Annotation of /MITgcm/verification/cpl_aim+ocn/run_cpl_test

#! /bin/sh

# $Header: /u/gcmpack/MITgcm/verification/cpl_aim+ocn/run_cpl_test,v 1.6 2004/11/07 23:30:32 jmc Exp $
# $Name:  $

Np=3
Opt=' '
Opt='-ieee'
if [ $# -lt 1 ]
then
  echo 'Usage:'`basename $0`' step '
  echo ' => test coupled set-up on myrinet cluster'
  echo 'step = 0 : clean all directories'
  echo 'step = 1 : compile the 3 executables (cpl,ocn,atm)'
  echo 'step = 2 : copy input files and dir(s)'
  echo "step = 3 : run on $Np processor"
  echo 'step = 4 : check the results'
  exit
fi
kpr=$1
dir=`pwd`

#- only works from a 3 nodes PBS bach session ( qsub -I -l nodes=3:p4 )
#  on myrinet cluster:
xx=`hostname | sed 's/[0-9]/X/g'`
if test $xx != 'myrinet-X-XX'
then
  echo ' hostname='`hostname`
  echo 'for now, works only on myrinet cluster'
  exit 9
fi
if test 'dummy'$PBS_NODEFILE = 'dummy'
then
  echo ' $PBS_NODEFILE not defined'
  echo "for now, works only from a $Np nodes PBS bach session"
  exit 8
else ncpus=`wc -l $PBS_NODEFILE | awk '{print $1}'`
 if test $ncpus != $Np ; then
  echo ' Nb of nodes from $PBS_NODEFILE =' $ncpus
  echo "for now, works only from a $Np nodes PBS bach session"
  exit 8
 fi
fi

#============================================================================

if test $kpr = 0
then
 rm -f genmake_optfile pr_group std_outp
 rm -f build_???/TTT.*make.* build_???/TTT.mkdepend.*
 /bin/rm -r -f rank_0 rank_1 rank_2
 if test -f build_cpl/Makefile ; then cd build_cpl ; make CLEAN ; cd .. ; fi
 if test -f build_ocn/Makefile ; then cd build_ocn ; make CLEAN ; cd .. ; fi
 if test -f build_atm/Makefile ; then cd build_atm ; make CLEAN ; cd .. ; fi
fi

if test $kpr = 1
then

 cp -p ../../tools/build_options/linux_ia32_ifc+mpi_cg01 genmake_optfile
 echo '==== compile coupler:'
 cd build_cpl
 echo ' --- genmake2 (cpl):'
 ../../../tools/genmake2 -of ../genmake_optfile $Opt >  TTT.genmake.$$
 tail -5 TTT.genmake.$$
 echo ' --- make depend (cpl):'
 make depend > TTT.mkdepend.$$
 tail -5 TTT.mkdepend.$$
 echo ' --- make (cpl):'
 make > TTT.make.$$ 2>&1
 tail -10 TTT.make.$$
 echo ' ' ; cd $dir

 echo '==== compile OGCM:'
 cd build_ocn
 echo ' --- genmake2 (ocn):'
 ../../../tools/genmake2 -of ../genmake_optfile $Opt >  TTT.genmake.$$
 tail -5 TTT.genmake.$$
 echo ' --- make depend (ocn):'
 make depend > TTT.mkdepend.$$
 tail -10 TTT.mkdepend.$$
 echo ' --- make (ocn):'
 make > TTT.make.$$ 2>&1
 tail -10 TTT.make.$$
 echo ' ' ; cd $dir

 echo '==== compile AGCM:'
 cd build_atm
 echo ' --- genmake2 (atm):'
 ../../../tools/genmake2 -of ../genmake_optfile $Opt >  TTT.genmake.$$
 tail -5 TTT.genmake.$$
 echo ' --- make depend (atm):'
 make depend > TTT.mkdepend.$$
 tail -10 TTT.mkdepend.$$
 echo ' --- make (atm):'
 make > TTT.make.$$ 2>&1
 tail -10 TTT.make.$$
 echo ' ' ; cd $dir

 ls -l build_???/mitgcmuv

fi

if test $kpr = 2
then
  /bin/rm -r -f rank_0 rank_1 rank_2
  cp -p -r input_cpl rank_0
  cp -p -r input_ocn rank_1
  cp -p -r input_atm rank_2

  cd rank_1
  ./IMPORT_INPUT_FILES
  cd $dir

  cd rank_2
  ./SHARE_OCN_GRID '../rank_1'
  ./IMPORT_INPUT_FILES
  cd $dir

fi

if test $kpr = 3
then
 ROOTDIR=$dir
 rm -f rank_?/pickup*.ckptA.00?.00?.??ta
 echo $ROOTDIR
 tmpfil=TTT.$$

 echo $PBS_NODEFILE
 list=`cat $PBS_NODEFILE`
 rm -f pr_group ; touch pr_group 
 nc=0 ; dd1=cpl ; 
 for xx in $list
 do
  echo $xx $nc $dir/build_$dd1/mitgcmuv >> pr_group
  if test $nc = 0 ; then dd1=ocn ; else dd1=atm ; fi
  nc=1
 done

 cd $ROOTDIR
 #  -wd $ROOTDIR
 /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group --gm-kill 5 -v  ./build_cpl/mitgcmuv > std_outp 2>&1
 tail -20 std_outp
 ls -l rank_?/pickup*.ckptA.001.001.data

fi

if test $kpr = 4
then

 if test -f rank_1/STDOUT.0000
 then echo '==> check Ocean output:'
    /home/jmc/bin/comp_res rank_1/STDOUT.0000 results/ocnSTDOUT.0000
   echo ' '
 else echo 'No Ocean output file in rank_1' ; fi

 if test -f rank_2/STDOUT.0000
 then 
    echo '==> check Atmos output:'
    /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000
    echo '==> check Land output:'
    /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 L
    echo '==> check thSIce output:'
    /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 I
   echo ' '
 else echo 'No Atmos output file in rank_1' ; fi

fi

exit 0
1	jmc	1.1	#! /bin/sh
2
3	jmc	1.7	# $Header: /u/gcmpack/MITgcm/verification/cpl_aim+ocn/run_cpl_test,v 1.6 2004/11/07 23:30:32 jmc Exp $
4	jmc	1.1	# $Name: $
5
6			Np=3
7	jmc	1.5	Opt=' '
8			Opt='-ieee'
9	jmc	1.1	if [ $# -lt 1 ]
10			then
11			echo 'Usage:'`basename $0`' step '
12			echo ' => test coupled set-up on myrinet cluster'
13			echo 'step = 0 : clean all directories'
14			echo 'step = 1 : compile the 3 executables (cpl,ocn,atm)'
15			echo 'step = 2 : copy input files and dir(s)'
16			echo "step = 3 : run on $Np processor"
17			echo 'step = 4 : check the results'
18			exit
19			fi
20			kpr=$1
21			dir=`pwd`
22
23			#- only works from a 3 nodes PBS bach session ( qsub -I -l nodes=3:p4 )
24			# on myrinet cluster:
25			xx=`hostname \| sed 's/[0-9]/X/g'`
26			if test $xx != 'myrinet-X-XX'
27			then
28			echo ' hostname='`hostname`
29			echo 'for now, works only on myrinet cluster'
30			exit 9
31			fi
32			if test 'dummy'$PBS_NODEFILE = 'dummy'
33			then
34			echo ' $PBS_NODEFILE not defined'
35			echo "for now, works only from a $Np nodes PBS bach session"
36			exit 8
37			else ncpus=`wc -l $PBS_NODEFILE \| awk '{print $1}'`
38			if test $ncpus != $Np ; then
39			echo ' Nb of nodes from $PBS_NODEFILE =' $ncpus
40			echo "for now, works only from a $Np nodes PBS bach session"
41			exit 8
42			fi
43			fi
44
45			#============================================================================
46
47			if test $kpr = 0
48			then
49	jmc	1.6	rm -f genmake_optfile pr_group std_outp
50	jmc	1.1	rm -f build_???/TTT.make. build_???/TTT.mkdepend.*
51			/bin/rm -r -f rank_0 rank_1 rank_2
52			if test -f build_cpl/Makefile ; then cd build_cpl ; make CLEAN ; cd .. ; fi
53			if test -f build_ocn/Makefile ; then cd build_ocn ; make CLEAN ; cd .. ; fi
54			if test -f build_atm/Makefile ; then cd build_atm ; make CLEAN ; cd .. ; fi
55			fi
56
57			if test $kpr = 1
58			then
59
60	edhill	1.3	cp -p ../../tools/build_options/linux_ia32_ifc+mpi_cg01 genmake_optfile
61	jmc	1.1	echo '==== compile coupler:'
62			cd build_cpl
63			echo ' --- genmake2 (cpl):'
64	jmc	1.5	../../../tools/genmake2 -of ../genmake_optfile $Opt > TTT.genmake.$$
65	jmc	1.1	tail -5 TTT.genmake.$$
66			echo ' --- make depend (cpl):'
67			make depend > TTT.mkdepend.$$
68			tail -5 TTT.mkdepend.$$
69			echo ' --- make (cpl):'
70			make > TTT.make.$$ 2>&1
71			tail -10 TTT.make.$$
72			echo ' ' ; cd $dir
73
74			echo '==== compile OGCM:'
75			cd build_ocn
76			echo ' --- genmake2 (ocn):'
77	jmc	1.5	../../../tools/genmake2 -of ../genmake_optfile $Opt > TTT.genmake.$$
78	jmc	1.1	tail -5 TTT.genmake.$$
79			echo ' --- make depend (ocn):'
80			make depend > TTT.mkdepend.$$
81			tail -10 TTT.mkdepend.$$
82			echo ' --- make (ocn):'
83			make > TTT.make.$$ 2>&1
84			tail -10 TTT.make.$$
85			echo ' ' ; cd $dir
86
87			echo '==== compile AGCM:'
88			cd build_atm
89			echo ' --- genmake2 (atm):'
90	jmc	1.5	../../../tools/genmake2 -of ../genmake_optfile $Opt > TTT.genmake.$$
91	jmc	1.1	tail -5 TTT.genmake.$$
92			echo ' --- make depend (atm):'
93			make depend > TTT.mkdepend.$$
94			tail -10 TTT.mkdepend.$$
95			echo ' --- make (atm):'
96			make > TTT.make.$$ 2>&1
97			tail -10 TTT.make.$$
98			echo ' ' ; cd $dir
99
100			ls -l build_???/mitgcmuv
101
102			fi
103
104			if test $kpr = 2
105			then
106	jmc	1.7	/bin/rm -r -f rank_0 rank_1 rank_2
107	jmc	1.1	cp -p -r input_cpl rank_0
108			cp -p -r input_ocn rank_1
109			cp -p -r input_atm rank_2
110
111			cd rank_1
112			./IMPORT_INPUT_FILES
113			cd $dir
114
115			cd rank_2
116			./SHARE_OCN_GRID '../rank_1'
117	jmc	1.7	./IMPORT_INPUT_FILES
118	jmc	1.1	cd $dir
119
120			fi
121
122			if test $kpr = 3
123			then
124			ROOTDIR=$dir
125			rm -f rank_?/pickup*.ckptA.00?.00?.??ta
126			echo $ROOTDIR
127			tmpfil=TTT.$$
128
129			echo $PBS_NODEFILE
130			list=`cat $PBS_NODEFILE`
131			rm -f pr_group ; touch pr_group
132			nc=0 ; dd1=cpl ;
133			for xx in $list
134			do
135			echo $xx $nc $dir/build_$dd1/mitgcmuv >> pr_group
136			if test $nc = 0 ; then dd1=ocn ; else dd1=atm ; fi
137			nc=1
138			done
139
140			cd $ROOTDIR
141	edhill	1.4	# -wd $ROOTDIR
142			/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group --gm-kill 5 -v ./build_cpl/mitgcmuv > std_outp 2>&1
143	jmc	1.1	tail -20 std_outp
144			ls -l rank_?/pickup*.ckptA.001.001.data
145
146			fi
147
148			if test $kpr = 4
149			then
150
151			if test -f rank_1/STDOUT.0000
152			then echo '==> check Ocean output:'
153			/home/jmc/bin/comp_res rank_1/STDOUT.0000 results/ocnSTDOUT.0000
154			echo ' '
155			else echo 'No Ocean output file in rank_1' ; fi
156
157			if test -f rank_2/STDOUT.0000
158			then
159			echo '==> check Atmos output:'
160			/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000
161			echo '==> check Land output:'
162			/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 L
163			echo '==> check thSIce output:'
164			/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 I
165			echo ' '
166			else echo 'No Atmos output file in rank_1' ; fi
167
168			fi
169
170			exit 0