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Revision 1.87 - (view) (download) (annotate) - [select for diffs]
Mon Oct 6 20:38:40 2003 UTC (16 years, 6 months ago) by stephd
Branch: MAIN
CVS Tags: checkpoint51h_pre, checkpoint51i_post, checkpoint51i_pre, checkpoint51j_post, checkpoint51k_post, checkpoint51l_pre
Branch point for: tg2-branch
Changes since 1.86: +2 -2 lines
Diff to previous 1.86
disable pkg/cfc


Revision 1.86 - (view) (download) (annotate) - [select for diffs]
Fri Oct 3 14:09:51 2003 UTC (16 years, 6 months ago) by heimbach
Branch: MAIN
Changes since 1.85: +2 -2 lines
Diff to previous 1.85
remove admlm package


Revision 1.85 - (view) (download) (annotate) - [select for diffs]
Fri Oct 3 04:42:58 2003 UTC (16 years, 6 months ago) by dimitri
Branch: MAIN
Changes since 1.84: +3 -2 lines
Diff to previous 1.84
Modified ocean_inversion_project/input/data and tools/genmake


Revision 1.84 - (view) (download) (annotate) - [select for diffs]
Thu Oct 2 21:30:22 2003 UTC (16 years, 6 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint51g_post
Changes since 1.83: +28 -5 lines
Diff to previous 1.83
provide ARPACK interface


Revision 1.83 - (view) (download) (annotate) - [select for diffs]
Wed Sep 17 18:24:51 2003 UTC (16 years, 6 months ago) by dimitri
Branch: MAIN
CVS Tags: branchpoint-genmake2, checkpoint51f_post
Branch point for: branch-genmake2
Changes since 1.82: +14 -1 lines
Diff to previous 1.82
added "preliminary" support for SGI Altix in tools/genmake


Revision 1.82 - (view) (download) (annotate) - [select for diffs]
Fri Jun 27 01:59:09 2003 UTC (16 years, 9 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint51b_post, checkpoint51c_post, checkpoint51d_post, checkpoint51e_post, checkpoint51f_pre
Changes since 1.81: +2 -2 lines
Diff to previous 1.81
extended DISABLE list


Revision 1.81 - (view) (download) (annotate) - [select for diffs]
Wed Jun 25 21:56:49 2003 UTC (16 years, 9 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint51b_pre
Changes since 1.80: +2 -2 lines
Diff to previous 1.80
disable dic, gchem by default.


Revision 1.80 - (view) (download) (annotate) - [select for diffs]
Tue May 20 12:59:42 2003 UTC (16 years, 10 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint50f_post, checkpoint50f_pre, checkpoint50g_post, checkpoint50h_post, checkpoint50i_post, checkpoint51, checkpoint51a_post
Changes since 1.79: +2 -1 lines
Diff to previous 1.79
Added removal of fort.* files.


Revision 1.79 - (view) (download) (annotate) - [select for diffs]
Thu May 15 17:19:25 2003 UTC (16 years, 10 months ago) by adcroft
Branch: MAIN
Changes since 1.78: +5 -5 lines
Diff to previous 1.78
Changed initialization of variables so that defaults can be set in the users
environment.
 e.g.  setenv platform="myblessedmachine.com" in .cshrc


Revision 1.78 - (view) (download) (annotate) - [select for diffs]
Wed May 14 14:48:30 2003 UTC (16 years, 10 months ago) by heimbach
Branch: MAIN
Changes since 1.77: +13 -1 lines
Diff to previous 1.77
dding platform aer-linux-cluster+mpi
NB: Need to merge genmake  between MAIN branch and ecco-branch
    they've diverged a lot


Revision 1.77 - (view) (download) (annotate) - [select for diffs]
Wed May 14 09:21:13 2003 UTC (16 years, 10 months ago) by mlosch
Branch: MAIN
CVS Tags: checkpoint50e_post
Changes since 1.76: +16 -1 lines
Diff to previous 1.76
o add a new platform SunFire+mpi (SunFire 15000) to genmake


Revision 1.76 - (view) (download) (annotate) - [select for diffs]
Wed Mar 19 23:25:53 2003 UTC (17 years ago) by jmc
Branch: MAIN
CVS Tags: checkpoint50a_post, checkpoint50b_post, checkpoint50b_pre, checkpoint50c_post, checkpoint50c_pre, checkpoint50d_post, checkpoint50d_pre, checkpoint50e_pre
Changes since 1.75: +4 -3 lines
Diff to previous 1.75
 NOOPTFILES & NOOPTFLAGS not reset if already defined (.e.g in .genmakerc)


Revision 1.75 - (view) (download) (annotate) - [select for diffs]
Fri Feb 28 02:52:49 2003 UTC (17 years, 1 month ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint48i_post, checkpoint49, checkpoint50
Changes since 1.74: +31 -1 lines
Diff to previous 1.74
Adding -platform=SP4
Modif. for DEC Alpha (many dont have makedepend; use mkdep instead).


Revision 1.74 - (view) (download) (annotate) - [select for diffs]
Tue Feb 18 05:33:55 2003 UTC (17 years, 1 month ago) by dimitri
Branch: MAIN
CVS Tags: checkpoint48f_post, checkpoint48g_post, checkpoint48h_post
Changes since 1.73: +20 -1 lines
Diff to previous 1.73
Merging from release1_p12:
o Modifications for using pkg/exf with pkg/seaice
  - improved description of the various forcing configurations
  - added basic radiation bulk formulae to pkg/exf
  - units/sign fix for evap computation in exf_getffields.F
  - updated verification/global_with_exf/results/output.txt
o Added pkg/sbo for computing IERS Special Bureau for the Oceans
  (SBO) core products, including oceanic mass, center-of-mass,
  angular, and bottom pressure (see pkg/sbo/README.sbo).
o Lower bound for viscosity/diffusivity in pkg/kpp/kpp_routines.F
  to avoid negative values in shallow regions.
  - updated verification/natl_box/results/output.txt
  - updated verification/lab_sea/results/output.txt
o MPI gather, scatter: eesupp/src/gather_2d.F and scatter_2d.F
o Added useSingleCpuIO option (see PARAMS.h).
o Updated useSingleCpuIO option in mdsio_writefield.F to
  work with multi-field files, e.g., for single-file pickup.
o pkg/seaice:
  - bug fix in growth.F: QNET for no shortwave case
  - added HeffFile for specifying initial sea-ice thickness
  - changed SEAICE_EXTERNAL_FLUXES wind stress implementation
o Added missing /* */ to CPP comments in pkg/seaice, pkg/exf,
  kpp_transport_t.F, forward_step.F, and the_main_loop.F
o pkg/seaice:
  - adjoint-friendly modifications
  - added a SEAICE_WRITE_PICKUP at end of the_model_main.F


Revision 1.73 - (view) (download) (annotate) - [select for diffs]
Thu Dec 5 08:43:03 2002 UTC (17 years, 4 months ago) by dimitri
Branch: MAIN
CVS Tags: branch-exfmods-tag, checkpoint47b_post, checkpoint47c_post, checkpoint47d_post, checkpoint47d_pre, checkpoint47e_post, checkpoint47f_post, checkpoint47g_post, checkpoint47h_post, checkpoint47i_post, checkpoint47j_post, checkpoint48, checkpoint48a_post, checkpoint48b_post, checkpoint48c_post, checkpoint48c_pre, checkpoint48d_post, checkpoint48d_pre, checkpoint48e_post
Branch point for: branch-exfmods-curt
Changes since 1.72: +13 -7 lines
Diff to previous 1.72
checkpoint47b_post
Merging from release1_p9:
o pkg/seaice
  - removed GOTO's and added taf directives
  - double precision constants to reduce the g77 (Linux)
    to F77 (SGI) differences reported in release1_p8
o tools/genmake
  - added SGI options
o verification/testscript
  - updated to that of checkpoint47a_post
o verification/global_ocean.90x40x15/input/eedata
  - modified for SGI f77 compatibility
o verification/lab_sea
  - added description of sea-ice model
  - added missing matlab routines
  - added test of thermodynamics parallelization
Modified Files:
   doc/tag-index pkg/seaice/SEAICE_FFIELDS.h
   pkg/seaice/SEAICE_PARAMS.h pkg/seaice/adi.F
   pkg/seaice/advect.F pkg/seaice/budget.F pkg/seaice/diffus.F
   pkg/seaice/dynsolver.F pkg/seaice/groatb.F pkg/seaice/growth.F
   pkg/seaice/lsr.F pkg/seaice/ostres.F
   pkg/seaice/seaice_do_diags.F pkg/seaice/seaice_get_forcing.F
   pkg/seaice/seaice_init.F pkg/seaice/seaice_model.F
   pkg/seaice/seaice_readparms.F tools/genmake
   verification/global_ocean.90x40x15/input/eedata
   verification/lab_sea/README
   verification/lab_sea/matlab/lookat_exp1.m
   verification/lab_sea/matlab/lookat_exp2.m
   verification/lab_sea/matlab/lookat_exp3.m
   verification/lab_sea/matlab/lookat_exp4.m
   verification/lab_sea/matlab/lookat_exp5.m
   verification/lab_sea/matlab/lookat_exp6.m
   verification/lab_sea/results/AREAtave.0000000010.data
   verification/lab_sea/results/HEFFtave.0000000010.data
   verification/lab_sea/results/UICEtave.0000000010.data
   verification/lab_sea/results/VICEtave.0000000010.data
   verification/lab_sea/results/output.txt
Added Files:
   verification/lab_sea/seaice.ps
   verification/lab_sea/matlab/lookat_exp7.m
   verification/lab_sea/matlab/mmax.m
   verification/lab_sea/matlab/mypcolor.m
   verification/lab_sea/matlab/myquiver.m
   verification/lab_sea/matlab/readbin.m
   verification/lab_sea/matlab/wysiwyg.m
Removed Files:
   verification/lab_sea/code/KPP_OPTIONS.h


Revision 1.72 - (view) (download) (annotate) - [select for diffs]
Thu Nov 21 19:36:38 2002 UTC (17 years, 4 months ago) by cheisey
Branch: MAIN
CVS Tags: checkpoint47a_post
Changes since 1.71: +2 -2 lines
Diff to previous 1.71
Turning off bulk_force and therm_seaice by default.


Revision 1.71 - (view) (download) (annotate) - [select for diffs]
Fri Nov 15 20:19:38 2002 UTC (17 years, 4 months ago) by cheisey
Branch: MAIN
Changes since 1.70: +2 -2 lines
Diff to previous 1.70
Turning off thermodynamic_seaice and bulk_forcing by default.


Revision 1.70 - (view) (download) (annotate) - [select for diffs]
Fri Nov 15 17:18:57 2002 UTC (17 years, 4 months ago) by cheisey
Branch: MAIN
Changes since 1.69: +12 -1 lines
Diff to previous 1.69
Added platform custom option "c01+pgi" for using Portland
f90 compiler on the myrinet-3 cluster.


Revision 1.69 - (view) (download) (annotate) - [select for diffs]
Tue Nov 12 20:45:41 2002 UTC (17 years, 4 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint46n_post, checkpoint47
Changes since 1.68: +2 -2 lines
Diff to previous 1.68
Merging from release1_p8 branch:
Adding package parameters and hooks for new seaice package.


Revision 1.68 - (view) (download) (annotate) - [select for diffs]
Mon Nov 4 17:43:36 2002 UTC (17 years, 5 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint46m_post
Changes since 1.67: +2 -2 lines
Diff to previous 1.67
I finally give in: g77 is now the first compiler in the list
of compilers to search for. The only way to get the others
is to specify -fc on the genmake command line. It's a shame
since ifc is better but now that ifc is in /usr/local it
is impossible to use testscript meaningfully...


Revision 1.67 - (view) (download) (annotate) - [select for diffs]
Tue Oct 29 19:38:07 2002 UTC (17 years, 5 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint46l_post, checkpoint46l_pre
Changes since 1.66: +2 -2 lines
Diff to previous 1.66
Fix for Fujitsu suggested by Naoki Hirose.
 - added "-print" to "find" when searching packages.


Revision 1.66 - (view) (download) (annotate) - [select for diffs]
Thu Aug 8 15:24:00 2002 UTC (17 years, 8 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint46c_post, checkpoint46c_pre, checkpoint46d_post, checkpoint46d_pre, checkpoint46e_post, checkpoint46e_pre, checkpoint46f_post, checkpoint46g_post, checkpoint46g_pre, checkpoint46h_post, checkpoint46h_pre, checkpoint46i_post, checkpoint46j_post, checkpoint46j_pre, checkpoint46k_post
Changes since 1.65: +3 -1 lines
Diff to previous 1.65
Missing CPP define for pkg/debug


Revision 1.65 - (view) (download) (annotate) - [select for diffs]
Wed Aug 7 19:57:48 2002 UTC (17 years, 8 months ago) by adcroft
Branch: MAIN
Changes since 1.64: +4 -2 lines
Diff to previous 1.64
Damn, I hate SUNs.


Revision 1.64 - (view) (download) (annotate) - [select for diffs]
Wed Aug 7 19:48:44 2002 UTC (17 years, 8 months ago) by adcroft
Branch: MAIN
Changes since 1.63: +9 -2 lines
Diff to previous 1.63
Well, who'd have guessed that SUN ship g77 by default! I'm restricting
the automatic search of compilers to Linux platforms until we do
a general tidy up of genmake.


Revision 1.63 - (view) (download) (annotate) - [select for diffs]
Wed Aug 7 19:27:27 2002 UTC (17 years, 8 months ago) by adcroft
Branch: MAIN
Changes since 1.62: +80 -13 lines
Diff to previous 1.62
o added new option -cpp=... which defines a CPP macro on the cpp command line
o added -fc=...  which specifies the $FC variable
o made the platform target "Linux*" now searches for ifc, g77, pgf77, f77 etc
  in the $PATH and select the appropriate options. This should be done for
  all platforms but I can't remember my passwords on anything except Linux
  boxes....


Revision 1.62 - (view) (download) (annotate) - [select for diffs]
Mon Mar 4 17:26:41 2002 UTC (18 years, 1 month ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint44f_post, checkpoint44g_post, checkpoint44h_post, checkpoint44h_pre, checkpoint45, checkpoint45a_post, checkpoint45b_post, checkpoint45c_post, checkpoint45d_post, checkpoint46, checkpoint46a_post, checkpoint46a_pre, checkpoint46b_post, checkpoint46b_pre
Changes since 1.61: +8 -2 lines
Diff to previous 1.61
Added PTRACERS package

This allows an arbitrary number of passive tracers to be integrated
forward simultaneously with the dynamicaly model.
 + Implemented so far:
    - basic forward algorithm (time-stepping, advection, diffusion, convection)
    - I/O and checkpointing
    - GM/Redi  *but*  using the GM/Redi coefficient of Salt
 + Not implemented so far:
    - KPP
    - OBCS
 + No specific example supplied (yet) but global_ocean.90x40x15 has the
   necessary data.ptracer file. Simply use -enable=ptracers and uncomment
   line in data.pkg. PTRACER01 then reproduces Salt exactly.
 + This package is disabled by default since it increases storage.


Revision 1.61 - (view) (download) (annotate) - [select for diffs]
Fri Feb 15 21:26:37 2002 UTC (18 years, 1 month ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint44e_post, checkpoint44e_pre, checkpoint44f_pre, chkpt44d_post, ecco_c44_e17, ecco_c44_e18, ecco_c44_e19, release1_final_v1
Branch point for: release1_final
Changes since 1.60: +8 -3 lines
Diff to previous 1.60
Added variable MAKEDEPEND.
Is modified for case SunOS, uses ../tools/xmakedepend


Revision 1.60 - (view) (download) (annotate) - [select for diffs]
Mon Feb 11 21:52:31 2002 UTC (18 years, 1 month ago) by heimbach
Branch: MAIN
Changes since 1.59: +4 -4 lines
Diff to previous 1.59
o added tools/xmakedepend to circumvene shortcoming of
  SUN's makedepend (size too small)
o in tools/genmake
  * invoking ../tools/xmakedepend instead of makedepend
  * changed compiler flags for case SunOS


Revision 1.59 - (view) (download) (annotate) - [select for diffs]
Thu Feb 7 20:00:09 2002 UTC (18 years, 2 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint44b_post, chkpt44c_post, chkpt44c_pre
Changes since 1.58: +1 -3 lines
Diff to previous 1.58
o merge of relevant stuff from the ecco-branch:
  - genmake: removed $S64 overwrite for case SunOS
  - pkg/exf: update and corrections for field swapping and obcs
  - pkg/ecco: parameter lists for the_model_main, the_main_loop
              harmonized between ECCO and MITgcm
  - pkg/autodiff: added flow directives for obcs, mdsio_gl_slice
                  updated checkpointing_lev... lists for obcs
  - model/src: minor changes in forward_step, plot_field
               added directive for divided adjoint in the_main_loop
  - pkg/mdsio: added mdsio_gl_slice


Revision 1.58 - (view) (download) (annotate) - [select for diffs]
Mon Nov 26 16:04:00 2001 UTC (18 years, 4 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint43a-release1mods, checkpoint44, checkpoint44b_pre, chkpt44a_post, chkpt44a_pre, release1-branch-end, release1-branch_branchpoint, release1-branch_tutorials
Branch point for: release1-branch
Changes since 1.57: +3 -3 lines
Diff to previous 1.57
Added "flt" to the default DISABLE list.


Revision 1.57 - (view) (download) (annotate) - [select for diffs]
Thu Nov 8 23:40:52 2001 UTC (18 years, 5 months ago) by heimbach
Branch: MAIN
Changes since 1.56: +26 -2 lines
Diff to previous 1.56
Adding TARGET_PWR3 for IBM SP3 platform.


Revision 1.56 - (view) (download) (annotate) - [select for diffs]
Thu Sep 27 19:37:27 2001 UTC (18 years, 6 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint42, checkpoint43, ecco-branch-mod1, release1_b1, release1_beta1
Branch point for: ecco-branch, release1, release1_coupled
Changes since 1.55: +15 -15 lines
Diff to previous 1.55
Broke +pgi mode with last change. Swapped order so that PGI is checked
for before g77.


Revision 1.55 - (view) (download) (annotate) - [select for diffs]
Thu Sep 27 19:06:30 2001 UTC (18 years, 6 months ago) by adcroft
Branch: MAIN
Changes since 1.54: +29 -5 lines
Diff to previous 1.54
Added entry to handle RH on alpha


Revision 1.54 - (view) (download) (annotate) - [select for diffs]
Wed Sep 19 02:43:27 2001 UTC (18 years, 6 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint40, checkpoint41
Changes since 1.53: +4 -2 lines
Diff to previous 1.53
Re-arranged sequence of operations for Adams-Bashforth
 o this does not change numbers
 o this makes it very easy to extract forcing/diffusion out of ABII
   by changing calling sequence in calc_gt, calc_gs,...

Key modifications:
 o new s/r: ADAMS_BASHFORTH2  gT=3/2*gT-1/2*gTnm1
 o changed TIMESTEP_TRACER from gTnm1=t+dt*(3/2*gT-1/2*gTnm1)
   to  gT=T+dt*gT
 o changed CALC_GT,CALC_GS & CALC_GTR1 to calcuate "gT" defined
   by new timestep_tracer (ie. including forcing, ABII, N-L F-S, etc...)
   now calls ADAMS_BASHFORTH2 and FREESURF_RESCALE_G
 o changed CYCLE_TRACER appropriately  T=gT only

Other associated mods:
 o new s/r: FREESURF_RESCALE_G applies non-linear free-surface term
   this used to be in TIMESTEP_TRACER
 o added myIter as argument to CALC_GS,CALC_GT,CALC_GTR1


Revision 1.53 - (view) (download) (annotate) - [select for diffs]
Mon Sep 10 20:54:01 2001 UTC (18 years, 7 months ago) by cnh
Branch: MAIN
CVS Tags: checkpoint40pre9
Changes since 1.52: +2 -2 lines
Diff to previous 1.52
Fix script to be compatible with tcsh on Digital UNIX


Revision 1.52 - (view) (download) (annotate) - [select for diffs]
Mon Sep 10 15:58:26 2001 UTC (18 years, 7 months ago) by cnh
Branch: MAIN
Changes since 1.51: +9 -6 lines
Diff to previous 1.51
Fix compiler options for backwards compatibility with
Sun Workshop 5.0 compilers


Revision 1.51 - (view) (download) (annotate) - [select for diffs]
Mon Sep 10 02:28:20 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.50: +14 -8 lines
Diff to previous 1.50
New compiler options for SunOS:
 o faster
 o actually allows AIM pkg to compile


Revision 1.50 - (view) (download) (annotate) - [select for diffs]
Mon Sep 10 00:25:45 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.49: +2 -2 lines
Diff to previous 1.49
Typo in DEFINES.


Revision 1.49 - (view) (download) (annotate) - [select for diffs]
Wed Sep 5 20:28:26 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.48: +3 -3 lines
Diff to previous 1.48
Fix for SUNs: changed -fast to -dalign in order to avoid adding more and
more routines to NOPTIMFILES. This should be viewed as a temporary fix.


Revision 1.48 - (view) (download) (annotate) - [select for diffs]
Tue Sep 4 17:17:47 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.47: +3 -3 lines
Diff to previous 1.47
Silly thing on SUNs: echo -n Fred echo's "-n Fred". Duh.


Revision 1.47 - (view) (download) (annotate) - [select for diffs]
Thu Aug 23 19:33:44 2001 UTC (18 years, 7 months ago) by heimbach
Branch: MAIN
Changes since 1.46: +4 -4 lines
Diff to previous 1.46
Added files mon_printstats_rl.F mon_printstats_rs.F
to NOOPTFILES list in genmake for SunOS, otherwise compilation
would fail on SunOS 5.8 (e.g. slough.mit.edu).


Revision 1.46 - (view) (download) (annotate) - [select for diffs]
Tue Aug 21 15:54:36 2001 UTC (18 years, 7 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint40pre8
Changes since 1.45: +3 -1 lines
Diff to previous 1.45
The "small_f" target should not be removed from genmake.
It is needed for creating the TAMC source code.


Revision 1.45 - (view) (download) (annotate) - [select for diffs]
Fri Aug 17 16:40:45 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.44: +4 -2 lines
Diff to previous 1.44
Added new target to help testscript deal with the -quick option.


Revision 1.44 - (view) (download) (annotate) - [select for diffs]
Thu Aug 16 17:12:24 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.43: +10 -2 lines
Diff to previous 1.43
Added run-time control of vector-invariant/flux-form momentum eqns.


Revision 1.43 - (view) (download) (annotate) - [select for diffs]
Tue Aug 14 14:33:34 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.42: +2 -2 lines
Diff to previous 1.42
Now remove temporary file hlist.inc which was being left behind.


Revision 1.42 - (view) (download) (annotate) - [select for diffs]
Tue Aug 14 14:27:10 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
Changes since 1.41: +5 -5 lines
Diff to previous 1.41
Fixed problem which infinite links; header files ended up linked to
themselves because the ./ directory was the first in the INCLUDEDIRS
list. Now INCLUDES has -I. in it and ./ is at end of search path.


Revision 1.41 - (view) (download) (annotate) - [select for diffs]
Mon Aug 13 19:34:57 2001 UTC (18 years, 7 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint40pre7
Changes since 1.40: +10 -9 lines
Diff to previous 1.40
Added (uncommented) header links. Header files are now linked just
like other source files.


Revision 1.40 - (view) (download) (annotate) - [select for diffs]
Mon Aug 6 15:11:03 2001 UTC (18 years, 8 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint40pre6
Changes since 1.39: +6 -2 lines
Diff to previous 1.39
Added -ieee flag to genmake (only affect Linux for now) to see if we can
pin-down this rediculous sensitivity of model to small changes in code.
Testscript uses -ieee by default.


Revision 1.39 - (view) (download) (annotate) - [select for diffs]
Tue Jul 31 15:22:12 2001 UTC (18 years, 8 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint40pre5
Changes since 1.38: +8 -7 lines
Diff to previous 1.38
Removed KAP stuff for DEC's since most people don't have it
and we weren't using it anyway.


Revision 1.38 - (view) (download) (annotate) - [select for diffs]
Fri Jul 13 15:16:48 2001 UTC (18 years, 8 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint40pre2, checkpoint40pre3, checkpoint40pre4
Changes since 1.37: +3 -3 lines
Diff to previous 1.37
Added grdchk to default disable list.


Revision 1.37 - (view) (download) (annotate) - [select for diffs]
Tue Jun 5 15:51:18 2001 UTC (18 years, 10 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint40pre1
Changes since 1.36: +3 -3 lines
Diff to previous 1.36
Added ini_cori.F to NOOPTFILES on SUNs. It seems any trig. fns
inside loops get vectorized incorrectly! Definitately a compiler bug.


Revision 1.36 - (view) (download) (annotate) - [select for diffs]
Mon Jun 4 19:47:32 2001 UTC (18 years, 10 months ago) by adcroft
Branch: MAIN
Changes since 1.35: +4 -4 lines
Diff to previous 1.35
Added ini_spherical_polar_grid.F to NOOPTFILES for new SUNs.


Revision 1.35 - (view) (download) (annotate) - [select for diffs]
Tue May 29 14:01:40 2001 UTC (18 years, 10 months ago) by adcroft
Branch: MAIN
Changes since 1.34: +57 -11 lines
Diff to previous 1.34
Merge from branch pre38:
 o essential mods for cubed sphere
 o debugged atmosphere, dynamcis + physics (aim)
 o new packages (mom_vecinv, mom_fluxform, ...)


Revision 1.34 - (view) (download) (annotate) - [select for diffs]
Mon May 14 22:04:44 2001 UTC (18 years, 10 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint39
Changes since 1.33: +2 -2 lines
Diff to previous 1.33
Added the following packages to default disable:
autodiff cal cost ctrl ecco exf.
We might think of adding kpp iand gmredi as well.


Revision 1.33 - (view) (download) (annotate) - [select for diffs]
Tue Mar 6 16:12:45 2001 UTC (19 years, 1 month ago) by jmc
Branch: MAIN
CVS Tags: c37_adj, checkpoint37, checkpoint38
Branch point for: pre38
Changes since 1.32: +2 -2 lines
Diff to previous 1.32
package "timeave" replacing "diags": remove dir "diags" from standard path


Revision 1.32 - (view) (download) (annotate) - [select for diffs]
Mon Mar 5 19:57:31 2001 UTC (19 years, 1 month ago) by adcroft
Branch: MAIN
Changes since 1.31: +8 -2 lines
Diff to previous 1.31
Added   makefile  and  cleanlinks  targets to help automated testing.


Revision 1.31 - (view) (download) (annotate) - [select for diffs]
Wed Feb 28 16:08:51 2001 UTC (19 years, 1 month ago) by adcroft
Branch: MAIN
Changes since 1.30: +2 -2 lines
Diff to previous 1.30
Fixed -disable=all.  I previously added a test to make sure that -disable=pkg
failed if pkg didn't exist.


Revision 1.30 - (view) (download) (annotate) - [select for diffs]
Fri Feb 23 15:52:02 2001 UTC (19 years, 1 month ago) by adcroft
Branch: MAIN
Changes since 1.29: +16 -12 lines
Diff to previous 1.29
Switched order of source code directories (pkg/* now infront of model/src,
eesupp/src and diags/src).
Added catch for diabling non-existent package.


Revision 1.29 - (view) (download) (annotate) - [select for diffs]
Thu Feb 8 18:00:24 2001 UTC (19 years, 2 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint35, checkpoint36
Changes since 1.28: +11 -11 lines
Diff to previous 1.28
Simplified setting of EXEDIR to fix bug in .genmakerc


Revision 1.28 - (view) (download) (annotate) - [select for diffs]
Wed Feb 7 16:49:20 2001 UTC (19 years, 2 months ago) by adcroft
Branch: MAIN
Changes since 1.27: +3 -3 lines
Diff to previous 1.27
Change "make CLEAN" to clean *.meta and *.data files from $EXEDIR
rather than $ROOTDIR/verification/*/input . Safer this way.


Revision 1.27 - (view) (download) (annotate) - [select for diffs]
Wed Feb 7 14:00:06 2001 UTC (19 years, 2 months ago) by adcroft
Branch: MAIN
Changes since 1.26: +2 -1 lines
Diff to previous 1.26
Broke -rootdir=dir when adding auto scan feature.


Revision 1.26 - (view) (download) (annotate) - [select for diffs]
Wed Feb 7 03:37:46 2001 UTC (19 years, 2 months ago) by adcroft
Branch: MAIN
Changes since 1.25: +27 -5 lines
Diff to previous 1.25
Added autoscan feature to set ROOTDIR if not specified.


Revision 1.25 - (view) (download) (annotate) - [select for diffs]
Tue Feb 6 04:22:36 2001 UTC (19 years, 2 months ago) by cnh
Branch: MAIN
Changes since 1.24: +2 -2 lines
Diff to previous 1.24
Changes to make c35 work on DEC.
Refs. to unitialized array elements and compile options.


Revision 1.24 - (view) (download) (annotate) - [select for diffs]
Mon Feb 5 18:46:14 2001 UTC (19 years, 2 months ago) by adcroft
Branch: MAIN
Changes since 1.23: +4 -4 lines
Diff to previous 1.23
Fixed comma separated lists bug.


Revision 1.23 - (view) (download) (annotate) - [select for diffs]
Fri Feb 2 21:36:30 2001 UTC (19 years, 2 months ago) by adcroft
Branch: MAIN
Changes since 1.22: +215 -66 lines
Diff to previous 1.22
Merged changes from branch "branch-atmos-merge" into MAIN (checkpoint34)
 - substantial modifications to algorithm sequence (dynamics.F)
 - packaged OBCS, Shapiro filter, Zonal filter, Atmospheric Physics


Revision 1.22 - (view) (download) (annotate) - [select for diffs]
Thu Nov 30 19:58:13 2000 UTC (19 years, 4 months ago) by adcroft
Branch: MAIN
CVS Tags: branch-atmos-merge-phase1, branch-atmos-merge-phase2, branch-atmos-merge-phase3, branch-atmos-merge-phase4, branch-atmos-merge-phase5, branch-atmos-merge-phase6, branch-atmos-merge-phase7, branch-atmos-merge-shapiro, branch-atmos-merge-start, branch-atmos-merge-zonalfilt, checkpoint33, checkpoint34
Branch point for: branch-atmos-merge
Changes since 1.21: +3 -3 lines
Diff to previous 1.21
Fix so that "make CLEAN" doesn't delete files in natl_box/output


Revision 1.21 - (view) (download) (annotate) - [select for diffs]
Wed Nov 29 22:33:08 2000 UTC (19 years, 4 months ago) by adcroft
Branch: MAIN
Changes since 1.20: +2 -2 lines
Diff to previous 1.20
Added  csrclist.inc  to the remove list after Makefile generation


Revision 1.20 - (view) (download) (annotate) - [select for diffs]
Mon Nov 13 16:40:02 2000 UTC (19 years, 4 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint32
Changes since 1.19: +49 -11 lines
Diff to previous 1.19
Adopted to new routine external_fields_load.F.


Revision 1.19 - (view) (download) (annotate) - [select for diffs]
Tue Sep 12 19:20:35 2000 UTC (19 years, 6 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint31
Changes since 1.18: +28 -26 lines
Diff to previous 1.18
Added target small_f to create source code for TAMC before compiling.


Revision 1.18 - (view) (download) (annotate) - [select for diffs]
Wed Jun 21 20:42:30 2000 UTC (19 years, 9 months ago) by heimbach
Branch: MAIN
CVS Tags: checkpoint30
Changes since 1.17: +25 -1 lines
Diff to previous 1.17
Added cases for Cray T90 (sn7113) and SV1 (sn3002): TARGET_CRAY_VECTOR. (P.H.)


Revision 1.17 - (view) (download) (annotate) - [select for diffs]
Wed Jun 21 19:57:55 2000 UTC (19 years, 9 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint29
Changes since 1.16: +3 -3 lines
Diff to previous 1.16
Added paths to ../pkg/ directory.


Revision 1.16 - (view) (download) (annotate) - [select for diffs]
Fri Mar 24 19:28:46 2000 UTC (20 years ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint26, checkpoint27, checkpoint28
Changes since 1.15: +2 -1 lines
Diff to previous 1.15
Added yet another Hyades only path for the two-proc libraries


Revision 1.15 - (view) (download) (annotate) - [select for diffs]
Fri Mar 24 18:52:53 2000 UTC (20 years ago) by adcroft
Branch: MAIN
Changes since 1.14: +9 -4 lines
Diff to previous 1.14
Set LIBS properly for JAM libaries. (affects Hyades only)


Revision 1.14 - (view) (download) (annotate) - [select for diffs]
Fri Mar 24 18:29:29 2000 UTC (20 years ago) by adcroft
Branch: MAIN
Changes since 1.13: +9 -8 lines
Diff to previous 1.13
Tidied up the options for the Linux platform.


Revision 1.13 - (view) (download) (annotate) - [select for diffs]
Tue Mar 14 20:29:19 2000 UTC (20 years ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint25
Changes since 1.12: +9 -1 lines
Diff to previous 1.12
Minor mods for compiling on T3E.


Revision 1.12 - (view) (download) (annotate) - [select for diffs]
Tue Mar 14 16:21:41 2000 UTC (20 years ago) by adcroft
Branch: MAIN
Changes since 1.11: +46 -1 lines
Diff to previous 1.11
Added "JAM" routines for use with Artic network (Hyades cluster).


Revision 1.11 - (view) (download) (annotate) - [select for diffs]
Fri May 7 18:12:29 1999 UTC (20 years, 11 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint21, checkpoint22, checkpoint23, checkpoint24
Changes since 1.10: +21 -21 lines
Diff to previous 1.10
Set value for WORDLENGTH on all platforms in genmake.


Revision 1.10 - (view) (download) (annotate) - [select for diffs]
Wed May 5 18:32:35 1999 UTC (20 years, 11 months ago) by adcroft
Branch: MAIN
Changes since 1.9: +4 -2 lines
Diff to previous 1.9
Implemented new I/O package (mdsio.F). This package does parallel
I/O in much the same way as dfile.F used to except it uses "direct
access" rather than (f77) unformatted sequential access.

Problems with dfile.F package included:
  o unnecessary memory use (each process had two global sized buffers)
  o inability to read the files it had written without post-processing
  o "tiled" files were tiled by process/thread rather than actual tiles
  o created huge numbers of files with no alternatives

Features of the mdsio.F package:
  o direct-access binary writes
  o no excessive memory use
  o ability to read/write from multiple record files
  o "tiled" files are based on "WRAPPER" tiles so that the number
    and content of files is independent of the number of threads
    and/or processes
  o option to create single "global" files rather than "tiled" files
  o ability to read both "global" and "tiled" files
    [Caveat: the tiling of files must match the model tiles]
  o checkpoints now use a single file per model section
    ie.  one file for the hydrostatic model core, one file
    for the non-hydrostatic extensions and one file for the C-D
    extensions
  o the mid-level I/O routines now is broken into more source files
    read_write_fld.F supplies basic I/O routines with the same interface
                     as the original I/O package
    read_write_rec.F supplies I/O routines which allow multiple records
    write_state.F    writes the model state
    checkpoint.F     supplies the read/write checkpoint routines

All the example input data has had to be modified to be direct-access.
Otherwise only routines that used I/O have been affected and not
all of those have been due to the continuity of arguments in
the read_write_fld.F routines.

What needs to be done?  We have to create a suite of conversion
utilities for users with old-style data. Also supply the option
for using old-style I/O, not just for die-hards but for reading
data too extensive to be converted. And more...


Revision 1.9 - (view) (download) (annotate) - [select for diffs]
Mon Mar 22 16:27:13 1999 UTC (21 years ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint20
Changes since 1.8: +9 -9 lines
Diff to previous 1.8
Changes for linux and command line operation.


Revision 1.8 - (view) (download) (annotate) - [select for diffs]
Tue Dec 8 18:08:51 1998 UTC (21 years, 4 months ago) by adcroft
Branch: MAIN
CVS Tags: checkpoint19
Changes since 1.7: +3 -2 lines
Diff to previous 1.7
Change of rule "Clean". Clean used to remove *.[Fc] but
this might be dangerous. So now it removes only links.


Revision 1.7 - (view) (download) (annotate) - [select for diffs]
Fri Nov 6 22:44:49 1998 UTC (21 years, 5 months ago) by cnh
Branch: MAIN
CVS Tags: checkpoint18
Changes since 1.6: +2 -2 lines
Diff to previous 1.6
Changes to allow for atmospheric integration builds of the code


Revision 1.6 - (view) (download) (annotate) - [select for diffs]
Wed Oct 28 03:11:38 1998 UTC (21 years, 5 months ago) by cnh
Branch: MAIN
CVS Tags: checkpoint16, checkpoint17
Changes since 1.5: +52 -19 lines
Diff to previous 1.5
Changes to support
 - g77 compilation under Linux
 - LR(1) form of 64-bit is D or E for constants
 - Modified adjoint of exch with adjoint variables
   acuumulated.


Revision 1.5 - (view) (download) (annotate) - [select for diffs]
Tue Sep 29 21:22:33 1998 UTC (21 years, 6 months ago) by cnh
Branch: MAIN
CVS Tags: checkpoint15
Changes since 1.4: +14 -7 lines
Diff to previous 1.4
Correction to missing file tim.c and genmake
for checkpoint15


Revision 1.4 - (view) (download) (annotate) - [select for diffs]
Tue Sep 29 18:50:57 1998 UTC (21 years, 6 months ago) by cnh
Branch: MAIN
Changes since 1.3: +2 -1 lines
Diff to previous 1.3
Changes for new exchange routines which do general tile <-> tile
connectivity, variable width overlap regions and provide
hooks for shared memory  and DMA protocols like Arctic, Memory Channel
etc..


Revision 1.3 - (view) (download) (annotate) - [select for diffs]
Thu Jul 16 23:50:44 1998 UTC (21 years, 8 months ago) by cnh
Branch: MAIN
CVS Tags: checkpoint13, checkpoint14
Changes since 1.2: +28 -1 lines
Diff to previous 1.2
Added changes for
  SGI onyx support
  HP Exemplar support
 from Dimitri


Revision 1.2 - (view) (download) (annotate) - [select for diffs]
Wed Jul 15 22:05:44 1998 UTC (21 years, 8 months ago) by adcroft
Branch: MAIN
CVS Tags: branch-point-rdot
Branch point for: branch-rdot
Changes since 1.1: +2 -3 lines
Diff to previous 1.1
We decided to skip the KAP preprocessor stage on the DEC Alpha's
by default. (KAP isn't always available, even on our own well
maintained platforms...)


Revision 1.1 - (view) (download) (annotate) - [select for diffs]
Wed Jul 8 15:24:05 1998 UTC (21 years, 9 months ago) by cnh
Branch: MAIN
CVS Tags: checkpoint12
Tidy up configure (now genmake!) and doc/README for
release of checkpoint12.


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