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updated December 15, 2005 for iter177 ecco1x1 computation |
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menemenlis@jpl.nasa.gov |
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|
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This verification experiment is identical global_with_exf |
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except that it includes CFC-11 diagnostic as per OCMIP-2 |
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protocol (http://www.ipsl.jussieu.fr/OCMIP/). |
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CFC-11 output in mol/m^3 is output in files TR1.*.data |
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Example of how to read this output file using matlab is |
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in input/lookat.m |
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|
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============================================================== |
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|
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Configuring and running the ecco1x1 configuration with iter177 |
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surface boundary conditions and CFC11. |
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Surface forcing files are assumed available in MITgcm/../iter177 |
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|
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1) get code: |
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|
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cvs co -r release1_50yr MITgcm_code |
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cvs co -r release1_50yr MITgcm/verification/global_with_CFC11 |
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cd MITgcm |
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cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project |
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|
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2) compile code: |
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|
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mkdir bin exe |
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cd bin |
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\cp ../verification/global_with_CFC11/code1x1/* . |
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\cp ../verification/global_with_CFC11/code1x1/.g* . |
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\mv KPP_OPTIONS.h_iter177 KPP_OPTIONS.h |
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\mv SIZE.h.36 SIZE.h |
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../tools/genmake -mpi -platform=columbia -makefile |
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make depend |
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make -j |
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|
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3) execute code |
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|
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cd ../exe |
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\cp ../verification/global_with_CFC11/input1x1/* . |
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ln -sf ../../iter177/* . |
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\mv data.gmredi_iter177 data.gmredi |
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\mv data_iter177 data |
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\mv data.exf_iter177 data.exf |
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\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
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\cp ../verification/global_with_CFC11/input/FICE . |
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\cp ../verification/global_with_CFC11/input/PATM . |
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\cp ../verification/global_with_CFC11/input/XKW . |
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qsub job.36 |
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|
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============================================================== |
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|
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Configuring 8 4x4-deg 4-cpu x 15-level experiment on chapman: |
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|
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Experiment 0: Baseline integration |
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Experiment 1: viscAr 1e-3 -> .5E-3 |
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Experiment 2: viscAh 5e5 -> 4e5 |
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Experiment 3: diffKrT 3e-5 -> 2e-5 |
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Experiment 4: diffKrS 3e-5 -> 2e-5 |
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Experiment 5: tauThetaClimRelax 5184000 -> 4665600 |
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Experiment 6: tauSaltClimRelax 15552000 -> 7776000 |
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Experiment 7: GM_background_K 1000 -> 900 |
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|
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(note that viscAr=0.9e3 crashes during first time step) |
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|
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--- |
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|
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cd bin |
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cp ../verification/global_ocean.90x40x15/code/GMREDI_OPTIONS.h . |
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cp ../verification/global_with_CFC11/code4x4/*.h . |
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cp ../verification/global_with_CFC11/code4x4/*.F . |
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../tools/genmake -mpi -platform=ames_opt -makefile |
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make depend |
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make -j |
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|
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--- |
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|
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cd ../exe |
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\cp ../verification/global_ocean.90x40x15/input/* . |
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\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
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\cp ../verification/global_with_CFC11/input4x4/FICE4x4 FICE |
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\cp ../verification/global_with_CFC11/input4x4/PATM4x4 PATM |
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\cp ../verification/global_with_CFC11/input4x4/XKW4x4 XKW |
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cd .. |
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cp -r exe exe0 |
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cp -r exe exe1 |
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cp -r exe exe2 |
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cp -r exe exe3 |
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cp -r exe exe4 |
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cp -r exe exe5 |
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cp -r exe exe6 |
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cp -r exe exe7 |
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\cp verification/global_with_CFC11/input4x4/data.0 exe0/data |
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\cp verification/global_with_CFC11/input4x4/data.1 exe1/data |
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\cp verification/global_with_CFC11/input4x4/data.2 exe2/data |
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\cp verification/global_with_CFC11/input4x4/data.3 exe3/data |
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\cp verification/global_with_CFC11/input4x4/data.4 exe4/data |
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\cp verification/global_with_CFC11/input4x4/data.5 exe5/data |
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\cp verification/global_with_CFC11/input4x4/data.6 exe6/data |
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\cp verification/global_with_CFC11/input4x4/data.0 exe7/data |
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\cp verification/global_with_CFC11/input4x4/data.gmredi exe7 |
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qsub verification/global_with_CFC11/input4x4/jobfile |
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|
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# requires about 1:40 to complete on chapman, 32-CPU queue |
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|
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cd exe0 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe1 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe2 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe3 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe4 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe5 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe6 |
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RM *.meta |
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RM GM* pickup* STD* |
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cd ../exe7 |
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RM *.meta |
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RM GM* pickup* STD* |
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|
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============================================================== |
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|
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Configuring and running the 50-year JPL telescoping integration: |
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|
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1) get code: |
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|
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setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
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cvs login ( CVS password: cvsanon ) |
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cvs co -r release1_50yr MITgcm |
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|
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2) compile code: |
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|
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cd MITgcm/bin |
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cp ../verification/global_with_CFC11/code50yr/*.h . |
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cp ../verification/global_with_CFC11/code50yr/*.F . |
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cp ../verification/global_with_CFC11/code50yr/.genmakerc . |
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../tools/genmake -mpi -platform=o2k -makefile |
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make depend |
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make |
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|
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3) run code for first spin-up year (1931) |
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|
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cd ../exe |
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|
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get forcing files: |
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bathy_50yr.bin NCEP_1948_sw NCEP_1948_vstr lev_clim_temp.bin |
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NCEP_1948_emp NCEP_1948_trb run-off.bin_1x1 lev_clim_salt.bin |
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NCEP_1948_sst NCEP_1948_ustr salt_14months.bin |
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|
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\cp ../verification/global_with_CFC11/input50yr/* . |
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\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
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\cp ../verification/global_with_CFC11/input/FICE . |
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\cp ../verification/global_with_CFC11/input/PATM . |
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\cp ../verification/global_with_CFC11/input/XKW . |
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|
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mpirun -np 64 mitgcmuv |
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|
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============================================================== |
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|
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Configuring and running the ecco1x1 configuration with CFC11. |
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Surface forcing files are assumed available in MITgcm/../iter69 |
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|
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1) get code: |
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|
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cvs co -r release1_50yr MITgcm_code |
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cvs co -r release1_50yr MITgcm/verification/global_with_CFC11 |
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cd MITgcm |
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cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project |
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|
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2) compile code: |
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|
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mkdir bin exe |
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cd bin |
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\cp ../verification/global_with_CFC11/code1x1/* . |
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\cp ../verification/global_with_CFC11/code1x1/.g* . |
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../tools/genmake -mpi -platform=columbia -makefile |
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make depend |
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make -j |
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|
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3) execute code |
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|
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cd ../exe |
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\cp ../verification/global_with_CFC11/input1x1/* . |
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ln -sf ../../iter69/* . |
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\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
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\cp ../verification/global_with_CFC11/input/FICE . |
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\cp ../verification/global_with_CFC11/input/PATM . |
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\cp ../verification/global_with_CFC11/input/XKW . |
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qsub job.144 |
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|
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|
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============================================================== |
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|
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Configuring and running the 50-year JPL telescoping integration with sea-ice: |
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|
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1) get code: |
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|
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setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
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cvs login ( CVS password: cvsanon ) |
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cvs co -r release1_50yr MITgcm |
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|
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2) compile code: |
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|
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cd MITgcm/bin |
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cp ../verification/global_with_CFC11/code50yr/*.h . |
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cp ../verification/global_with_CFC11/code50yr/*.F . |
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cp ../verification/global_with_CFC11/code50yr/CPP_OPTIONS.h.SEAICE CPP_OPTIONS.h |
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cp ../verification/global_with_CFC11/code50yr/ECCO_CPPOPTIONS.h.SEAICE ECCO_CPPOPTIONS.h |
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cp ../verification/global_with_CFC11/code50yr/.genmakerc.SEAICE .genmakerc |
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../tools/genmake -mpi -platform=o2k -makefile |
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make depend |
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make |
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|
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3) run code for first spin-up year (1931) |
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|
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cd ../exe |
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|
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get forcing files: |
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bathy_50yr.bin NCEP_1948_sw NCEP_1948_vstr lev_clim_temp.bin |
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NCEP_1948_emp NCEP_1948_trb run-off.bin_1x1 lev_clim_salt.bin |
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NCEP_1948_sst NCEP_1948_ustr salt_14months.bin |
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NCEP_1948_u10m NCEP_1948_v10m NCEP_1948_tmp2m NCEP_1948_spfh2m |
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NCEP_1948_lw NCEP_1948_lhf NCEP_1948_rain |
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|
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\cp ../verification/global_with_CFC11/input50yr/* . |
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\cp data.pkg.SEAICE data.pkg |
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\cp data.exf.SEAICE data.exf |
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\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
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\cp ../verification/global_with_CFC11/input/FICE . |
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\cp ../verification/global_with_CFC11/input/PATM . |
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\cp ../verification/global_with_CFC11/input/XKW . |
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|
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mpirun -np 64 mitgcmuv |
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