/[MITgcm]/MITgcm/verification/cpl_aim+ocn/run_cpl_test

Diff of /MITgcm/verification/cpl_aim+ocn/run_cpl_test

Parent Directory | Revision Log | View Revision Graph Revision Graph | View Patch Patch

-revision 1.9 by jmc,
Mon Jul 17 01:34:23 2006 UTC
+revision 1.10 by jmc,
Wed Nov  7 01:45:02 2007 UTC
 Line 4
  # $Name$
  Np=3
- Opt=' '
- Opt='-ieee'
  if [ $# -lt 1 ]
  then
    echo 'Usage:'`basename $0`' step '
-   echo ' => test coupled set-up on myrinet cluster'
+   echo ' => test coupled set-up on linux box (1.cpu)'
    echo 'step = 0 : clean all directories'
    echo 'step = 1 : compile the 3 executables (cpl,ocn,atm)'
    echo 'step = 2 : copy input files and dir(s)'
-   echo "step = 3 : run on $Np processor"
+   echo "step = 3 : run with $Np mpi processes"
    echo 'step = 4 : check the results'
    echo 'step = 5 : remove output files in rank_0,1,2 dir.'
    exit
-Line 21 
 fi
+Line 19 
 fi
  kpr=$1
  dir=`pwd`
- #- only works from a 3 nodes PBS bach session ( qsub -I -l nodes=3:p4 )
- #  on myrinet cluster:
- xx=`hostname | sed 's/[0-9]/X/g'`
- if test $xx != 'myrinet-X-XX'
- then
-   echo ' hostname='`hostname`
-   echo 'for now, works only on myrinet cluster'
-   exit 9
- fi
- if test 'dummy'$PBS_NODEFILE = 'dummy'
- then
-   echo ' $PBS_NODEFILE not defined'
-   echo "for now, works only from a $Np nodes PBS bach session"
-   exit 8
- else ncpus=`wc -l $PBS_NODEFILE | awk '{print $1}'`
-  if test $ncpus != $Np ; then
-   echo ' Nb of nodes from $PBS_NODEFILE =' $ncpus
-   echo "for now, works only from a $Np nodes PBS bach session"
-   exit 8
-  fi
- fi
  #============================================================================
  if test $kpr = 0
  then
-  rm -f genmake_optfile pr_group std_outp
+  rm -f genmake_optfile pr_group std_outp comp_res.{ocn,atm,land,sice}
   rm -f build_???/TTT.*make.* build_???/TTT.mkdepend.*
   /bin/rm -r -f rank_0 rank_1 rank_2
   if test -f build_cpl/Makefile ; then cd build_cpl ; make CLEAN ; cd .. ; fi
-Line 57 
 fi
+Line 33 
 fi
  if test $kpr = 5
  then
   echo 'remove output files in rank_0,1,2 dir.'
-  rm -f pr_group std_outp
+  rm -f genmake_optfile pr_group std_outp comp_res.{ocn,atm,land,sice}
   if test -d rank_0 ; then cd rank_0 ; rm -f Coupler.0000.clog ; cd .. ; fi
   if test -d rank_1
   then cd rank_1 ; rm -f *.data *.meta STD???.0000 UV-*.0001.clog ; cd .. ; fi
-Line 68 
 fi
+Line 44 
 fi
  if test $kpr = 1
  then
-  cp -p ../../tools/build_options/linux_ia32_ifc+mpi_cg01 genmake_optfile
+ #- choice of the optfile: take a local one in dir verification with sufix '.mpi'
+  nbOpF=`ls ../linux_*.mpi 2> /dev/null | wc -l`
+  if test $nbOpF = 1
+  then
+    yy=`ls ../linux_*.mpi` ; cp -p $yy genmake_optfile
+    zz=`grep '^FC=' genmake_optfile`
+    echo " Using optfile: $yy  (compiler=$zz)"
+  else echo 'Pb in finding optfile' ; exit;
+  fi
+ #---
   echo '==== compile coupler:'
   cd build_cpl
   echo ' --- genmake2 (cpl):'
-  ../../../tools/genmake2 -of ../genmake_optfile $Opt >  TTT.genmake.$$
+  ../../../tools/genmake2 -of ../genmake_optfile -mpi -ieee >  TTT.genmake.$$
   tail -5 TTT.genmake.$$
   echo ' --- make depend (cpl):'
   make depend > TTT.mkdepend.$$
-Line 85 
 then
+Line 70 
 then
   echo '==== compile OGCM:'
   cd build_ocn
   echo ' --- genmake2 (ocn):'
-  ../../../tools/genmake2 -of ../genmake_optfile $Opt >  TTT.genmake.$$
+  ../../../tools/genmake2 -of ../genmake_optfile -mpi -ieee >  TTT.genmake.$$
   tail -5 TTT.genmake.$$
   echo ' --- make depend (ocn):'
   make depend > TTT.mkdepend.$$
-Line 98 
 then
+Line 83 
 then
   echo '==== compile AGCM:'
   cd build_atm
   echo ' --- genmake2 (atm):'
-  ../../../tools/genmake2 -of ../genmake_optfile $Opt >  TTT.genmake.$$
+  ../../../tools/genmake2 -of ../genmake_optfile -mpi -ieee >  TTT.genmake.$$
   tail -5 TTT.genmake.$$
   echo ' --- make depend (atm):'
   make depend > TTT.mkdepend.$$
-Line 139 
 then
+Line 124 
 then
   echo $ROOTDIR
   tmpfil=TTT.$$
-  echo $PBS_NODEFILE
-  list=`cat $PBS_NODEFILE`
   rm -f pr_group ; touch pr_group
-  nc=0 ; dd1=cpl ;
+  nc=0; xx=`hostname`
-  for xx in $list
+  for dd1 in cpl ocn atm
   do
    echo $xx $nc $dir/build_$dd1/mitgcmuv >> pr_group
-   if test $nc = 0 ; then dd1=ocn ; else dd1=atm ; fi
    nc=1
   done
   cd $ROOTDIR
-  #  -wd $ROOTDIR
+ # /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group -wd $ROOTDIR --gm-kill 5 -v  ./build_cpl/mitgcmuv > std_outp 2>&1
-  /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group --gm-kill 5 -v  ./build_cpl/mitgcmuv > std_outp 2>&1
+  mpirun -p4pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1
   tail -20 std_outp
   ls -l rank_?/pickup*.ckptA.001.001.data
-Line 164 
 then
+Line 146 
 then
   if test -f rank_1/STDOUT.0000
   then echo '==> check Ocean output:'
      /home/jmc/bin/comp_res rank_1/STDOUT.0000 results/ocnSTDOUT.0000
-    echo ' '
+     mv -f comp_res.log comp_res.ocn
+     echo ' '
   else echo 'No Ocean output file in rank_1' ; fi
   if test -f rank_2/STDOUT.0000
   then
      echo '==> check Atmos output:'
      /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000
+     mv -f comp_res.log comp_res.atm
      echo '==> check Land output:'
      /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 L
+     mv -f comp_res.log comp_res.land
      echo '==> check thSIce output:'
      /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 I
-    echo ' '
+     mv -f comp_res.log comp_res.sice
+     echo ' '
   else echo 'No Atmos output file in rank_1' ; fi
  fi

 Legend:



Removed from v.1.9
 


changed lines


 
Added in v.1.10
 Legend:



Removed from v.1.9
 


changed lines


 
Added in v.1.10
-Removed from v.1.9
+Added in v.1.10

	ViewVC Help
Powered by ViewVC 1.1.22