/[MITgcm]/MITgcm/verification/testreport
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Revision 1.43 - (hide annotations) (download)
Thu Jul 8 20:58:24 2004 UTC (19 years, 8 months ago) by edhill
Branch: MAIN
CVS Tags: checkpoint54b_post
Changes since 1.42: +11 -2 lines
 o add testreport "-j JOBS" for parallel builds -- gives impressive
   speedup on Altix, Opteron, and other SMP machines

1 edhill 1.19 #! /usr/bin/env bash
2 edhill 1.1 #
3 edhill 1.43 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.42 2004/07/08 15:47:19 jmc Exp $
4 edhill 1.12 # $Name: $
5 edhill 1.1 #
6    
7     usage()
8     {
9     echo
10     echo "Usage: $0 [OPTIONS]"
11     echo
12     echo "where possible OPTIONS are:"
13     echo " (-help|-h) print usage"
14 edhill 1.7 echo " (-mpi) use MPI input files"
15 edhill 1.10 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
16 edhill 1.41 echo " (DEF=\"-ieee\")"
17 edhill 1.6 echo " (-optfile=|-of=)STRING list of optfiles to use"
18 edhill 1.20 echo " (-a|-addr) STRING list of email recipients"
19 edhill 1.6 echo " (DEF=\"edhill@mitgcm.org\")"
20 edhill 1.20 echo " (-t|-tdir) STRING list of test dirs to use"
21 edhill 1.6 echo " (DEF=\"\" which builds all)"
22 edhill 1.20 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
23     echo " Bourne-compatible \"sh\" shell"
24     echo " (DEF=\"\" for \"bash\")"
25 edhill 1.24 echo " (-adm|-ad) perform an adjoint run"
26 edhill 1.20 echo " (-command) STRING command to run"
27 edhill 1.6 echo " (DEF=\"make output.txt\")"
28 edhill 1.20 echo " (-m|-make) STRING command to use for \"make\""
29 edhill 1.8 echo " (DEF=\"make\")"
30 edhill 1.43 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
31 edhill 1.10 echo " (-clean) *ONLY* run \"make CLEAN\""
32     echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
33     echo " (-nogenmake|-ng) skip the genmake stage"
34     echo " (-noclean|-nc) skip the \"make clean\" stage"
35     echo " (-nodepend|-nd) skip the \"make depend\" stage"
36 edhill 1.40 echo " (-deldir|-dd) on success, delete the output directory"
37 edhill 1.6 echo
38     echo "and where STRING follows a whitespace-delimited format"
39     echo "such as:"
40     echo " -t 'exp0 exp2 exp3' "
41     echo " -addr='abc@123.com testing@home.org'"
42 edhill 1.1 echo
43     exit 1
44     }
45    
46     # build the mpack utility
47     build_mpack()
48     {
49 edhill 1.34 printf "building the mpack utility... "
50 edhill 1.1 if test ! -x "$MPACKDIR/mpack" ; then
51     if test ! -d $MPACKDIR ; then
52 edhill 1.20 echo
53 edhill 1.1 echo "Error: can't find \"$MPACKDIR\""
54     echo " are you sure this program is being run in the correct "
55     echo " (that is, \"MITGCM_ROOT\verification\") directory?"
56 edhill 1.20 echo
57     HAVE_MPACK=f
58 edhill 1.1 fi
59 edhill 1.34 printf "building mpack... "
60 edhill 1.26 if test "x$CC" = x ; then
61     export CC=cc
62     fi
63 edhill 1.25 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
64 edhill 1.1 RETVAL=$?
65     if test "x$RETVAL" != x0 ; then
66     echo
67     echo "Error building the mpack tools at: $MPACK_DIR"
68 edhill 1.20 echo
69     HAVE_MPACK=f
70     else
71 edhill 1.25 rm -f tr_build_mpack.out
72 edhill 1.20 HAVE_MPACK=t
73 edhill 1.1 fi
74 edhill 1.20 else
75     HAVE_MPACK=t
76 edhill 1.1 fi
77     echo "OK"
78     }
79    
80     testoutput_for_prop()
81     {
82 edhill 1.34 # testoutput_for_prop dir s1 label subdir extension
83 edhill 1.1 #
84     # compares files in $dir/$subdir/output.txt and $dir/results/output.txt
85     # using search strings s1 and text label
86    
87     if [ $debug -gt 0 ]; then
88     echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2
89     fi
90     if [ -r $1/$4/output.txt ]; then
91 edhill 1.15 grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt
92 edhill 1.1 lncnt=`wc -l tmp1.txt | awk '{print $1}' `
93     if [ $lncnt -lt 3 ]; then
94     if [ $verbose -gt 0 ]; then
95     echo Not enough lines of output when searching for "$2" 1>&2
96     fi
97     return 99
98     fi
99     else
100     echo testoutput_for_prop: output.txt from model run was not readable 1>&2
101     return 99
102     fi
103     if [ $debug -gt 0 ]; then
104 edhill 1.34 echo testoutput_for_prop: grep "$2" $1/results/output.txt$5 1>&2
105 edhill 1.1 fi
106 edhill 1.34 grep "$2" $1/results/output.txt$5 | sed 's/.*=//' | cat -n > tmp2.txt
107 edhill 1.1 lncnt=`wc -l tmp2.txt | awk '{print $1}' `
108     if [ $lncnt -lt 3 ]; then
109     if [ $verbose -gt 0 ]; then
110     echo Not enough lines of output when searching for "$2" 1>&2
111     fi
112     return 99
113     fi
114     if [ $debug -gt 0 ]; then
115     echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2
116     fi
117     join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
118     if [ $debug -gt 0 ]; then
119     echo testoutput_for_prop: compare_lines 1>&2
120     fi
121 edhill 1.22 if [ $verbose -gt 1 ]; then
122     cat tmp3.txt 1>&2
123     fi
124     echo "-1" >> tmp3.txt
125 edhill 1.23 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
126     cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
127     digits_of_similarity=`./tmp_cmpnum < tmp4.txt`
128 edhill 1.1 if [ $digits_of_similarity -eq 99 ]; then
129     if [ $verbose -gt 0 ]; then
130     echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2
131     fi
132     digits_of_similarity=99
133     else
134     if [ $verbose -gt 0 ]; then
135     echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2
136     fi
137     fi
138 edhill 1.23 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
139 edhill 1.1
140     return $digits_of_similarity
141     }
142    
143     dashnum()
144     {
145     # dashnum n1 n2 n3 ...
146     #
147     # print numbers using %3i format or "--" if number = 99
148    
149     for num in $@ ; do
150     if [ $num = 99 ]; then
151     printf ' --'
152     else
153     printf '%3i' $num
154     fi
155     done
156     }
157    
158 edhill 1.24 testoutput_ad()
159     {
160     grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt
161     grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt
162     grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt
163     grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt
164     join t05.txt t15.txt > t5.txt
165     join t06.txt t16.txt > t6.txt
166     echo "-1" >> t5.txt
167     echo "-1" >> t6.txt
168     digits_5=`./tmp_cmpnum < t5.txt`
169     digits_6=`./tmp_cmpnum < t6.txt`
170     dashnum $digits_5 $digits_6
171     rm -f t[01][56].txt t[56].txt
172     }
173    
174 edhill 1.1 testoutput()
175     {
176 edhill 1.34 # testoutput directory subdir extension
177 edhill 1.1 #
178     # test output in "directory"
179 edhill 1.24 if test "x$ADM" = x ; then
180     if [ $debug -gt 0 ]; then
181     echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2
182     fi
183 edhill 1.34 testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2 $3; cg2dres=$?
184 edhill 1.24 if [ $debug -gt 0 ]; then
185     echo testoutput: cg2dres=$cg2dres 1>&2
186     fi
187 edhill 1.34 testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2 $3; tmin=$?
188     testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2 $3; tmax=$?
189     testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2 $3; tmean=$?
190     testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2 $3; tsd=$?
191     testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2 $3; smin=$?
192     testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2 $3; smax=$?
193     testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2 $3; smean=$?
194     testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2 $3; ssd=$?
195     testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2 $3; umin=$?
196     testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2 $3; umax=$?
197     testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2 $3; umean=$?
198     testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2 $3; usd=$?
199     testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2 $3; vmin=$?
200     testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2 $3; vmax=$?
201     testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2 $3; vmean=$?
202     testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2 $3; vsd=$?
203 edhill 1.24 dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \
204     $umin $umax $umean $usd $vmin $vmax $vmean $vsd
205     else
206     testoutput_ad $1 $2 "precision_grdchk_result"
207 edhill 1.1 fi
208     }
209    
210     genmakemodel()
211     {
212     # genmakemodel directory
213 edhill 1.10 if test "x$NOGENMAKE" = xt ; then
214     echo "genmake skipped!"
215     else
216 edhill 1.34 if test "x$BASH" = x ; then
217     GENMAKE2="../../../tools/genmake2"
218     else
219     GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
220     fi
221 edhill 1.10 (
222     cd $1;
223 edhill 1.24 command="$GENMAKE2 -ds -m $MAKE"
224     if test "x$ADM" = x ; then
225     command="$command --mods=../code"
226     else
227     command="$command --mods=../code_ad"
228     command="$command -adof=../../../tools/adjoint_options/adjoint_staf"
229     fi
230 edhill 1.10 if test "x$OPTFILE" != xNONE ; then
231     command="$command --optfile=$OPTFILE"
232     fi
233     if test "x$IEEE" != x ; then
234     command="$command -ieee"
235     fi
236     printf 'genmake ... ' 1>&2
237     $command > make.log 2>&1
238     RETVAL=$?
239 edhill 1.21 cp Makefile $CDIR
240 edhill 1.10 if test "x$RETVAL" != x0 ; then
241     tail make.log
242     echo "genmakemodel: genmake failed" 1>&2
243 edhill 1.21 cp genmake_* make.log $CDIR
244 edhill 1.10 return 1
245     else
246 edhill 1.20 echo "successful" 1>&2
247 edhill 1.1 fi
248 edhill 1.10 )
249     fi
250 edhill 1.1 }
251    
252     makeclean()
253     {
254     # makeclean directory
255 edhill 1.10 if test "x$NOCLEAN" = xt ; then
256     echo "make CLEAN skipped!"
257     else
258     (
259     cd $1;
260     if test -e output.txt ; then
261     rm -f output.txt
262     fi
263     printf 'make CLEAN ... ' 2>&1
264     if test -r Makefile ; then
265     $MAKE CLEAN >> make.log 2>&1
266     RETVAL=$?
267     if test "x$RETVAL" != x0 ; then
268     tail make.log
269     echo "makeclean: \"make CLEAN\" failed" 1>&2
270     cp make.log $CDIR"/make.log"
271     return 1
272     fi
273     fi
274 edhill 1.20 echo successful 1>&2
275 edhill 1.10 exit 0
276     )
277     fi
278     }
279    
280     makedependmodel()
281     {
282     # makedependmodel directory
283     if test "x$NODEPEND" = xt ; then
284     echo "make depend skipped!"
285     else
286     (
287     cd $1;
288     printf 'make depend ... ' 1>&2
289     $MAKE depend >> make.log 2>&1
290 edhill 1.1 RETVAL=$?
291     if test "x$RETVAL" != x0 ; then
292     tail make.log
293 edhill 1.10 echo "makedependmodel: make depend failed" 1>&2
294 edhill 1.1 cp make.log $CDIR"/make.log"
295     return 1
296 edhill 1.10 else
297 edhill 1.20 echo successful 1>&2
298 edhill 1.1 fi
299 edhill 1.10 )
300     fi
301 edhill 1.1 }
302    
303     makemodel()
304     {
305     # makemodel directory
306     (
307     cd $1;
308     if test -r Makefile ; then
309     printf 'make ... ' 1>&2
310 edhill 1.24 if test "x$ADM" = x ; then
311 edhill 1.43 if test "x$JOBS" = x ; then
312     $MAKE >> make.log 2>&1
313     else
314     $MAKE -j $JOBS >> make.log 2>&1
315     fi
316 edhill 1.24 else
317     $MAKE adall >> make.log 2>&1
318     fi
319 edhill 1.1 RETVAL=$?
320     if test "x$RETVAL" != x0 ; then
321     tail make.log
322     echo failed 1>&2
323     cp make.log $CDIR"/make.log"
324     return 1
325     else
326 edhill 1.20 echo successful 1>&2
327 edhill 1.1 fi
328     fi
329     )
330     }
331    
332 edhill 1.27 symlink_mpifiles()
333     {
334     # Put special links so that MPI specific files are used
335     # This MUST be invoked between makeclean and makelinks because
336     # the Makefile will link to non-mpi files by default
337    
338     dir=$1
339     code_dir=$2
340     BUILD_DIR=$dir/$3
341     CODE_DIR=$dir/$code_dir
342    
343     # These are files that should replace their counter-part when using -mpi
344     MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
345    
346     # Is this an MPI run?
347     if test "x$MPI" = xt ; then
348     # YES: We symbolically link these files to the build
349     # dir so long as there is no real file in place
350     for ii in $MPI_FILES ; do
351     i=`echo $ii | sed 's:^\./::'`
352     name=`echo $i | sed 's:_mpi::' `
353     cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
354     RETVAL=$?
355     if test "x$RETVAL" != x0 ; then
356     if ! test -f $BUILD_DIR/$i ; then
357     #echo Linking $name to $i
358     (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
359     fi
360     fi
361     done
362     else
363     # NO: We undo any _mpi symbolically linked files
364     for ii in $MPI_FILES ; do
365     i=`echo $ii | sed 's:^\./::'`
366     name=`echo $i | sed 's:_mpi::' `
367     if test -L $BUILD_DIR/$name ; then
368     linktarg=`(cd $BUILD_DIR; readlink $name)`
369     if test $linktarg = "../$code_dir/$name"_mpi ; then
370     #echo Un-linking $name from $linktarg
371     rm -f $BUILD_DIR/$name
372     fi
373     fi
374     done
375     fi
376    
377     }
378    
379 edhill 1.1 linkdata()
380     {
381     # linkdata flag
382     #
383     # symbolically link data files to run directory
384 edhill 1.12 if test "x$1" = x1 ; then
385     (
386     cd $2
387 edhill 1.24 if test "x$ADM" = x ; then
388     files=`( cd ../input ; ls -1 | grep -v CVS )`
389     for i in $files ; do
390     if test ! -d "../input/"$i ; then
391     ln -sf "../input/"$i $i
392     fi
393     done
394     else
395     files=`( cd ../input ; ls -1 *.bin | grep -v CVS )`
396     for i in $files ; do
397     if test ! -d "../input/"$i ; then
398     ln -sf "../input/"$i $i
399     fi
400     done
401     files=`( cd ../input_ad ; ls -1 | grep -v CVS )`
402     for i in $files ; do
403     if test ! -d "../input_ad/"$i ; then
404     ln -sf "../input_ad/"$i $i
405     fi
406     done
407     fi
408 edhill 1.12 )
409 edhill 1.1 fi
410     }
411    
412     runmodel()
413     {
414 edhill 1.6 # runmodel directory
415 edhill 1.1 #
416 edhill 1.24 # runs "$COMMAND in "directory"
417 edhill 1.6 # (where "$COMMAND" is relative to "directory")
418 edhill 1.1 (
419     cd $1
420 edhill 1.20 printf 'runmodel ... ' 1>&2
421 edhill 1.6 # make output.txt
422 edhill 1.38 echo
423 edhill 1.39 # echo "COMMAND='$COMMAND'"
424     # echo "pwd='"`pwd`"'"
425 edhill 1.38 ( eval $COMMAND ) >> run.log 2>&1
426 edhill 1.6 RETVAL=$?
427     if test "x$RETVAL" = x0 ; then
428 edhill 1.20 echo successful 1>&2
429 edhill 1.24 if test "x$ADM" = x ; then
430     cp output.txt $CDIR"/output.txt"
431     else
432     cp output.txt_adm $CDIR"/output.txt_adm"
433     fi
434 edhill 1.6 return 0
435     else
436 edhill 1.20 tail run.log
437     echo failed 1>&2
438     cp run.log $CDIR"/run.log"
439 edhill 1.6 return 1
440 edhill 1.1 fi
441     )
442     }
443    
444     createcodelet()
445     {
446     # create codelet for comparing model output
447    
448 edhill 1.34 printf "creating the comparison code... "
449 edhill 1.22 cat > tmp_cmpnum.c <<EOF
450     #include <stdio.h>
451     #include <math.h>
452     int main( int argc, char** argv ) {
453 adcroft 1.33 int linnum,best,lncnt;
454 edhill 1.22 double a,b,diff;
455     best = -16;
456 adcroft 1.33 lncnt = 0;
457     while( 1 & (lncnt+=1) < 999 ) {
458 edhill 1.22 scanf("%d", &linnum);
459     if (linnum == -1) break;
460     scanf("%lf", &a); scanf("%lf", &b);
461     diff = 0.5*(fabs(a)+fabs(b));
462     if (diff > 1.e-12) {
463     diff=fabs(a-b)/diff;
464     if (diff > 0.0) {
465     linnum = (int)log10(diff);
466     best = (best > linnum) ? best : linnum;
467     }
468     else {
469     if (best == -16 && diff != 0) best = -22;
470     }
471     }
472     }
473 adcroft 1.33 if (lncnt == 999) best=-29;
474 edhill 1.22 printf("%d\n", -best);
475     return 0;
476     }
477     EOF
478     cc -o tmp_cmpnum tmp_cmpnum.c -lm
479 edhill 1.1
480 edhill 1.22 if [ -x ./tmp_cmpnum ]; then
481 edhill 1.1 echo "OK"
482     return 0
483     else
484     echo
485 edhill 1.21 echo "ERROR: failed to compile comparison code"
486 edhill 1.1 exit 1
487     fi
488     }
489    
490     formatresults()
491     {
492     # formatresults expt genmake depend make run results*
493    
494     nm=$1
495     printf '%s %s %s %s' $2 $3 $4 $5
496     shift; shift; shift; shift; shift;
497     printf '%3s' $@
498    
499     if [ $1 = '--' ]; then
500     printf ' N/O '
501     else
502     if [ $1 -gt 12 ]; then
503     printf ' pass'
504     else
505     printf ' FAIL'
506     fi
507     fi
508     printf ' %s' $nm
509     printf '\n'
510    
511     }
512    
513     show_help()
514     {
515     cat - << EOF
516     $0 [-help] [-quick] [-verbose] dir1 [dir2] [...]
517 edhill 1.10
518     -help|-h Show this help message
519 edhill 1.1 -quiet Reduce the amount of output
520     -verbose Produce copious amounts of output
521     -debug Produce even more output which will mean nothing to most
522     -force Do "make CLEAN" before compiling. This forces a complete rebuild.
523     -clean Do "make CLEAN" after compiling and testing.
524     -cleanup Aggresively removes all model output, executables and object files
525     and then exits. Use with care.
526    
527     Normal usage:
528     $0 * Configure, compile, run and analyze in all experiment directories
529     EOF
530     }
531    
532     scandirs()
533     {
534     if [ $# -eq 0 ]; then
535     for arg in * ; do
536     test -d $arg/input && echo $arg
537     done
538     else
539     echo $*
540     fi
541     }
542    
543    
544     ###############################################################################
545    
546    
547     # Default properties
548     debug=0
549     verbose=1
550     clean=0
551     expts=''
552 edhill 1.6 # ieee=1
553 edhill 1.10
554 edhill 1.40 IEEE=true
555 edhill 1.10 if test "x$MITGCM_IEEE" != x ; then
556     IEEE=$MITGCM_IEEE
557     fi
558    
559    
560     CLEANUP=f
561     QUICK=f
562     NOGENMAKE=f
563     NOCLEAN=f
564     NODEPEND=f
565 edhill 1.1
566 edhill 1.4 BASH=
567 edhill 1.10 OPTFILE=NONE
568     ADDRESSES=
569 edhill 1.1 TESTDIRS=
570     MPACKDIR="../tools/mpack-1.6"
571 edhill 1.20 HAVE_MPACK=
572 edhill 1.1 MPACK="$MPACKDIR/mpack"
573 edhill 1.24 COMMAND=
574 edhill 1.8 MAKE=make
575 edhill 1.43 JOBS=
576 edhill 1.7 MPI=f
577 edhill 1.40 DELDIR=
578 edhill 1.1
579 edhill 1.24 ADM=
580    
581 edhill 1.34 printf "parsing options... "
582 edhill 1.1
583     ac_prev=
584     for ac_option ; do
585    
586     # If the previous option needs an argument, assign it.
587     if test -n "$ac_prev"; then
588     eval "$ac_prev=\$ac_option"
589     ac_prev=
590     continue
591     fi
592    
593     ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
594    
595     case $ac_option in
596    
597     -help | --help | -h | --h)
598     usage ;;
599    
600 edhill 1.2 -optfile | --optfile | -of | --of)
601 edhill 1.10 ac_prev=OPTFILE ;;
602 edhill 1.2 -optfile=* | --optfile=* | -of=* | --of=*)
603 edhill 1.10 OPTFILE=$ac_optarg ;;
604 edhill 1.1
605     -addr | --addr | -a | --a)
606     ac_prev=ADDRESSES ;;
607     -addr=* | --addr=*)
608     ADDRESSES=$ac_optarg ;;
609    
610     -tdir | --tdir | -t | --t)
611     ac_prev=TESTDIRS ;;
612     -tdir=* | --tdir=*)
613     TESTDIRS=$ac_optarg ;;
614 edhill 1.4
615     -bash | --bash | -b | --b)
616     ac_prev=BASH ;;
617     -bash=* | --bash=*)
618     BASH=$ac_optarg ;;
619 edhill 1.5
620 edhill 1.6 -command | --command | -c | --c)
621     ac_prev=COMMAND ;;
622     -command=* | --command=*)
623     COMMAND=$ac_optarg ;;
624 edhill 1.8
625     -make | --make | -m | --m)
626     ac_prev=MAKE ;;
627     -make=* | --make=*)
628     MAKE=$ac_optarg ;;
629 edhill 1.1
630 edhill 1.43 -j) ac_prev=JOBS ;;
631     -j=*) JOBS=$ac_optarg ;;
632    
633 edhill 1.10 -clean | --clean)
634     CLEANUP=t ;;
635    
636     -quick | --quick | -q | --q)
637     QUICK=t ;;
638     -nogenmake | --nogenmake | -ng | --ng)
639     NOGENMAKE=t ;;
640     -noclean | --noclean | -nc | --nc)
641     NOCLEAN=t ;;
642     -nodepend | --nodepend | -nd | --nd)
643     NODEPEND=t ;;
644    
645 edhill 1.18 -mpi) MPI=t ;;
646 edhill 1.10
647 edhill 1.24 -adm | -ad) ADM=t ;;
648    
649 edhill 1.10 -ieee) IEEE=true ;;
650     -noieee) IEEE= ;;
651    
652 edhill 1.1 -verbose) verbose=2 ;;
653     -debug) debug=1 ;;
654     -quiet) verbose=0 ;;
655    
656 edhill 1.40 -deldir | -dd) DELDIR=t ;;
657    
658 edhill 1.1 -*)
659     echo "Error: unrecognized option: "$ac_option
660     usage
661     ;;
662    
663     *)
664     echo "Error: unrecognized argument: "$ac_option
665     usage
666     ;;
667    
668     esac
669    
670     done
671    
672 edhill 1.10 if test "x$QUICK" = xt ; then
673     NOGENMAKE=t
674     NOCLEAN=t
675     NODEPEND=t
676     fi
677    
678 edhill 1.1 if test "x$TESTDIRS" = x ; then
679     TESTDIRS=`scandirs`
680     fi
681    
682 edhill 1.10 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
683     OPTFILE=$MITGCM_OF
684     fi
685    
686 edhill 1.24 if test "x$ADM" = xt -a "x$COMMAND" = x ; then
687     COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1"
688     fi
689    
690     if test "x$COMMAND" = x ; then
691     COMMAND="make output.txt"
692     fi
693    
694 edhill 1.1 echo "OK"
695    
696     # create the FORTRAN comparison code
697     createcodelet
698    
699     # build the mpack utility
700 edhill 1.31 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
701 edhill 1.32 echo "skipping mpack build"
702     else
703 edhill 1.31 build_mpack
704     fi
705 edhill 1.1
706     # Create a uniquely named directory to store results
707     MACH=`hostname`
708 edhill 1.2 UNAMEA=`uname -a`
709 edhill 1.1 DATE=`date +%Y%m%d`
710 edhill 1.25 BASE="tr_"$MACH"_"$DATE"_"
711 edhill 1.1 DNUM=0
712     DRESULTS="$BASE$DNUM"
713     while test -e $DRESULTS ; do
714     DNUM=$(( $DNUM + 1 ))
715     DRESULTS="$BASE$DNUM"
716     done
717     mkdir $DRESULTS
718     RETVAL=$?
719     if test "x$RETVAL" != x0 ; then
720 edhill 1.20 echo "ERROR: Can't create results directory \"./$DRESULTS\""
721 edhill 1.1 exit 1
722     fi
723     SUMMARY="$DRESULTS/summary.txt"
724 edhill 1.34 printf "Start time: " >> $SUMMARY
725 edhill 1.16 start_date=`date`
726 edhill 1.17 echo $start_date > $SUMMARY
727 edhill 1.1
728 edhill 1.11 of_path=
729 edhill 1.10 if test "x$OPTFILE" != xNONE ; then
730     if test -r $OPTFILE ; then
731 edhill 1.11 # get the path
732     path=${OPTFILE%/*}
733     if test "x$path" = x ; then
734     of_path=`pwd`
735     else
736     of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
737     fi
738     file=${OPTFILE##*/}
739     OPTFILE=$of_path/$file
740 edhill 1.21 cp $OPTFILE $DRESULTS
741     echo >> $SUMMARY
742     echo " OPTFILE=$OPTFILE" >> $SUMMARY
743 edhill 1.11 else
744 edhill 1.21 echo | tee $SUMMARY
745     echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
746     exit 1
747 edhill 1.10 fi
748 edhill 1.21 else
749     echo >> $SUMMARY
750     echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
751     echo " so the genmake default will be used." >> $SUMMARY
752 edhill 1.10 fi
753     echo
754     echo >> $SUMMARY
755 edhill 1.24 if test "x$ADM" = x ; then
756     cat << EOF | tee -a $SUMMARY
757 edhill 1.21 T S U V
758     G D M c m s m s m s m s
759     E p a R g m m e . m m e . m m e . m m e .
760     N n k u 2 i a a d i a a d i a a d i a a d
761     2 d e n d n x n . n x n . n x n . n x n .
762    
763     EOF
764 edhill 1.24 else
765     echo "ADJOINT=true" >> $SUMMARY
766     echo >> $SUMMARY
767     cat << EOF | tee -a $SUMMARY
768     G D M C G
769     E p a R o r
770     N n k u s a
771     2 d e n t d
772    
773     EOF
774     fi
775 edhill 1.1
776 edhill 1.10 # ...and each test directory...
777     for dir in $TESTDIRS ; do
778    
779     # Cleanup only!
780     if test "x$CLEANUP" = xt ; then
781     if test -r $dir/build/Makefile ; then
782     ( cd $dir/build ; make CLEAN )
783     fi
784     if test -r $dir/input/Makefile ; then
785     ( cd $dir/input ; make CLEAN )
786     fi
787     continue
788 edhill 1.1 fi
789 edhill 1.3
790 edhill 1.10 # Verify that the testdir exists and contains previous
791     # results in the correct location--or skip this directory!
792 edhill 1.24 fout=
793     if test "x$ADM" = x ; then
794     fout=$dir"/results/output.txt"
795     else
796     fout=$dir"/results_ad/output.txt_adm"
797     fi
798     if test ! -r $fout ; then
799     echo "can't read \"$fout\" -- skipping $dir"
800 edhill 1.10 continue
801     fi
802 edhill 1.7
803 edhill 1.12 builddir="input"
804     rundir="input"
805     use_seperate_build=0
806     if test -d $dir/build -a -r $dir/build ; then
807     builddir="build"
808     rundir="build"
809     use_seperate_build=1
810     linkdata $use_seperate_build $dir/$rundir
811 edhill 1.10 fi
812    
813 edhill 1.34 # Check whether there are "extra runs" for this testdir
814     extra_runs=
815     if test "x$ADM" = x -a "x$use_seperate_build" = x1 ; then
816     ex_run_dirs=`( cd $dir ; echo input.* )`
817     echo "ex_run_dirs='$ex_run_dirs'"
818     for exd in $ex_run_dirs ; do
819     name=`echo $exd | sed -e 's/input.//g'`
820     outf="$dir/results/output.txt.$name"
821     if test -f $outf -a -r $outf ; then
822     extra_runs="$extra_runs $name"
823     fi
824     done
825     fi
826    
827 edhill 1.24 if test "x$ADM" = x ; then
828 edhill 1.27 code_dir=code
829 edhill 1.24 CODE_DIR=$dir/code
830     else
831 edhill 1.27 code_dir=code_ad
832 edhill 1.24 CODE_DIR=$dir/code_ad
833     fi
834 edhill 1.10 BUILD_DIR=$dir/$builddir
835 edhill 1.28
836 edhill 1.30 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
837 edhill 1.28 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
838     continue
839     fi
840    
841     echo "-------------------------------------------------------------------------------"
842     echo
843     echo "Experiment: $dir"
844     echo
845     unset genmake makedepend make run
846     results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --'
847 edhill 1.10
848     # Create an output dir for each OPTFILE/tdir combination
849 edhill 1.20 rel_CDIR=$DRESULTS"/"$dir
850     mkdir $rel_CDIR
851     CDIR=`pwd`"/$rel_CDIR"
852 edhill 1.10
853     if test "x$CLEANUP" = xt ; then
854     makeclean $dir/$builddir
855     else
856 edhill 1.1 genmakemodel $dir/$builddir && genmake=Y \
857     && makeclean $dir/$builddir \
858 edhill 1.27 && symlink_mpifiles $dir $code_dir $builddir \
859 edhill 1.1 && makedependmodel $dir/$builddir && makedepend=Y \
860     && makemodel $dir/$builddir && make=Y \
861 edhill 1.12 && linkdata $use_seperate_build $dir/$rundir \
862     && runmodel $dir/$rundir && run=Y \
863 edhill 1.1 && results=`testoutput $dir $rundir`
864 edhill 1.10 fi
865    
866     echo
867 edhill 1.24 if test "x$ADM" = x ; then
868     fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
869 edhill 1.34 echo
870     echo "$fres" >> $SUMMARY
871     echo "fresults='$fres'" > $CDIR"/summary.txt"
872     echo "MACH='$MACH'" >> $CDIR"/summary.txt"
873     echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
874     echo "DATE='$DATE'" >> $CDIR"/summary.txt"
875     echo "tdir='$dir'" >> $CDIR"/summary.txt"
876    
877 edhill 1.35 OLD_COMMAND=$COMMAND
878     COMMAND="./mitgcmuv > output.txt"
879 edhill 1.34 for ex in $extra_runs ; do
880 jmc 1.42 test -e "$dir/tr_run.$ex" && rm -rf "$dir/tr_run.$ex"
881     mkdir "$dir/tr_run.$ex"
882 edhill 1.36 links=`( cd "$dir/input" > /dev/null 2>&1 ; ls -1 | grep -v CVS )`
883 edhill 1.34 (
884 jmc 1.42 cd "$dir/tr_run.$ex"
885 edhill 1.34 for i in $links; do
886     ln -s ../input/$i $i
887     done
888     )
889 edhill 1.36 links=`( cd "$dir/input.$ex" > /dev/null 2>&1 ; ls -1 | grep -v CVS )`
890 edhill 1.34 (
891 jmc 1.42 cd "$dir/tr_run.$ex"
892 edhill 1.34 for i in $links; do
893     test -e $i && rm -f $i
894     ln -s ../input.$ex/$i $i
895     done
896     ln -s ../$builddir/mitgcmuv mitgcmuv
897     )
898 jmc 1.42 runmodel $dir/tr_run.$ex && run=Y \
899     && results=`testoutput $dir tr_run.$ex "."$ex`
900 edhill 1.34 fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
901     fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
902     fres="$fres.$ex"
903     echo
904     echo "$fres" >> $SUMMARY
905     echo "fresults='$fres'" > $CDIR"/summary.txt"
906     echo "MACH='$MACH'" >> $CDIR"/summary.txt"
907     echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
908     echo "DATE='$DATE'" >> $CDIR"/summary.txt"
909     echo "tdir='$dir'" >> $CDIR"/summary.txt"
910     done
911 edhill 1.35 COMMAND=$OLD_COMMAND
912 edhill 1.24 else
913     fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
914     fres=$fres"$results $dir"
915 edhill 1.34 echo
916     echo "$fres" >> $SUMMARY
917     echo "fresults='$fres'" > $CDIR"/summary.txt"
918     echo "MACH='$MACH'" >> $CDIR"/summary.txt"
919     echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
920     echo "DATE='$DATE'" >> $CDIR"/summary.txt"
921     echo "tdir='$dir'" >> $CDIR"/summary.txt"
922 edhill 1.24 fi
923 edhill 1.10
924     echo "-------------------------------------------------------------------------------"
925    
926 edhill 1.1 done
927    
928 edhill 1.34 printf "Start time: " >> $SUMMARY
929 edhill 1.16 echo $start_date >> $SUMMARY
930 edhill 1.34 printf "End time: " >> $SUMMARY
931 edhill 1.13 date >> $SUMMARY
932 edhill 1.20
933     # If addresses were supplied and mpack built successfully, then try
934     # to send email using mpack.
935     if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
936     echo "No results email was sent."
937     else
938     if test "x$HAVE_MPACK" = xt ; then
939     tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
940     && gzip $DRESULTS".tar" \
941     && $MPACK -s MITgcm-test -m 1500000 $DRESULTS".tar.gz" $ADDRESSES
942     RETVAL=$?
943     if test "x$RETVAL" != x0 ; then
944     echo
945     echo "Warning: The tar, gzip, & mpack step failed. Please send email"
946     echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
947     echo " summary of results from the directory \"$DRESULTS\"."
948     echo
949     else
950     echo
951     echo "An email containing results was sent to the following addresses:"
952     echo " \"$ADDRESSES\""
953     echo
954     fi
955     test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
956     test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
957     fi
958     fi
959 edhill 1.13
960 edhill 1.22 # rm -f tmp_cmpnum.f a.out
961     rm -f tmp_cmpnum.c tmp_cmpnum
962 edhill 1.1
963 edhill 1.12 if test "x$CLEANUP" != xt ; then
964     cat $SUMMARY
965 edhill 1.25 if test -e tr_out.txt ; then
966     mv tr_out.txt tr_out.txt.old
967 edhill 1.14 fi
968 edhill 1.25 cat $SUMMARY > tr_out.txt
969 edhill 1.12 fi
970 edhill 1.1
971 edhill 1.40 if test "x$DELDIR" = xt ; then
972     rm -rf $DRESULTS
973     fi
974    

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