1 |
edhill |
1.19 |
#! /usr/bin/env bash |
2 |
edhill |
1.1 |
# |
3 |
jmc |
1.107 |
# $Header: /u/gcmpack/MITgcm/verification/testreport,v 1.106 2007/10/23 19:36:15 jmc Exp $ |
4 |
edhill |
1.12 |
# $Name: $ |
5 |
edhill |
1.1 |
# |
6 |
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7 |
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usage() |
8 |
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{ |
9 |
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echo |
10 |
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echo "Usage: $0 [OPTIONS]" |
11 |
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echo |
12 |
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echo "where possible OPTIONS are:" |
13 |
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echo " (-help|-h) print usage" |
14 |
jmc |
1.83 |
echo " (-mth) run multi threaded (using eedata.mth)" |
15 |
|
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echo " (-mpi) compile and run using MPI" |
16 |
edhill |
1.10 |
echo " (-ieee|-noieee) if possible, use IEEE compiler flags" |
17 |
edhill |
1.41 |
echo " (DEF=\"-ieee\")" |
18 |
jmc |
1.89 |
echo " (-of=|-optfile=)STRING list of optfiles to use" |
19 |
edhill |
1.20 |
echo " (-a|-addr) STRING list of email recipients" |
20 |
edhill |
1.6 |
echo " (DEF=\"edhill@mitgcm.org\")" |
21 |
jmc |
1.84 |
echo " (-t|-tdir) STRING list of group and/or exp. dirs to test" |
22 |
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echo " (recognized groups: basic, tutorials)" |
23 |
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echo " (DEF=\"\" which test all)" |
24 |
jmc |
1.89 |
echo " (-skd|-skipdir) STRING list of exp. dirs to skip" |
25 |
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echo " (DEF=\"\" which test all)" |
26 |
edhill |
1.20 |
echo " (-b|-bash) STRING preferred location of a \"bash\" or" |
27 |
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echo " Bourne-compatible \"sh\" shell" |
28 |
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echo " (DEF=\"\" for \"bash\")" |
29 |
edhill |
1.24 |
echo " (-adm|-ad) perform an adjoint run" |
30 |
edhill |
1.20 |
echo " (-command) STRING command to run" |
31 |
edhill |
1.6 |
echo " (DEF=\"make output.txt\")" |
32 |
edhill |
1.20 |
echo " (-m|-make) STRING command to use for \"make\"" |
33 |
edhill |
1.8 |
echo " (DEF=\"make\")" |
34 |
jmc |
1.70 |
echo " (-odir) STRING used to build output directory name" |
35 |
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echo " (DEF=\"hostname\")" |
36 |
jmc |
1.89 |
echo " (-ptr|-ptracers) STRING specify which ptracers to test" |
37 |
edhill |
1.50 |
echo " (DEF=\"1 2 3 4 5\")" |
38 |
jmc |
1.92 |
echo " (-match) NUMBER Matching Criteria (number of digits)" |
39 |
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echo " (DEF=\"12\")" |
40 |
edhill |
1.43 |
echo " (-j) JOBS use \"make -j JOBS\" for parallel builds" |
41 |
edhill |
1.10 |
echo " (-clean) *ONLY* run \"make CLEAN\"" |
42 |
ce107 |
1.90 |
echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\"" |
43 |
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echo " (-nogenmake|-ng) skip the genmake stage" |
44 |
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echo " (-noclean|-nc) skip the \"make clean\" stage" |
45 |
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echo " (-nodepend|-nd) skip the \"make depend\" stage" |
46 |
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echo " (-deldir|-dd) on success, delete the output directory" |
47 |
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echo " (-ts) provide timing information per timestep" |
48 |
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echo " (-papis) provide MFlop/s per timestep using PAPI" |
49 |
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echo " (-pcls) provide MFlop/s per timestep using PCL" |
50 |
edhill |
1.6 |
echo |
51 |
edhill |
1.50 |
echo "and where STRING can be a whitespace-delimited list" |
52 |
edhill |
1.6 |
echo "such as:" |
53 |
edhill |
1.50 |
echo |
54 |
edhill |
1.6 |
echo " -t 'exp0 exp2 exp3' " |
55 |
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echo " -addr='abc@123.com testing@home.org'" |
56 |
edhill |
1.1 |
echo |
57 |
edhill |
1.50 |
echo "provided that the expression is properly quoted within the current" |
58 |
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echo "shell (note the use of single quotes to protect white space)." |
59 |
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echo |
60 |
edhill |
1.1 |
exit 1 |
61 |
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} |
62 |
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63 |
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# build the mpack utility |
64 |
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build_mpack() |
65 |
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{ |
66 |
edhill |
1.34 |
printf "building the mpack utility... " |
67 |
edhill |
1.1 |
if test ! -x "$MPACKDIR/mpack" ; then |
68 |
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if test ! -d $MPACKDIR ; then |
69 |
edhill |
1.20 |
echo |
70 |
edhill |
1.1 |
echo "Error: can't find \"$MPACKDIR\"" |
71 |
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echo " are you sure this program is being run in the correct " |
72 |
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echo " (that is, \"MITGCM_ROOT\verification\") directory?" |
73 |
edhill |
1.20 |
echo |
74 |
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HAVE_MPACK=f |
75 |
edhill |
1.1 |
fi |
76 |
edhill |
1.34 |
printf "building mpack... " |
77 |
edhill |
1.26 |
if test "x$CC" = x ; then |
78 |
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export CC=cc |
79 |
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fi |
80 |
edhill |
1.25 |
( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1 |
81 |
edhill |
1.1 |
RETVAL=$? |
82 |
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if test "x$RETVAL" != x0 ; then |
83 |
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echo |
84 |
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echo "Error building the mpack tools at: $MPACK_DIR" |
85 |
edhill |
1.20 |
echo |
86 |
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HAVE_MPACK=f |
87 |
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else |
88 |
edhill |
1.25 |
rm -f tr_build_mpack.out |
89 |
edhill |
1.20 |
HAVE_MPACK=t |
90 |
edhill |
1.1 |
fi |
91 |
edhill |
1.20 |
else |
92 |
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HAVE_MPACK=t |
93 |
edhill |
1.1 |
fi |
94 |
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echo "OK" |
95 |
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} |
96 |
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97 |
jmc |
1.93 |
testoutput_var() |
98 |
edhill |
1.1 |
{ |
99 |
jmc |
1.99 |
# testoutput_var dir s1 label subdir reference_output |
100 |
edhill |
1.1 |
# |
101 |
jmc |
1.93 |
# compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE |
102 |
jmc |
1.99 |
# with same output from reference file $dir/results/$reference_output |
103 |
jmc |
1.93 |
# using search strings s1 and text label |
104 |
edhill |
1.1 |
|
105 |
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if [ $debug -gt 0 ]; then |
106 |
jmc |
1.93 |
echo testoutput_var: grep "$2" $1/$4/$OUTPUTFILE 1>&2 |
107 |
edhill |
1.1 |
fi |
108 |
jmc |
1.87 |
if [ -r $1/$4/$OUTPUTFILE ]; then |
109 |
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grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | cat -n > tmp1.txt |
110 |
jmc |
1.67 |
lncntA=`wc -l tmp1.txt | awk '{print $1}' ` |
111 |
jmc |
1.100 |
if [ $lncntA -lt 2 ]; then |
112 |
edhill |
1.1 |
if [ $verbose -gt 0 ]; then |
113 |
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echo Not enough lines of output when searching for "$2" 1>&2 |
114 |
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fi |
115 |
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return 99 |
116 |
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fi |
117 |
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else |
118 |
jmc |
1.93 |
echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2 |
119 |
edhill |
1.1 |
return 99 |
120 |
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fi |
121 |
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if [ $debug -gt 0 ]; then |
122 |
jmc |
1.99 |
echo testoutput_var: grep "$2" $1/results/$5 1>&2 |
123 |
edhill |
1.1 |
fi |
124 |
jmc |
1.99 |
grep "$2" $1/results/$5 | sed 's/.*=//' | cat -n > tmp2.txt |
125 |
jmc |
1.67 |
lncntB=`wc -l tmp2.txt | awk '{print $1}' ` |
126 |
jmc |
1.100 |
if [ $lncntB -lt 2 ]; then |
127 |
edhill |
1.1 |
if [ $verbose -gt 0 ]; then |
128 |
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echo Not enough lines of output when searching for "$2" 1>&2 |
129 |
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fi |
130 |
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return 99 |
131 |
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fi |
132 |
jmc |
1.67 |
if [ $lncntA -ne $lncntB ]; then |
133 |
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if [ $verbose -gt 0 ]; then |
134 |
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echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2 |
135 |
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fi |
136 |
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return 99 |
137 |
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fi |
138 |
edhill |
1.72 |
has_nan=`cat tmp1.txt | grep -i nan | wc -l` |
139 |
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if [ $has_nan -gt 0 ] ; then |
140 |
jmc |
1.93 |
echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2 |
141 |
edhill |
1.72 |
return 99 |
142 |
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fi |
143 |
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has_inf=`cat tmp1.txt | grep -i inf | wc -l` |
144 |
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if [ $has_inf -gt 0 ] ; then |
145 |
jmc |
1.93 |
echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2 |
146 |
jmc |
1.71 |
return 99 |
147 |
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fi |
148 |
edhill |
1.1 |
if [ $debug -gt 0 ]; then |
149 |
jmc |
1.93 |
echo testoutput_var: join tmp1.txt tmp2.txt 1>&2 |
150 |
edhill |
1.1 |
fi |
151 |
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join tmp1.txt tmp2.txt | awk '{print $1 " " $2 " " $3}' > tmp3.txt |
152 |
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if [ $debug -gt 0 ]; then |
153 |
jmc |
1.93 |
echo testoutput_var: compare_lines 1>&2 |
154 |
edhill |
1.1 |
fi |
155 |
edhill |
1.22 |
if [ $verbose -gt 1 ]; then |
156 |
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cat tmp3.txt 1>&2 |
157 |
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fi |
158 |
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echo "-1" >> tmp3.txt |
159 |
edhill |
1.23 |
# On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number |
160 |
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cat tmp3.txt | sed -e 's|:||g' > tmp4.txt |
161 |
jmc |
1.91 |
digits_of_similarity=`./tr_cmpnum < tmp4.txt` |
162 |
edhill |
1.1 |
if [ $digits_of_similarity -eq 99 ]; then |
163 |
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if [ $verbose -gt 0 ]; then |
164 |
jmc |
1.99 |
echo testoutput_var: No comparison was available for \"$3\" 1>&2 |
165 |
edhill |
1.1 |
fi |
166 |
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digits_of_similarity=99 |
167 |
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else |
168 |
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if [ $verbose -gt 0 ]; then |
169 |
jmc |
1.99 |
echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2 |
170 |
edhill |
1.1 |
fi |
171 |
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fi |
172 |
edhill |
1.23 |
rm -f tmp1.txt tmp2.txt tmp3.txt tmp4.txt |
173 |
edhill |
1.1 |
|
174 |
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return $digits_of_similarity |
175 |
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} |
176 |
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177 |
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dashnum() |
178 |
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{ |
179 |
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# dashnum n1 n2 n3 ... |
180 |
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# |
181 |
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# print numbers using %3i format or "--" if number = 99 |
182 |
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183 |
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for num in $@ ; do |
184 |
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if [ $num = 99 ]; then |
185 |
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printf ' --' |
186 |
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else |
187 |
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printf '%3i' $num |
188 |
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fi |
189 |
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done |
190 |
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} |
191 |
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192 |
edhill |
1.49 |
check_for_add_mon_output() |
193 |
|
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{ |
194 |
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# Check for additional types of monitor output |
195 |
|
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if test "x$1" = x ; then |
196 |
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return |
197 |
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fi |
198 |
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|
199 |
edhill |
1.50 |
for ii in $PTRACERS_NUM ; do |
200 |
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eval "HAVE_PTR0"$ii"=f" |
201 |
|
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done |
202 |
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|
203 |
edhill |
1.49 |
ptr_add="trcstat_ptracerXX_min trcstat_ptracerXX_max" |
204 |
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ptr_add="$ptr_add trcstat_ptracerXX_mean trcstat_ptracerXX_sd" |
205 |
edhill |
1.50 |
for ii in $PTRACERS_NUM ; do |
206 |
edhill |
1.49 |
for jj in $ptr_add ; do |
207 |
|
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name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"` |
208 |
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tst=`grep $name $1 | wc -l | awk '{print $1}'` |
209 |
|
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if test ! "x$tst" = x0 ; then |
210 |
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eval "HAVE_PTR0"$ii"=t" |
211 |
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fi |
212 |
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done |
213 |
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# eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' |
214 |
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done |
215 |
|
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} |
216 |
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|
217 |
jmc |
1.93 |
testoutput_run() |
218 |
edhill |
1.1 |
{ |
219 |
jmc |
1.99 |
# testoutput_run directory subdir reference_output |
220 |
edhill |
1.1 |
# |
221 |
jmc |
1.93 |
# test output from 1 run in "directory" |
222 |
jmc |
1.103 |
# --> same processing for adjoint & forward test |
223 |
jmc |
1.94 |
# default list of output variables to be checked: |
224 |
|
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# 1rst : main variable used to decide if it pass or FAIL |
225 |
|
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# others : number of matching digits to be printed in summary.txt |
226 |
|
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listChk=$DEF_CHECK_LIST |
227 |
|
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# load experiment-specific list from file "tr_checklist" (if it exist) |
228 |
|
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if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi |
229 |
|
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sVar=`echo $listChk | awk '{print $1}'` |
230 |
|
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# remove 1rst var and expand the list: + => min max mean s.d |
231 |
jmc |
1.97 |
listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \ |
232 |
|
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| sed 's/+//g' | sed "s/^$sVar//"` |
233 |
jmc |
1.94 |
if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(I)='$listVar'" 1>&2 ; fi |
234 |
|
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for ii in 1 2 3 4 5 6 7 8 9 ; do |
235 |
|
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tst=`eval 'echo "$HAVE_PTR0'$ii'"'` |
236 |
|
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#echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2 |
237 |
|
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if test "x$tst" != xt ; then listVar=`echo "$listVar" | sed "s/ pt$ii..//g"` ; fi |
238 |
|
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done |
239 |
|
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tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){t+=($i==$1)}; print t }'` |
240 |
|
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if test $tst != 1 ; then |
241 |
|
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if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2 |
242 |
|
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else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi |
243 |
|
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echo "==> WARNING: in checked list:" $listVar 1>&2 |
244 |
|
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#- put it back once: |
245 |
|
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listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"` |
246 |
|
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fi |
247 |
|
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if [ $debug -gt 0 ]; then echo "testoutput_run: listVar(M)='$listVar'" 1>&2 ; fi |
248 |
|
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echo "listVar='$listVar'" > $CDIR"/summary.txt" |
249 |
|
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allargs="" |
250 |
|
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for xx in $listVar |
251 |
|
|
do |
252 |
|
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case $xx in |
253 |
|
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'PS') if [ $debug -gt 0 ] |
254 |
|
|
then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi |
255 |
jmc |
1.99 |
testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $3; yy=$? |
256 |
jmc |
1.94 |
if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;; |
257 |
jmc |
1.101 |
'Cost') testoutput_var $1 "ADM precision_derivative_cost" "ADM Cost" $2 $3; yy=$? ;; |
258 |
|
|
'Grad') testoutput_var $1 "ADM precision_derivative_grad" "ADM Grad" $2 $3; yy=$? ;; |
259 |
jmc |
1.99 |
'Tmn') testoutput_var $1 "dynstat_theta_min" "Theta minimum" $2 $3; yy=$? ;; |
260 |
|
|
'Tmx') testoutput_var $1 "dynstat_theta_max" "Theta maximum" $2 $3; yy=$? ;; |
261 |
|
|
'Tav') testoutput_var $1 "dynstat_theta_mean" "Theta mean" $2 $3; yy=$? ;; |
262 |
|
|
'Tsd') testoutput_var $1 "dynstat_theta_sd" "Theta Std.Dev" $2 $3; yy=$? ;; |
263 |
|
|
'Smn') testoutput_var $1 "dynstat_salt_min" "Salt minimum" $2 $3; yy=$? ;; |
264 |
|
|
'Smx') testoutput_var $1 "dynstat_salt_max" "Salt maximum" $2 $3; yy=$? ;; |
265 |
|
|
'Sav') testoutput_var $1 "dynstat_salt_mean" "Salt mean" $2 $3; yy=$? ;; |
266 |
|
|
'Ssd') testoutput_var $1 "dynstat_salt_sd" "Salt Std.Dev" $2 $3; yy=$? ;; |
267 |
jmc |
1.94 |
'Umn') testoutput_var $1 "dynstat_uvel_min" "U minimum" $2 $3; yy=$? ;; |
268 |
|
|
'Umx') testoutput_var $1 "dynstat_uvel_max" "U maximum" $2 $3; yy=$? ;; |
269 |
|
|
'Uav') testoutput_var $1 "dynstat_uvel_mean" "U mean" $2 $3; yy=$? ;; |
270 |
jmc |
1.99 |
'Usd') testoutput_var $1 "dynstat_uvel_sd" "U Std.Dev" $2 $3; yy=$? ;; |
271 |
jmc |
1.94 |
'Vmn') testoutput_var $1 "dynstat_vvel_min" "V minimum" $2 $3; yy=$? ;; |
272 |
|
|
'Vmx') testoutput_var $1 "dynstat_vvel_max" "V maximum" $2 $3; yy=$? ;; |
273 |
|
|
'Vav') testoutput_var $1 "dynstat_vvel_mean" "V mean" $2 $3; yy=$? ;; |
274 |
jmc |
1.99 |
'Vsd') testoutput_var $1 "dynstat_vvel_sd" "V Std.Dev" $2 $3; yy=$? ;; |
275 |
jmc |
1.94 |
'pt1mn'|'pt2mn'|'pt3mn'|'pt4mn'|'pt5mn') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
276 |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_min" "p0"$ii"_min" $2 $3; yy=$? ;; |
277 |
|
|
'pt1mx'|'pt2mx'|'pt3mx'|'pt4mx'|'pt5mx') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
278 |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_max" "p0"$ii"_max" $2 $3; yy=$? ;; |
279 |
|
|
'pt1av'|'pt2av'|'pt3av'|'pt4av'|'pt5av') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
280 |
|
|
testoutput_var $1 "trcstat_ptracer0"$ii"_mean" "p0"$ii"_mean" $2 $3; yy=$? ;; |
281 |
|
|
'pt1sd'|'pt2sd'|'pt3sd'|'pt4sd'|'pt5sd') ii=`echo $xx | sed 's/pt//' | sed 's/..$//'` |
282 |
jmc |
1.99 |
testoutput_var $1 "trcstat_ptracer0"$ii"_sd" "p0"$ii"_StDv" $2 $3; yy=$? ;; |
283 |
jmc |
1.101 |
'Qntmn') testoutput_var $1 "extforcing_qnet_min" "Qnet minimum" $2 $3; yy=$? ;; |
284 |
|
|
'Qntmx') testoutput_var $1 "extforcing_qnet_max" "Qnet maximum" $2 $3; yy=$? ;; |
285 |
|
|
'Qntav') testoutput_var $1 "extforcing_qnet_mean" "Qnet mean" $2 $3; yy=$? ;; |
286 |
|
|
'Qntsd') testoutput_var $1 "extforcing_qnet_sd" "Qnet Std.Dev" $2 $3; yy=$? ;; |
287 |
|
|
'aSImn') testoutput_var $1 "seaice_area_min" "SIce Area min" $2 $3; yy=$? ;; |
288 |
|
|
'aSImx') testoutput_var $1 "seaice_area_max" "SIce Area max" $2 $3; yy=$? ;; |
289 |
|
|
'aSIav') testoutput_var $1 "seaice_area_mean" "SIce Area mean" $2 $3; yy=$? ;; |
290 |
|
|
'aSIsd') testoutput_var $1 "seaice_area_sd" "SIce Area StDv" $2 $3; yy=$? ;; |
291 |
|
|
'hSImn') testoutput_var $1 "seaice_heff_min" "SIce Heff min" $2 $3; yy=$? ;; |
292 |
|
|
'hSImx') testoutput_var $1 "seaice_heff_max" "SIce Hell max" $2 $3; yy=$? ;; |
293 |
|
|
'hSIav') testoutput_var $1 "seaice_heff_mean" "SIce Hell mean" $2 $3; yy=$? ;; |
294 |
|
|
'hSIsd') testoutput_var $1 "seaice_heff_sd" "SIce Hell StDv" $2 $3; yy=$? ;; |
295 |
|
|
'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $3; yy=$? ;; |
296 |
|
|
'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $3; yy=$? ;; |
297 |
|
|
'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $3; yy=$? ;; |
298 |
|
|
'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Global" $2 $3; yy=$? ;; |
299 |
|
|
'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South" $2 $3; yy=$? ;; |
300 |
|
|
'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North" $2 $3; yy=$? ;; |
301 |
jmc |
1.94 |
*) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;; |
302 |
|
|
esac |
303 |
|
|
if test $xx = $sVar |
304 |
|
|
then allargs="$allargs > $yy <" |
305 |
|
|
else allargs="$allargs $yy" |
306 |
|
|
fi |
307 |
|
|
done |
308 |
|
|
|
309 |
|
|
nbVar=`echo $listVar | awk '{print NF}'` |
310 |
jmc |
1.97 |
if [ $nbVar -lt $LEN_CHECK_LIST ] ; then |
311 |
jmc |
1.94 |
#-- fill line (up to standard length) with dot: |
312 |
jmc |
1.97 |
adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'` |
313 |
jmc |
1.94 |
echo $allargs $adNul |
314 |
|
|
else |
315 |
|
|
echo $allargs |
316 |
|
|
fi |
317 |
jmc |
1.103 |
# <-- same processing for adjoint & forward test |
318 |
edhill |
1.1 |
} |
319 |
|
|
|
320 |
|
|
genmakemodel() |
321 |
|
|
{ |
322 |
|
|
# genmakemodel directory |
323 |
edhill |
1.10 |
if test "x$NOGENMAKE" = xt ; then |
324 |
|
|
echo "genmake skipped!" |
325 |
|
|
else |
326 |
edhill |
1.34 |
if test "x$BASH" = x ; then |
327 |
|
|
GENMAKE2="../../../tools/genmake2" |
328 |
|
|
else |
329 |
|
|
GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH" |
330 |
|
|
fi |
331 |
edhill |
1.10 |
( |
332 |
|
|
cd $1; |
333 |
edhill |
1.24 |
command="$GENMAKE2 -ds -m $MAKE" |
334 |
|
|
if test "x$ADM" = x ; then |
335 |
|
|
command="$command --mods=../code" |
336 |
|
|
else |
337 |
|
|
command="$command --mods=../code_ad" |
338 |
|
|
fi |
339 |
edhill |
1.10 |
if test "x$OPTFILE" != xNONE ; then |
340 |
|
|
command="$command --optfile=$OPTFILE" |
341 |
|
|
fi |
342 |
|
|
if test "x$IEEE" != x ; then |
343 |
|
|
command="$command -ieee" |
344 |
|
|
fi |
345 |
edhill |
1.66 |
if test "x$MPI" = xt ; then |
346 |
|
|
command="$command -mpi" |
347 |
|
|
fi |
348 |
ce107 |
1.90 |
if test "x$TS" = xt ; then |
349 |
|
|
command="$command -ts" |
350 |
|
|
fi |
351 |
|
|
if test "x$PAPIS" = xt ; then |
352 |
|
|
command="$command -papis" |
353 |
|
|
else |
354 |
|
|
if test "x$PCLS" = xt ; then |
355 |
|
|
command="$command -pcls" |
356 |
|
|
fi |
357 |
|
|
fi |
358 |
edhill |
1.10 |
printf 'genmake ... ' 1>&2 |
359 |
|
|
$command > make.log 2>&1 |
360 |
|
|
RETVAL=$? |
361 |
edhill |
1.44 |
# Reduce the size of the testing emails! |
362 |
edhill |
1.47 |
head -100 Makefile > $CDIR/Makefile_head |
363 |
edhill |
1.10 |
if test "x$RETVAL" != x0 ; then |
364 |
|
|
tail make.log |
365 |
|
|
echo "genmakemodel: genmake failed" 1>&2 |
366 |
edhill |
1.21 |
cp genmake_* make.log $CDIR |
367 |
edhill |
1.10 |
return 1 |
368 |
|
|
else |
369 |
edhill |
1.20 |
echo "successful" 1>&2 |
370 |
edhill |
1.1 |
fi |
371 |
edhill |
1.10 |
) |
372 |
|
|
fi |
373 |
edhill |
1.1 |
} |
374 |
|
|
|
375 |
|
|
makeclean() |
376 |
|
|
{ |
377 |
|
|
# makeclean directory |
378 |
edhill |
1.10 |
if test "x$NOCLEAN" = xt ; then |
379 |
jmc |
1.83 |
echo "make Clean skipped!" |
380 |
edhill |
1.10 |
else |
381 |
|
|
( |
382 |
|
|
cd $1; |
383 |
jmc |
1.87 |
#if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi |
384 |
edhill |
1.10 |
if test -r Makefile ; then |
385 |
jmc |
1.83 |
printf 'clean build-dir: make Clean ... ' 2>&1 |
386 |
|
|
$MAKE Clean >> make.log 2>&1 |
387 |
edhill |
1.10 |
RETVAL=$? |
388 |
|
|
if test "x$RETVAL" != x0 ; then |
389 |
|
|
tail make.log |
390 |
jmc |
1.83 |
echo "makeclean: \"make Clean\" failed" 1>&2 |
391 |
edhill |
1.10 |
cp make.log $CDIR"/make.log" |
392 |
|
|
return 1 |
393 |
|
|
fi |
394 |
|
|
fi |
395 |
edhill |
1.20 |
echo successful 1>&2 |
396 |
edhill |
1.10 |
exit 0 |
397 |
|
|
) |
398 |
|
|
fi |
399 |
|
|
} |
400 |
|
|
|
401 |
jmc |
1.83 |
run_clean() |
402 |
edhill |
1.68 |
{ |
403 |
jmc |
1.83 |
# run_clean directory |
404 |
|
|
if test "x$NOCLEAN" = xt ; then |
405 |
|
|
echo "run_clean skipped!" |
406 |
|
|
else |
407 |
edhill |
1.68 |
( |
408 |
|
|
cd $1; |
409 |
jmc |
1.83 |
printf 'clean run-dir ... ' 2>&1 |
410 |
|
|
# part of what is done after "make clean" when doing "make CLEAN" |
411 |
|
|
find . -name "*.meta" -exec rm {} \; |
412 |
|
|
find . -name "*.data" -exec rm {} \; |
413 |
|
|
find . -name "fort.*" -exec rm {} \; |
414 |
|
|
find . -type l -exec rm {} \; |
415 |
|
|
rm -f $EXECUTABLE *.txt STD* *diagnostics.log datetime |
416 |
|
|
rm -rf mnc_test_* |
417 |
jmc |
1.107 |
rm -f *_MIT_CE_000.opt0000 costfunction*0000 |
418 |
jmc |
1.83 |
echo successful 1>&2 |
419 |
edhill |
1.68 |
exit 0 |
420 |
|
|
) |
421 |
|
|
fi |
422 |
|
|
} |
423 |
|
|
|
424 |
edhill |
1.10 |
makedependmodel() |
425 |
|
|
{ |
426 |
|
|
# makedependmodel directory |
427 |
|
|
if test "x$NODEPEND" = xt ; then |
428 |
|
|
echo "make depend skipped!" |
429 |
|
|
else |
430 |
|
|
( |
431 |
|
|
cd $1; |
432 |
|
|
printf 'make depend ... ' 1>&2 |
433 |
|
|
$MAKE depend >> make.log 2>&1 |
434 |
edhill |
1.1 |
RETVAL=$? |
435 |
|
|
if test "x$RETVAL" != x0 ; then |
436 |
|
|
tail make.log |
437 |
edhill |
1.10 |
echo "makedependmodel: make depend failed" 1>&2 |
438 |
edhill |
1.1 |
cp make.log $CDIR"/make.log" |
439 |
|
|
return 1 |
440 |
edhill |
1.10 |
else |
441 |
edhill |
1.20 |
echo successful 1>&2 |
442 |
edhill |
1.1 |
fi |
443 |
edhill |
1.10 |
) |
444 |
|
|
fi |
445 |
edhill |
1.1 |
} |
446 |
|
|
|
447 |
|
|
makemodel() |
448 |
|
|
{ |
449 |
|
|
# makemodel directory |
450 |
|
|
( |
451 |
|
|
cd $1; |
452 |
|
|
if test -r Makefile ; then |
453 |
|
|
printf 'make ... ' 1>&2 |
454 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
455 |
edhill |
1.43 |
if test "x$JOBS" = x ; then |
456 |
|
|
$MAKE >> make.log 2>&1 |
457 |
|
|
else |
458 |
|
|
$MAKE -j $JOBS >> make.log 2>&1 |
459 |
|
|
fi |
460 |
edhill |
1.24 |
else |
461 |
|
|
$MAKE adall >> make.log 2>&1 |
462 |
|
|
fi |
463 |
edhill |
1.1 |
RETVAL=$? |
464 |
|
|
if test "x$RETVAL" != x0 ; then |
465 |
|
|
tail make.log |
466 |
|
|
echo failed 1>&2 |
467 |
|
|
cp make.log $CDIR"/make.log" |
468 |
|
|
return 1 |
469 |
|
|
else |
470 |
edhill |
1.20 |
echo successful 1>&2 |
471 |
edhill |
1.1 |
fi |
472 |
|
|
fi |
473 |
|
|
) |
474 |
|
|
} |
475 |
|
|
|
476 |
edhill |
1.27 |
symlink_mpifiles() |
477 |
|
|
{ |
478 |
|
|
# Put special links so that MPI specific files are used |
479 |
|
|
# This MUST be invoked between makeclean and makelinks because |
480 |
|
|
# the Makefile will link to non-mpi files by default |
481 |
|
|
|
482 |
|
|
dir=$1 |
483 |
|
|
code_dir=$2 |
484 |
|
|
BUILD_DIR=$dir/$3 |
485 |
|
|
CODE_DIR=$dir/$code_dir |
486 |
edhill |
1.45 |
|
487 |
edhill |
1.27 |
# These are files that should replace their counter-part when using -mpi |
488 |
|
|
MPI_FILES=`(cd $CODE_DIR; find . -name "*_mpi")` |
489 |
|
|
|
490 |
|
|
# Is this an MPI run? |
491 |
|
|
if test "x$MPI" = xt ; then |
492 |
|
|
# YES: We symbolically link these files to the build |
493 |
|
|
# dir so long as there is no real file in place |
494 |
|
|
for ii in $MPI_FILES ; do |
495 |
|
|
i=`echo $ii | sed 's:^\./::'` |
496 |
|
|
name=`echo $i | sed 's:_mpi::' ` |
497 |
|
|
cmp $CODE_DIR/$i $BUILD_DIR/$name > /dev/null 2>&1 |
498 |
|
|
RETVAL=$? |
499 |
|
|
if test "x$RETVAL" != x0 ; then |
500 |
|
|
if ! test -f $BUILD_DIR/$i ; then |
501 |
edhill |
1.45 |
#echo Linking $name to $i |
502 |
edhill |
1.27 |
(cd $BUILD_DIR; ln -sf ../$code_dir/$i $name) |
503 |
|
|
fi |
504 |
|
|
fi |
505 |
|
|
done |
506 |
|
|
else |
507 |
edhill |
1.45 |
# NO: We undo any _mpi symbolically linked files |
508 |
edhill |
1.27 |
for ii in $MPI_FILES ; do |
509 |
|
|
i=`echo $ii | sed 's:^\./::'` |
510 |
|
|
name=`echo $i | sed 's:_mpi::' ` |
511 |
|
|
if test -L $BUILD_DIR/$name ; then |
512 |
edhill |
1.45 |
cmp $BUILD_DIR/$name "../$code_dir/$name"_mpi > /dev/null 2>&1 |
513 |
|
|
RETVAL=$? |
514 |
|
|
if test "x$RETVAL" = x0 ; then |
515 |
|
|
#echo Un-linking $name from $linktarg |
516 |
edhill |
1.27 |
rm -f $BUILD_DIR/$name |
517 |
|
|
fi |
518 |
|
|
fi |
519 |
|
|
done |
520 |
|
|
fi |
521 |
|
|
|
522 |
|
|
} |
523 |
|
|
|
524 |
edhill |
1.1 |
linkdata() |
525 |
|
|
{ |
526 |
jmc |
1.83 |
# linkdata run_dir input_dir_1 input_dir_2 ... |
527 |
edhill |
1.1 |
# |
528 |
|
|
# symbolically link data files to run directory |
529 |
jmc |
1.83 |
if test -d $1 ; then |
530 |
edhill |
1.12 |
( |
531 |
jmc |
1.83 |
cd $1 ; shift |
532 |
|
|
if test -r "../"$1"/eedata.mth" ; then |
533 |
|
|
# found eedata.mth in 1rst input dir and it is readable |
534 |
|
|
if test "x$MULTI_THREAD" = "xt" ; then |
535 |
|
|
# multi-threaded test: remove symbolic link & link eedata.mth |
536 |
|
|
if test -h eedata ; then rm -f eedata ; fi |
537 |
|
|
if test ! -r eedata ; then |
538 |
|
|
ln -sf "../"$1"/eedata.mth" eedata ; |
539 |
|
|
printf 'eedata.mth ' 1>&2 |
540 |
edhill |
1.24 |
fi |
541 |
jmc |
1.83 |
else |
542 |
|
|
# not multi-threaded test: remove eedata symbolic link |
543 |
|
|
if test -h eedata ; then rm -f eedata ; fi |
544 |
|
|
fi |
545 |
|
|
fi |
546 |
|
|
for ldir in $* ; do |
547 |
|
|
if test -d "../"$ldir ; then |
548 |
|
|
printf 'ldir='${ldir} 1>&2 |
549 |
|
|
files=`( cd "../"$ldir ; ls -1 | grep -v CVS )` |
550 |
|
|
for i in $files ; do |
551 |
|
|
if test ! -d "../"$ldir/$i ; then |
552 |
|
|
if test ! -r $i ; then |
553 |
|
|
printf ' '$i 1>&2 |
554 |
|
|
ln -sf "../"$ldir"/"$i $i |
555 |
|
|
fi |
556 |
|
|
fi |
557 |
|
|
done |
558 |
|
|
if test -x "../"$ldir"/"prepare_run ; then |
559 |
|
|
"../"$ldir"/"prepare_run |
560 |
edhill |
1.24 |
fi |
561 |
jmc |
1.83 |
printf ' ; ' 1>&2 |
562 |
jmc |
1.82 |
fi |
563 |
jmc |
1.83 |
done |
564 |
edhill |
1.12 |
) |
565 |
edhill |
1.1 |
fi |
566 |
|
|
} |
567 |
|
|
|
568 |
|
|
runmodel() |
569 |
|
|
{ |
570 |
edhill |
1.6 |
# runmodel directory |
571 |
edhill |
1.1 |
# |
572 |
edhill |
1.24 |
# runs "$COMMAND in "directory" |
573 |
edhill |
1.6 |
# (where "$COMMAND" is relative to "directory") |
574 |
edhill |
1.1 |
( |
575 |
|
|
cd $1 |
576 |
jmc |
1.75 |
printf 'runmodel in %s ...' $1 1>&2 |
577 |
edhill |
1.6 |
# make output.txt |
578 |
edhill |
1.38 |
echo |
579 |
jmc |
1.106 |
if test -L $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
580 |
|
|
diff -q $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1 |
581 |
|
|
outD=$? ; if test $outD != 0 ; then rm -f $EXECUTABLE ; rm -f run.log ; fi |
582 |
|
|
fi |
583 |
jmc |
1.83 |
if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then |
584 |
jmc |
1.88 |
echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_00 |
585 |
jmc |
1.83 |
ln -sf "../"$builddir"/"$EXECUTABLE . |
586 |
|
|
fi |
587 |
|
|
if test ! -x $EXECUTABLE ; then |
588 |
jmc |
1.88 |
rm -f run.log ; touch run.log |
589 |
|
|
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
590 |
jmc |
1.83 |
echo " no executable:" $EXECUTABLE >> run.log |
591 |
|
|
RETVAL=8 |
592 |
jmc |
1.88 |
ENDVAL=-1 |
593 |
jmc |
1.75 |
else |
594 |
jmc |
1.98 |
if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then |
595 |
|
|
# output do not exist or is older than executable: |
596 |
jmc |
1.88 |
rm -f run.log ; touch run.log |
597 |
|
|
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
598 |
jmc |
1.83 |
( eval $COMMAND ) >> run.log 2>&1 |
599 |
|
|
RETVAL=$? |
600 |
|
|
else |
601 |
|
|
RETVAL=0 |
602 |
jmc |
1.88 |
if test -f run.log ; then |
603 |
|
|
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
604 |
|
|
echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1 |
605 |
|
|
else |
606 |
|
|
touch run.log |
607 |
|
|
if test -f run.log_00 ; then cat run.log_00 >> run.log ; fi |
608 |
|
|
echo "---------->> $OUTPUTFILE is up to date " >> run.log 2>&1 |
609 |
|
|
echo " no previous run.log: assume NORMAL END" >> run.log 2>&1 |
610 |
|
|
fi |
611 |
jmc |
1.83 |
fi |
612 |
jmc |
1.88 |
ENDVAL=`cat run.log | grep -v 'ABNORMAL END' | grep -c 'NORMAL END'` |
613 |
jmc |
1.75 |
fi |
614 |
jmc |
1.88 |
rm -f run.log_00 |
615 |
|
|
#if test "x$RETVAL" = x0 ; then |
616 |
|
|
if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then |
617 |
jmc |
1.46 |
tail run.log |
618 |
edhill |
1.20 |
echo successful 1>&2 |
619 |
edhill |
1.44 |
# === Reduce the size of the testing emails! |
620 |
jmc |
1.87 |
#cp $OUTPUTFILE $CDIR"/"$OUTPUTFILE |
621 |
jmc |
1.48 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
622 |
edhill |
1.6 |
return 0 |
623 |
|
|
else |
624 |
edhill |
1.20 |
tail run.log |
625 |
jmc |
1.88 |
echo failed '(run:' $RETVAL ' end:' $ENDVAL ')' 1>&2 |
626 |
edhill |
1.20 |
cp run.log $CDIR"/run.log" |
627 |
jmc |
1.48 |
if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi |
628 |
edhill |
1.6 |
return 1 |
629 |
edhill |
1.1 |
fi |
630 |
|
|
) |
631 |
|
|
} |
632 |
|
|
|
633 |
|
|
createcodelet() |
634 |
|
|
{ |
635 |
|
|
# create codelet for comparing model output |
636 |
|
|
|
637 |
edhill |
1.34 |
printf "creating the comparison code... " |
638 |
jmc |
1.91 |
cat > tr_cmpnum.c <<EOF |
639 |
edhill |
1.22 |
#include <stdio.h> |
640 |
|
|
#include <math.h> |
641 |
|
|
int main( int argc, char** argv ) { |
642 |
jmc |
1.91 |
int linnum,cmplin,best,lncnt; |
643 |
edhill |
1.52 |
double a,b,abave,relerr; |
644 |
jmc |
1.57 |
best = -22; |
645 |
adcroft |
1.33 |
lncnt = 0; |
646 |
jmc |
1.96 |
while( 1 & ( (lncnt+=1) < 999 ) ) { |
647 |
edhill |
1.22 |
scanf("%d", &linnum); |
648 |
|
|
if (linnum == -1) break; |
649 |
|
|
scanf("%lf", &a); scanf("%lf", &b); |
650 |
edhill |
1.52 |
abave = 0.5*(fabs(a)+fabs(b)); |
651 |
jmc |
1.91 |
if ( abave == abave ) { |
652 |
|
|
if (abave > 0.0) { |
653 |
|
|
relerr=fabs(a-b)/abave; |
654 |
|
|
if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); } |
655 |
|
|
else { cmplin = -16 ; } |
656 |
|
|
best = (best > cmplin) ? best : cmplin; } |
657 |
|
|
else { cmplin = -22 ; } |
658 |
|
|
/* printf("%d ; %lf ; %lf\n",cmplin,a,b); */ |
659 |
|
|
} |
660 |
|
|
else { |
661 |
|
|
/* printf("%lf ; %lf ; %lf\n",abave,a,b); */ |
662 |
|
|
break; } |
663 |
edhill |
1.22 |
} |
664 |
adcroft |
1.33 |
if (lncnt == 999) best=-29; |
665 |
jmc |
1.91 |
if (linnum != -1) best=-99; |
666 |
edhill |
1.22 |
printf("%d\n", -best); |
667 |
|
|
return 0; |
668 |
|
|
} |
669 |
|
|
EOF |
670 |
jmc |
1.91 |
$CC -o tr_cmpnum tr_cmpnum.c -lm |
671 |
edhill |
1.1 |
|
672 |
jmc |
1.91 |
if [ -x ./tr_cmpnum ]; then |
673 |
edhill |
1.1 |
echo "OK" |
674 |
|
|
return 0 |
675 |
|
|
else |
676 |
|
|
echo |
677 |
edhill |
1.58 |
echo "ERROR: failed to compile comparison code -- please specify" |
678 |
|
|
echo " a C compiler using the CC environment variable." |
679 |
edhill |
1.1 |
exit 1 |
680 |
|
|
fi |
681 |
|
|
} |
682 |
|
|
|
683 |
|
|
formatresults() |
684 |
|
|
{ |
685 |
|
|
# formatresults expt genmake depend make run results* |
686 |
|
|
|
687 |
|
|
nm=$1 |
688 |
|
|
printf '%s %s %s %s' $2 $3 $4 $5 |
689 |
|
|
shift; shift; shift; shift; shift; |
690 |
jmc |
1.94 |
listPrt=$@ |
691 |
|
|
listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'` |
692 |
|
|
xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'` |
693 |
jmc |
1.97 |
printf '%3s' $listPrt |
694 |
jmc |
1.98 |
# line below does not work on hp-ux_ia64 : do those substitutions later on |
695 |
jmc |
1.95 |
# printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' |
696 |
edhill |
1.1 |
|
697 |
jmc |
1.94 |
if [ $xx = '..' ]; then |
698 |
|
|
printf ' N/O ' |
699 |
|
|
elif [ $xx = '--' ]; then |
700 |
|
|
printf ' N/O ' |
701 |
|
|
elif [ $xx = 99 ]; then |
702 |
edhill |
1.1 |
printf ' N/O ' |
703 |
|
|
else |
704 |
jmc |
1.94 |
if [ $xx -ge $MATCH_CRIT ]; then |
705 |
edhill |
1.1 |
printf ' pass' |
706 |
|
|
else |
707 |
|
|
printf ' FAIL' |
708 |
|
|
fi |
709 |
|
|
fi |
710 |
|
|
printf ' %s' $nm |
711 |
|
|
printf '\n' |
712 |
|
|
|
713 |
|
|
} |
714 |
|
|
|
715 |
|
|
scandirs() |
716 |
|
|
{ |
717 |
jmc |
1.81 |
if [ $# -eq 1 ]; then |
718 |
|
|
for arg in * ; do |
719 |
jmc |
1.99 |
test -f $arg/$1 && echo $arg |
720 |
jmc |
1.81 |
done |
721 |
edhill |
1.1 |
else |
722 |
jmc |
1.81 |
echo $* |
723 |
edhill |
1.1 |
fi |
724 |
|
|
} |
725 |
|
|
|
726 |
|
|
|
727 |
|
|
############################################################################### |
728 |
|
|
|
729 |
|
|
|
730 |
|
|
# Default properties |
731 |
|
|
debug=0 |
732 |
|
|
verbose=1 |
733 |
|
|
clean=0 |
734 |
|
|
expts='' |
735 |
edhill |
1.6 |
# ieee=1 |
736 |
edhill |
1.10 |
|
737 |
edhill |
1.40 |
IEEE=true |
738 |
edhill |
1.10 |
if test "x$MITGCM_IEEE" != x ; then |
739 |
|
|
IEEE=$MITGCM_IEEE |
740 |
|
|
fi |
741 |
|
|
|
742 |
|
|
|
743 |
|
|
CLEANUP=f |
744 |
|
|
QUICK=f |
745 |
|
|
NOGENMAKE=f |
746 |
|
|
NOCLEAN=f |
747 |
|
|
NODEPEND=f |
748 |
edhill |
1.68 |
POSTCLEAN=f |
749 |
edhill |
1.1 |
|
750 |
edhill |
1.4 |
BASH= |
751 |
edhill |
1.10 |
OPTFILE=NONE |
752 |
|
|
ADDRESSES= |
753 |
edhill |
1.1 |
TESTDIRS= |
754 |
jmc |
1.89 |
SKIPDIRS= |
755 |
edhill |
1.1 |
MPACKDIR="../tools/mpack-1.6" |
756 |
edhill |
1.20 |
HAVE_MPACK= |
757 |
edhill |
1.1 |
MPACK="$MPACKDIR/mpack" |
758 |
edhill |
1.24 |
COMMAND= |
759 |
edhill |
1.59 |
if test "x$MAKE" = x ; then |
760 |
|
|
MAKE=make |
761 |
|
|
fi |
762 |
|
|
if test "x$CC" = x ; then |
763 |
|
|
CC=cc |
764 |
|
|
fi |
765 |
edhill |
1.43 |
JOBS= |
766 |
edhill |
1.7 |
MPI=f |
767 |
jmc |
1.83 |
MULTI_THREAD=f |
768 |
jmc |
1.70 |
OUTDIR= |
769 |
edhill |
1.40 |
DELDIR= |
770 |
edhill |
1.1 |
|
771 |
edhill |
1.24 |
ADM= |
772 |
|
|
|
773 |
edhill |
1.49 |
# Additional monitor types |
774 |
edhill |
1.50 |
PTRACERS_NUM="1 2 3 4 5" |
775 |
edhill |
1.49 |
|
776 |
jmc |
1.92 |
MATCH_CRIT=13 |
777 |
|
|
|
778 |
edhill |
1.34 |
printf "parsing options... " |
779 |
edhill |
1.1 |
|
780 |
|
|
ac_prev= |
781 |
|
|
for ac_option ; do |
782 |
|
|
|
783 |
|
|
# If the previous option needs an argument, assign it. |
784 |
|
|
if test -n "$ac_prev"; then |
785 |
|
|
eval "$ac_prev=\$ac_option" |
786 |
|
|
ac_prev= |
787 |
|
|
continue |
788 |
|
|
fi |
789 |
|
|
|
790 |
|
|
ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'` |
791 |
|
|
|
792 |
|
|
case $ac_option in |
793 |
|
|
|
794 |
|
|
-help | --help | -h | --h) |
795 |
|
|
usage ;; |
796 |
|
|
|
797 |
edhill |
1.2 |
-optfile | --optfile | -of | --of) |
798 |
edhill |
1.10 |
ac_prev=OPTFILE ;; |
799 |
edhill |
1.2 |
-optfile=* | --optfile=* | -of=* | --of=*) |
800 |
edhill |
1.10 |
OPTFILE=$ac_optarg ;; |
801 |
edhill |
1.1 |
|
802 |
|
|
-addr | --addr | -a | --a) |
803 |
|
|
ac_prev=ADDRESSES ;; |
804 |
|
|
-addr=* | --addr=*) |
805 |
|
|
ADDRESSES=$ac_optarg ;; |
806 |
|
|
|
807 |
|
|
-tdir | --tdir | -t | --t) |
808 |
|
|
ac_prev=TESTDIRS ;; |
809 |
|
|
-tdir=* | --tdir=*) |
810 |
|
|
TESTDIRS=$ac_optarg ;; |
811 |
edhill |
1.4 |
|
812 |
jmc |
1.89 |
-skipdir | --skipdir | -skd | --skd) |
813 |
|
|
ac_prev=SKIPDIRS ;; |
814 |
|
|
-skipdir=* | --skipdir=*) |
815 |
|
|
SKIPDIRS=$ac_optarg ;; |
816 |
|
|
|
817 |
edhill |
1.4 |
-bash | --bash | -b | --b) |
818 |
|
|
ac_prev=BASH ;; |
819 |
|
|
-bash=* | --bash=*) |
820 |
|
|
BASH=$ac_optarg ;; |
821 |
edhill |
1.5 |
|
822 |
edhill |
1.6 |
-command | --command | -c | --c) |
823 |
|
|
ac_prev=COMMAND ;; |
824 |
|
|
-command=* | --command=*) |
825 |
|
|
COMMAND=$ac_optarg ;; |
826 |
edhill |
1.8 |
|
827 |
|
|
-make | --make | -m | --m) |
828 |
|
|
ac_prev=MAKE ;; |
829 |
|
|
-make=* | --make=*) |
830 |
|
|
MAKE=$ac_optarg ;; |
831 |
edhill |
1.1 |
|
832 |
jmc |
1.70 |
-odir | --odir) |
833 |
|
|
ac_prev=OUTDIR ;; |
834 |
|
|
-odir=* | --odir=*) |
835 |
|
|
OUTDIR=$ac_optarg ;; |
836 |
|
|
|
837 |
edhill |
1.50 |
-ptracers | --ptracers | -ptr | --ptr) |
838 |
|
|
ac_prev=PTRACERS_NUM ;; |
839 |
|
|
-ptracers=* | --ptracers=* | -ptr=* | --ptr=*) |
840 |
|
|
PTRACERS_NUM=$ac_optarg ;; |
841 |
|
|
|
842 |
jmc |
1.92 |
-match | --match ) ac_prev=MATCH_CRIT ;; |
843 |
|
|
-match=* | --match=* ) MATCH_CRIT=$ac_optarg ;; |
844 |
|
|
|
845 |
edhill |
1.43 |
-j) ac_prev=JOBS ;; |
846 |
|
|
-j=*) JOBS=$ac_optarg ;; |
847 |
|
|
|
848 |
edhill |
1.10 |
-clean | --clean) |
849 |
jmc |
1.69 |
CLEANUP=t ; DELDIR=t ;; |
850 |
edhill |
1.10 |
|
851 |
|
|
-quick | --quick | -q | --q) |
852 |
|
|
QUICK=t ;; |
853 |
|
|
-nogenmake | --nogenmake | -ng | --ng) |
854 |
|
|
NOGENMAKE=t ;; |
855 |
|
|
-noclean | --noclean | -nc | --nc) |
856 |
|
|
NOCLEAN=t ;; |
857 |
|
|
-nodepend | --nodepend | -nd | --nd) |
858 |
|
|
NODEPEND=t ;; |
859 |
|
|
|
860 |
edhill |
1.68 |
-postclean | --postclean | -pc | --pc) |
861 |
|
|
POSTCLEAN=t ;; |
862 |
|
|
|
863 |
edhill |
1.18 |
-mpi) MPI=t ;; |
864 |
edhill |
1.10 |
|
865 |
jmc |
1.83 |
-mth) MULTI_THREAD=t ;; |
866 |
|
|
|
867 |
edhill |
1.24 |
-adm | -ad) ADM=t ;; |
868 |
|
|
|
869 |
edhill |
1.10 |
-ieee) IEEE=true ;; |
870 |
|
|
-noieee) IEEE= ;; |
871 |
|
|
|
872 |
edhill |
1.1 |
-verbose) verbose=2 ;; |
873 |
|
|
-debug) debug=1 ;; |
874 |
|
|
-quiet) verbose=0 ;; |
875 |
|
|
|
876 |
edhill |
1.40 |
-deldir | -dd) DELDIR=t ;; |
877 |
|
|
|
878 |
ce107 |
1.90 |
-ts) TS=t;; |
879 |
|
|
|
880 |
|
|
-papis) PAPIS=t;; |
881 |
|
|
|
882 |
|
|
-pcls) PCL=t;; |
883 |
|
|
|
884 |
edhill |
1.1 |
-*) |
885 |
|
|
echo "Error: unrecognized option: "$ac_option |
886 |
|
|
usage |
887 |
|
|
;; |
888 |
|
|
|
889 |
|
|
*) |
890 |
|
|
echo "Error: unrecognized argument: "$ac_option |
891 |
|
|
usage |
892 |
|
|
;; |
893 |
|
|
|
894 |
|
|
esac |
895 |
|
|
|
896 |
|
|
done |
897 |
|
|
|
898 |
edhill |
1.10 |
if test "x$QUICK" = xt ; then |
899 |
|
|
NOGENMAKE=t |
900 |
|
|
NOCLEAN=t |
901 |
|
|
NODEPEND=t |
902 |
|
|
fi |
903 |
|
|
|
904 |
jmc |
1.99 |
#- setting for forward or ADM testing |
905 |
|
|
if test "x$ADM" = xt ; then |
906 |
|
|
code_dir=code_ad |
907 |
|
|
input_dirs='input_ad input' |
908 |
|
|
ref_outp="output_adm.txt" |
909 |
|
|
EXECUTABLE="mitgcmuv_ad" |
910 |
|
|
else |
911 |
|
|
code_dir=code |
912 |
|
|
input_dirs='input' |
913 |
|
|
ref_outp="output.txt" |
914 |
|
|
EXECUTABLE="mitgcmuv" |
915 |
|
|
fi |
916 |
|
|
|
917 |
edhill |
1.1 |
if test "x$TESTDIRS" = x ; then |
918 |
jmc |
1.103 |
LIST=`scandirs results/$ref_outp` |
919 |
jmc |
1.84 |
else |
920 |
|
|
#- expand group of experiments: |
921 |
|
|
LIST=" " |
922 |
|
|
for xx in $TESTDIRS |
923 |
|
|
do |
924 |
|
|
case $xx in |
925 |
jmc |
1.86 |
'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce" |
926 |
|
|
LIST=${LIST}" lab_sea tutorial_baroclinic_gyre" |
927 |
|
|
LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope" |
928 |
jmc |
1.84 |
;; |
929 |
|
|
'tutorials') |
930 |
|
|
LIST=${LIST}" "`ls | grep 'tutorial_'` ;; |
931 |
|
|
*) LIST=${LIST}" "$xx ;; |
932 |
|
|
esac |
933 |
|
|
done |
934 |
jmc |
1.89 |
fi |
935 |
|
|
#echo 'LIST='${LIST}'<' |
936 |
|
|
#- skip dirs, remove duplicate and non-directory: |
937 |
|
|
TESTDIRS=" " |
938 |
|
|
count=0 |
939 |
|
|
for xx in $LIST |
940 |
|
|
do |
941 |
|
|
yy=`echo $SKIPDIRS | grep -c $xx` |
942 |
|
|
if test $yy = 0 ; then |
943 |
jmc |
1.84 |
if test -d $xx ; then |
944 |
|
|
yy=`echo $TESTDIRS | grep -c $xx` |
945 |
|
|
if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi |
946 |
jmc |
1.89 |
else count=1 ; |
947 |
|
|
echo ""; echo -n " -- skip \"$xx\" (not a directory !)" |
948 |
|
|
fi |
949 |
|
|
else |
950 |
|
|
if test $count = 1 ; then echo -n ", \"$xx\"" |
951 |
|
|
else count=1 ; echo "" ; echo -n " skip: \"$xx\"" |
952 |
jmc |
1.84 |
fi |
953 |
jmc |
1.89 |
fi |
954 |
|
|
done |
955 |
|
|
if test $count = 1 ; then echo "" ; echo -n " ... " ; fi |
956 |
jmc |
1.84 |
#echo 'TESTDIRS='${TESTDIRS}'<' |
957 |
edhill |
1.1 |
|
958 |
edhill |
1.10 |
if test "x$OPTFILE" = xNONE -a "x$MITGCM_OF" != x ; then |
959 |
|
|
OPTFILE=$MITGCM_OF |
960 |
|
|
fi |
961 |
|
|
|
962 |
jmc |
1.99 |
OUTPUTFILE=$ref_outp |
963 |
jmc |
1.87 |
if test "x$COMMAND" = x ; then |
964 |
jmc |
1.77 |
COMMAND="./$EXECUTABLE > $OUTPUTFILE" |
965 |
edhill |
1.24 |
fi |
966 |
jmc |
1.87 |
if test "x$MPI" = xt ; then |
967 |
|
|
OUTPUTFILE="STDOUT.0000" |
968 |
edhill |
1.24 |
fi |
969 |
|
|
|
970 |
jmc |
1.76 |
echo "OK (COMMAND= $COMMAND )" |
971 |
edhill |
1.1 |
|
972 |
jmc |
1.94 |
# set the Default List of output variables to be checked: |
973 |
|
|
# (use default or load experiment-specific list from file "tr_checklist") |
974 |
|
|
# content : 1rst = main variable used to decide if it pass or FAIL |
975 |
|
|
# others = number of matching digits to be printed in summary.txt |
976 |
jmc |
1.99 |
if test "x$ADM" = x ; then |
977 |
jmc |
1.94 |
DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+' |
978 |
|
|
EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..' |
979 |
jmc |
1.97 |
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
980 |
jmc |
1.94 |
ii=`echo $EMPTY_RESULTS | awk '{print NF}'` |
981 |
jmc |
1.97 |
EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'` |
982 |
jmc |
1.99 |
else |
983 |
jmc |
1.103 |
DEF_CHECK_LIST='Grad Cost Grad' |
984 |
jmc |
1.99 |
EMPTY_RESULTS='.. ..' |
985 |
|
|
LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'` |
986 |
jmc |
1.94 |
fi |
987 |
|
|
|
988 |
edhill |
1.1 |
# create the FORTRAN comparison code |
989 |
|
|
createcodelet |
990 |
|
|
|
991 |
|
|
# build the mpack utility |
992 |
edhill |
1.31 |
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
993 |
edhill |
1.32 |
echo "skipping mpack build" |
994 |
|
|
else |
995 |
edhill |
1.31 |
build_mpack |
996 |
|
|
fi |
997 |
edhill |
1.1 |
|
998 |
|
|
# Create a uniquely named directory to store results |
999 |
|
|
MACH=`hostname` |
1000 |
edhill |
1.2 |
UNAMEA=`uname -a` |
1001 |
edhill |
1.1 |
DATE=`date +%Y%m%d` |
1002 |
edhill |
1.25 |
BASE="tr_"$MACH"_"$DATE"_" |
1003 |
jmc |
1.70 |
if test "x$OUTDIR" != x ; then |
1004 |
|
|
BASE="tr_"$OUTDIR"_"$DATE"_" |
1005 |
|
|
fi |
1006 |
edhill |
1.1 |
DNUM=0 |
1007 |
|
|
DRESULTS="$BASE$DNUM" |
1008 |
|
|
while test -e $DRESULTS ; do |
1009 |
|
|
DNUM=$(( $DNUM + 1 )) |
1010 |
|
|
DRESULTS="$BASE$DNUM" |
1011 |
|
|
done |
1012 |
|
|
mkdir $DRESULTS |
1013 |
|
|
RETVAL=$? |
1014 |
|
|
if test "x$RETVAL" != x0 ; then |
1015 |
edhill |
1.20 |
echo "ERROR: Can't create results directory \"./$DRESULTS\"" |
1016 |
edhill |
1.1 |
exit 1 |
1017 |
|
|
fi |
1018 |
|
|
SUMMARY="$DRESULTS/summary.txt" |
1019 |
edhill |
1.34 |
printf "Start time: " >> $SUMMARY |
1020 |
edhill |
1.16 |
start_date=`date` |
1021 |
edhill |
1.17 |
echo $start_date > $SUMMARY |
1022 |
edhill |
1.1 |
|
1023 |
edhill |
1.11 |
of_path= |
1024 |
edhill |
1.10 |
if test "x$OPTFILE" != xNONE ; then |
1025 |
|
|
if test -r $OPTFILE ; then |
1026 |
edhill |
1.11 |
# get the path |
1027 |
|
|
path=${OPTFILE%/*} |
1028 |
|
|
if test "x$path" = x ; then |
1029 |
|
|
of_path=`pwd` |
1030 |
|
|
else |
1031 |
|
|
of_path=`( cd $path > /dev/null 2>&1 ; pwd )` |
1032 |
|
|
fi |
1033 |
|
|
file=${OPTFILE##*/} |
1034 |
|
|
OPTFILE=$of_path/$file |
1035 |
edhill |
1.21 |
cp $OPTFILE $DRESULTS |
1036 |
|
|
echo >> $SUMMARY |
1037 |
|
|
echo " OPTFILE=$OPTFILE" >> $SUMMARY |
1038 |
edhill |
1.11 |
else |
1039 |
edhill |
1.21 |
echo | tee $SUMMARY |
1040 |
|
|
echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee $SUMMARY |
1041 |
|
|
exit 1 |
1042 |
edhill |
1.10 |
fi |
1043 |
edhill |
1.21 |
else |
1044 |
|
|
echo >> $SUMMARY |
1045 |
|
|
echo "No \"OPTFILE\" was explicitly specified by testreport," >> $SUMMARY |
1046 |
|
|
echo " so the genmake default will be used." >> $SUMMARY |
1047 |
edhill |
1.10 |
fi |
1048 |
|
|
echo |
1049 |
|
|
echo >> $SUMMARY |
1050 |
edhill |
1.24 |
if test "x$ADM" = x ; then |
1051 |
jmc |
1.92 |
if [ $MATCH_CRIT -lt 10 ] ; |
1052 |
jmc |
1.94 |
then line_0="default "$MATCH_CRIT ; |
1053 |
|
|
else line_0="default "$MATCH_CRIT ; fi |
1054 |
|
|
line_0="$line_0 ----T----- ----S----- ----U----- ----V-----" |
1055 |
jmc |
1.92 |
# line_0=" ----T----- ----S----- ----U----- ----V-----" |
1056 |
edhill |
1.49 |
line_1="G D M c m s m s m s m s" |
1057 |
|
|
line_2="E p a R g m m e . m m e . m m e . m m e ." |
1058 |
|
|
line_3="N n k u 2 i a a d i a a d i a a d i a a d" |
1059 |
|
|
line_4="2 d e n d n x n . n x n . n x n . n x n ." |
1060 |
edhill |
1.50 |
for ii in $PTRACERS_NUM ; do |
1061 |
edhill |
1.49 |
# tst=`eval 'echo $HAVE_PTR0'$ii` |
1062 |
|
|
# if test "x$tst" = xt ; then |
1063 |
|
|
line_0="$line_0 --PTR 0"$ii"--" |
1064 |
|
|
line_1="$line_1 m s" |
1065 |
|
|
line_2="$line_2 m m e ." |
1066 |
|
|
line_3="$line_3 i a a d" |
1067 |
|
|
line_4="$line_4 n x n ." |
1068 |
|
|
# fi |
1069 |
|
|
done |
1070 |
|
|
echo "$line_0" | tee -a $SUMMARY |
1071 |
|
|
echo "$line_1" | tee -a $SUMMARY |
1072 |
|
|
echo "$line_2" | tee -a $SUMMARY |
1073 |
|
|
echo "$line_3" | tee -a $SUMMARY |
1074 |
|
|
echo "$line_4" | tee -a $SUMMARY |
1075 |
|
|
echo " " | tee -a $SUMMARY |
1076 |
edhill |
1.24 |
else |
1077 |
|
|
echo "ADJOINT=true" >> $SUMMARY |
1078 |
|
|
echo >> $SUMMARY |
1079 |
jmc |
1.100 |
if [ $MATCH_CRIT -lt 10 ] ; |
1080 |
jmc |
1.103 |
then line_0="default "$MATCH_CRIT ; |
1081 |
|
|
else line_0="default "$MATCH_CRIT ; fi |
1082 |
jmc |
1.100 |
echo "$line_0" | tee -a $SUMMARY |
1083 |
edhill |
1.24 |
cat << EOF | tee -a $SUMMARY |
1084 |
|
|
G D M C G |
1085 |
|
|
E p a R o r |
1086 |
|
|
N n k u s a |
1087 |
|
|
2 d e n t d |
1088 |
|
|
|
1089 |
|
|
EOF |
1090 |
|
|
fi |
1091 |
edhill |
1.1 |
|
1092 |
edhill |
1.10 |
# ...and each test directory... |
1093 |
|
|
for dir in $TESTDIRS ; do |
1094 |
|
|
|
1095 |
jmc |
1.106 |
# set builddir & rundir: |
1096 |
|
|
builddir="build" |
1097 |
|
|
if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi |
1098 |
|
|
rundir="run" |
1099 |
|
|
if test ! -d $dir/$rundir ; then |
1100 |
|
|
rundir=$builddir |
1101 |
|
|
fi |
1102 |
|
|
CODE_DIR=$dir/$code_dir |
1103 |
|
|
BUILD_DIR=$dir/$builddir |
1104 |
|
|
|
1105 |
edhill |
1.10 |
# Cleanup only! |
1106 |
|
|
if test "x$CLEANUP" = xt ; then |
1107 |
jmc |
1.106 |
if test -r $BUILD_DIR/Makefile ; then |
1108 |
jmc |
1.83 |
echo ' ------ clean dir:' $dir/build |
1109 |
jmc |
1.106 |
( cd $BUILD_DIR ; make CLEAN ) |
1110 |
edhill |
1.10 |
fi |
1111 |
jmc |
1.106 |
if test -d $dir/$rundir/CVS ; then |
1112 |
|
|
echo ' ------ clean dir:' $dir/$rundir |
1113 |
|
|
run_clean $dir/$rundir |
1114 |
edhill |
1.10 |
fi |
1115 |
edhill |
1.62 |
( |
1116 |
|
|
cd $dir |
1117 |
|
|
rm -rf tr_run.* |
1118 |
|
|
) |
1119 |
edhill |
1.10 |
continue |
1120 |
edhill |
1.1 |
fi |
1121 |
edhill |
1.3 |
|
1122 |
edhill |
1.10 |
# Verify that the testdir exists and contains previous |
1123 |
|
|
# results in the correct location--or skip this directory! |
1124 |
jmc |
1.104 |
fout=$dir"/results/"$ref_outp |
1125 |
edhill |
1.24 |
if test ! -r $fout ; then |
1126 |
|
|
echo "can't read \"$fout\" -- skipping $dir" |
1127 |
edhill |
1.10 |
continue |
1128 |
|
|
fi |
1129 |
edhill |
1.53 |
if test "x$ADM" = x ; then |
1130 |
|
|
check_for_add_mon_output $fout |
1131 |
|
|
fi |
1132 |
edhill |
1.7 |
|
1133 |
edhill |
1.49 |
# Check for additional types of monitor output |
1134 |
|
|
|
1135 |
edhill |
1.30 |
if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" = "xt" ; then |
1136 |
edhill |
1.28 |
echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir" |
1137 |
|
|
continue |
1138 |
|
|
fi |
1139 |
jmc |
1.83 |
if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then |
1140 |
|
|
echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir" |
1141 |
|
|
continue |
1142 |
|
|
fi |
1143 |
|
|
|
1144 |
|
|
# Check whether there are "extra runs" for this testdir |
1145 |
|
|
extra_runs= |
1146 |
|
|
if test "x$ADM" = x ; then |
1147 |
|
|
ex_run_dirs=`( cd $dir ; echo input.* )` |
1148 |
|
|
#echo "ex_run_dirs='$ex_run_dirs'" |
1149 |
|
|
for exd in $ex_run_dirs ; do |
1150 |
|
|
name=`echo $exd | sed -e 's/input.//g'` |
1151 |
jmc |
1.85 |
outf="$dir/results/output.$name.txt" |
1152 |
jmc |
1.83 |
if test -f $outf -a -r $outf ; then |
1153 |
|
|
if test "x$MULTI_THREAD" = "xt" ; then |
1154 |
|
|
if test -r $dir"/"$exd"/eedata.mth" ; then |
1155 |
|
|
extra_runs="$extra_runs $name" |
1156 |
|
|
#else echo $dir"/"$exd"/eedata.mth: not found" |
1157 |
|
|
fi |
1158 |
|
|
else |
1159 |
|
|
extra_runs="$extra_runs $name" |
1160 |
|
|
fi |
1161 |
|
|
fi |
1162 |
|
|
done |
1163 |
|
|
fi |
1164 |
edhill |
1.28 |
|
1165 |
|
|
echo "-------------------------------------------------------------------------------" |
1166 |
|
|
echo |
1167 |
jmc |
1.83 |
if test "x$extra_runs" = "x" ; then |
1168 |
|
|
echo "Experiment: $dir" |
1169 |
|
|
else |
1170 |
|
|
echo "Experiment: $dir ; extra_runs=$extra_runs" |
1171 |
|
|
fi |
1172 |
edhill |
1.28 |
echo |
1173 |
|
|
unset genmake makedepend make run |
1174 |
jmc |
1.94 |
results=$EMPTY_RESULTS |
1175 |
edhill |
1.10 |
|
1176 |
|
|
# Create an output dir for each OPTFILE/tdir combination |
1177 |
edhill |
1.20 |
rel_CDIR=$DRESULTS"/"$dir |
1178 |
|
|
mkdir $rel_CDIR |
1179 |
|
|
CDIR=`pwd`"/$rel_CDIR" |
1180 |
edhill |
1.10 |
|
1181 |
|
|
if test "x$CLEANUP" = xt ; then |
1182 |
jmc |
1.83 |
echo '====>>> this is to check that we never go through this part <<< ===' |
1183 |
|
|
makeclean $dir/$builddir \ |
1184 |
|
|
&& run_clean $dir/$rundir |
1185 |
edhill |
1.10 |
else |
1186 |
edhill |
1.1 |
genmakemodel $dir/$builddir && genmake=Y \ |
1187 |
|
|
&& makeclean $dir/$builddir \ |
1188 |
jmc |
1.83 |
&& run_clean $dir/$rundir \ |
1189 |
edhill |
1.27 |
&& symlink_mpifiles $dir $code_dir $builddir \ |
1190 |
edhill |
1.1 |
&& makedependmodel $dir/$builddir && makedepend=Y \ |
1191 |
|
|
&& makemodel $dir/$builddir && make=Y \ |
1192 |
jmc |
1.83 |
&& linkdata $dir/$rundir $input_dirs \ |
1193 |
edhill |
1.12 |
&& runmodel $dir/$rundir && run=Y \ |
1194 |
jmc |
1.99 |
&& results=`testoutput_run $dir $rundir $ref_outp` |
1195 |
edhill |
1.10 |
fi |
1196 |
|
|
|
1197 |
|
|
echo |
1198 |
jmc |
1.103 |
# --> same processing for adjoint & forward test |
1199 |
edhill |
1.24 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1200 |
edhill |
1.34 |
echo |
1201 |
jmc |
1.98 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1202 |
jmc |
1.100 |
touch $CDIR"/summary.txt" |
1203 |
jmc |
1.97 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1204 |
edhill |
1.34 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1205 |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1206 |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1207 |
|
|
echo "tdir='$dir'" >> $CDIR"/summary.txt" |
1208 |
|
|
|
1209 |
|
|
for ex in $extra_runs ; do |
1210 |
jmc |
1.73 |
unset run |
1211 |
jmc |
1.94 |
results=$EMPTY_RESULTS |
1212 |
jmc |
1.106 |
# reference output file |
1213 |
|
|
refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"` |
1214 |
jmc |
1.73 |
# Create an output dir for each OPTFILE/tdir.ex combination |
1215 |
|
|
rel_CDIR=$DRESULTS"/"$dir"."$ex |
1216 |
|
|
mkdir $rel_CDIR |
1217 |
|
|
CDIR=`pwd`"/$rel_CDIR" |
1218 |
edhill |
1.61 |
test ! -e "$dir/tr_run.$ex" && mkdir "$dir/tr_run.$ex" |
1219 |
jmc |
1.106 |
run_clean $dir/tr_run.$ex |
1220 |
|
|
linkdata $dir/tr_run.$ex input.$ex input |
1221 |
jmc |
1.42 |
runmodel $dir/tr_run.$ex && run=Y \ |
1222 |
jmc |
1.106 |
&& results=`testoutput_run $dir tr_run.$ex $refExOut` |
1223 |
edhill |
1.34 |
fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results` |
1224 |
|
|
fres="$fres.$ex" |
1225 |
|
|
echo |
1226 |
jmc |
1.100 |
echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY |
1227 |
|
|
touch $CDIR"/summary.txt" |
1228 |
jmc |
1.97 |
echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $CDIR"/summary.txt" |
1229 |
edhill |
1.34 |
echo "MACH='$MACH'" >> $CDIR"/summary.txt" |
1230 |
|
|
echo "UNAMEA='$UNAMEA'" >> $CDIR"/summary.txt" |
1231 |
|
|
echo "DATE='$DATE'" >> $CDIR"/summary.txt" |
1232 |
jmc |
1.73 |
echo "tdir='$dir.$ex'" >> $CDIR"/summary.txt" |
1233 |
jmc |
1.83 |
if test "x$POSTCLEAN" = xt ; then |
1234 |
jmc |
1.100 |
run_clean $dir/tr_run.$ex |
1235 |
jmc |
1.83 |
fi |
1236 |
edhill |
1.34 |
done |
1237 |
jmc |
1.103 |
# <-- same processing for adjoint & forward test |
1238 |
jmc |
1.99 |
if test "x$ADM" = xt ; then |
1239 |
jmc |
1.105 |
head -1 $dir/$builddir/taf_ad.log >> $CDIR"/summary.txt" |
1240 |
jmc |
1.100 |
grep -A3 'Seconds in section "ALL' $dir/$rundir/$OUTPUTFILE \ |
1241 |
jmc |
1.77 |
>> $CDIR"/summary.txt" |
1242 |
edhill |
1.24 |
fi |
1243 |
edhill |
1.68 |
|
1244 |
jmc |
1.83 |
#postclean $dir/$builddir |
1245 |
|
|
if test "x$POSTCLEAN" = xt ; then |
1246 |
|
|
makeclean $dir/$builddir \ |
1247 |
|
|
&& run_clean $dir/$rundir |
1248 |
|
|
fi |
1249 |
edhill |
1.10 |
|
1250 |
|
|
echo "-------------------------------------------------------------------------------" |
1251 |
|
|
|
1252 |
edhill |
1.1 |
done |
1253 |
|
|
|
1254 |
edhill |
1.34 |
printf "Start time: " >> $SUMMARY |
1255 |
edhill |
1.16 |
echo $start_date >> $SUMMARY |
1256 |
edhill |
1.34 |
printf "End time: " >> $SUMMARY |
1257 |
edhill |
1.13 |
date >> $SUMMARY |
1258 |
edhill |
1.20 |
|
1259 |
|
|
# If addresses were supplied and mpack built successfully, then try |
1260 |
|
|
# to send email using mpack. |
1261 |
|
|
if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then |
1262 |
|
|
echo "No results email was sent." |
1263 |
|
|
else |
1264 |
|
|
if test "x$HAVE_MPACK" = xt ; then |
1265 |
|
|
tar -cf $DRESULTS".tar" $DRESULTS > /dev/null 2>&1 \ |
1266 |
|
|
&& gzip $DRESULTS".tar" \ |
1267 |
edhill |
1.44 |
&& $MPACK -s MITgcm-test -m 3555000 $DRESULTS".tar.gz" $ADDRESSES |
1268 |
edhill |
1.20 |
RETVAL=$? |
1269 |
|
|
if test "x$RETVAL" != x0 ; then |
1270 |
|
|
echo |
1271 |
|
|
echo "Warning: The tar, gzip, & mpack step failed. Please send email" |
1272 |
|
|
echo " to <MITgcm-support@mitgcm.org> for help. You may copy the " |
1273 |
|
|
echo " summary of results from the directory \"$DRESULTS\"." |
1274 |
|
|
echo |
1275 |
|
|
else |
1276 |
|
|
echo |
1277 |
|
|
echo "An email containing results was sent to the following addresses:" |
1278 |
|
|
echo " \"$ADDRESSES\"" |
1279 |
|
|
echo |
1280 |
|
|
fi |
1281 |
|
|
test -f $DRESULTS".tar" && rm -f $DRESULTS".tar" |
1282 |
|
|
test -f $DRESULTS".tar.gz" && rm -f $DRESULTS".tar.gz" |
1283 |
|
|
fi |
1284 |
|
|
fi |
1285 |
edhill |
1.13 |
|
1286 |
jmc |
1.91 |
rm -f tr_cmpnum.c tr_cmpnum |
1287 |
edhill |
1.1 |
|
1288 |
edhill |
1.12 |
if test "x$CLEANUP" != xt ; then |
1289 |
jmc |
1.102 |
cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //' |
1290 |
edhill |
1.25 |
if test -e tr_out.txt ; then |
1291 |
|
|
mv tr_out.txt tr_out.txt.old |
1292 |
edhill |
1.14 |
fi |
1293 |
jmc |
1.103 |
cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt |
1294 |
edhill |
1.12 |
fi |
1295 |
edhill |
1.1 |
|
1296 |
edhill |
1.40 |
if test "x$DELDIR" = xt ; then |
1297 |
|
|
rm -rf $DRESULTS |
1298 |
|
|
fi |
1299 |
|
|
|