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#! /bin/sh |
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|
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# $Header: /u/gcmpack/MITgcm/verification/cpl_aim+ocn/run_cpl_test,v 1.15 2010/01/13 00:25:37 jmc Exp $ |
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# $Name: $ |
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|
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#- default: |
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Np=3 |
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MTH= |
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MTHo= |
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MTHa= |
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GMKopt='-ieee' |
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|
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#- parse options: |
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if [ $# -ge 1 ] ; then if test $1 = '-mth' ; then |
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MTH='-omp' ; shift |
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if test -f input_ocn/eedata.mth ; then MTHo=$MTH ; fi |
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if test -f input_atm/eedata.mth ; then MTHa=$MTH ; fi |
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fi ; fi |
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if [ $# -ne 1 ] |
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then |
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echo 'Usage:'`basename $0`' [opt] step' |
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echo ' => test coupled set-up on linux box (1.cpu)' |
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echo 'opt = -mth : compile and run (if eedata.mth) 2-threads for ocn & atm' |
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echo ' step = 0 : clean all directories' |
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echo ' step = 1 : compile the 3 executables (cpl,ocn,atm)' |
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echo ' step = 2 : copy input files and dir(s)' |
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echo " step = 3 : run with $Np mpi processes" |
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echo ' step = 4 : check the results' |
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echo ' step = 5 : remove output files in rank_0,1,2 dir.' |
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exit |
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fi |
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kpr=$1 |
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dir=`pwd` |
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|
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#============================================================================ |
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|
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if test $kpr = 0 |
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then |
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rm -f pr_group std_outp comp_res.{ocn,atm,land,sice} |
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rm -f build_???/TTT.*make.* build_???/TTT.mkdepend.* |
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/bin/rm -r -f rank_0 rank_1 rank_2 |
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if test -f build_cpl/Makefile ; then cd build_cpl ; make CLEAN ; cd .. ; fi |
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if test -f build_ocn/Makefile ; then cd build_ocn ; make CLEAN ; cd .. ; fi |
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if test -f build_atm/Makefile ; then cd build_atm ; make CLEAN ; cd .. ; fi |
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fi |
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if test $kpr = 5 |
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then |
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echo 'remove output files in rank_0,1,2 dir.' |
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rm -f pr_group std_outp comp_res.{ocn,atm,land,sice} |
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if test -d rank_0 ; then cd rank_0 ; rm -f Coupler.0000.clog ; cd .. ; fi |
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if test -d rank_1 |
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then cd rank_1 ; rm -f *.data *.meta STD???.0000 UV-*.0001.clog ; cd .. ; fi |
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if test -d rank_2 |
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then cd rank_2 ; rm -f *.data *.meta STD???.0000 UV-*.0001.clog ; cd .. ; fi |
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fi |
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|
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if test $kpr = 1 |
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then |
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|
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#- choice of the optfile: take a local one in dir verification with sufix '+mpi' |
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nbOpF=`ls ../linux_* | grep '+mpi' 2> /dev/null | wc -l` |
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if test $nbOpF = 1 |
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then |
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OPTFILE=`ls ../linux_* | grep '+mpi'` |
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zz=`grep '^FC=' $OPTFILE` |
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echo " Using optfile: $OPTFILE (compiler=$zz) $MTH" |
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else |
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echo "Pb in finding optfile: found $nbOpF :" |
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ls ../linux_* | grep '+mpi' ; exit |
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fi |
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zz=`echo $OPTFILE | grep -c '^\/'` |
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if test $zz = 0 ; then OPTFILE="../$OPTFILE" ; fi |
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#--- |
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echo '==== compile coupler:' |
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cd build_cpl |
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echo ' --- genmake2 (cpl):' |
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../../../tools/genmake2 -of $OPTFILE -mpi $GMKopt > TTT.genmake.$$ |
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tail -5 TTT.genmake.$$ |
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echo ' --- make depend (cpl):' |
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make depend > TTT.mkdepend.$$ |
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tail -5 TTT.mkdepend.$$ |
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echo ' --- make (cpl):' |
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make > TTT.make.$$ 2>&1 |
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tail -10 TTT.make.$$ |
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echo ' ' ; cd $dir |
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|
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echo '==== compile OGCM:' |
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cd build_ocn |
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echo ' --- genmake2 (ocn):' |
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../../../tools/genmake2 -of $OPTFILE -mpi $MTHo $GMKopt > TTT.genmake.$$ |
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tail -5 TTT.genmake.$$ |
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echo ' --- make depend (ocn):' |
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make depend > TTT.mkdepend.$$ |
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tail -10 TTT.mkdepend.$$ |
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echo ' --- make (ocn):' |
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make > TTT.make.$$ 2>&1 |
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tail -10 TTT.make.$$ |
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echo ' ' ; cd $dir |
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|
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echo '==== compile AGCM:' |
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cd build_atm |
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echo ' --- genmake2 (atm):' |
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../../../tools/genmake2 -of $OPTFILE -mpi $MTHa $GMKopt > TTT.genmake.$$ |
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tail -5 TTT.genmake.$$ |
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echo ' --- make depend (atm):' |
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make depend > TTT.mkdepend.$$ |
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tail -10 TTT.mkdepend.$$ |
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echo ' --- make (atm):' |
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make > TTT.make.$$ 2>&1 |
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tail -10 TTT.make.$$ |
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echo ' ' ; cd $dir |
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|
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ls -l build_???/mitgcmuv |
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|
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fi |
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|
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if test $kpr = 2 |
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then |
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/bin/rm -r -f rank_0 rank_1 rank_2 |
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echo 'CP dir:' input_cpl '->' rank_0 |
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cp -p -r input_cpl rank_0 |
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|
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echo 'CP dir:' input_ocn '->' rank_1 |
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cp -p -r input_ocn rank_1 |
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cd rank_1 |
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./prepare_run |
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if test "x$MTHo" != x ; then |
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echo " MTH run: mv -f eedata.mth eedata" |
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mv -f eedata.mth eedata |
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fi |
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cd $dir |
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|
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echo 'CP dir:' input_atm '->' rank_2 |
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cp -p -r input_atm rank_2 |
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cd rank_2 |
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./prepare_run |
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if test "x$MTHa" != x ; then |
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echo " MTH run: mv -f eedata.mth eedata" |
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mv -f eedata.mth eedata |
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fi |
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cd $dir |
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|
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fi |
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|
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if test $kpr = 3 |
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then |
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ROOTDIR=$dir |
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rm -f rank_?/pickup*.ckptA.00?.00?.??ta |
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echo $ROOTDIR |
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tmpfil=TTT.$$ |
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|
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rm -f pr_group ; touch pr_group |
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nc=0; xx=`hostname` |
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for dd1 in cpl ocn atm |
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do |
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echo $xx $nc $dir/build_$dd1/mitgcmuv >> pr_group |
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nc=1 |
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done |
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|
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cd $ROOTDIR |
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if test "x$MTH" != x ; then |
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export OMP_NUM_THREADS=2 ; export KMP_STACKSIZE=400m |
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if test "x$MTHo" != x ; then |
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echo -n " run OCN ($MTHo) with $OMP_NUM_THREADS threads ;" |
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fi |
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if test "x$MTHa" != x ; then |
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echo -n " run ATM ($MTHa) with $OMP_NUM_THREADS threads ;" |
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fi |
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echo "" |
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fi |
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# /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group -wd $ROOTDIR --gm-kill 5 -v ./build_cpl/mitgcmuv > std_outp 2>&1 |
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#- on danton (mpich-1): |
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mpirun -p4pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1 |
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#- on beagle: |
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#mpirun -pg pr_group -v ./build_cpl/mitgcmuv > std_outp 2>&1 |
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tail -20 std_outp |
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ls -l rank_?/pickup*.ckptA.001.001.data |
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|
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fi |
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|
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if test $kpr = 4 |
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then |
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|
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if test -f rank_1/STDOUT.0000 |
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then echo '==> check Ocean output:' |
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/home/jmc/bin/comp_res rank_1/STDOUT.0000 results/ocnSTDOUT.0000 |
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mv -f comp_res.log comp_res.ocn |
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echo ' ' |
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else echo 'No Ocean output file in rank_1' ; fi |
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|
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if test -f rank_2/STDOUT.0000 |
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then |
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echo '==> check Atmos output:' |
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/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 |
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mv -f comp_res.log comp_res.atm |
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echo '==> check Land output:' |
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/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 L |
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mv -f comp_res.log comp_res.land |
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echo '==> check thSIce output:' |
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/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 I |
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mv -f comp_res.log comp_res.sice |
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echo ' ' |
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else echo 'No Atmos output file in rank_2' ; fi |
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|
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fi |
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|
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exit 0 |
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