Annotation of /MITgcm/verification/cpl_aim+ocn/run_cpl_test

#! /bin/sh

# $Header: /u/gcmpack/MITgcm/verification/cpl_aim+ocn/run_cpl_test,v 1.1 2004/10/09 20:08:46 jmc Exp $
# $Name:  $

Np=3
if [ $# -lt 1 ]
then
  echo 'Usage:'`basename $0`' step '
  echo ' => test coupled set-up on myrinet cluster'
  echo 'step = 0 : clean all directories'
  echo 'step = 1 : compile the 3 executables (cpl,ocn,atm)'
  echo 'step = 2 : copy input files and dir(s)'
  echo "step = 3 : run on $Np processor"
  echo 'step = 4 : check the results'
  exit
fi
kpr=$1
dir=`pwd`

#- only works from a 3 nodes PBS bach session ( qsub -I -l nodes=3:p4 )
#  on myrinet cluster:
xx=`hostname | sed 's/[0-9]/X/g'`
if test $xx != 'myrinet-X-XX'
then
  echo ' hostname='`hostname`
  echo 'for now, works only on myrinet cluster'
  exit 9
fi
if test 'dummy'$PBS_NODEFILE = 'dummy'
then
  echo ' $PBS_NODEFILE not defined'
  echo "for now, works only from a $Np nodes PBS bach session"
  exit 8
else ncpus=`wc -l $PBS_NODEFILE | awk '{print $1}'`
 if test $ncpus != $Np ; then
  echo ' Nb of nodes from $PBS_NODEFILE =' $ncpus
  echo "for now, works only from a $Np nodes PBS bach session"
  exit 8
 fi
fi

#============================================================================

if test $kpr = 0
then
 rm -f genmake_optfile pr_group std_outp 
 rm -f build_???/TTT.*make.* build_???/TTT.mkdepend.*
 /bin/rm -r -f rank_0 rank_1 rank_2
 if test -f build_cpl/Makefile ; then cd build_cpl ; make CLEAN ; cd .. ; fi
 if test -f build_ocn/Makefile ; then cd build_ocn ; make CLEAN ; cd .. ; fi
 if test -f build_atm/Makefile ; then cd build_atm ; make CLEAN ; cd .. ; fi
fi

if test $kpr = 1
then

 # cp -p ../../tools/build_options/linux_ia32_ifc+mpi_cg01 genmake_optfile
 cp optfile genmake_optfile
 echo '==== compile coupler:'
 cd build_cpl
 echo ' --- genmake2 (cpl):'
 ../../../tools/genmake2 -of ../genmake_optfile -ieee >  TTT.genmake.$$
 tail -5 TTT.genmake.$$
 echo ' --- make depend (cpl):'
 make depend > TTT.mkdepend.$$
 tail -5 TTT.mkdepend.$$
 echo ' --- make (cpl):'
 make > TTT.make.$$ 2>&1
 tail -10 TTT.make.$$
 echo ' ' ; cd $dir

 echo '==== compile OGCM:'
 cd build_ocn
 echo ' --- genmake2 (ocn):'
 ../../../tools/genmake2 -of ../genmake_optfile -ieee >  TTT.genmake.$$
 tail -5 TTT.genmake.$$
 echo ' --- make depend (ocn):'
 make depend > TTT.mkdepend.$$
 tail -10 TTT.mkdepend.$$
 echo ' --- make (ocn):'
 make > TTT.make.$$ 2>&1
 tail -10 TTT.make.$$
 echo ' ' ; cd $dir

 echo '==== compile AGCM:'
 cd build_atm
 echo ' --- genmake2 (atm):'
 ../../../tools/genmake2 -of ../genmake_optfile -ieee >  TTT.genmake.$$
 tail -5 TTT.genmake.$$
 echo ' --- make depend (atm):'
 make depend > TTT.mkdepend.$$
 tail -10 TTT.mkdepend.$$
 echo ' --- make (atm):'
 make > TTT.make.$$ 2>&1
 tail -10 TTT.make.$$
 echo ' ' ; cd $dir

 ls -l build_???/mitgcmuv

fi

if test $kpr = 2
then
  cp -p -r input_cpl rank_0
  cp -p -r input_ocn rank_1
  cp -p -r input_atm rank_2

  cd rank_1
  ./IMPORT_INPUT_FILES
  cd $dir

  cd rank_2
  ./SHARE_OCN_GRID '../rank_1'
  cd $dir

  mkdir cpl ocn atm
  if test -f build_cpl/mitgcmuv ; then cp -p build_cpl/mitgcmuv cpl
  else echo 'file: build_cpl/mitgcmuv not found => stop'; exit; fi
  if test -f build_ocn/mitgcmuv ; then cp -p build_ocn/mitgcmuv ocn
  else echo 'file: build_ocn/mitgcmuv not found => stop'; exit; fi
  if test -f build_atm/mitgcmuv ; then cp -p build_atm/mitgcmuv atm
  else echo 'file: build_atm/mitgcmuv not found => stop'; exit; fi

fi

if test $kpr = 3
then
 ROOTDIR=$dir
 rm -f rank_?/pickup*.ckptA.00?.00?.??ta
 echo $ROOTDIR
 tmpfil=TTT.$$

 echo $PBS_NODEFILE
 list=`cat $PBS_NODEFILE`
 rm -f pr_group ; touch pr_group 
 nc=0 ; dd1=cpl ; 
 for xx in $list
 do
  echo $xx $nc $dir/build_$dd1/mitgcmuv >> pr_group
  if test $nc = 0 ; then dd1=ocn ; else dd1=atm ; fi
  nc=1
 done

 cd $ROOTDIR
 /usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group -wd $ROOTDIR --gm-kill 5 -v  ./build_cpl/mitgcmuv > std_outp 2>&1
 tail -20 std_outp
 ls -l rank_?/pickup*.ckptA.001.001.data

fi

if test $kpr = 4
then

 if test -f rank_1/STDOUT.0000
 then echo '==> check Ocean output:'
    /home/jmc/bin/comp_res rank_1/STDOUT.0000 results/ocnSTDOUT.0000
   echo ' '
 else echo 'No Ocean output file in rank_1' ; fi

 if test -f rank_2/STDOUT.0000
 then 
    echo '==> check Atmos output:'
    /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000
    echo '==> check Land output:'
    /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 L
    echo '==> check thSIce output:'
    /home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 I
   echo ' '
 else echo 'No Atmos output file in rank_1' ; fi

fi

exit 0
1	jmc	1.1	#! /bin/sh
2
3	edhill	1.2	# $Header: /u/gcmpack/MITgcm/verification/cpl_aim+ocn/run_cpl_test,v 1.1 2004/10/09 20:08:46 jmc Exp $
4	jmc	1.1	# $Name: $
5
6			Np=3
7			if [ $# -lt 1 ]
8			then
9			echo 'Usage:'`basename $0`' step '
10			echo ' => test coupled set-up on myrinet cluster'
11			echo 'step = 0 : clean all directories'
12			echo 'step = 1 : compile the 3 executables (cpl,ocn,atm)'
13			echo 'step = 2 : copy input files and dir(s)'
14			echo "step = 3 : run on $Np processor"
15			echo 'step = 4 : check the results'
16			exit
17			fi
18			kpr=$1
19			dir=`pwd`
20
21			#- only works from a 3 nodes PBS bach session ( qsub -I -l nodes=3:p4 )
22			# on myrinet cluster:
23			xx=`hostname \| sed 's/[0-9]/X/g'`
24			if test $xx != 'myrinet-X-XX'
25			then
26			echo ' hostname='`hostname`
27			echo 'for now, works only on myrinet cluster'
28			exit 9
29			fi
30			if test 'dummy'$PBS_NODEFILE = 'dummy'
31			then
32			echo ' $PBS_NODEFILE not defined'
33			echo "for now, works only from a $Np nodes PBS bach session"
34			exit 8
35			else ncpus=`wc -l $PBS_NODEFILE \| awk '{print $1}'`
36			if test $ncpus != $Np ; then
37			echo ' Nb of nodes from $PBS_NODEFILE =' $ncpus
38			echo "for now, works only from a $Np nodes PBS bach session"
39			exit 8
40			fi
41			fi
42
43			#============================================================================
44
45			if test $kpr = 0
46			then
47			rm -f genmake_optfile pr_group std_outp
48			rm -f build_???/TTT.make. build_???/TTT.mkdepend.*
49			/bin/rm -r -f rank_0 rank_1 rank_2
50			if test -f build_cpl/Makefile ; then cd build_cpl ; make CLEAN ; cd .. ; fi
51			if test -f build_ocn/Makefile ; then cd build_ocn ; make CLEAN ; cd .. ; fi
52			if test -f build_atm/Makefile ; then cd build_atm ; make CLEAN ; cd .. ; fi
53			fi
54
55			if test $kpr = 1
56			then
57
58	edhill	1.2	# cp -p ../../tools/build_options/linux_ia32_ifc+mpi_cg01 genmake_optfile
59			cp optfile genmake_optfile
60	jmc	1.1	echo '==== compile coupler:'
61			cd build_cpl
62			echo ' --- genmake2 (cpl):'
63			../../../tools/genmake2 -of ../genmake_optfile -ieee > TTT.genmake.$$
64			tail -5 TTT.genmake.$$
65			echo ' --- make depend (cpl):'
66			make depend > TTT.mkdepend.$$
67			tail -5 TTT.mkdepend.$$
68			echo ' --- make (cpl):'
69			make > TTT.make.$$ 2>&1
70			tail -10 TTT.make.$$
71			echo ' ' ; cd $dir
72
73			echo '==== compile OGCM:'
74			cd build_ocn
75			echo ' --- genmake2 (ocn):'
76			../../../tools/genmake2 -of ../genmake_optfile -ieee > TTT.genmake.$$
77			tail -5 TTT.genmake.$$
78			echo ' --- make depend (ocn):'
79			make depend > TTT.mkdepend.$$
80			tail -10 TTT.mkdepend.$$
81			echo ' --- make (ocn):'
82			make > TTT.make.$$ 2>&1
83			tail -10 TTT.make.$$
84			echo ' ' ; cd $dir
85
86			echo '==== compile AGCM:'
87			cd build_atm
88			echo ' --- genmake2 (atm):'
89			../../../tools/genmake2 -of ../genmake_optfile -ieee > TTT.genmake.$$
90			tail -5 TTT.genmake.$$
91			echo ' --- make depend (atm):'
92			make depend > TTT.mkdepend.$$
93			tail -10 TTT.mkdepend.$$
94			echo ' --- make (atm):'
95			make > TTT.make.$$ 2>&1
96			tail -10 TTT.make.$$
97			echo ' ' ; cd $dir
98
99			ls -l build_???/mitgcmuv
100
101			fi
102
103			if test $kpr = 2
104			then
105			cp -p -r input_cpl rank_0
106			cp -p -r input_ocn rank_1
107			cp -p -r input_atm rank_2
108
109			cd rank_1
110			./IMPORT_INPUT_FILES
111			cd $dir
112
113			cd rank_2
114			./SHARE_OCN_GRID '../rank_1'
115			cd $dir
116
117			mkdir cpl ocn atm
118			if test -f build_cpl/mitgcmuv ; then cp -p build_cpl/mitgcmuv cpl
119			else echo 'file: build_cpl/mitgcmuv not found => stop'; exit; fi
120			if test -f build_ocn/mitgcmuv ; then cp -p build_ocn/mitgcmuv ocn
121			else echo 'file: build_ocn/mitgcmuv not found => stop'; exit; fi
122			if test -f build_atm/mitgcmuv ; then cp -p build_atm/mitgcmuv atm
123			else echo 'file: build_atm/mitgcmuv not found => stop'; exit; fi
124
125			fi
126
127			if test $kpr = 3
128			then
129			ROOTDIR=$dir
130			rm -f rank_?/pickup*.ckptA.00?.00?.??ta
131			echo $ROOTDIR
132			tmpfil=TTT.$$
133
134			echo $PBS_NODEFILE
135			list=`cat $PBS_NODEFILE`
136			rm -f pr_group ; touch pr_group
137			nc=0 ; dd1=cpl ;
138			for xx in $list
139			do
140			echo $xx $nc $dir/build_$dd1/mitgcmuv >> pr_group
141			if test $nc = 0 ; then dd1=ocn ; else dd1=atm ; fi
142			nc=1
143			done
144
145			cd $ROOTDIR
146			/usr/local/pkg/mpi/mpi-1.2.4..8a-gm-1.5/pgi/bin/mpirun.ch_gm -pg pr_group -wd $ROOTDIR --gm-kill 5 -v ./build_cpl/mitgcmuv > std_outp 2>&1
147			tail -20 std_outp
148			ls -l rank_?/pickup*.ckptA.001.001.data
149
150			fi
151
152			if test $kpr = 4
153			then
154
155			if test -f rank_1/STDOUT.0000
156			then echo '==> check Ocean output:'
157			/home/jmc/bin/comp_res rank_1/STDOUT.0000 results/ocnSTDOUT.0000
158			echo ' '
159			else echo 'No Ocean output file in rank_1' ; fi
160
161			if test -f rank_2/STDOUT.0000
162			then
163			echo '==> check Atmos output:'
164			/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000
165			echo '==> check Land output:'
166			/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 L
167			echo '==> check thSIce output:'
168			/home/jmc/bin/comp_res rank_2/STDOUT.0000 results/atmSTDOUT.0000 I
169			echo ' '
170			else echo 'No Atmos output file in rank_1' ; fi
171
172			fi
173
174			exit 0