--- MITgcm/tools/genmake2	2004/02/16 16:24:41	1.65
+++ MITgcm/tools/genmake2	2004/02/24 19:14:18	1.68
@@ -1,6 +1,6 @@
 #! /usr/bin/env bash
 #
-# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.65 2004/02/16 16:24:41 cnh Exp $
+# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.68 2004/02/24 19:14:18 adcroft Exp $
 #
 # Makefile generator for MITgcm UV codes
 #   created  by cnh 03/98
@@ -145,18 +145,27 @@
 	echo "   "$p_FC
 	if test "x$FC" = x ; then
 	    FC=`echo $p_FC | $AWK '{print $1}'`
+	    echo "  Setting FORTRAN compiler to: "$FC
 	fi
     fi
 
-    for i in $p_FC ; do
-	p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
-	if test -r $p_OF ; then
-	    OPTFILE=$p_OF
-	    echo "  The options file:  $p_OF"
-	    echo "    appears to match so we'll use it."
-	    break
-	fi
-    done
+    if test "x$OPTFILE" = x ; then
+	OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
+	if test ! -r $OPTFILE ; then
+             echo "  I looked for the file "$OPTFILE" but did not find it"
+        fi
+    fi
+#    echo "  The options file:  $p_OF"
+#    echo "    appears to match so we'll use it."
+#   for i in $p_FC ; do
+#p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
+#if test -r $p_OF ; then
+#    OPTFILE=$p_OF
+#    echo "  The options file:  $p_OF"
+#    echo "    appears to match so we'll use it."
+#    break
+#fi
+#   done
     if test "x$OPTFILE" = x ; then
 	cat 1>&2 <<EOF
 
@@ -294,6 +303,13 @@
           *only* works if it is supported by the OPTFILE that 
           is being used.
 
+    -mpi | --mpi
+          Include MPI header files and link to MPI libraries
+    -mpi=PATH | --mpi=PATH
+          Include MPI header files and link to MPI libraries using MPI_ROOT
+          set to PATH. i.e. Include files from $PATH/include, link to libraries
+          from $PATH/lib and use binaries from $PATH/bin.
+
   While it is most often a single word, the "NAME" variables specified 
   above can in many cases be a space-delimited string such as:
 
@@ -458,12 +474,29 @@
     if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
 	HAVE_NETCDF=t
     else
-	cat genmake_tnc.log >> genmake_warnings
+	# try again with "-lnetcdf" added to the libs
+	$CPP genmake_tnc.F > genmake_tnc.f  \
+	    &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \
+	    $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1
+	RET_COMPILE=$?
+	test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
+	RETVAL=$?
+	if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
+	    LIBS="$LIBS -lnetcdf"
+	    HAVE_NETCDF=t
+	else
+	    cat genmake_tnc.log >> genmake_warnings
+	fi
     fi
     rm -f genmake_tnc*
 }
 
 
+
+###############################################################################
+#   Sequential part of script starts here
+###############################################################################
+
 #  Set defaults here
 COMMANDL="$0 $@"
 
@@ -474,7 +507,6 @@
 FC=
 CPP=
 LINK=
-# DEFINES="-DWORDLENGTH=4"
 DEFINES=
 PACKAGES=
 ENABLE=
@@ -495,6 +527,8 @@
 KPPFILES=
 NOOPTFILES=
 NOOPTFLAGS=
+MPI=
+MPIPATH=
 
 # DEFINES checked by test compilation
 HAVE_SYSTEM=
@@ -693,6 +727,12 @@
 	    IEEE=true ;;
 	-noieee | --noieee)
 	    IEEE= ;;
+
+	-mpi | --mpi)
+	    MPI=true ;;
+	-mpi=* | --mpi=*)
+	    MPIPATH=$ac_optarg
+	    MPI=true ;;
 	
 #	-jam | --jam)
 #	    JAM=1 ;;
@@ -885,6 +925,10 @@
 fi
 rm -f genmake_test_ln genmake_tlink
 
+if test ! "x$MPI" = x ; then
+      echo "  Turning on MPI cpp macros"
+      DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
+fi
 
 printf "\n===  Checking system libraries  ===\n"
 echo -n "  Do we have the system() command using $FC...  "