| 1 |
dimitri |
1.1.2.2.2.11 |
updated December 15, 2005 for iter177 ecco1x1 computation |
| 2 |
|
|
menemenlis@jpl.nasa.gov |
| 3 |
dimitri |
1.1.2.2 |
|
| 4 |
|
|
This verification experiment is identical global_with_exf |
| 5 |
|
|
except that it includes CFC-11 diagnostic as per OCMIP-2 |
| 6 |
|
|
protocol (http://www.ipsl.jussieu.fr/OCMIP/). |
| 7 |
|
|
CFC-11 output in mol/m^3 is output in files TR1.*.data |
| 8 |
|
|
Example of how to read this output file using matlab is |
| 9 |
|
|
in input/lookat.m |
| 10 |
dimitri |
1.1.2.2.2.1 |
|
| 11 |
dimitri |
1.1.2.2.2.3 |
============================================================== |
| 12 |
|
|
|
| 13 |
dimitri |
1.1.2.2.2.11 |
Configuring and running the ecco1x1 configuration with iter177 |
| 14 |
|
|
surface boundary conditions and CFC11. |
| 15 |
|
|
Surface forcing files are assumed available in MITgcm/../iter177 |
| 16 |
|
|
|
| 17 |
|
|
1) get code: |
| 18 |
|
|
|
| 19 |
|
|
cvs co -r release1_50yr MITgcm_code |
| 20 |
|
|
cvs co -r release1_50yr MITgcm/verification/global_with_CFC11 |
| 21 |
|
|
cd MITgcm |
| 22 |
|
|
cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project |
| 23 |
|
|
|
| 24 |
|
|
2) compile code: |
| 25 |
|
|
|
| 26 |
|
|
mkdir bin exe |
| 27 |
|
|
cd bin |
| 28 |
|
|
\cp ../verification/global_with_CFC11/code1x1/* . |
| 29 |
|
|
\cp ../verification/global_with_CFC11/code1x1/.g* . |
| 30 |
|
|
\mv KPP_OPTIONS.h_iter177 KPP_OPTIONS.h |
| 31 |
|
|
\mv SIZE.h.36 SIZE.h |
| 32 |
|
|
../tools/genmake -mpi -platform=columbia -makefile |
| 33 |
|
|
make depend |
| 34 |
|
|
make -j |
| 35 |
|
|
|
| 36 |
|
|
3) execute code |
| 37 |
|
|
|
| 38 |
|
|
cd ../exe |
| 39 |
|
|
\cp ../verification/global_with_CFC11/input1x1/* . |
| 40 |
|
|
ln -sf ../../iter177/* . |
| 41 |
|
|
\mv data.gmredi_iter177 data.gmredi |
| 42 |
|
|
\mv data_iter177 data |
| 43 |
|
|
\mv data.exf_iter177 data.exf |
| 44 |
|
|
\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
| 45 |
|
|
\cp ../verification/global_with_CFC11/input/FICE . |
| 46 |
|
|
\cp ../verification/global_with_CFC11/input/PATM . |
| 47 |
|
|
\cp ../verification/global_with_CFC11/input/XKW . |
| 48 |
|
|
qsub job.36 |
| 49 |
|
|
|
| 50 |
|
|
============================================================== |
| 51 |
|
|
|
| 52 |
dimitri |
1.1.2.2.2.4 |
Configuring 8 4x4-deg 4-cpu x 15-level experiment on chapman: |
| 53 |
dimitri |
1.1.2.2.2.3 |
|
| 54 |
|
|
Experiment 0: Baseline integration |
| 55 |
dimitri |
1.1.2.2.2.5 |
Experiment 1: viscAr 1e-3 -> .5E-3 |
| 56 |
dimitri |
1.1.2.2.2.3 |
Experiment 2: viscAh 5e5 -> 4e5 |
| 57 |
|
|
Experiment 3: diffKrT 3e-5 -> 2e-5 |
| 58 |
|
|
Experiment 4: diffKrS 3e-5 -> 2e-5 |
| 59 |
|
|
Experiment 5: tauThetaClimRelax 5184000 -> 4665600 |
| 60 |
|
|
Experiment 6: tauSaltClimRelax 15552000 -> 7776000 |
| 61 |
|
|
Experiment 7: GM_background_K 1000 -> 900 |
| 62 |
|
|
|
| 63 |
dimitri |
1.1.2.2.2.5 |
(note that viscAr=0.9e3 crashes during first time step) |
| 64 |
|
|
|
| 65 |
dimitri |
1.1.2.2.2.3 |
--- |
| 66 |
|
|
|
| 67 |
|
|
cd bin |
| 68 |
|
|
cp ../verification/global_ocean.90x40x15/code/GMREDI_OPTIONS.h . |
| 69 |
|
|
cp ../verification/global_with_CFC11/code4x4/*.h . |
| 70 |
|
|
cp ../verification/global_with_CFC11/code4x4/*.F . |
| 71 |
dimitri |
1.1.2.2.2.4 |
../tools/genmake -mpi -platform=ames_opt -makefile |
| 72 |
dimitri |
1.1.2.2.2.3 |
make depend |
| 73 |
dimitri |
1.1.2.2.2.9 |
make -j |
| 74 |
dimitri |
1.1.2.2.2.3 |
|
| 75 |
|
|
--- |
| 76 |
|
|
|
| 77 |
|
|
cd ../exe |
| 78 |
dimitri |
1.1.2.2.2.4 |
\cp ../verification/global_ocean.90x40x15/input/* . |
| 79 |
|
|
\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
| 80 |
|
|
\cp ../verification/global_with_CFC11/input4x4/FICE4x4 FICE |
| 81 |
|
|
\cp ../verification/global_with_CFC11/input4x4/PATM4x4 PATM |
| 82 |
|
|
\cp ../verification/global_with_CFC11/input4x4/XKW4x4 XKW |
| 83 |
dimitri |
1.1.2.2.2.3 |
cd .. |
| 84 |
|
|
cp -r exe exe0 |
| 85 |
|
|
cp -r exe exe1 |
| 86 |
|
|
cp -r exe exe2 |
| 87 |
|
|
cp -r exe exe3 |
| 88 |
|
|
cp -r exe exe4 |
| 89 |
|
|
cp -r exe exe5 |
| 90 |
|
|
cp -r exe exe6 |
| 91 |
|
|
cp -r exe exe7 |
| 92 |
dimitri |
1.1.2.2.2.4 |
\cp verification/global_with_CFC11/input4x4/data.0 exe0/data |
| 93 |
|
|
\cp verification/global_with_CFC11/input4x4/data.1 exe1/data |
| 94 |
|
|
\cp verification/global_with_CFC11/input4x4/data.2 exe2/data |
| 95 |
|
|
\cp verification/global_with_CFC11/input4x4/data.3 exe3/data |
| 96 |
|
|
\cp verification/global_with_CFC11/input4x4/data.4 exe4/data |
| 97 |
|
|
\cp verification/global_with_CFC11/input4x4/data.5 exe5/data |
| 98 |
|
|
\cp verification/global_with_CFC11/input4x4/data.6 exe6/data |
| 99 |
|
|
\cp verification/global_with_CFC11/input4x4/data.0 exe7/data |
| 100 |
|
|
\cp verification/global_with_CFC11/input4x4/data.gmredi exe7 |
| 101 |
dimitri |
1.1.2.2.2.3 |
qsub verification/global_with_CFC11/input4x4/jobfile |
| 102 |
dimitri |
1.1.2.2.2.5 |
|
| 103 |
dimitri |
1.1.2.2.2.6 |
# requires about 1:40 to complete on chapman, 32-CPU queue |
| 104 |
dimitri |
1.1.2.2.2.5 |
|
| 105 |
dimitri |
1.1.2.2.2.6 |
cd exe0 |
| 106 |
|
|
RM *.meta |
| 107 |
|
|
RM GM* pickup* STD* |
| 108 |
|
|
cd ../exe1 |
| 109 |
|
|
RM *.meta |
| 110 |
|
|
RM GM* pickup* STD* |
| 111 |
|
|
cd ../exe2 |
| 112 |
|
|
RM *.meta |
| 113 |
|
|
RM GM* pickup* STD* |
| 114 |
|
|
cd ../exe3 |
| 115 |
|
|
RM *.meta |
| 116 |
|
|
RM GM* pickup* STD* |
| 117 |
|
|
cd ../exe4 |
| 118 |
|
|
RM *.meta |
| 119 |
|
|
RM GM* pickup* STD* |
| 120 |
|
|
cd ../exe5 |
| 121 |
|
|
RM *.meta |
| 122 |
|
|
RM GM* pickup* STD* |
| 123 |
|
|
cd ../exe6 |
| 124 |
|
|
RM *.meta |
| 125 |
|
|
RM GM* pickup* STD* |
| 126 |
|
|
cd ../exe7 |
| 127 |
|
|
RM *.meta |
| 128 |
|
|
RM GM* pickup* STD* |
| 129 |
dimitri |
1.1.2.2.2.3 |
|
| 130 |
|
|
============================================================== |
| 131 |
|
|
|
| 132 |
dimitri |
1.1.2.2.2.1 |
Configuring and running the 50-year JPL telescoping integration: |
| 133 |
|
|
|
| 134 |
|
|
1) get code: |
| 135 |
|
|
|
| 136 |
|
|
setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
| 137 |
|
|
cvs login ( CVS password: cvsanon ) |
| 138 |
dimitri |
1.1.2.2.2.2 |
cvs co -r release1_50yr MITgcm |
| 139 |
dimitri |
1.1.2.2.2.1 |
|
| 140 |
|
|
2) compile code: |
| 141 |
|
|
|
| 142 |
|
|
cd MITgcm/bin |
| 143 |
|
|
cp ../verification/global_with_CFC11/code50yr/*.h . |
| 144 |
|
|
cp ../verification/global_with_CFC11/code50yr/*.F . |
| 145 |
|
|
cp ../verification/global_with_CFC11/code50yr/.genmakerc . |
| 146 |
|
|
../tools/genmake -mpi -platform=o2k -makefile |
| 147 |
|
|
make depend |
| 148 |
|
|
make |
| 149 |
|
|
|
| 150 |
|
|
3) run code for first spin-up year (1931) |
| 151 |
|
|
|
| 152 |
|
|
cd ../exe |
| 153 |
|
|
|
| 154 |
|
|
get forcing files: |
| 155 |
dimitri |
1.1.2.2.2.7 |
bathy_50yr.bin NCEP_1948_sw NCEP_1948_vstr lev_clim_temp.bin |
| 156 |
dimitri |
1.1.2.2.2.1 |
NCEP_1948_emp NCEP_1948_trb run-off.bin_1x1 lev_clim_salt.bin |
| 157 |
|
|
NCEP_1948_sst NCEP_1948_ustr salt_14months.bin |
| 158 |
|
|
|
| 159 |
dimitri |
1.1.2.2.2.7 |
\cp ../verification/global_with_CFC11/input50yr/* . |
| 160 |
|
|
\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
| 161 |
|
|
\cp ../verification/global_with_CFC11/input/FICE . |
| 162 |
|
|
\cp ../verification/global_with_CFC11/input/PATM . |
| 163 |
|
|
\cp ../verification/global_with_CFC11/input/XKW . |
| 164 |
dimitri |
1.1.2.2.2.1 |
|
| 165 |
dimitri |
1.1.2.2.2.7 |
mpirun -np 64 mitgcmuv |
| 166 |
dimitri |
1.1.2.2.2.8 |
|
| 167 |
|
|
============================================================== |
| 168 |
|
|
|
| 169 |
dimitri |
1.1.2.2.2.9 |
Configuring and running the ecco1x1 configuration with CFC11. |
| 170 |
|
|
Surface forcing files are assumed available in MITgcm/../iter69 |
| 171 |
|
|
|
| 172 |
|
|
1) get code: |
| 173 |
|
|
|
| 174 |
|
|
cvs co -r release1_50yr MITgcm_code |
| 175 |
|
|
cvs co -r release1_50yr MITgcm/verification/global_with_CFC11 |
| 176 |
|
|
cd MITgcm |
| 177 |
|
|
cvs co -d ocean_inversion_project MITgcm_contrib/ocean_inversion_project |
| 178 |
|
|
|
| 179 |
|
|
2) compile code: |
| 180 |
|
|
|
| 181 |
|
|
mkdir bin exe |
| 182 |
|
|
cd bin |
| 183 |
|
|
\cp ../verification/global_with_CFC11/code1x1/* . |
| 184 |
|
|
\cp ../verification/global_with_CFC11/code1x1/.g* . |
| 185 |
|
|
../tools/genmake -mpi -platform=columbia -makefile |
| 186 |
|
|
make depend |
| 187 |
|
|
make -j |
| 188 |
|
|
|
| 189 |
|
|
3) execute code |
| 190 |
|
|
|
| 191 |
|
|
cd ../exe |
| 192 |
|
|
\cp ../verification/global_with_CFC11/input1x1/* . |
| 193 |
|
|
ln -sf ../../iter69/* . |
| 194 |
|
|
\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
| 195 |
|
|
\cp ../verification/global_with_CFC11/input/FICE . |
| 196 |
|
|
\cp ../verification/global_with_CFC11/input/PATM . |
| 197 |
|
|
\cp ../verification/global_with_CFC11/input/XKW . |
| 198 |
dimitri |
1.1.2.2.2.10 |
qsub job.144 |
| 199 |
dimitri |
1.1.2.2.2.9 |
|
| 200 |
|
|
|
| 201 |
|
|
============================================================== |
| 202 |
|
|
|
| 203 |
dimitri |
1.1.2.2.2.8 |
Configuring and running the 50-year JPL telescoping integration with sea-ice: |
| 204 |
|
|
|
| 205 |
|
|
1) get code: |
| 206 |
|
|
|
| 207 |
|
|
setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack |
| 208 |
|
|
cvs login ( CVS password: cvsanon ) |
| 209 |
|
|
cvs co -r release1_50yr MITgcm |
| 210 |
|
|
|
| 211 |
|
|
2) compile code: |
| 212 |
|
|
|
| 213 |
|
|
cd MITgcm/bin |
| 214 |
|
|
cp ../verification/global_with_CFC11/code50yr/*.h . |
| 215 |
|
|
cp ../verification/global_with_CFC11/code50yr/*.F . |
| 216 |
|
|
cp ../verification/global_with_CFC11/code50yr/CPP_OPTIONS.h.SEAICE CPP_OPTIONS.h |
| 217 |
|
|
cp ../verification/global_with_CFC11/code50yr/ECCO_CPPOPTIONS.h.SEAICE ECCO_CPPOPTIONS.h |
| 218 |
|
|
cp ../verification/global_with_CFC11/code50yr/.genmakerc.SEAICE .genmakerc |
| 219 |
|
|
../tools/genmake -mpi -platform=o2k -makefile |
| 220 |
|
|
make depend |
| 221 |
|
|
make |
| 222 |
|
|
|
| 223 |
|
|
3) run code for first spin-up year (1931) |
| 224 |
|
|
|
| 225 |
|
|
cd ../exe |
| 226 |
|
|
|
| 227 |
|
|
get forcing files: |
| 228 |
|
|
bathy_50yr.bin NCEP_1948_sw NCEP_1948_vstr lev_clim_temp.bin |
| 229 |
|
|
NCEP_1948_emp NCEP_1948_trb run-off.bin_1x1 lev_clim_salt.bin |
| 230 |
|
|
NCEP_1948_sst NCEP_1948_ustr salt_14months.bin |
| 231 |
|
|
NCEP_1948_u10m NCEP_1948_v10m NCEP_1948_tmp2m NCEP_1948_spfh2m |
| 232 |
|
|
NCEP_1948_lw NCEP_1948_lhf NCEP_1948_rain |
| 233 |
|
|
|
| 234 |
|
|
\cp ../verification/global_with_CFC11/input50yr/* . |
| 235 |
|
|
\cp data.pkg.SEAICE data.pkg |
| 236 |
|
|
\cp data.exf.SEAICE data.exf |
| 237 |
|
|
\cp ../verification/global_with_CFC11/input/cfc1112.atm . |
| 238 |
|
|
\cp ../verification/global_with_CFC11/input/FICE . |
| 239 |
|
|
\cp ../verification/global_with_CFC11/input/PATM . |
| 240 |
|
|
\cp ../verification/global_with_CFC11/input/XKW . |
| 241 |
|
|
|
| 242 |
|
|
mpirun -np 64 mitgcmuv |
Parent Directory
| 
Revision Log
| 
Revision Graph