/[MITgcm]/MITgcm/verification/testreport
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Revision 1.33 - (hide annotations) (download)
Thu Dec 18 15:12:34 2003 UTC (20 years, 3 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint52l_pre, checkpoint52e_pre, hrcube4, checkpoint52j_post, checkpoint52e_post, hrcube_1, checkpoint52l_post, checkpoint52k_post, checkpoint52f_post, checkpoint52i_post, checkpoint52j_pre, checkpoint52i_pre, checkpoint52h_pre, checkpoint52f_pre, hrcube_3
Changes since 1.32: +5 -3 lines
Hack to catch problem on cg01 with small numbers: "C" scanf doesn't properly
translate formatted number below 1E-99 which the model does write out on rare
occasions. Perhaps this little codelet should be in fortran?

1 edhill 1.19 #! /usr/bin/env bash
2 edhill 1.1 #
3 adcroft 1.33 # $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.32 2003/12/07 07:06:13 edhill Exp $
4 edhill 1.12 # $Name: $
5 edhill 1.1 #
6    
7     usage()
8     {
9     echo
10     echo "Usage: $0 [OPTIONS]"
11     echo
12     echo "where possible OPTIONS are:"
13     echo " (-help|-h) print usage"
14 edhill 1.7 echo " (-mpi) use MPI input files"
15 edhill 1.10 echo " (-ieee|-noieee) if possible, use IEEE compiler flags"
16 edhill 1.20 echo " (DEF=\"noieee\")"
17 edhill 1.6 echo " (-optfile=|-of=)STRING list of optfiles to use"
18 edhill 1.20 echo " (-a|-addr) STRING list of email recipients"
19 edhill 1.6 echo " (DEF=\"edhill@mitgcm.org\")"
20 edhill 1.20 echo " (-t|-tdir) STRING list of test dirs to use"
21 edhill 1.6 echo " (DEF=\"\" which builds all)"
22 edhill 1.20 echo " (-b|-bash) STRING preferred location of a \"bash\" or"
23     echo " Bourne-compatible \"sh\" shell"
24     echo " (DEF=\"\" for \"bash\")"
25 edhill 1.24 echo " (-adm|-ad) perform an adjoint run"
26 edhill 1.20 echo " (-command) STRING command to run"
27 edhill 1.6 echo " (DEF=\"make output.txt\")"
28 edhill 1.20 echo " (-m|-make) STRING command to use for \"make\""
29 edhill 1.8 echo " (DEF=\"make\")"
30 edhill 1.10 echo " (-clean) *ONLY* run \"make CLEAN\""
31     echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
32     echo " (-nogenmake|-ng) skip the genmake stage"
33     echo " (-noclean|-nc) skip the \"make clean\" stage"
34     echo " (-nodepend|-nd) skip the \"make depend\" stage"
35 edhill 1.6 echo
36     echo "and where STRING follows a whitespace-delimited format"
37     echo "such as:"
38     echo " -t 'exp0 exp2 exp3' "
39     echo " -addr='abc@123.com testing@home.org'"
40 edhill 1.1 echo
41     exit 1
42     }
43    
44     # build the mpack utility
45     build_mpack()
46     {
47     echo -n "building the mpack utility... "
48     if test ! -x "$MPACKDIR/mpack" ; then
49     if test ! -d $MPACKDIR ; then
50 edhill 1.20 echo
51 edhill 1.1 echo "Error: can't find \"$MPACKDIR\""
52     echo " are you sure this program is being run in the correct "
53     echo " (that is, \"MITGCM_ROOT\verification\") directory?"
54 edhill 1.20 echo
55     HAVE_MPACK=f
56 edhill 1.1 fi
57     echo -n "building mpack... "
58 edhill 1.26 if test "x$CC" = x ; then
59     export CC=cc
60     fi
61 edhill 1.25 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
62 edhill 1.1 RETVAL=$?
63     if test "x$RETVAL" != x0 ; then
64     echo
65     echo "Error building the mpack tools at: $MPACK_DIR"
66 edhill 1.20 echo
67     HAVE_MPACK=f
68     else
69 edhill 1.25 rm -f tr_build_mpack.out
70 edhill 1.20 HAVE_MPACK=t
71 edhill 1.1 fi
72 edhill 1.20 else
73     HAVE_MPACK=t
74 edhill 1.1 fi
75     echo "OK"
76     }
77    
78     testoutput_for_prop()
79     {
80     # testoutput_for_prop dir s1 label subdir
81     #
82     # compares files in $dir/$subdir/output.txt and $dir/results/output.txt
83     # using search strings s1 and text label
84    
85     if [ $debug -gt 0 ]; then
86     echo testoutput_for_prop: grep "$2" $1/$4/output.txt 1>&2
87     fi
88     if [ -r $1/$4/output.txt ]; then
89 edhill 1.15 grep "$2" $1/$4/output.txt | sed 's/.*=//' | cat -n > tmp1.txt
90 edhill 1.1 lncnt=`wc -l tmp1.txt | awk '{print $1}' `
91     if [ $lncnt -lt 3 ]; then
92     if [ $verbose -gt 0 ]; then
93     echo Not enough lines of output when searching for "$2" 1>&2
94     fi
95     return 99
96     fi
97     else
98     echo testoutput_for_prop: output.txt from model run was not readable 1>&2
99     return 99
100     fi
101     if [ $debug -gt 0 ]; then
102     echo testoutput_for_prop: grep "$2" $1/results/output.txt 1>&2
103     fi
104 edhill 1.15 grep "$2" $1/results/output.txt | sed 's/.*=//' | cat -n > tmp2.txt
105 edhill 1.1 lncnt=`wc -l tmp2.txt | awk '{print $1}' `
106     if [ $lncnt -lt 3 ]; then
107     if [ $verbose -gt 0 ]; then
108     echo Not enough lines of output when searching for "$2" 1>&2
109     fi
110     return 99
111     fi
112     if [ $debug -gt 0 ]; then
113     echo testoutput_for_prop: join tmp1.txt tmp2.txt 1>&2
114     fi
115     join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt
116     if [ $debug -gt 0 ]; then
117     echo testoutput_for_prop: compare_lines 1>&2
118     fi
119 edhill 1.22 if [ $verbose -gt 1 ]; then
120     cat tmp3.txt 1>&2
121     fi
122     echo "-1" >> tmp3.txt
123 edhill 1.23 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
124     cat tmp3.txt | sed -e 's|:||g' > tmp4.txt
125     digits_of_similarity=`./tmp_cmpnum < tmp4.txt`
126 edhill 1.1 if [ $digits_of_similarity -eq 99 ]; then
127     if [ $verbose -gt 0 ]; then
128     echo testoutput_for_prop: No comparison was available for \"$2\" 1>&2
129     fi
130     digits_of_similarity=99
131     else
132     if [ $verbose -gt 0 ]; then
133     echo There were $digits_of_similarity decimal places of similarity for \"$2\" 1>&2
134     fi
135     fi
136 edhill 1.23 rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt
137 edhill 1.1
138     return $digits_of_similarity
139     }
140    
141     dashnum()
142     {
143     # dashnum n1 n2 n3 ...
144     #
145     # print numbers using %3i format or "--" if number = 99
146    
147     for num in $@ ; do
148     if [ $num = 99 ]; then
149     printf ' --'
150     else
151     printf '%3i' $num
152     fi
153     done
154     }
155    
156 edhill 1.24 testoutput_ad()
157     {
158     grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $5}' > t05.txt
159     grep $3 $1/$2/output.txt_adm | awk '{print NR " " $5}' > t15.txt
160     grep $3 $1/results_ad/output.txt_adm | awk '{print NR " " $6}' > t06.txt
161     grep $3 $1/$2/output.txt_adm | awk '{print NR " " $6}' > t16.txt
162     join t05.txt t15.txt > t5.txt
163     join t06.txt t16.txt > t6.txt
164     echo "-1" >> t5.txt
165     echo "-1" >> t6.txt
166     digits_5=`./tmp_cmpnum < t5.txt`
167     digits_6=`./tmp_cmpnum < t6.txt`
168     dashnum $digits_5 $digits_6
169     rm -f t[01][56].txt t[56].txt
170     }
171    
172 edhill 1.1 testoutput()
173     {
174 edhill 1.24 # testoutput directory subdir
175 edhill 1.1 #
176     # test output in "directory"
177 edhill 1.24 if test "x$ADM" = x ; then
178     if [ $debug -gt 0 ]; then
179     echo testoutput: testoutput_for_prop $1 cg2d_init_res 1>&2
180     fi
181     testoutput_for_prop $1 "cg2d_init_res" "cg2d init. residual" $2; cg2dres=$?
182     if [ $debug -gt 0 ]; then
183     echo testoutput: cg2dres=$cg2dres 1>&2
184     fi
185     testoutput_for_prop $1 "dynstat_theta_min" "theta minimum" $2; tmin=$?
186     testoutput_for_prop $1 "dynstat_theta_max" "theta maximum" $2; tmax=$?
187     testoutput_for_prop $1 "dynstat_theta_mean" "theta mean" $2; tmean=$?
188     testoutput_for_prop $1 "dynstat_theta_sd" "theta s.d." $2; tsd=$?
189     testoutput_for_prop $1 "dynstat_salt_min" "salt minimum" $2; smin=$?
190     testoutput_for_prop $1 "dynstat_salt_max" "salt maximum" $2; smax=$?
191     testoutput_for_prop $1 "dynstat_salt_mean" "salt mean" $2; smean=$?
192     testoutput_for_prop $1 "dynstat_salt_sd" "salt s.d." $2; ssd=$?
193     testoutput_for_prop $1 "dynstat_uvel_min" "U minimum" $2; umin=$?
194     testoutput_for_prop $1 "dynstat_uvel_max" "U maximum" $2; umax=$?
195     testoutput_for_prop $1 "dynstat_uvel_mean" "U mean" $2; umean=$?
196     testoutput_for_prop $1 "dynstat_uvel_sd" "U s.d." $2; usd=$?
197     testoutput_for_prop $1 "dynstat_vvel_min" "V minimum" $2; vmin=$?
198     testoutput_for_prop $1 "dynstat_vvel_max" "V maximum" $2; vmax=$?
199     testoutput_for_prop $1 "dynstat_vvel_mean" "V mean" $2; vmean=$?
200     testoutput_for_prop $1 "dynstat_vvel_sd" "V s.d." $2; vsd=$?
201     dashnum $cg2dres $tmin $tmax $tmean $tsd $smin $smax $smean $ssd \
202     $umin $umax $umean $usd $vmin $vmax $vmean $vsd
203     else
204     testoutput_ad $1 $2 "precision_grdchk_result"
205 edhill 1.1 fi
206     }
207    
208     genmakemodel()
209     {
210     # genmakemodel directory
211 edhill 1.10 if test "x$NOGENMAKE" = xt ; then
212     echo "genmake skipped!"
213     else
214     GENMAKE2="$BASH ../../../tools/genmake2"
215     (
216     cd $1;
217 edhill 1.24 command="$GENMAKE2 -ds -m $MAKE"
218     if test "x$ADM" = x ; then
219     command="$command --mods=../code"
220     else
221     command="$command --mods=../code_ad"
222     command="$command -adof=../../../tools/adjoint_options/adjoint_staf"
223     fi
224 edhill 1.10 if test "x$OPTFILE" != xNONE ; then
225     command="$command --optfile=$OPTFILE"
226     fi
227     if test "x$IEEE" != x ; then
228     command="$command -ieee"
229     fi
230     printf 'genmake ... ' 1>&2
231     $command > make.log 2>&1
232     RETVAL=$?
233 edhill 1.21 cp Makefile $CDIR
234 edhill 1.10 if test "x$RETVAL" != x0 ; then
235     tail make.log
236     echo "genmakemodel: genmake failed" 1>&2
237 edhill 1.21 cp genmake_* make.log $CDIR
238 edhill 1.10 return 1
239     else
240 edhill 1.20 echo "successful" 1>&2
241 edhill 1.1 fi
242 edhill 1.10 )
243     fi
244 edhill 1.1 }
245    
246     makeclean()
247     {
248     # makeclean directory
249 edhill 1.10 if test "x$NOCLEAN" = xt ; then
250     echo "make CLEAN skipped!"
251     else
252     (
253     cd $1;
254     if test -e output.txt ; then
255     rm -f output.txt
256     fi
257     printf 'make CLEAN ... ' 2>&1
258     if test -r Makefile ; then
259     $MAKE CLEAN >> make.log 2>&1
260     RETVAL=$?
261     if test "x$RETVAL" != x0 ; then
262     tail make.log
263     echo "makeclean: \"make CLEAN\" failed" 1>&2
264     cp make.log $CDIR"/make.log"
265     return 1
266     fi
267     fi
268 edhill 1.20 echo successful 1>&2
269 edhill 1.10 exit 0
270     )
271     fi
272     }
273    
274     makedependmodel()
275     {
276     # makedependmodel directory
277     if test "x$NODEPEND" = xt ; then
278     echo "make depend skipped!"
279     else
280     (
281     cd $1;
282     printf 'make depend ... ' 1>&2
283     $MAKE depend >> make.log 2>&1
284 edhill 1.1 RETVAL=$?
285     if test "x$RETVAL" != x0 ; then
286     tail make.log
287 edhill 1.10 echo "makedependmodel: make depend failed" 1>&2
288 edhill 1.1 cp make.log $CDIR"/make.log"
289     return 1
290 edhill 1.10 else
291 edhill 1.20 echo successful 1>&2
292 edhill 1.1 fi
293 edhill 1.10 )
294     fi
295 edhill 1.1 }
296    
297     makemodel()
298     {
299     # makemodel directory
300     (
301     cd $1;
302     if test -r Makefile ; then
303     printf 'make ... ' 1>&2
304 edhill 1.24 if test "x$ADM" = x ; then
305     $MAKE >> make.log 2>&1
306     else
307     $MAKE adall >> make.log 2>&1
308     fi
309 edhill 1.1 RETVAL=$?
310     if test "x$RETVAL" != x0 ; then
311     tail make.log
312     echo failed 1>&2
313     cp make.log $CDIR"/make.log"
314     return 1
315     else
316 edhill 1.20 echo successful 1>&2
317 edhill 1.1 fi
318     fi
319     )
320     }
321    
322 edhill 1.27 symlink_mpifiles()
323     {
324     # Put special links so that MPI specific files are used
325     # This MUST be invoked between makeclean and makelinks because
326     # the Makefile will link to non-mpi files by default
327    
328     dir=$1
329     code_dir=$2
330     BUILD_DIR=$dir/$3
331     CODE_DIR=$dir/$code_dir
332    
333     # These are files that should replace their counter-part when using -mpi
334     MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")`
335    
336     # Is this an MPI run?
337     if test "x$MPI" = xt ; then
338     # YES: We symbolically link these files to the build
339     # dir so long as there is no real file in place
340     for ii in $MPI_FILES ; do
341     i=`echo $ii | sed 's:^\./::'`
342     name=`echo $i | sed 's:_mpi::' `
343     cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1
344     RETVAL=$?
345     if test "x$RETVAL" != x0 ; then
346     if ! test -f $BUILD_DIR/$i ; then
347     #echo Linking $name to $i
348     (cd $BUILD_DIR; ln -sf ../$code_dir/$i $name)
349     fi
350     fi
351     done
352     else
353     # NO: We undo any _mpi symbolically linked files
354     for ii in $MPI_FILES ; do
355     i=`echo $ii | sed 's:^\./::'`
356     name=`echo $i | sed 's:_mpi::' `
357     if test -L $BUILD_DIR/$name ; then
358     linktarg=`(cd $BUILD_DIR; readlink $name)`
359     if test $linktarg = "../$code_dir/$name"_mpi ; then
360     #echo Un-linking $name from $linktarg
361     rm -f $BUILD_DIR/$name
362     fi
363     fi
364     done
365     fi
366    
367     }
368    
369 edhill 1.1 linkdata()
370     {
371     # linkdata flag
372     #
373     # symbolically link data files to run directory
374 edhill 1.12 if test "x$1" = x1 ; then
375     (
376     cd $2
377 edhill 1.24 if test "x$ADM" = x ; then
378     files=`( cd ../input ; ls -1 | grep -v CVS )`
379     for i in $files ; do
380     if test ! -d "../input/"$i ; then
381     ln -sf "../input/"$i $i
382     fi
383     done
384     else
385     files=`( cd ../input ; ls -1 *.bin | grep -v CVS )`
386     for i in $files ; do
387     if test ! -d "../input/"$i ; then
388     ln -sf "../input/"$i $i
389     fi
390     done
391     files=`( cd ../input_ad ; ls -1 | grep -v CVS )`
392     for i in $files ; do
393     if test ! -d "../input_ad/"$i ; then
394     ln -sf "../input_ad/"$i $i
395     fi
396     done
397     fi
398 edhill 1.12 )
399 edhill 1.1 fi
400     }
401    
402     runmodel()
403     {
404 edhill 1.6 # runmodel directory
405 edhill 1.1 #
406 edhill 1.24 # runs "$COMMAND in "directory"
407 edhill 1.6 # (where "$COMMAND" is relative to "directory")
408 edhill 1.1 (
409     cd $1
410 edhill 1.20 printf 'runmodel ... ' 1>&2
411 edhill 1.6 # make output.txt
412 edhill 1.20 $COMMAND >> run.log 2>&1
413 edhill 1.6 RETVAL=$?
414     if test "x$RETVAL" = x0 ; then
415 edhill 1.20 echo successful 1>&2
416 edhill 1.24 if test "x$ADM" = x ; then
417     cp output.txt $CDIR"/output.txt"
418     else
419     cp output.txt_adm $CDIR"/output.txt_adm"
420     fi
421 edhill 1.6 return 0
422     else
423 edhill 1.20 tail run.log
424     echo failed 1>&2
425     cp run.log $CDIR"/run.log"
426 edhill 1.6 return 1
427 edhill 1.1 fi
428     )
429     }
430    
431     createcodelet()
432     {
433     # create codelet for comparing model output
434    
435     echo -n "creating the comparison code... "
436 edhill 1.22 cat > tmp_cmpnum.c <<EOF
437     #include <stdio.h>
438     #include <math.h>
439     int main( int argc, char** argv ) {
440 adcroft 1.33 int linnum,best,lncnt;
441 edhill 1.22 double a,b,diff;
442     best = -16;
443 adcroft 1.33 lncnt = 0;
444     while( 1 & (lncnt+=1) < 999 ) {
445 edhill 1.22 scanf("%d", &linnum);
446     if (linnum == -1) break;
447     scanf("%lf", &a); scanf("%lf", &b);
448     diff = 0.5*(fabs(a)+fabs(b));
449     if (diff > 1.e-12) {
450     diff=fabs(a-b)/diff;
451     if (diff > 0.0) {
452     linnum = (int)log10(diff);
453     best = (best > linnum) ? best : linnum;
454     }
455     else {
456     if (best == -16 && diff != 0) best = -22;
457     }
458     }
459     }
460 adcroft 1.33 if (lncnt == 999) best=-29;
461 edhill 1.22 printf("%d\n", -best);
462     return 0;
463     }
464     EOF
465     cc -o tmp_cmpnum tmp_cmpnum.c -lm
466 edhill 1.1
467 edhill 1.22 if [ -x ./tmp_cmpnum ]; then
468 edhill 1.1 echo "OK"
469     return 0
470     else
471     echo
472 edhill 1.21 echo "ERROR: failed to compile comparison code"
473 edhill 1.1 exit 1
474     fi
475     }
476    
477     formatresults()
478     {
479     # formatresults expt genmake depend make run results*
480    
481     nm=$1
482     printf '%s %s %s %s' $2 $3 $4 $5
483     shift; shift; shift; shift; shift;
484     printf '%3s' $@
485    
486     if [ $1 = '--' ]; then
487     printf ' N/O '
488     else
489     if [ $1 -gt 12 ]; then
490     printf ' pass'
491     else
492     printf ' FAIL'
493     fi
494     fi
495     printf ' %s' $nm
496     printf '\n'
497    
498     }
499    
500     show_help()
501     {
502     cat - << EOF
503     $0 [-help] [-quick] [-verbose] dir1 [dir2] [...]
504 edhill 1.10
505     -help|-h Show this help message
506 edhill 1.1 -quiet Reduce the amount of output
507     -verbose Produce copious amounts of output
508     -debug Produce even more output which will mean nothing to most
509     -force Do "make CLEAN" before compiling. This forces a complete rebuild.
510     -clean Do "make CLEAN" after compiling and testing.
511     -cleanup Aggresively removes all model output, executables and object files
512     and then exits. Use with care.
513    
514     Normal usage:
515     $0 * Configure, compile, run and analyze in all experiment directories
516     EOF
517     }
518    
519     scandirs()
520     {
521     if [ $# -eq 0 ]; then
522     for arg in * ; do
523     test -d $arg/input && echo $arg
524     done
525     else
526     echo $*
527     fi
528     }
529    
530    
531     ###############################################################################
532    
533    
534     # Default properties
535     debug=0
536     verbose=1
537     clean=0
538     expts=''
539 edhill 1.6 # ieee=1
540 edhill 1.10
541     IEEE=
542     if test "x$MITGCM_IEEE" != x ; then
543     IEEE=$MITGCM_IEEE
544     fi
545    
546    
547     CLEANUP=f
548     QUICK=f
549     NOGENMAKE=f
550     NOCLEAN=f
551     NODEPEND=f
552 edhill 1.1
553 edhill 1.4 BASH=
554 edhill 1.10 OPTFILE=NONE
555     ADDRESSES=
556 edhill 1.1 TESTDIRS=
557     MPACKDIR="../tools/mpack-1.6"
558 edhill 1.20 HAVE_MPACK=
559 edhill 1.1 MPACK="$MPACKDIR/mpack"
560 edhill 1.24 COMMAND=
561 edhill 1.8 MAKE=make
562 edhill 1.7 MPI=f
563 edhill 1.1
564 edhill 1.24 ADM=
565    
566 edhill 1.1 echo -n "parsing options... "
567    
568     ac_prev=
569     for ac_option ; do
570    
571     # If the previous option needs an argument, assign it.
572     if test -n "$ac_prev"; then
573     eval "$ac_prev=\$ac_option"
574     ac_prev=
575     continue
576     fi
577    
578     ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
579    
580     case $ac_option in
581    
582     -help | --help | -h | --h)
583     usage ;;
584    
585 edhill 1.2 -optfile | --optfile | -of | --of)
586 edhill 1.10 ac_prev=OPTFILE ;;
587 edhill 1.2 -optfile=* | --optfile=* | -of=* | --of=*)
588 edhill 1.10 OPTFILE=$ac_optarg ;;
589 edhill 1.1
590     -addr | --addr | -a | --a)
591     ac_prev=ADDRESSES ;;
592     -addr=* | --addr=*)
593     ADDRESSES=$ac_optarg ;;
594    
595     -tdir | --tdir | -t | --t)
596     ac_prev=TESTDIRS ;;
597     -tdir=* | --tdir=*)
598     TESTDIRS=$ac_optarg ;;
599 edhill 1.4
600     -bash | --bash | -b | --b)
601     ac_prev=BASH ;;
602     -bash=* | --bash=*)
603     BASH=$ac_optarg ;;
604 edhill 1.5
605 edhill 1.6 -command | --command | -c | --c)
606     ac_prev=COMMAND ;;
607     -command=* | --command=*)
608     COMMAND=$ac_optarg ;;
609 edhill 1.8
610     -make | --make | -m | --m)
611     ac_prev=MAKE ;;
612     -make=* | --make=*)
613     MAKE=$ac_optarg ;;
614 edhill 1.1
615 edhill 1.10 -clean | --clean)
616     CLEANUP=t ;;
617    
618     -quick | --quick | -q | --q)
619     QUICK=t ;;
620     -nogenmake | --nogenmake | -ng | --ng)
621     NOGENMAKE=t ;;
622     -noclean | --noclean | -nc | --nc)
623     NOCLEAN=t ;;
624     -nodepend | --nodepend | -nd | --nd)
625     NODEPEND=t ;;
626    
627 edhill 1.18 -mpi) MPI=t ;;
628 edhill 1.10
629 edhill 1.24 -adm | -ad) ADM=t ;;
630    
631 edhill 1.10 -ieee) IEEE=true ;;
632     -noieee) IEEE= ;;
633    
634 edhill 1.1 -verbose) verbose=2 ;;
635     -debug) debug=1 ;;
636     -quiet) verbose=0 ;;
637    
638     -*)
639     echo "Error: unrecognized option: "$ac_option
640     usage
641     ;;
642    
643     *)
644     echo "Error: unrecognized argument: "$ac_option
645     usage
646     ;;
647    
648     esac
649    
650     done
651    
652 edhill 1.10 if test "x$QUICK" = xt ; then
653     NOGENMAKE=t
654     NOCLEAN=t
655     NODEPEND=t
656     fi
657    
658 edhill 1.1 if test "x$TESTDIRS" = x ; then
659     TESTDIRS=`scandirs`
660     fi
661    
662 edhill 1.10 if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then
663     OPTFILE=$MITGCM_OF
664     fi
665    
666 edhill 1.24 if test "x$ADM" = xt -a "x$COMMAND" = x ; then
667     COMMAND="./mitgcmuv_ad > output.txt_adm 2>&1"
668     fi
669    
670     if test "x$COMMAND" = x ; then
671     COMMAND="make output.txt"
672     fi
673    
674 edhill 1.1 echo "OK"
675    
676     # create the FORTRAN comparison code
677     createcodelet
678    
679     # build the mpack utility
680 edhill 1.31 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
681 edhill 1.32 echo "skipping mpack build"
682     else
683 edhill 1.31 build_mpack
684     fi
685 edhill 1.1
686     # Create a uniquely named directory to store results
687     MACH=`hostname`
688 edhill 1.2 UNAMEA=`uname -a`
689 edhill 1.1 DATE=`date +%Y%m%d`
690 edhill 1.25 BASE="tr_"$MACH"_"$DATE"_"
691 edhill 1.1 DNUM=0
692     DRESULTS="$BASE$DNUM"
693     while test -e $DRESULTS ; do
694     DNUM=$(( $DNUM + 1 ))
695     DRESULTS="$BASE$DNUM"
696     done
697     mkdir $DRESULTS
698     RETVAL=$?
699     if test "x$RETVAL" != x0 ; then
700 edhill 1.20 echo "ERROR: Can't create results directory \"./$DRESULTS\""
701 edhill 1.1 exit 1
702     fi
703     SUMMARY="$DRESULTS/summary.txt"
704 edhill 1.13 echo -n "Start time: " >> $SUMMARY
705 edhill 1.16 start_date=`date`
706 edhill 1.17 echo $start_date > $SUMMARY
707 edhill 1.1
708 edhill 1.11 of_path=
709 edhill 1.10 if test "x$OPTFILE" != xNONE ; then
710     if test -r $OPTFILE ; then
711 edhill 1.11 # get the path
712     path=${OPTFILE%/*}
713     if test "x$path" = x ; then
714     of_path=`pwd`
715     else
716     of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
717     fi
718     file=${OPTFILE##*/}
719     OPTFILE=$of_path/$file
720 edhill 1.21 cp $OPTFILE $DRESULTS
721     echo >> $SUMMARY
722     echo " OPTFILE=$OPTFILE" >> $SUMMARY
723 edhill 1.11 else
724 edhill 1.21 echo | tee $SUMMARY
725     echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY
726     exit 1
727 edhill 1.10 fi
728 edhill 1.21 else
729     echo >> $SUMMARY
730     echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY
731     echo " so the genmake default will be used." >> $SUMMARY
732 edhill 1.10 fi
733     echo
734     echo >> $SUMMARY
735 edhill 1.24 if test "x$ADM" = x ; then
736     cat << EOF | tee -a $SUMMARY
737 edhill 1.21 T S U V
738     G D M c m s m s m s m s
739     E p a R g m m e . m m e . m m e . m m e .
740     N n k u 2 i a a d i a a d i a a d i a a d
741     2 d e n d n x n . n x n . n x n . n x n .
742    
743     EOF
744 edhill 1.24 else
745     echo "ADJOINT=true" >> $SUMMARY
746     echo >> $SUMMARY
747     cat << EOF | tee -a $SUMMARY
748     G D M C G
749     E p a R o r
750     N n k u s a
751     2 d e n t d
752    
753     EOF
754     fi
755 edhill 1.1
756 edhill 1.10 # ...and each test directory...
757     for dir in $TESTDIRS ; do
758    
759     # Cleanup only!
760     if test "x$CLEANUP" = xt ; then
761     if test -r $dir/build/Makefile ; then
762     ( cd $dir/build ; make CLEAN )
763     fi
764     if test -r $dir/input/Makefile ; then
765     ( cd $dir/input ; make CLEAN )
766     fi
767     continue
768 edhill 1.1 fi
769 edhill 1.3
770 edhill 1.10 # Verify that the testdir exists and contains previous
771     # results in the correct location--or skip this directory!
772 edhill 1.24 fout=
773     if test "x$ADM" = x ; then
774     fout=$dir"/results/output.txt"
775     else
776     fout=$dir"/results_ad/output.txt_adm"
777     fi
778     if test ! -r $fout ; then
779     echo "can't read \"$fout\" -- skipping $dir"
780 edhill 1.10 continue
781     fi
782 edhill 1.7
783 edhill 1.12 builddir="input"
784     rundir="input"
785     use_seperate_build=0
786     if test -d $dir/build -a -r $dir/build ; then
787     builddir="build"
788     rundir="build"
789     use_seperate_build=1
790     linkdata $use_seperate_build $dir/$rundir
791 edhill 1.10 fi
792    
793 edhill 1.24 if test "x$ADM" = x ; then
794 edhill 1.27 code_dir=code
795 edhill 1.24 CODE_DIR=$dir/code
796     else
797 edhill 1.27 code_dir=code_ad
798 edhill 1.24 CODE_DIR=$dir/code_ad
799     fi
800 edhill 1.10 BUILD_DIR=$dir/$builddir
801 edhill 1.28
802 edhill 1.30 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then
803 edhill 1.28 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
804     continue
805     fi
806    
807     echo "-------------------------------------------------------------------------------"
808     echo
809     echo "Experiment: $dir"
810     echo
811     unset genmake makedepend make run
812     results='-- -- -- -- -- -- -- -- -- -- -- -- -- -- -- -- --'
813 edhill 1.10
814     # Create an output dir for each OPTFILE/tdir combination
815 edhill 1.20 rel_CDIR=$DRESULTS"/"$dir
816     mkdir $rel_CDIR
817     CDIR=`pwd`"/$rel_CDIR"
818 edhill 1.10
819     if test "x$CLEANUP" = xt ; then
820     makeclean $dir/$builddir
821     else
822 edhill 1.1 genmakemodel $dir/$builddir && genmake=Y \
823     && makeclean $dir/$builddir \
824 edhill 1.27 && symlink_mpifiles $dir $code_dir $builddir \
825 edhill 1.1 && makedependmodel $dir/$builddir && makedepend=Y \
826     && makemodel $dir/$builddir && make=Y \
827 edhill 1.12 && linkdata $use_seperate_build $dir/$rundir \
828     && runmodel $dir/$rundir && run=Y \
829 edhill 1.1 && results=`testoutput $dir $rundir`
830 edhill 1.10 fi
831    
832     echo
833 edhill 1.24 if test "x$ADM" = x ; then
834     fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
835     else
836     fres=`printf '%s %s %s %s' ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N}`
837     fres=$fres"$results $dir"
838     fi
839 edhill 1.10 echo
840 edhill 1.21 echo "$fres" >> $SUMMARY
841     echo "fresults='$fres'" > $CDIR"/summary.txt"
842 edhill 1.10 echo "MACH='$MACH'" >> $CDIR"/summary.txt"
843     echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt"
844     echo "DATE='$DATE'" >> $CDIR"/summary.txt"
845     echo "tdir='$dir'" >> $CDIR"/summary.txt"
846    
847     echo "-------------------------------------------------------------------------------"
848    
849 edhill 1.1 done
850    
851 edhill 1.13 echo -n "Start time: " >> $SUMMARY
852 edhill 1.16 echo $start_date >> $SUMMARY
853 edhill 1.13 echo -n "End time: " >> $SUMMARY
854     date >> $SUMMARY
855 edhill 1.20
856     # If addresses were supplied and mpack built successfully, then try
857     # to send email using mpack.
858     if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
859     echo "No results email was sent."
860     else
861     if test "x$HAVE_MPACK" = xt ; then
862     tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \
863     && gzip $DRESULTS".tar" \
864     && $MPACK -s MITgcm-test -m 1500000 $DRESULTS".tar.gz" $ADDRESSES
865     RETVAL=$?
866     if test "x$RETVAL" != x0 ; then
867     echo
868     echo "Warning: The tar, gzip, & mpack step failed. Please send email"
869     echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
870     echo " summary of results from the directory \"$DRESULTS\"."
871     echo
872     else
873     echo
874     echo "An email containing results was sent to the following addresses:"
875     echo " \"$ADDRESSES\""
876     echo
877     fi
878     test -f $DRESULTS".tar" && rm -f $DRESULTS".tar"
879     test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz"
880     fi
881     fi
882 edhill 1.13
883 edhill 1.22 # rm -f tmp_cmpnum.f a.out
884     rm -f tmp_cmpnum.c tmp_cmpnum
885 edhill 1.1
886 edhill 1.12 if test "x$CLEANUP" != xt ; then
887     cat $SUMMARY
888 edhill 1.25 if test -e tr_out.txt ; then
889     mv tr_out.txt tr_out.txt.old
890 edhill 1.14 fi
891 edhill 1.25 cat $SUMMARY > tr_out.txt
892 edhill 1.12 fi
893 edhill 1.1

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