utils/matlab/pcolorfv.m

function [hc,hh,hcf] = pcolorfv(x,z,h,a,varargin)
% PCOLORFV(X,Z,H,A)
%
% Is the same as PCOLORFV except it automatically extends the dataset
% to the depth of the topography "H". This is srictly for plotting
% vertical (x,z) sections in conjuction with "partial cells" in the MITgcm.
%
% X is horizontal coordinate (vector)
% Z is vertical coordinate (vector)
% H is depth of bottom (vector)
% A is field to be plotted (matrix)
%
% Optional arguments are passed on to PCOLOR
%
% $Header: /u/gcmpack/models/MITgcmUV/utils/matlab/pcolorfv.m,v 1.1 2001/11/21 19:18:10 adcroft Exp $

nx=prod(size(x));
nz=prod(size(z));
%max(size(h))
%prod(size(h))
if max(size(h)) ~= prod(size(h)) | prod(size(h)) ~= nx
 error('H must have dimensions of size(X)');
end
%ndims(squeeze(a))
%size(squeeze(a))
if ndims(squeeze(a)) ~= 2 | sum(size(squeeze(a)) ~= [nx nz])
 error('A must have dimensions of size(X) x size(H)');
end

% Create extended Z coordinate
zz=zeros(1,nz+2);
zz(2:nz+1)=z;
zz(1)=0;
zz(nz+2)=1.5*z(nz)-0.5*z(nz-1);

[Z,X]=meshgrid(zz,x);

aa=squeeze(a);
au=aa(:,[1 1:nz-1]);
aa(isnan(aa))=au(isnan(aa));
A=zeros(nx,nz+2);
A(:,2:nz+1)=aa;
A(:,1)=aa(:,1);
A(:,nz+2)=aa(:,nz);
clear aa au

[Hz,Hx]=meshgrid(zz,h);
clear Hz


% H might be positive...
if min(z)*min(h) > 0
 Z=max(Z,Hx);
else
 Z=max(Z,-Hx);
end
clear Hx

pcolor(X,Z,A,varargin{:});
1	function [hc,hh,hcf] = pcolorfv(x,z,h,a,varargin)
2	% PCOLORFV(X,Z,H,A)
3	%
4	% Is the same as PCOLORFV except it automatically extends the dataset
5	% to the depth of the topography "H". This is srictly for plotting
6	% vertical (x,z) sections in conjuction with "partial cells" in the MITgcm.
7	%
8	% X is horizontal coordinate (vector)
9	% Z is vertical coordinate (vector)
10	% H is depth of bottom (vector)
11	% A is field to be plotted (matrix)
12	%
13	% Optional arguments are passed on to PCOLOR
14	%
15	% $Header: /u/gcmpack/models/MITgcmUV/utils/matlab/pcolorfv.m,v 1.1 2001/11/21 19:18:10 adcroft Exp $
16
17	nx=prod(size(x));
18	nz=prod(size(z));
19	%max(size(h))
20	%prod(size(h))
21	if max(size(h)) ~= prod(size(h)) \| prod(size(h)) ~= nx
22	error('H must have dimensions of size(X)');
23	end
24	%ndims(squeeze(a))
25	%size(squeeze(a))
26	if ndims(squeeze(a)) ~= 2 \| sum(size(squeeze(a)) ~= [nx nz])
27	error('A must have dimensions of size(X) x size(H)');
28	end
29
30	% Create extended Z coordinate
31	zz=zeros(1,nz+2);
32	zz(2:nz+1)=z;
33	zz(1)=0;
34	zz(nz+2)=1.5z(nz)-0.5z(nz-1);
35
36	[Z,X]=meshgrid(zz,x);
37
38	aa=squeeze(a);
39	au=aa(:,[1 1:nz-1]);
40	aa(isnan(aa))=au(isnan(aa));
41	A=zeros(nx,nz+2);
42	A(:,2:nz+1)=aa;
43	A(:,1)=aa(:,1);
44	A(:,nz+2)=aa(:,nz);
45	clear aa au
46
47	[Hz,Hx]=meshgrid(zz,h);
48	clear Hz
49
50
51	% H might be positive...
52	if min(z)*min(h) > 0
53	Z=max(Z,Hx);
54	else
55	Z=max(Z,-Hx);
56	end
57	clear Hx
58
59	pcolor(X,Z,A,varargin{:});