
|
|
name=`echo $i | sed 's:_mpi::' ` |
409 |
|
|
if test -L $BUILD_DIR/$name ; then |
410 |
edhill |
1.45 |
cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1 |
411 |
|
|
RETVAL=$? |
412 |
|
|
if test "x$RETVAL" = x0 ; then |
413 |
|
|
#echo Un-linking $name from $linktarg |
414 |
edhill |
1.27 |
rm -f $BUILD_DIR/$name |
415 |
|
|
fi |
416 |
|
|
fi |
417 |
|
|
done |
418 |
|
|
fi |
419 |
|
|
|
420 |
|
|
} |
421 |
|
|
|
422 |
edhill |
1.1 |
linkdata() |
423 |
|
|
{ |
424 |
|
|
# linkdata flag |
425 |
|
|
# |
426 |
|
|
# symbolically link data files to run directory |
427 |
edhill |
1.12 |
if test "x$1" = x1 ; then |
428 |
|
|
( |
429 |
|
|
cd $2 |
430 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
431 |
|
|
files=`( cd ../input ; ls -1 | grep -v CVS )` |
432 |
|
|
for i in $files ; do |
433 |
|
|
if test ! -d "../input/"$i ; then |
434 |
|
|
ln -sf "../input/"$i $i |
435 |
|
|
fi |
436 |
|
|
done |
437 |
|
|
else |
438 |
|
|
files=`( cd ../input ; ls -1 *.bin | grep -v CVS )` |
439 |
|
|
for i in $files ; do |
440 |
|
|
if test ! -d "../input/"$i ; then |
441 |
|
|
ln -sf "../input/"$i $i |
442 |
|
|
fi |
443 |
|
|
done |
444 |
|
|
files=`( cd ../input_ad ; ls -1 | grep -v CVS )` |
445 |
|
|
for i in $files ; do |
446 |
|
|
if test ! -d "../input_ad/"$i ; then |
447 |
|
|
ln -sf "../input_ad/"$i $i |
448 |
|
|
fi |
449 |
|
|
done |
450 |
|
|
fi |
451 |
edhill |
1.12 |
) |
452 |
edhill |
1.1 |
fi |
453 |
|
|
} |
454 |
|
|
|
455 |
|
|
runmodel() |
456 |
|
|
{ |
457 |
edhill |
1.6 |
# runmodel directory |
458 |
edhill |
1.1 |
# |
459 |
edhill |
1.24 |
# runs "$COMMAND in "directory" |
460 |
edhill |
1.6 |
# (where "$COMMAND" is relative to "directory") |
461 |
edhill |
1.1 |
( |
462 |
|
|
cd $1 |
463 |
edhill |
1.20 |
printf 'runmodel ... ' 1>&2 |
464 |
edhill |
1.6 |
# make output.txt |
465 |
edhill |
1.38 |
echo |
466 |
jmc |
1.46 |
rm -f run.log |
467 |
edhill |
1.39 |
# echo "COMMAND='$COMMAND'" |
468 |
|
|
# echo "pwd='"`pwd`"'" |
469 |
jmc |
1.46 |
( eval $COMMAND ) > run.log 2>&1 |
470 |
edhill |
1.6 |
RETVAL=$? |
471 |
|
|
if test "x$RETVAL" = x0 ; then |
472 |
jmc |
1.46 |
tail run.log |
473 |
edhill |
1.20 |
echo successful 1>&2 |
474 |
edhill |
1.44 |
# === Reduce the size of the testing emails! |
475 |
|
|
# if test "x$ADM" = x ; then |
476 |
|
|
# cp output.txt $CDIR"/output.txt" |
477 |
|
|
# else |
478 |
|
|
# cp output.txt_adm $CDIR"/output.txt_adm" |
479 |
|
|
# fi |
480 |
jmc |
1.48 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
481 |
edhill |
1.6 |
return 0 |
482 |
|
|
else |
483 |
edhill |
1.20 |
tail run.log |
484 |
|
|
echo failed 1>&2 |
485 |
|
|
cp run.log $CDIR"/run.log" |
486 |
jmc |
1.48 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
487 |
edhill |
1.6 |
return 1 |
488 |
edhill |
1.1 |
fi |
489 |
|
|
) |
490 |
|
|
} |
491 |
|
|
|
492 |
|
|
createcodelet() |
493 |
|
|
{ |
494 |
|
|
# create codelet for comparing model output |
495 |
|
|
|
496 |
edhill |
1.34 |
printf "creating the comparison code... " |
497 |
edhill |
1.22 |
cat > tmp_cmpnum.c <<EOF |
498 |
|
|
#include <stdio.h> |
499 |
|
|
#include <math.h> |
500 |
|
|
int main( int argc, char** argv ) { |
501 |
adcroft |
1.33 |
int linnum,best,lncnt; |
502 |
edhill |
1.22 |
double a,b,diff; |
503 |
|
|
best = -16; |
504 |
adcroft |
1.33 |
lncnt = 0; |
505 |
|
|
while( 1 & (lncnt+=1) < 999 ) { |
506 |
edhill |
1.22 |
scanf("%d", &linnum); |
507 |
|
|
if (linnum == -1) break; |
508 |
|
|
scanf("%lf", &a); scanf("%lf", &b); |
509 |
|
|
diff = 0.5*(fabs(a)+fabs(b)); |
510 |
|
|
if (diff > 1.e-12) { |
511 |
|
|
diff=fabs(a-b)/diff; |
512 |
|
|
if (diff > 0.0) { |
513 |
|
|
linnum = (int)log10(diff); |
514 |
|
|
best = (best > linnum) ? best : linnum; |
515 |
|
|
} |
516 |
|
|
else { |
517 |
|
|
if (best == -16 && diff != 0) best = -22; |
518 |
|
|
} |
519 |
|
|
} |
520 |
|
|
} |
521 |
adcroft |
1.33 |
if (lncnt == 999) best=-29; |
522 |
edhill |
1.22 |
printf("%d\n", -best); |
523 |
|
|
return 0; |
524 |
|
|
} |
525 |
|
|
EOF |
526 |
|
|
cc -o tmp_cmpnum tmp_cmpnum.c -lm |
527 |
edhill |
1.1 |
|
528 |
edhill |
1.22 |
if [ -x ./tmp_cmpnum ]; then |
529 |
edhill |
1.1 |
echo "OK" |
530 |
|
|
return 0 |
531 |
|
|
else |
532 |
|
|
echo |
533 |
edhill |
1.21 |
echo "ERROR: failed to compile comparison code" |
534 |
edhill |
1.1 |
exit 1 |
535 |
|
|
fi |
536 |
|
|
} |
537 |
|
|
|
538 |
|
|
formatresults() |
539 |
|
|
{ |
540 |
|
|
# formatresults expt genmake depend make run results* |
541 |
|
|
|
542 |
|
|
nm=$1 |
543 |
|
|
printf '%s %s %s %s' $2 $3 $4 $5 |
544 |
|
|
shift; shift; shift; shift; shift; |
545 |
|
|
printf '%3s' $@ |
546 |
|
|
|
547 |
|
|
if [ $1 = '--' ]; then |
548 |
|
|
printf ' N/O ' |
549 |
|
|
else |
550 |
|
|
if [ $1 -gt 12 ]; then |
551 |
|
|
printf ' pass' |
552 |
|
|
else |
553 |
|
|
printf ' FAIL' |
554 |
|
|
fi |
555 |
|
|
fi |
556 |
|
|
printf ' %s' $nm |
557 |
|
|
printf '\n' |
558 |
|
|
|
559 |
|
|
} |
560 |
|
|
|
561 |
|
|
show_help() |
562 |
|
|
{ |
563 |
|
|
cat - << EOF |
564 |
|
|
$0 [-help] [-quick] [-verbose] dir1 [dir2] [...] |
565 |
edhill |
1.10 |
|
566 |
|
|
-help|-h Show this help message |
567 |
edhill |
1.1 |
-quiet Reduce the amount of output |
568 |
|
|
-verbose Produce copious amounts of output |
569 |
|
|
-debug Produce even more output which will mean nothing to most |
570 |
|
|
-force Do "make CLEAN" before compiling. This forces a complete rebuild. |
571 |
|
|
-clean Do "make CLEAN" after compiling and testing. |
572 |
|
|
-cleanup Aggresively removes all model output, executables and object files |
573 |
|
|
and then exits. Use with care. |
574 |
|
|
|
575 |
|
|
Normal usage: |
576 |
|
|
$0 * Configure, compile, run and analyze in all experiment directories |
577 |
|
|
EOF |
578 |
|
|
} |
579 |
|
|
|
580 |
|
|
scandirs() |
581 |
|
|
{ |
582 |
|
|
if [ $# -eq 0 ]; then |
583 |
|
|
for arg in * ; do |
584 |
|
|
test -d $arg/input && echo $arg |
585 |
|
|
done |
586 |
|
|
else |
587 |
|
|
echo $* |
588 |
|
|
fi |
589 |
|
|
} |
590 |
|
|
|
591 |
|
|
|
592 |
|
|
############################################################################### |
593 |
|
|
|
594 |
|
|
|
595 |
|
|
# Default properties |
596 |
|
|
debug=0 |
597 |
|
|
verbose=1 |
598 |
|
|
clean=0 |
599 |
|
|
expts='' |
600 |
edhill |
1.6 |
# ieee=1 |
601 |
edhill |
1.10 |
|
602 |
edhill |
1.40 |
IEEE=true |
603 |
edhill |
1.10 |
if test "x$MITGCM_IEEE" != x ; then |
604 |
|
|
IEEE=$MITGCM_IEEE |
605 |
|
|
fi |
606 |
|
|
|
607 |
|
|
|
608 |
|
|
CLEANUP=f |
609 |
|
|
QUICK=f |
610 |
|
|
NOGENMAKE=f |
611 |
|
|
NOCLEAN=f |
612 |
|
|
NODEPEND=f |
613 |
edhill |
1.1 |
|
614 |
edhill |
1.4 |
BASH= |
615 |
edhill |
1.10 |
OPTFILE=NONE |
616 |
|
|
ADDRESSES= |
617 |
edhill |
1.1 |
TESTDIRS= |
618 |
|
|
MPACKDIR="../tools/mpack-1.6" |
619 |
edhill |
1.20 |
HAVE_MPACK= |
620 |
edhill |
1.1 |
MPACK="$MPACKDIR/mpack" |
621 |
edhill |
1.24 |
COMMAND= |
622 |
edhill |
1.8 |
MAKE=make |
623 |
edhill |
1.43 |
JOBS= |
624 |
edhill |
1.7 |
MPI=f |
625 |
edhill |
1.40 |
DELDIR= |
626 |
edhill |
1.1 |
|
627 |
edhill |
1.24 |
ADM= |
628 |
|
|
|
629 |
edhill |
1.49 |
# Additional monitor types |
630 |
|
|
# HAVE_PTR01= |
631 |
|
|
# HAVE_PTR02= |
632 |
|
|
# HAVE_PTR03= |
633 |
|
|
# HAVE_PTR04= |
634 |
|
|
# HAVE_PTR05= |
635 |
|
|
|
636 |
edhill |
1.34 |
printf "parsing options... " |
637 |
edhill |
1.1 |
|
638 |
|
|
ac_prev= |
639 |
|
|
for ac_option ; do |
640 |
|
|
|
641 |
|
|
# If the previous option needs an argument, assign it. |
642 |
|
|
if test -n "$ac_prev"; then |
643 |
|
|
eval "$ac_prev=\$ac_option" |
644 |
|
|
ac_prev= |
645 |
|
|
continue |
646 |
|
|
fi |
647 |
|
|
|
648 |
|
|
ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'` |
649 |
|
|
|
650 |
|
|
case $ac_option in |
651 |
|
|
|
652 |
|
|
-help | --help | -h | --h) |
653 |
|
|
usage ;; |
654 |
|
|
|
655 |
edhill |
1.2 |
-optfile | --optfile | -of | --of) |
656 |
edhill |
1.10 |
ac_prev=OPTFILE ;; |
657 |
edhill |
1.2 |
-optfile=* | --optfile=* | -of=* | --of=*) |
658 |
edhill |
1.10 |
OPTFILE=$ac_optarg ;; |
659 |
edhill |
1.1 |
|
660 |
|
|
-addr | --addr | -a | --a) |
661 |
|
|
ac_prev=ADDRESSES ;; |
662 |
|
|
-addr=* | --addr=*) |
663 |
|
|
ADDRESSES=$ac_optarg ;; |
664 |
|
|
|
665 |
|
|
-tdir | --tdir | -t | --t) |
666 |
|
|
ac_prev=TESTDIRS ;; |
667 |
|
|
-tdir=* | --tdir=*) |
668 |
|
|
TESTDIRS=$ac_optarg ;; |
669 |
edhill |
1.4 |
|
670 |
|
|
-bash | --bash | -b | --b) |
671 |
|
|
ac_prev=BASH ;; |
672 |
|
|
-bash=* | --bash=*) |
673 |
|
|
BASH=$ac_optarg ;; |
674 |
edhill |
1.5 |
|
675 |
edhill |
1.6 |
-command | --command | -c | --c) |
676 |
|
|
ac_prev=COMMAND ;; |
677 |
|
|
-command=* | --command=*) |
678 |
|
|
COMMAND=$ac_optarg ;; |
679 |
edhill |
1.8 |
|
680 |
|
|
-make | --make | -m | --m) |
681 |
|
|
ac_prev=MAKE ;; |
682 |
|
|
-make=* | --make=*) |
683 |
|
|
MAKE=$ac_optarg ;; |
684 |
edhill |
1.1 |
|
685 |
edhill |
1.43 |
-j) ac_prev=JOBS ;; |
686 |
|
|
-j=*) JOBS=$ac_optarg ;; |
687 |
|
|
|
688 |
edhill |
1.10 |
-clean | --clean) |
689 |
|
|
CLEANUP=t ;; |
690 |
|
|
|
691 |
|
|
-quick | --quick | -q | --q) |
692 |
|
|
QUICK=t ;; |
693 |
|
|
-nogenmake | --nogenmake | -ng | --ng) |
694 |
|
|
NOGENMAKE=t ;; |
695 |
|
|
-noclean | --noclean | -nc | --nc) |
696 |
|
|
NOCLEAN=t ;; |
697 |
|
|
-nodepend | --nodepend | -nd | --nd) |
698 |
|
|
NODEPEND=t ;; |
699 |
|
|
|
700 |
edhill |
1.18 |
-mpi) MPI=t ;; |
701 |
edhill |
1.10 |
|
702 |
edhill |
1.24 |
-adm | -ad) ADM=t ;; |
703 |
|
|
|
704 |
edhill |
1.10 |
-ieee) IEEE=true ;; |
705 |
|
|
-noieee) IEEE= ;; |
706 |
|
|
|
707 |
edhill |
1.1 |
-verbose) verbose=2 ;; |
708 |
|
|
-debug) debug=1 ;; |
709 |
|
|
-quiet) verbose=0 ;; |
710 |
|
|
|
711 |
edhill |
1.40 |
-deldir | -dd) DELDIR=t ;; |
712 |
|
|
|
713 |
edhill |
1.1 |
-*) |
714 |
|
|
echo "Error: unrecognized option: "$ac_option |
715 |
|
|
usage |
716 |
|
|
;; |
717 |
|
|
|
718 |
|
|
*) |
719 |
|
|
echo "Error: unrecognized argument: "$ac_option |
720 |
|
|
usage |
721 |
|
|
;; |
722 |
|
|
|
723 |
|
|
esac |
724 |
|
|
|
725 |
|
|
done |
726 |
|
|
|
727 |
edhill |
1.10 |
if test "x$QUICK" = xt ; then |
728 |
|
|
NOGENMAKE=t |
729 |
|
|
NOCLEAN=t |
730 |
|
|
NODEPEND=t |
731 |
|
|
fi |
732 |
|
|
|
733 |
edhill |
1.1 |
if test "x$TESTDIRS" = x ; then |
734 |
|
|
TESTDIRS=`scandirs` |
735 |
|
|
fi |
736 |
|
|
|
737 |
edhill |
1.10 |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
738 |
|
|
OPTFILE=$MITGCM_OF |
739 |
|
|
fi |
740 |
|
|
|
741 |
edhill |
1.24 |
if test "x$ADM" = xt -a "x$COMMAND" = x ; then |
742 |
|
|
COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1" |
743 |
|
|
fi |
744 |
|
|
|
745 |
|
|
if test "x$COMMAND" = x ; then |
746 |
edhill |
1.45 |
COMMAND="$MAKE output.txt" |
747 |
edhill |
1.24 |
fi |
748 |
|
|
|
749 |
edhill |
1.1 |
echo "OK" |
750 |
|
|
|
751 |
|
|
# create the FORTRAN comparison code |
752 |
|
|
createcodelet |
753 |
|
|
|
754 |
|
|
# build the mpack utility |
755 |
edhill |
1.31 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
756 |
edhill |
1.32 |
echo "skipping mpack build" |
757 |
|
|
else |
758 |
edhill |
1.31 |
build_mpack |
759 |
|
|
fi |
760 |
edhill |
1.1 |
|
761 |
|
|
# Create a uniquely named directory to store results |
762 |
|
|
MACH=`hostname` |
763 |
edhill |
1.2 |
UNAMEA=`uname -a` |
764 |
edhill |
1.1 |
DATE=`date +%Y%m%d` |
765 |
edhill |
1.25 |
BASE="tr_"$MACH"_"$DATE"_" |
766 |
edhill |
1.1 |
DNUM=0 |
767 |
|
|
DRESULTS="$BASE$DNUM" |
768 |
|
|
while test -e $DRESULTS ; do |
769 |
|
|
DNUM=$(( $DNUM + 1 )) |
770 |
|
|
DRESULTS="$BASE$DNUM" |
771 |
|
|
done |
772 |
|
|
mkdir $DRESULTS |
773 |
|
|
RETVAL=$? |
774 |
|
|
if test "x$RETVAL" != x0 ; then |
775 |
edhill |
1.20 |
echo "ERROR: Can't create results directory \"./$DRESULTS\"" |
776 |
edhill |
1.1 |
exit 1 |
777 |
|
|
fi |
778 |
|
|
SUMMARY="$DRESULTS/summary.txt" |
779 |
edhill |
1.34 |
printf "Start time: " >> $SUMMARY |
780 |
edhill |
1.16 |
start_date=`date` |
781 |
edhill |
1.17 |
echo $start_date > $SUMMARY |
782 |
edhill |
1.1 |
|
783 |
edhill |
1.11 |
of_path= |
784 |
edhill |
1.10 |
if test "x$OPTFILE" != xNONE ; then |
785 |
|
|
if test -r $OPTFILE ; then |
786 |
edhill |
1.11 |
# get the path |
787 |
|
|
path=${OPTFILE%/*} |
788 |
|
|
if test "x$path" = x ; then |
789 |
|
|
of_path=`pwd` |
790 |
|
|
else |
791 |
|
|
of_path=`( cd $path > /dev/null 2>&1 ; pwd )` |
792 |
|
|
fi |
793 |
|
|
file=${OPTFILE##*/} |
794 |
|
|
OPTFILE=$of_path/$file |
795 |
edhill |
1.21 |
cp $OPTFILE $DRESULTS |
796 |
|
|
echo >> $SUMMARY |
797 |
|
|
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
798 |
edhill |
1.11 |
else |
799 |
edhill |
1.21 |
echo | tee $SUMMARY |
800 |
|
|
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY |
801 |
|
|
exit 1 |
802 |
edhill |
1.10 |
fi |
803 |
edhill |
1.21 |
else |
804 |
|
|
echo >> $SUMMARY |
805 |
|
|
echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY |
806 |
|
|
echo " so the genmake default will be used." >> $SUMMARY |
807 |
edhill |
1.10 |
fi |
808 |
|
|
echo |
809 |
|
|
echo >> $SUMMARY |
810 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
811 |
edhill |
1.49 |
line_0=" ----T----- ----S----- ----U----- ----V-----" |
812 |
|
|
line_1="G D M c m s m s m s m s" |
813 |
|
|
line_2="E p a R g m m e . m m e . m m e . m m e ." |
814 |
|
|
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
815 |
|
|
line_4="2 d e n d n x n . n x n . n x n . n x n ." |
816 |
|
|
for ii in 1 2 3 4 5 ; do |
817 |
|
|
# tst=`eval 'echo $HAVE_PTR0'$ii` |
818 |
|
|
# if test "x$tst" = xt ; then |
819 |
|
|
line_0="$line_0 --PTR 0"$ii"--" |
820 |
|
|
line_1="$line_1 m s" |
821 |
|
|
line_2="$line_2 m m e ." |
822 |
|
|
line_3="$line_3 i a a d" |
823 |
|
|
line_4="$line_4 n x n ." |
824 |
|
|
# fi |
825 |
|
|
done |
826 |
|
|
echo "$line_0" | tee -a $SUMMARY |
827 |
|
|
echo "$line_1" | tee -a $SUMMARY |
828 |
|
|
echo "$line_2" | tee -a $SUMMARY |
829 |
|
|
echo "$line_3" | tee -a $SUMMARY |
830 |
|
|
echo "$line_4" | tee -a $SUMMARY |
831 |
|
|
echo " " | tee -a $SUMMARY |
832 |
edhill |
1.24 |
else |
833 |
|
|
echo "ADJOINT=true" >> $SUMMARY |
834 |
|
|
echo >> $SUMMARY |
835 |
|
|
cat << EOF | tee -a $SUMMARY |
836 |
|
|
G D M C G |
837 |
|
|
E p a R o r |
838 |
|
|
N n k u s a |
839 |
|
|
2 d e n t d |
840 |
|
|
|
841 |
|
|
EOF |
842 |
|
|
fi |
843 |
edhill |
1.1 |
|
844 |
edhill |
1.10 |
# ...and each test directory... |
845 |
|
|
for dir in $TESTDIRS ; do |
846 |
|
|
|
847 |
|
|
# Cleanup only! |
848 |
|
|
if test "x$CLEANUP" = xt ; then |
849 |
|
|
if test -r $dir/build/Makefile ; then |
850 |
|
|
( cd $dir/build ; make CLEAN ) |
851 |
|
|
fi |
852 |
|
|
if test -r $dir/input/Makefile ; then |
853 |
|
|
( cd $dir/input ; make CLEAN ) |
854 |
|
|
fi |
855 |
|
|
continue |
856 |
edhill |
1.1 |
fi |
857 |
edhill |
1.3 |
|
858 |
edhill |
1.10 |
# Verify that the testdir exists and contains previous |
859 |
|
|
# results in the correct location--or skip this directory! |
860 |
edhill |
1.24 |
fout= |
861 |
|
|
if test "x$ADM" = x ; then |
862 |
|
|
fout=$dir"/results/output.txt" |
863 |
|
|
else |
864 |
|
|
fout=$dir"/results_ad/output.txt_adm" |
865 |
|
|
fi |
866 |
|
|
if test ! -r $fout ; then |
867 |
|
|
echo "can't read \"$fout\" -- skipping $dir" |
868 |
edhill |
1.10 |
continue |
869 |
|
|
fi |
870 |
edhill |
1.7 |
|
871 |
edhill |
1.49 |
# Check for additional types of monitor output |
872 |
|
|
check_for_add_mon_output $fout |
873 |
|
|
|
874 |
edhill |
1.12 |
builddir="input" |
875 |
|
|
rundir="input" |
876 |
|
|
use_seperate_build=0 |
877 |
|
|
if test -d $dir/build -a -r $dir/build ; then |
878 |
|
|
builddir="build" |
879 |
|
|
rundir="build" |
880 |
|
|
use_seperate_build=1 |
881 |
|
|
linkdata $use_seperate_build $dir/$rundir |
882 |
edhill |
1.10 |
fi |
883 |
|
|
|
884 |
edhill |
1.34 |
# Check whether there are "extra runs" for this testdir |
885 |
|
|
extra_runs= |
886 |
|
|
if test "x$ADM" = x -a "x$use_seperate_build" = x1 ; then |
887 |
|
|
ex_run_dirs=`( cd $dir ; echo input.* )` |
888 |
|
|
echo "ex_run_dirs='$ex_run_dirs'" |
889 |
|
|
for exd in $ex_run_dirs ; do |
890 |
|
|
name=`echo $exd | sed -e 's/input.//g'` |
891 |
|
|
outf="$dir/results/output.txt.$name" |
892 |
|
|
if test -f $outf -a -r $outf ; then |
893 |
|
|
extra_runs="$extra_runs $name" |
894 |
|
|
fi |
895 |
|
|
done |
896 |
|
|
fi |
897 |
|
|
|
898 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
899 |
edhill |
1.27 |
code_dir=code |
900 |
edhill |
1.24 |
CODE_DIR=$dir/code |
901 |
|
|
else |
902 |
edhill |
1.27 |
code_dir=code_ad |
903 |
edhill |
1.24 |
CODE_DIR=$dir/code_ad |
904 |
|
|
fi |
905 |
edhill |
1.10 |
BUILD_DIR=$dir/$builddir |
906 |
edhill |
1.28 |
|
907 |
edhill |
1.30 |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
908 |
edhill |
1.28 |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
909 |
|
|
continue |
910 |
|
|
fi |
911 |
|
|
|
912 |
|
|
echo "-------------------------------------------------------------------------------" |
913 |
|
|
echo |
914 |
|
|
echo "Experiment: $dir" |
915 |
|
|
echo |
916 |
|
|
unset genmake makedepend make run |
917 |
|
|
results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --' |
918 |
edhill |
1.10 |
|
919 |
|
|
# Create an output dir for each OPTFILE/tdir combination |
920 |
edhill |
1.20 |
rel_CDIR=$DRESULTS"/"$dir |
921 |
|
|
mkdir $rel_CDIR |
922 |
|
|
CDIR=`pwd`"/$rel_CDIR" |
923 |
edhill |
1.10 |
|
924 |
|
|
if test "x$CLEANUP" = xt ; then |
925 |
|
|
makeclean $dir/$builddir |
926 |
|
|
else |
927 |
edhill |
1.1 |
genmakemodel $dir/$builddir && genmake=Y \ |
928 |
|
|
&& makeclean $dir/$builddir \ |
929 |
edhill |
1.27 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
930 |
edhill |
1.1 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
931 |
|
|
&& makemodel $dir/$builddir && make=Y \ |
932 |
edhill |
1.12 |
&& linkdata $use_seperate_build $dir/$rundir \ |
933 |
|
|
&& runmodel $dir/$rundir && run=Y \ |
934 |
edhill |
1.1 |
&& results=`testoutput $dir $rundir` |
935 |
edhill |
1.10 |
fi |
936 |
|
|
|
937 |
|
|
echo |
938 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
939 |
|
|
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
940 |
edhill |
1.34 |
echo |
941 |
|
|
echo "$fres" >> $SUMMARY |
942 |
|
|
echo "fresults='$fres'" > $CDIR"/summary.txt" |
943 |
|
|
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
944 |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
945 |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
946 |
|
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
947 |
|
|
|
948 |
edhill |
1.35 |
OLD_COMMAND=$COMMAND |
949 |
|
|
COMMAND="./mitgcmuv > output.txt" |
950 |
edhill |
1.34 |
for ex in $extra_runs ; do |
951 |
jmc |
1.42 |
test -e "$dir/tr_run.$ex" && rm -rf "$dir/tr_run.$ex" |
952 |
|
|
mkdir "$dir/tr_run.$ex" |
953 |
edhill |
1.36 |
links=`( cd "$dir/input" > /dev/null 2>&1 ; ls -1 | grep -v CVS )` |
954 |
edhill |
1.34 |
( |
955 |
jmc |
1.42 |
cd "$dir/tr_run.$ex" |
956 |
edhill |
1.34 |
for i in $links; do |
957 |
|
|
ln -s ../input/$i $i |
958 |
|
|
done |
959 |
|
|
) |
960 |
edhill |
1.36 |
links=`( cd "$dir/input.$ex" > /dev/null 2>&1 ; ls -1 | grep -v CVS )` |
961 |
edhill |
1.34 |
( |
962 |
jmc |
1.42 |
cd "$dir/tr_run.$ex" |
963 |
edhill |
1.34 |
for i in $links; do |
964 |
|
|
test -e $i && rm -f $i |
965 |
|
|
ln -s ../input.$ex/$i $i |
966 |
|
|
done |
967 |
|
|
ln -s ../$builddir/mitgcmuv mitgcmuv |
968 |
|
|
) |
969 |
jmc |
1.42 |
runmodel $dir/tr_run.$ex && run=Y \ |
970 |
|
|
&& results=`testoutput $dir tr_run.$ex "."$ex` |
971 |
edhill |
1.34 |
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
972 |
|
|
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
973 |
|
|
fres="$fres.$ex" |
974 |
|
|
echo |
975 |
|
|
echo "$fres" >> $SUMMARY |
976 |
|
|
echo "fresults='$fres'" > $CDIR"/summary.txt" |
977 |
|
|
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
978 |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
979 |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
980 |
|
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
981 |
|
|
done |
982 |
edhill |
1.35 |
COMMAND=$OLD_COMMAND |
983 |
edhill |
1.24 |
else |
984 |
|
|
fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}` |
985 |
|
|
fres=$fres"$results $dir" |
986 |
edhill |
1.34 |
echo |
987 |
|
|
echo "$fres" >> $SUMMARY |
988 |
|
|
echo "fresults='$fres'" > $CDIR"/summary.txt" |
989 |
|
|
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
990 |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
991 |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
992 |
|
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
993 |
edhill |
1.24 |
fi |
994 |
edhill |
1.10 |
|
995 |
|
|
echo "-------------------------------------------------------------------------------" |
996 |
|
|
|
997 |
edhill |
1.1 |
done |
998 |
|
|
|
999 |
edhill |
1.34 |
printf "Start time: " >> $SUMMARY |
1000 |
edhill |
1.16 |
echo $start_date >> $SUMMARY |
1001 |
edhill |
1.34 |
printf "End time: " >> $SUMMARY |
1002 |
edhill |
1.13 |
date >> $SUMMARY |
1003 |
edhill |
1.20 |
|
1004 |
|
|
# If addresses were supplied and mpack built successfully, then try |
1005 |
|
|
# to send email using mpack. |
1006 |
|
|
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
1007 |
|
|
echo "No results email was sent." |
1008 |
|
|
else |
1009 |
|
|
if test "x$HAVE_MPACK" = xt ; then |
1010 |
|
|
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
1011 |
|
|
&& gzip $DRESULTS".tar" \ |
1012 |
edhill |
1.44 |
&& $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES |
1013 |
edhill |
1.20 |
RETVAL=$? |
1014 |
|
|
if test "x$RETVAL" != x0 ; then |
1015 |
|
|
echo |
1016 |
|
|
echo "Warning: The tar, gzip, & mpack step failed. Please send email" |
1017 |
|
|
echo " to <MITgcm-support@mitgcm.org> for help. You may copy the " |
1018 |
|
|
echo " summary of results from the directory \"$DRESULTS\"." |
1019 |
|
|
echo |
1020 |
|
|
else |
1021 |
|
|
echo |
1022 |
|
|
echo "An email containing results was sent to the following addresses:" |
1023 |
|
|
echo " \"$ADDRESSES\"" |
1024 |
|
|
echo |
1025 |
|
|
fi |
1026 |
|
|
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
1027 |
|
|
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
1028 |
|
|
fi |
1029 |
|
|
fi |
1030 |
edhill |
1.13 |
|
1031 |
edhill |
1.22 |
# rm -f tmp_cmpnum.f a.out |
1032 |
|
|
rm -f tmp_cmpnum.c tmp_cmpnum |
1033 |
edhill |
1.1 |
|
1034 |
edhill |
1.12 |
if test "x$CLEANUP" != xt ; then |
1035 |
|
|
cat $SUMMARY |
1036 |
edhill |
1.25 |
if test -e tr_out.txt ; then |
1037 |
|
|
mv tr_out.txt tr_out.txt.old |
1038 |
edhill |
1.14 |
fi |
1039 |
edhill |
1.25 |
cat $SUMMARY > tr_out.txt |
1040 |
edhill |
1.12 |
fi |
1041 |
edhill |
1.1 |
|
1042 |
edhill |
1.40 |
if test "x$DELDIR" = xt ; then |
1043 |
|
|
rm -rf $DRESULTS |
1044 |
|
|
fi |
1045 |
|
|
|