--- MITgcm/tools/genmake2 2003/11/11 21:11:06 1.30 +++ MITgcm/tools/genmake2 2004/02/25 19:12:10 1.69 @@ -1,6 +1,6 @@ -#!/bin/bash +#! /usr/bin/env bash # -# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.30 2003/11/11 21:11:06 edhill Exp $ +# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.69 2004/02/25 19:12:10 edhill Exp $ # # Makefile generator for MITgcm UV codes # created by cnh 03/98 @@ -13,30 +13,35 @@ test_for_package_in_cpp_options() { cpp_options=$1 pkg=$2 - grep -i "#define.*ALLOW_$pkg" $cpp_options > /dev/null 2>&1 - RETVAL=$? - if test "x${RETVAL}" = x0 ; then - echo "Error: In $cpp_options there is an illegal line: #define ALLOW_$pkg" - exit 99 - fi - grep -i "#undef.*ALLOW_$pkg" $cpp_options > /dev/null 2>&1 - RETVAL=$? - if test "x${RETVAL}" = x0 ; then - echo "Error: In $cpp_options there is an illegal line: #undef ALLOW_$pkg" - exit 99 - fi - grep -i "#define.*DISABLE_$pkg" $cpp_options > /dev/null 2>&1 + test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99 + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99 + test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99 + test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99 +} + +# Search for particular CPP #cmds associated with MPI +# usage: test_for_mpi_in_cpp_eeoptions CPP_file +test_for_mpi_in_cpp_eeoptions() { + cpp_options=$1 + test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99 + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99 + test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99 + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99 +} + +# Search for particular string in a file. Return 1 if detected, 0 if not +# usage: test_for_string_in_file file string +test_for_string_in_file() { + file=$1 + strng=$2 + grep -i "$strng" $file > /dev/null 2>&1 RETVAL=$? if test "x${RETVAL}" = x0 ; then - echo "Error: In $cpp_options there is an illegal line: #define DISABLE_$pkg" - exit 99 + echo -n "Error: In $file there is an illegal line: " + grep -i "$strng" $file + return 1 fi - grep -i "#undef.*DISABLE_$pkg" $cpp_options > /dev/null 2>&1 - RETVAL=$? - if test "x${RETVAL}" = x0 ; then - echo "Error: In $cpp_options there is an illegal line: #undef DISABLE_$pkg" - exit 99 - fi + return 0 } # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to @@ -73,20 +78,11 @@ tmp1=`uname`"_"`uname -m` tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'` tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'` - PLATFORM=`echo $tmp3 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'` + tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'` + tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'` + PLATFORM=$tmp2 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")` echo " The platform appears to be: $PLATFORM" -# if test "x$OFLIST" = x ; then -# echo " No pre-defined options files were found matching this platform" -# echo " but examples for other platforms can be found in:" -# echo " $ROOTDIR/tools/build_options" -# else -# echo " Options files (located in $ROOTDIR/tools/build_options) that" -# echo " may work with this machine are:" -# for i in $OFLIST ; do -# echo " $i" -# done -# fi echo "test" > test ln -s ./test link @@ -104,6 +100,50 @@ CPP="cpp -traditional -P" fi + # The "original" makedepend is part of the Imake system that is + # most often distributed with XFree86 or with an XFree86 source + # package. As a result, many machines (eg. generic Linux) do not + # have a system-default "makedepend" available. For those + # systems, we have two fall-back options: + # + # 1) a makedepend implementation shipped with the cyrus-imapd + # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/ + # + # 2) a known-buggy xmakedpend shell script + # + # So the choices are, in order: + # + # 1) use the user-specified program + # 2) use a system-wide default + # 3) locally build and use the cyrus implementation + # 4) fall back to the buggy local xmakedpend script + # + if test "x${MAKEDEPEND}" = x ; then + which makedepend >& /dev/null + RETVAL=$? + if test ! "x${RETVAL}" = x0 ; then + echo " a system-default makedepend was not found." + + # Try to build the cyrus impl + rm -f ./genmake_cy_md + ( + cd $ROOTDIR/tools/cyrus-imapd-makedepend \ + && ./configure > /dev/null 2>&1 \ + && make > /dev/null 2>&1 \ + && ./makedepend ifparser.c > /dev/null 2>&1 \ + && echo "true" + ) > ./genmake_cy_md + grep true ./genmake_cy_md > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend' + else + MAKEDEPEND='$(TOOLSDIR)/xmakedepend' + fi + rm -f ./genmake_cy_md + fi + fi + # look for possible fortran compilers tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95" p_FC= @@ -139,18 +179,27 @@ echo " "$p_FC if test "x$FC" = x ; then FC=`echo $p_FC | $AWK '{print $1}'` + echo " Setting FORTRAN compiler to: "$FC fi fi - for i in $p_FC ; do - p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i - if test -r $p_OF ; then - OPTFILE=$p_OF - echo " The options file: $p_OF" - echo " appears to match so we'll use it." - break - fi - done + if test "x$OPTFILE" = x ; then + OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC + if test ! -r $OPTFILE ; then + echo " I looked for the file "$OPTFILE" but did not find it" + fi + fi +# echo " The options file: $p_OF" +# echo " appears to match so we'll use it." +# for i in $p_FC ; do +#p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i +#if test -r $p_OF ; then +# OPTFILE=$p_OF +# echo " The options file: $p_OF" +# echo " appears to match so we'll use it." +# break +#fi +# done if test "x$OPTFILE" = x ; then cat 1>&2 <0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \ > ./.pd_tmp - source ./.pd_tmp + . ./.pd_tmp rm -f ./.pd_tmp echo -n "PNAME = "${} @@ -215,73 +264,276 @@ # Explain usage usage() { - echo - echo "Usage: "$0" [OPTIONS]" - echo " where [OPTIONS] can be:" - echo - echo " -help | --help | -h | --h" - echo " -nooptfile | --nooptfile" - echo " -optfile NAME | --optfile NAME | -of NAME | --of NAME" - echo " -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME" - echo " -pdepend NAME | --pdepend NAME" - echo " -pdepend=NAME | --pdepend=NAME" - echo " -pdefault NAME | --pdefault NAME" - echo " -pdefault=NAME | --pdefault=NAME" - echo " -make NAME | -m NAME" - echo " --make=NAME | -m=NAME" - echo " -makefile NAME | -mf NAME" - echo " --makefile=NAME | -mf=NAME" - echo " -platform NAME | --platform NAME | -pl NAME | --pl NAME" - echo " -platform=NAME | --platform=NAME | -pl=NAME | --pl=NAME" - echo " -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME" - echo " -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME" - echo " -mods NAME | --mods NAME | -mo NAME | --mo NAME" - echo " -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME" - echo " -disable NAME | --disable NAME" - echo " -disable=NAME | --disable=NAME" - echo " -enable NAME | --enable NAME" - echo " -enable=NAME | --enable=NAME" - echo " -standarddirs NAME | --standarddirs NAME" - echo " -standarddirs=NAME | --standarddirs=NAME" - echo " -noopt NAME | --noopt NAME" - echo " -noopt=NAME | --noopt=NAME" -# echo " -cpp NAME | --cpp NAME" -# echo " -cpp=NAME | --cpp=NAME" - echo " -fortran NAME | --fortran NAME | -fc NAME | --fc NAME" - echo " -fc=NAME | --fc=NAME" - echo " -[no]ieee | --[no]ieee" - echo " -[no]mpi | --[no]mpi" - echo " -[no]jam | --[no]jam" - echo - echo " and NAME is a string such as:" - echo - echo " --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'" - echo " -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'" - echo " -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'" - echo - echo " which, depending upon your shell, may need to be single-quoted" - echo " if it contains spaces, dashes, or other special characters." +cat < genmake_test.c <> genmake_warnings 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_errors + +WARNING: C test compile fails +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here +EOF + return 1 + fi + c_tcall=`nm genmake_test.o | grep 'T ' | grep tcall | cut -d ' ' -f 3` + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_warnings + +WARNING: The "nm" command failed. +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here +EOF + return 1 + fi + cat > genmake_tcomp.f <> genmake_warnings 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_warnings + +WARNING: FORTRAN test compile fails -- please see "genmake_errors" +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here. +EOF + return 1 + fi + f_tcall=`nm genmake_tcomp.o | grep 'T ' | grep tcall | cut -d ' ' -f 3` + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_warnings + +WARNING: The "nm" command failed. +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here. +EOF + return 1 + fi + + c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'` + f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'` + c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'` + f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'` + + nmangle="X" + if test "x$c_a" != "x$f_a" ; then + comm="echo x$f_a | sed -e 's|x$c_a||'" + a=`eval $comm` + nmangle="$a ## $nmangle" + fi + if test "x$c_b" != "x$f_b" ; then + comm="echo x$f_b | sed -e 's|x$c_b||'" + b=`eval $comm` + nmangle="$nmangle ## $b" + fi + + FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle" + + # cleanup the testing files + rm -f genmake_tcomp.* genmake_test.* +} + + +check_HAVE_CLOC() { + get_fortran_c_namemangling + cat < genmake_tc_1.c +$FC_NAMEMANGLE +#include +#include +#include +#include +#include +void FC_NAMEMANGLE(cloc) ( double *curtim ) +{ + struct timeval tv1; + gettimeofday(&tv1 , (void *)NULL ); + *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6); + *curtim = *curtim/1.E6; +} +EOF + make genmake_tc_1.o >> genmake_tc.log 2>&1 + RET_C=$? + cat < genmake_tc_2.f + program hello + Real*8 wtime + external cloc + call cloc(wtime) + print *," HELLO WORLD", wtime + end program hello +EOF + $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1 + RET_F=$? + test -x ./genmake_tc && ./genmake_tc >> genmake_tc.log 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + HAVE_CLOC=t + DEFINES="$DEFINES -DHAVE_CLOC" + fi + rm -f genmake_tc* +} + + +check_netcdf_libs() { + cat < genmake_tnc.F + program fgennc +#include "netcdf.inc" + integer iret, ncid, xid + iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid) + IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) + iret = nf_def_dim(ncid, 'X', 11, xid) + IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) + iret = nf_close(ncid) + IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) + end +EOF + $CPP genmake_tnc.F > genmake_tnc.f \ + && $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1 + RET_COMPILE=$? + test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1 + RETVAL=$? + if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then + HAVE_NETCDF=t + else + # try again with "-lnetcdf" added to the libs + $CPP genmake_tnc.F > genmake_tnc.f \ + && $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \ + $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1 + RET_COMPILE=$? + test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1 + RETVAL=$? + if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then + LIBS="$LIBS -lnetcdf" + HAVE_NETCDF=t + else + cat genmake_tnc.log >> genmake_warnings + fi + fi + rm -f genmake_tnc* +} + + + +############################################################################### +# Sequential part of script starts here +############################################################################### # Set defaults here COMMANDL="$0 $@" @@ -291,8 +543,9 @@ S64= KPP= FC= +CPP= LINK= -DEFINES="-DWORDLENGTH=4" +DEFINES= PACKAGES= ENABLE= DISABLE= @@ -312,17 +565,21 @@ KPPFILES= NOOPTFILES= NOOPTFLAGS= +MPI= +MPIPATH= # DEFINES checked by test compilation HAVE_SYSTEM= HAVE_FDATE= FC_NAMEMANGLE= +HAVE_CLOC= +HAVE_NETCDF= MODS= TOOLSDIR= SOURCEDIRS= INCLUDEDIRS= -STANDARDDIRS= +STANDARDDIRS="USE_THE_DEFAULT" PWD=`pwd` MAKE=make @@ -355,8 +612,8 @@ # The following state can be set directly by command-line switches -gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE NOOPT" -gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS" +gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" +gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS" # The following state is not directly set by command-line switches gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM " @@ -373,20 +630,29 @@ gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7" gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12" +cat <&2 @@ -648,9 +917,21 @@ if test "x$LINK" = x ; then LINK=$FC fi +if test "x$MAKE" = x ; then + MAKE="make" +fi if test "x$CPP" = x ; then - CPP="cpp" + CPP=cpp fi +#EH3 === UGLY === +# The following an ugly little hack to check for $CPP in /lib/ and it +# should eventually be replaced with a more general function that +# searches a combo of the user's path and a list of "usual suspects" +# to find the correct location for binaries such as $CPP. +for i in " " "/lib/" ; do + echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP +done +#EH3 === UGLY === echo "#define A a" | $CPP > test_cpp 2>&1 RETVAL=$? if test "x$RETVAL" != x0 ; then @@ -670,7 +951,27 @@ if test "x$MAKEDEPEND" = x ; then MAKEDEPEND=makedepend fi +if test "x$LN" = x ; then + LN="ln -s" +fi +echo "test" > genmake_test_ln +$LN genmake_test_ln genmake_tlink +RETVAL=$? +if test "x$RETVAL" != x0 ; then + cat <&2 + +Error: The command "ln -s" failed -- please specify a working soft-link + command in the optfile. + +EOF + exit 1 +fi +rm -f genmake_test_ln genmake_tlink +if test ! "x$MPI" = x ; then + echo " Turning on MPI cpp macros" + DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" +fi printf "\n=== Checking system libraries ===\n" echo -n " Do we have the system() command using $FC... " @@ -712,46 +1013,22 @@ fi rm -f genmake_tcomp* -echo -n " The name mangling convention for $FC is... " -if test "x$FC_NAMEMANGLE" = x ; then - FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) X ## _" -fi -cat > genmake_tcomp.f < genmake_tcomp.log 2>&1 -RETVAL=$? -if test "x$RETVAL" != x0 ; then - cat genmake_tcomp.log >> genmake_errors - echo - echo "WARNING: test compile fails -- please see \"genmake_errors\"" - echo "WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'" - echo "WARNING: Please contact if you need help here." +echo -n " Can we call simple C routines (here, \"cloc()\") using $FC... " +check_HAVE_CLOC +if test "x$HAVE_CLOC" != x ; then + echo "yes" else - tcall=`nm genmake_tcomp.o | grep tcall | cut -d ' ' -f 3` - RETVAL=$? - if test "x$RETVAL" != x0 ; then - echo - echo "WARNING: The \"nm\" command failed." - echo "WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'" - echo "WARNING: Please contact if you need help here." - else - t0=`echo $tcall | sed -e 's|_tcall|_ ## X|g'` - nmres=`echo $t0 | sed -e 's|tcall_|X ## _|g'` - FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmres" - echo "'$FC_NAMEMANGLE'" - fi + echo "no" fi -echo "$FC_NAMEMANGLE" > FC_NAMEMANGLE.h.template -cmp FC_NAMEMANGLE.h FC_NAMEMANGLE.h.template > /dev/null 2>&1 -RETVAL=$? -if test "x$RETVAL" != x0 ; then - mv -f FC_NAMEMANGLE.h.template FC_NAMEMANGLE.h +rm -f genmake_t* + +echo -n " Can we create NetCDF-enabled binaries... " +check_netcdf_libs +if test "x$HAVE_NETCDF" != x ; then + echo "yes" +else + echo "no" fi -rm -f genmake_tcomp* printf "\n=== Setting defaults ===\n" @@ -792,12 +1069,13 @@ TOOLSDIR="$ROOTDIR/tools" fi if test ! -d ${TOOLSDIR} ; then - echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!" + echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!" exit 1 fi if test "x$S64" = x ; then S64='$(TOOLSDIR)/set64bitConst.sh' fi +THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'` EXECUTABLE=${EXECUTABLE:-mitgcmuv} @@ -806,17 +1084,31 @@ # they appear as regular source code if test -r $ROOTDIR"/eesupp/src/Makefile" ; then echo " Making source files in eesupp from templates" - $MAKE -C $ROOTDIR"/eesupp/src/" > make_eesupp.errors 2>&1 + ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1 RETVAL=$? if test "x${RETVAL}" = x0 ; then rm -f make_eesupp.errors else echo "Error: problem encountered while building source files in eesupp:" - cat make_eesupp.errors + cat make_eesupp.errors 1>&2 exit 1 fi fi +#same for exch2 +if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then + echo " Making source files in exch2 from templates" + ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + rm -f make_exch2.errors + else + echo "Error: problem encountered while building source files in exch2:" + cat make_exch2.errors 1>&2 + exit 1 + fi +fi + printf "\n=== Determining package settings ===\n" if test "x${PDEPEND}" = x ; then tmp=$ROOTDIR"/pkg/pkg_depend" @@ -843,13 +1135,13 @@ echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\"" exit 1 fi -source ./.pd_tmp +. ./.pd_tmp rm -f ./.pd_tmp # Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups" # file should eventually be added so that, for convenience, one can # specify groups of packages using names like "ocean" and "atmosphere". -echo -n " checking default package list: " +echo " checking default package list: " if test "x${PDEFAULT}" = x ; then for i in "." $MODS ; do if test -r $i"/packages.conf" ; then @@ -862,13 +1154,12 @@ PDEFAULT="$ROOTDIR/pkg/pkg_default" fi if test "x${PDEFAULT}" = xNONE ; then - echo "default packages file disabled" + echo " default packages file disabled" else if test ! -r $PDEFAULT ; then - echo "" echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\"" else - echo " using PDEFAULT=\"$PDEFAULT\"" + echo " using PDEFAULT=\"$PDEFAULT\"" # Strip the comments and add all the names def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'` RETVAL=$? @@ -1001,27 +1292,42 @@ fi done +# Build MNC templates and check for ability to build and use NetCDF +echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + rm -f make_mnc.errors + else + echo "Error: problem encountered while building source files in pkg/mnc:" + cat make_mnc.errors 1>&2 + exit 1 + fi + if test "x$HAVE_NETCDF" != xt ; then + cat <$PACKAGES_DOT_H".tmp" -C=== GENMAKE v2 === -C The following defines have been set by GENMAKE, so please do not -C edit anything below these comments. In general, you should -C add or remove packages by re-running genmake with different -C "-enable" and/or "-disable" options. - -#ifndef PACKAGES_H -#define PACKAGES_H +WARNING: the "mnc" package has been enabled but tests failed to + compile and/or execute NetCDF applications. Please check that: -C Packages disabled by genmake: + 1) NetCDF is installed for your compiler and + 2) the LIBS variable (within the 'optfile") specifies the correct + NetCDF library to link against. + EOF + fi +fi + +# Create a list of #define and #undef to enable/disable packages +PACKAGES_DOT_H=PACKAGES_CONFIG.h # The following UGLY HACK sets multiple "#undef"s and it needs to go # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h # file would eventually be split up so that all package-related #define # statements could be separated and handled only by genmake. names=`ls -1 "$ROOTDIR/pkg"` all_pack= +DISABLED_PACKAGES= for n in $names ; do if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then has_pack="f" @@ -1033,95 +1339,83 @@ done if test "x$has_pack" = xf ; then undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'` - echo "#undef $undef" >> $PACKAGES_DOT_H".tmp" + DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef" fi fi done -cat <>$PACKAGES_DOT_H".tmp" - -C Packages enabled by genmake: -EOF +ENABLED_PACKAGES= for i in $PACKAGES ; do def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'` - echo "#define $def" >> $PACKAGES_DOT_H".tmp" + ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def" #eh3 DEFINES="$DEFINES -D$def" #EH3 WARNING : This is an UGLY HACK that needs to be removed!!! case $i in aim_v23) - echo "#define ALLOW_AIM" >> $PACKAGES_DOT_H".tmp" - DEFINES="$DEFINES -DALLOW_AIM" - echo "Warning: ALLOW_AIM is set to enable aim_v23. This is REALLY ugly Jean-Michel :-)" + ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM" + echo "Warning: ALLOW_AIM is set to enable aim_v23." ;; esac #EH3 WARNING : This is an UGLY HACK that needs to be removed!!! done -cat <>$PACKAGES_DOT_H".tmp" - -#endif /* PACKAGES_H */ -EOF - -if test ! -f $PACKAGES_DOT_H ; then - mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H -else - cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H - RETVAL=$? - if test "x$RETVAL" = x0 ; then - rm -f $PACKAGES_DOT_H".tmp" - else - mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak" - mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H - fi -fi echo " Adding STANDARDDIRS" BUILDDIR=${BUILDDIR:-.} -if test "x$STANDARDDIRS" = x ; then +if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then STANDARDDIRS="eesupp model" fi -for d in $STANDARDDIRS ; do - adr="$ROOTDIR/$d/src" - if test ! -d $adr ; then - echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" - echo " is correct and that you correctly specified the STANDARDDIRS option" - exit 1 - else - SOURCEDIRS="$SOURCEDIRS $adr" - fi - adr="$ROOTDIR/$d/inc" - if test ! -d $adr ; then - echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" - echo " is correct and that you correctly specified the STANDARDDIRS option" - exit 1 - else - INCLUDEDIRS="$INCLUDEDIRS $adr" - fi -done +if test "x$STANDARDDIRS" != x ; then + for d in $STANDARDDIRS ; do + adr="$ROOTDIR/$d/src" + if test ! -d $adr ; then + echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" + echo " is correct and that you correctly specified the STANDARDDIRS option" + exit 1 + else + SOURCEDIRS="$SOURCEDIRS $adr" + fi + adr="$ROOTDIR/$d/inc" + if test ! -d $adr ; then + echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" + echo " is correct and that you correctly specified the STANDARDDIRS option" + exit 1 + else + INCLUDEDIRS="$INCLUDEDIRS $adr" + fi + done +fi -echo " Searching for CPP_OPTIONS.h in order to warn about the presence" -echo " of \"#define ALLOW_PKGNAME\"-type statements:" +echo " Searching for *OPTIONS.h files in order to warn about the presence" +echo " of \"#define \"-type statements that are no longer allowed:" CPP_OPTIONS= +CPP_EEOPTIONS= spaths=". $INCLUDEDIRS" +names=`ls -1 "$ROOTDIR/pkg"` for i in $spaths ; do try="$i/CPP_OPTIONS.h" - # echo -n " trying $try : " - if test -f $try -a -r $try ; then + if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then echo " found CPP_OPTIONS=\"$try\"" CPP_OPTIONS="$try" - break + # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h + for n in $names ; do + test_for_package_in_cpp_options $CPP_OPTIONS $n + done + fi + try="$i/CPP_EEOPTIONS.h" + if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then + echo " found CPP_EEOPTIONS=\"$try\"" + # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h +#**** not yet enabled **** +# test_for_mpi_in_cpp_eeoptions $try +#**** not yet enabled **** + CPP_EEOPTIONS="$try" fi done if test "x$CPP_OPTIONS" = x ; then echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths" exit 1 fi -# New safety test: make sure packages are not mentioned in CPP_OPTIONS.h -names=`ls -1 "$ROOTDIR/pkg"` -for n in $names ; do - test_for_package_in_cpp_options $CPP_OPTIONS $n -done - # Here, we build the list of files to be "run through" the adjoint # compiler. @@ -1136,17 +1430,6 @@ done done -cat < adjoint_sed -s/call adopen(/call adopen ( mythid,\\ - \& /g -s/call adclose(/call adclose( mythid,\\ - \& /g -s/call adread(/call adread ( mythid,\\ - \& /g -s/call adwrite(/call adwrite( mythid,\\ - \& /g - -EOF echo echo "=== Creating the Makefile ===" @@ -1177,9 +1460,19 @@ for sf in $sfiles ; do if test ! -r ".links.tmp/$sf" ; then if test -f "$d/$sf" ; then + case $d/$sf in + ./$PACKAGES_DOT_H) + ;; + ./AD_CONFIG.h) + ;; + ./FC_NAMEMANGLE.h) + ;; + *) + touch .links.tmp/$sf + deplist="$deplist $sf" + ;; + esac extn=`echo $sf | $AWK -F '.' '{print $NF}'` - touch .links.tmp/$sf - deplist="$deplist $sf" case $extn in F) echo " \\" >> srclist.inc @@ -1237,6 +1530,8 @@ EXE_SVD=$EXECUTABLE"_svd" cat >>$MAKEFILE <> \$(MAKEFILE) + \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE) -links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) +links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES) small_f: \$(F77FILES) \$(F90FILES) @@ -1350,12 +1652,12 @@ @\$(EXECUTABLE) > \$@ clean: - -cat AD_CONFIG.template > AD_CONFIG.h - -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} + -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template Clean: @make clean @make cleanlinks - -rm -f Makefile.bak genmake_state genmake_*optfile make.log + -rm -f \$(SPECIAL_FILES) + -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak CLEAN: @make Clean -find \$(EXEDIR) -name "*.meta" -exec rm {} \; @@ -1365,10 +1667,21 @@ #eh3 Makefile: makefile makefile: - ${0} $@ + $THIS_SCRIPT $@ cleanlinks: -find . -type l -exec rm {} \; +# Special targets ($SPECIAL_FILES) which are create by make +${PACKAGES_DOT_H}: + @echo Creating \$@ ... + @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@ +AD_CONFIG.h: + @echo Creating \$@ ... + @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@ +FC_NAMEMANGLE.h: + @echo Creating \$@ ... + echo "$FC_NAMEMANGLE" > \$@ + # The normal chain of rules is ( .F - .f - .o ) .F.f: \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ @@ -1428,21 +1741,27 @@ adtamc: ad_tamc_output.f ad_input_code.f: \$(AD_FILES) \$(HEADERFILES) + @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h + -rm -f ad_config.template @make \$(F77FILES) @make \$(AD_FLOW_FILES) cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f ad_taf_output.f: ad_input_code.f \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f - cat ad_input_code_ad.f | sed -f adjoint_sed > ad_taf_output.f + cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f + +adtafonly: + \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f + cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f ad_taf: ad_taf_output.o \$(OBJFILES) \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS) ad_tamc_output.f: ad_input_code.f \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f - cat ad_input_code_ad.f | sed -f adjoint_sed > ad_tamc_output.f + cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f ad_tamc: ad_tamc_output.o \$(OBJFILES) \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) @@ -1454,42 +1773,38 @@ ftltamc: ftl_tamc_output.f ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES) + @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h + -rm -f ftl_config.template @make \$(F77FILES) @make \$(AD_FLOW_FILES) cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f ftl_taf_output.f: ftl_input_code.f \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f - cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_taf_output.f + cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f + +ftltafonly: + \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f + cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f ftl_taf: ftl_taf_output.o \$(OBJFILES) \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS) ftl_tamc_output.f: ftl_input_code.f \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f - cat ftl_input_code_ftl.f | sed -f adjoint_sed > ftl_tamc_output.f + cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f ftl_tamc: ftl_tamc_output.o \$(OBJFILES) \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS) # ... SVD ... -svd: svd_taf -svd_taf_f: svd_taf_output.f - -svd_input_code.f: \$(SRCFILES) - cmp svd_config.template AD_CONFIG.h || cat svd_config.template > AD_CONFIG.h - @make \$(F77FILES) - @make \$(AD_FLOW_FILES) - cat \$(AD_FLOW_FILES) \$(AD_FILES) > svd_input_code.f +svdtaf: ad_taf_output.f ftl_taf_output.f +svdall: svd_taf -svd_taf_output.f: svd_input_code.f - \$(TAF) \$(SVD_TAF_FLAGS) \$(TAF_EXTRA) svd_input_code.f - cat svd_input_code_ad.f | sed -f adjoint_sed > svd_taf_output.f - -svd_taf: svd_taf_output.o \$(OBJFILES) - \$(LINK) -o ${EXE_SVD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) svd_taf_output.o \$(LIBS) +svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES) + \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS) #========================================= @@ -1530,44 +1845,23 @@ printf "\n=== Done ===\n" -# Write the "template" files for the adjoint builds -cat >AD_CONFIG.template <ad_config.template <ftl_config.template <svd_config.template < $PACKAGES_DOT_H".tmp" +if test ! -f $PACKAGES_DOT_H ; then + mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H +else + cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + rm -f $PACKAGES_DOT_H".tmp" + else + mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak" + mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H + fi +fi +if test ! -f AD_CONFIG.h ; then + $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h +fi # Write the "state" for future records