--- MITgcm/tools/genmake2 2003/08/22 04:07:00 1.2 +++ MITgcm/tools/genmake2 2006/08/12 03:47:36 1.154 @@ -1,6 +1,6 @@ -#!/bin/bash +#! /usr/bin/env bash # -# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.2 2003/08/22 04:07:00 edhill Exp $ +# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.154 2006/08/12 03:47:36 edhill Exp $ # # Makefile generator for MITgcm UV codes # created by cnh 03/98 @@ -8,189 +8,470 @@ # modified by aja 01/00 # rewritten in bash by eh3 08/03 +# Search for particular CPP #cmds associated with packages +# usage: test_for_package_in_cpp_options CPP_file package_name +test_for_package_in_cpp_options() { + cpp_options=$1 + pkg=$2 + test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]" + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]" + test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]" + test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]" + test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$" + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$" + test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$" + test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$" +} + +# Search for particular CPP #cmds associated with MPI +# usage: test_for_mpi_in_cpp_eeoptions CPP_file +test_for_mpi_in_cpp_eeoptions() { + cpp_options=$1 + test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]" + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]" + test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]" + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]" + test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$" + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$" + test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$" + test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$" +} + +# Search for particular string in a file. Return 1 if detected, 0 if not +# usage: test_for_string_in_file file string +test_for_string_in_file() { + file=$1 + strng=$2 + grep -i "$strng" $file > /dev/null 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + printf "Error: In $file there is an illegal line: " + grep -i "$strng" $file + exit 99 + fi + return 0 +} + +# Read the $ROOTDIR/pkg/pkg_groups file and expand any references to +# the package list. +expand_pkg_groups() { + new_packages= + PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups" + if test -r $PKG_GROUPS ; then + cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp + cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp + matched=0 + for i in $PACKAGES ; do + line=`grep "^ *$i" ./p2.tmp` + RETVAL=$? + if test "x$RETVAL" = x0 ; then + matched=1 + replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'` + echo " replacing \"$i\" with: $replace" + new_packages="$new_packages $replace" + else + new_packages="$new_packages $i" + fi + done + PACKAGES=$new_packages + rm -f ./p[1,2].tmp + return $matched + else + echo "Warning: can't read package groups definition file: $PKG_GROUPS" + fi +} + +# Check for broken environments (eg. cygwin, MacOSX w/HFS+) that +# cannot distinguish [*.F/*.F90] from [*.f/*.f90] files. +check_for_broken_Ff() { + # Do we have defaults for $FS and/or $FS90 ? + tfs=f + tfs9=f90 + if test "x$FS" != x ; then + tfs="$FS" + fi + if test "x$FS90" != x ; then + tfs9="$FS90" + fi + + # First check the ability to create a *.F/.f pair. + cat <> genmake_hello.F + program hello + write(*,*) 'hi' + stop + end +EOF + cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 ; then + if test "x$FS" = x ; then + FS='for' + FS90='fr9' + check_for_broken_Ff + else + cat <&1 +ERROR: Your file system cannot distinguish between *.F and *.f files + (fails the "cp" test) and this program cannot find a suitable + replacement extension. Please try a different build environment or + contact the list for help. + +EOF + exit -1 + fi + return + fi + rm -f genmake_hello.* + + # Check the ability of ${MAKE} and ${LN} to use the current set + # of extensions. + cat <> genmake_hello.F + program hello + write(*,*) 'hi' + stop + end +EOF + test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst" + cat <> $MAKEFILE +.SUFFIXES: +.SUFFIXES: .$tfs .F +.F.$tfs: + $LN \$< \$@ +EOF + $MAKE "genmake_hello."$tfs > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then + if test "x$FS" = x ; then + FS='for' + FS90='fr9' + check_for_broken_Ff + else + cat <&1 +ERROR: Your file system cannot distinguish between *.F and *.f files + (fails the "make/ln" test) and this program cannot find a suitable + replacement extension. Please try a different build environment or + contact the list for help. + +EOF + exit -1 + return + fi + fi + rm -f genmake_hello.* $MAKEFILE + test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE + + # If we make it here, use the extensions + FS=$tfs + FS90=$tfs9 + return +} + + +look_for_makedepend() { + + # The "original" makedepend is part of the Imake system that is + # most often distributed with XFree86 or with an XFree86 source + # package. As a result, many machines (eg. generic Linux) do not + # have a system-default "makedepend" available. For those + # systems, we have two fall-back options: + # + # 1) a makedepend implementation shipped with the cyrus-imapd + # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/ + # + # 2) a known-buggy xmakedpend shell script + # + # So the choices are, in order: + # + # 1) use the user-specified program + # 2) use a system-wide default + # 3) locally build and use the cyrus implementation + # 4) fall back to the buggy local xmakedpend script + # + if test "x${MAKEDEPEND}" = x ; then + which makedepend > /dev/null 2>&1 + RV0=$? + test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst" + # echo 'MAKEFILE="'$MAKEFILE'"' + cat <> $MAKEFILE +# THIS IS A TEST MAKEFILE GENERATED BY "genmake2" +# +# Some "makedepend" implementations will die if they cannot +# find a Makefile -- so this file is here to gives them an +# empty one to find and parse. +EOF + cat <> genmake_tc.f + program test + write(*,*) 'test' + stop + end +EOF + makedepend genmake_tc.f > /dev/null 2>&1 + RV1=$? + test -f $MAKEFILE && rm -f $MAKEFILE + test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE + if test "x${RV0}${RV1}" = x00 ; then + MAKEDEPEND=makedepend + else + echo " a system-default makedepend was not found." + + # Try to build the cyrus implementation + build_cyrus_makedepend + RETVAL=$? + if test "x$RETVAL" != x0 ; then + MAKEDEPEND='$(TOOLSDIR)/xmakedepend' + fi + rm -f ./genmake_cy_md + fi + else + # echo "MAKEDEPEND=${MAKEDEPEND}" + echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1 + RETVAL=$? + if test x"$RETVAL" = x0 ; then + build_cyrus_makedepend + fi + fi +} + + +build_cyrus_makedepend() { + rm -f ./genmake_cy_md + ( + cd $ROOTDIR/tools/cyrus-imapd-makedepend \ + && ./configure > /dev/null 2>&1 \ + && make > /dev/null 2>&1 + if test -x ./makedepend.exe ; then + $LN ./makedepend.exe ./makedepend + fi + ./makedepend ifparser.c > /dev/null 2>&1 \ + && echo "true" + ) > ./genmake_cy_md + grep true ./genmake_cy_md > /dev/null 2>&1 + RETVAL=$? + rm -f ./genmake_cy_md + if test "x$RETVAL" = x0 ; then + MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend' + return 0 + else + echo "WARNING: unable to build cyrus-imapd-makedepend" + return 1 + fi +} + + +build_embed_encode() +{ + printf " building the embed-encode utility... " + if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then + if test ! -d "$ROOTDIR/tools/embed_encode" ; then + echo + echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\"" + echo + EMBED_SRC=f + return 1 + fi + clist="cc gcc c89 $CC" + for ic in $clist ; do + comm="$ic -o encode_files encode_files.c" + ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + echo "OK" + DEFINES="$DEFINES -DHAVE_EMBED_SRC" + return 0 + fi + done + echo + echo " Error: unable to build $ROOTDIR/embed_encode/encode_files" + echo " so it has been disabled" + echo + EMBED_SRC=f + return 1 + fi + echo "OK" + DEFINES="$DEFINES -DHAVE_EMBED_SRC" +} + # Guess possible config options for this host find_possible_configs() { - p_PLATFORM=`uname`"-"`uname -m` - echo "The platform appears to be:" - echo " "$p_PLATFORM - - p_LN= + tmp1=`uname`"_"`uname -m` + tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'` + tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'` + tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'` + tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'` + tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'` + PLATFORM=$tmp3 + echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32 + OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")` + echo " The platform appears to be: $PLATFORM" + echo "test" > test ln -s ./test link RETVAL=$? if test "x${RETVAL}" = x0 ; then - p_LN="ln -s" + LN="ln -s" + else + echo "Error: \"ln -s\" does not appear to work on this system!" + echo " For help, please contact ." + exit 1 fi rm -f test link - p_CPP=`which cpp` - - RETVAL=$? - if test "x${RETVAL}" = x0 ; then - p_LN="ln -s" + if test "x$CPP" = x ; then + CPP="cpp -traditional -P" fi - rm -f test link - # look for possible fortran compilers - p_FC= - for c in f77 g77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 ; do - which $c > /dev/null 2>&1 + look_for_makedepend + + #================================================================ + # look for possible C compilers + tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc" + p_CC= + for c in $tmp ; do + rm -f ./genmake_hello.c ./genmake_hello + cat >> genmake_hello.c << EOF +#include +int main(int argc, char **argv) { + printf("Hello!\n"); + return 0; +} +EOF + $c -o genmake_hello genmake_hello.c > /dev/null 2>&1 RETVAL=$? if test "x${RETVAL}" = x0 ; then - p_FC="$p_FC $c" + p_CC="$p_CC $c" fi done - echo "Possible FORTRAN compilers appear to be: " - if test "x${p_FC}" = x ; then - echo " None found!!!" + rm -f ./genmake_hello.c ./genmake_hello + if test "x${p_CC}" = x ; then + cat 1>&2 </dev/null` - RETVAL=$? - if test "x${RETVAL}" = x0 ; then - cat >>test.f <> hello.f < out" + $c -o hello hello.f > /dev/null 2>&1 RETVAL=$? if test "x${RETVAL}" = x0 ; then - a=`cat out` - for i in $a ; do - case $i in - -*) - mpi_libs="$mpi_libs $i" ;; - esac - done - echo "The MPI libs appear to be:" - echo " "$mpi_libs + p_FC="$p_FC $c" fi - rm -f test.f out + done + rm -f ./hello.f ./hello + if test "x${p_FC}" = x ; then + cat 1>&2 <&2 <. + +EOF + exit 1 + fi + +# # look for possible MPI libraries +# mpi_libs= +# mpi_fort=`which mpif77 2>/dev/null` +# RETVAL=$? +# if test "x${RETVAL}" = x0 ; then +# cat >>test.f < out" +# RETVAL=$? +# if test "x${RETVAL}" = x0 ; then +# a=`cat out` +# for i in $a ; do +# case $i in +# -*) +# mpi_libs="$mpi_libs $i" ;; +# esac +# done +# echo "The MPI libs appear to be:" +# echo " "$mpi_libs +# fi +# rm -f test.f out +# fi - # echo "ac_option = :$ac_option:" - - # If the previous option needs an argument, assign it. - if test -n "$ac_prev"; then - eval "$ac_prev=\$ac_option" - ac_prev= - continue - fi - - ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'` - - case $ac_option in - - -help | --help | -h | --h) - usage ;; - - -nooptfile | --nooptfile) - OPTFILE="NONE" ;; - -optfile | --optfile | -of | --of) - ac_prev=optfile ;; - -optfile=* | --optfile=* | -of=* | --of=*) - OPTFILE=$ac_optarg ;; - - -pdepend | --pdepend) - ac_prev=pdepend ;; - -pdepend=* | --pdepend=*) - PDEPEND=$ac_optarg ;; - - -pdefault | --pdefault) - ac_prev=pdefault ;; - -pdefault=* | --pdefault=*) - PDEFAULT=$ac_optarg ;; - - -makefile | -ma) - ac_prev=makefile ;; - --makefile=* | -ma=*) - MAKEFILE=$ac_optarg ;; - - -platform | --platform | -pl | --pl) - ac_prev=platform ;; - -platform=* | --platform=* | -pl=* | --pl=*) - PLATFORM=$ac_optarg ;; - - -rootdir | --rootdir | -rd | --rd) - ac_prev=rootdir ;; - -rootdir=* | --rootdir=* | -rd=* | --rd=*) - ROOTDIR=$ac_optarg ;; - - -mods | --mods | -mo | --mo) - ac_prev=mods ;; - -mods=* | --mods=* | -mo=* | --mo=*) - MODS=$ac_optarg ;; - - -disable | --disable) - ac_prev=disable ;; - -disable=* | --disable=*) - DISABLE=$ac_optarg ;; - - -enable | --enable) - ac_prev=enable ;; - -enable=* | --enable=*) - ENABLE=$ac_optarg ;; - - -noopt | --noopt) - ac_prev=noopt ;; - -noopt=* | --noopt=*) - NOOPT=$ac_optarg ;; - -# -cpp | --cpp) -# ac_prev=cpp ;; -# -cpp=* | --cpp=*) -# CPP=$ac_optarg ;; - - -fortran | --fortran | -fc | --fc) - ac_prev=fc ;; - -fc=* | --fc=*) - FC=$ac_optarg ;; - - -ieee | --ieee) - IEEE=1 ;; - -noieee | --noieee) - IEEE=0 ;; - - -mpi | --mpi) - MPI=1 ;; - -nompi | --nompi) - MPI=0 ;; - - -jam | --jam) - JAM=1 ;; - -nojam | --nojam) - JAM=0 ;; - - -*) - echo "Error: unrecognized option: "$ac_option - usage - ;; - - *) - echo "Error: unrecognized argument: "$ac_option - usage - ;; - - esac - - done } # Parse the package dependency information @@ -199,146 +480,667 @@ # strip the comments and then convert the dependency file into # two arrays: PNAME, DNAME cat $1 | sed -e 's/#.*$//g' \ - | awk 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \ + | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \ > ./.pd_tmp - source ./.pd_tmp + . ./.pd_tmp rm -f ./.pd_tmp - echo -n "PNAME = "${} + printf "PNAME = "${} } # Explain usage usage() { - echo - echo "Usage: "$0" [OPTIONS]" - echo " where [OPTIONS] can be:" - echo - echo " -help | --help | -h | --h" - echo " -nooptfile | --nooptfile" - echo " -optfile NAME | --optfile NAME | -of NAME | --of NAME" - echo " -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME" - echo " -pdepend NAME | --pdepend NAME" - echo " -pdepend=NAME | --pdepend=NAME" - echo " -pdefault NAME | --pdefault NAME" - echo " -pdefault=NAME | --pdefault=NAME" - echo " -makefile NAME | -ma NAME" - echo " --makefile=NAME | -ma=NAME" - echo " -platform NAME | --platform NAME | -pl NAME | --pl NAME" - echo " -platform=NAME | --platform=NAME | -pl=NAME | --pl=NAME" - echo " -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME" - echo " -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME" - echo " -mods NAME | --mods NAME | -mo NAME | --mo NAME" - echo " -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME" - echo " -disable NAME | --disable NAME" - echo " -disable=NAME | --disable=NAME" - echo " -enable NAME | --enable NAME" - echo " -enable=NAME | --enable=NAME" - echo " -noopt NAME | --noopt NAME" - echo " -noopt=NAME | --noopt=NAME" -# echo " -cpp NAME | --cpp NAME" -# echo " -cpp=NAME | --cpp=NAME" - echo " -fortran NAME | --fortran NAME | -fc NAME | --fc NAME" - echo " -fc=NAME | --fc=NAME" - echo " -[no]ieee | --[no]ieee" - echo " -[no]mpi | --[no]mpi" - echo " -[no]jam | --[no]jam" - echo - echo " and NAME is a string such as:" - echo - echo " --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'" - echo " -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'" - echo " -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'" - echo - echo " which, depending upon your shell, may need to be single-quoted" - echo " if it contains spaces, dashes, or other special characters." +cat < $fname +# Build a CPP macro to automate calling C routines from FORTRAN +get_fortran_c_namemangling() { + + #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\"" + if test ! "x$FC_NAMEMANGLE" = x ; then + return 0 + fi + + default_nm="#define FC_NAMEMANGLE(X) X ## _" + + cat > genmake_test.c <> genmake_warnings 2>&1 RETVAL=$? - if test "x${RETVAL}" = x ; then - echo "Error: cannot write to $fname" - exit 1 + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_errors + +WARNING: C test compile fails +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here +EOF + return 1 + fi + c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3` + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_warnings + +WARNING: The "nm" command failed. +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here +EOF + return 1 fi - echo "makefile "$makefile > $fname + cat > genmake_tcomp.$FS <> genmake_warnings 2>&1 + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_warnings + +WARNING: FORTRAN test compile fails -- please see "genmake_errors" +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here. +EOF + return 1 + fi + f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3` + RETVAL=$? + if test "x$RETVAL" != x0 ; then + FC_NAMEMANGLE=$default_nm + cat <> genmake_warnings + +WARNING: The "nm" command failed. +WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE' +WARNING: Please contact if you need help here. +EOF + return 1 + fi + + c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'` + f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'` + c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'` + f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'` + + nmangle="X" + if test "x$c_a" != "x$f_a" ; then + comm="echo x$f_a | sed -e 's|x$c_a||'" + a=`eval $comm` + nmangle="$a ## $nmangle" + fi + if test "x$c_b" != "x$f_b" ; then + comm="echo x$f_b | sed -e 's|x$c_b||'" + b=`eval $comm` + nmangle="$nmangle ## $b" + fi + + FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle" + + # cleanup the testing files + rm -f genmake_tcomp.* genmake_test.* +} + + +check_HAVE_CLOC() { + get_fortran_c_namemangling + cat < genmake_tc_1.c +$FC_NAMEMANGLE +#include +#include +#include +#include +#include +void FC_NAMEMANGLE(cloc) ( double *curtim ) +{ + struct timeval tv1; + gettimeofday(&tv1 , (void *)NULL ); + *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6); + *curtim = *curtim/1.E6; +} +EOF + make genmake_tc_1.o >> genmake_warnings 2>&1 + RET_C=$? + cat < genmake_tc_2.$FS + program hello + REAL*8 wtime + external cloc + call cloc(wtime) + print *," HELLO WORLD", wtime + end +EOF + $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1 + RET_F=$? + test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + HAVE_CLOC=t + DEFINES="$DEFINES -DHAVE_CLOC" + fi + rm -f genmake_tc* +} + + +check_HAVE_SIGREG() { + if test ! "x$HAVE_SIGREG" = x ; then + return + fi + get_fortran_c_namemangling + cat < genmake_tc_1.c +$FC_NAMEMANGLE +#include +#include +#include +#include +#include + +int * ip; + +static void killhandler( + unsigned int sn, siginfo_t si, struct ucontext *sc ) +{ + *ip = *ip + 1; + return; +} + +void FC_NAMEMANGLE(sigreg) (int * aip) +{ + struct sigaction s; + ip = aip; + s.sa_flags = SA_SIGINFO; + s.sa_sigaction = (void *)killhandler; + if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) { + printf("Sigaction returned error = %d\n", errno); + exit(0); + } + return; +} +EOF + make genmake_tc_1.o >> genmake_warnings 2>&1 + RET_C=$? + cat < genmake_tc_2.$FS + program hello + integer anint + common /iv/ anint + external sigreg + call sigreg(anint) + end +EOF + echo >> genmake_warnings + echo "running: check_HAVE_SIGREG()" >> genmake_warnings + cat genmake_tc_2.$FS >> genmake_warnings + COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" + echo $COMM >> genmake_warnings + $COMM >> genmake_warnings 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + HAVE_SIGREG=t + DEFINES="$DEFINES -DHAVE_SIGREG" + fi + rm -f genmake_tc* +} + + +check_HAVE_SETRLSTK() { + if test "x$HAVE_SETRLSTK" = xt ; then + DEFINES="$DEFINES -DHAVE_SETRLSTK" + return + fi + if test ! "x$HAVE_SETRLSTK" = x ; then + return + fi + get_fortran_c_namemangling + cat < genmake_tc_1.c +$FC_NAMEMANGLE +#include +#include +#include +void FC_NAMEMANGLE(setrlstk) () +{ + struct rlimit rls; + rls.rlim_cur = RLIM_INFINITY; + rls.rlim_max = RLIM_INFINITY; + setrlimit(RLIMIT_STACK, &rls); + return; +} +EOF + make genmake_tc_1.o >> genmake_warnings 2>&1 + RET_C=$? + cat < genmake_tc_2.$FS + program hello + external setrlstk + call setrlstk() + end +EOF + echo >> genmake_warnings + echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings + cat genmake_tc_2.$FS >> genmake_warnings + COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" + echo $COMM >> genmake_warnings + $COMM >> genmake_warnings 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + HAVE_SETRLSTK=t + DEFINES="$DEFINES -DHAVE_SETRLSTK" + fi + rm -f genmake_tc* +} + + +check_HAVE_STAT() { + get_fortran_c_namemangling + cat < genmake_tc_1.c +$FC_NAMEMANGLE +#include +#include +#include +#include +#include +void FC_NAMEMANGLE(tfsize) ( int *nbyte ) +{ + char name[512]; + struct stat astat; + + name[0] = 'a'; name[1] = '\0'; + if (! stat(name, &astat)) + *nbyte = (int)(astat.st_size); + else + *nbyte = -1; +} +EOF + make genmake_tc_1.o >> genmake_tc.log 2>&1 + RET_C=$? + cat < genmake_tc_2.$FS + program hello + integer nbyte + call tfsize(nbyte) + print *," HELLO WORLD", nbyte + end +EOF + echo >> genmake_warnings + echo "running: check_HAVE_STAT()" >> genmake_warnings + cat genmake_tc_2.$FS >> genmake_warnings + COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o" + echo $COMM >> genmake_warnings + $COMM >> genmake_tc.log 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + HAVE_STAT=t + DEFINES="$DEFINES -DHAVE_STAT" + fi + rm -f genmake_tc* +} + + +check_netcdf_libs() { + if test ! "x$SKIP_NETCDF_CHECK" = x ; then + return + fi + echo >> genmake_warnings + echo "running: check_netcdf_libs()" >> genmake_warnings + cat < genmake_tnc.F + program fgennc +#include "netcdf.inc" +EOF + if test ! "x$MPI" = x ; then + echo '#include "mpif.h"' >> genmake_tnc.F + fi + cat <> genmake_tnc.F + integer iret, ncid, xid + iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid) + IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) + iret = nf_def_dim(ncid, 'X', 11, xid) + IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) + iret = nf_close(ncid) + IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret) + end +EOF + echo "=== genmake_tnc.F ===" > genmake_tnc.log + cat genmake_tnc.F >> genmake_tnc.log + echo "=== genmake_tnc.F ===" >> genmake_tnc.log + RET_CPP=f + COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES" + echo "$COMM" >> genmake_tnc.log + $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t + if test "x$RET_CPP" = xf ; then + echo " WARNING: CPP failed to pre-process the netcdf test." \ + >> genmake_tnc.log + echo " Please check that \$INCLUDES is properly set." \ + >> genmake_tnc.log + fi + echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log + echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log + $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ + && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1 + RET_COMPILE=$? + cat genmake_tnc.log >> genmake_warnings + + #EH3 Remove test program execution for machines that either disallow + #EH3 execution or cannot support it (eg. cross-compilers) + #EH3 + #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1 + #EH3 RETVAL=$? + #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then + + if test "x$RET_COMPILE" = x0 ; then + HAVE_NETCDF=t + else + # try again with "-lnetcdf" added to the libs + echo "try again with added '-lnetcdf'" > genmake_tnc.log + echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log + echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log + echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log + cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \ + && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \ + && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1 + RET_COMPILE=$? + cat genmake_tnc.log >> genmake_warnings + if test "x$RET_COMPILE" = x0 ; then + LIBS="$LIBS -lnetcdf" + HAVE_NETCDF=t + fi + fi + rm -f genmake_tnc* } -#eh3 # This is the generic configuration. -#eh3 set LN = ( 'ln -s' ) -#eh3 set CPP = ( '/lib/cpp -P' ) -#eh3 set S64 = ( '$(TOOLSDIR)/set64bitConst.sh' ) -#eh3 set KPP = ( ) -#eh3 set FC = ( 'f77' ) -#eh3 set LINK = $FC -#eh3 set MAKEDEPEND = ( 'makedepend' ) -#eh3 set INCLUDES = ( -I. ) -#eh3 set FFLAGS = ( ) -#eh3 set FOPTIM = ( ) -#eh3 set CFLAGS = ( ) -#eh3 set KFLAGS1 = ( ) -#eh3 set KFLAGS2 = ( ) -#eh3 set LIBS = ( ) -#eh3 set KPPFILES = ( ) -#eh3 if (! $?NOOPTFILES ) set NOOPTFILES = ( ) -#eh3 if (! $?NOOPTFLAGS ) set NOOPTFLAGS = ( ) + +############################################################################### +# Sequential part of script starts here +############################################################################### # Set defaults here +COMMANDL="$0 $@" + PLATFORM= LN= S64= KPP= -FC= +#FC= +#CC=gcc +#CPP= LINK= +DEFINES= PACKAGES= ENABLE= DISABLE= -MAKEFILE= -MAKEDEPEND= +# MAKEFILE= +# MAKEDEPEND= PDEPEND= +DUMPSTATE=t PDEFAULT= OPTFILE= -INCLUDES="-I." +INCLUDES="-I. $INCLUDES" FFLAGS= FOPTIM= CFLAGS= KFLAGS1= KFLAGS2= +#LDADD= LIBS= KPPFILES= NOOPTFILES= NOOPTFLAGS= +MPI= +MPIPATH= +TS= +PAPIS= +PCLS= +FOOLAD= +PAPI= +PCL= +HPMT= +GSL= +HAVE_TEST_L= + +# DEFINES checked by test compilation or command-line +HAVE_SYSTEM= +HAVE_FDATE= +FC_NAMEMANGLE= +HAVE_CLOC= +# HAVE_SETRLSTK= +HAVE_STAT= +HAVE_NETCDF= +HAVE_ETIME= +IGNORE_TIME= MODS= TOOLSDIR= SOURCEDIRS= INCLUDEDIRS= +STANDARDDIRS="USE_THE_DEFAULT" +G2ARGS= +BASH= PWD=`pwd` -MAKE=make -THISHOSTNAME=`hostname` +test "x$MAKE" = x && MAKE=make +test "x$AWK" = x && AWK=awk +EMBED_SRC= +THISHOST=`hostname` THISCWD=`pwd` THISDATE=`date` +THISUSER=`echo $USER` +THISVER= MACHINE=`uname -a` +EXECUTABLE= +EXEHOOK= +EXEDIR= +PACKAGES_CONF= +IEEE= +if test "x$MITGCM_IEEE" != x ; then + IEEE=$MITGCM_IEEE +fi +FS= +FS90= + +AUTODIFF_PKG_USED=f +AD_OPTFILE= +TAF= +AD_TAF_FLAGS= +FTL_TAF_FLAGS= +SVD_TAF_FLAGS= +TAF_EXTRA= +TAMC= +AD_TAMC_FLAGS= +FTL_TAF_FLAGS= +SVD_TAMC_FLAGS= +TAMC_EXTRA= + + +# The following state can be set directly by command-line switches +gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE" +gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS" + +# The following state is not directly set by command-line switches +gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM " +gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS" +gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE" +gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF" +gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME" + +# The following are all related to adjoint/tangent-linear stuff +gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS" +gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS" +gm_s12="TAF_EXTRA TAMC_EXTRA" + +gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7" +gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12" + +cat <&2 + +Error: no Fortran compiler: please specify using one of the following: + 1) within the options file ("FC=...") as specified by "-of=OPTFILE" + 2) the "-fc=XXX" command-line option + 3) the "./genmake_local" file +EOF + exit 1 +fi +if test "x$CC" = x ; then + CC=cc +# cat <&2 +# Error: no C compiler: please specify using one of the following: +# 1) within the options file ("CC=...") as specified by "-of=OPTFILE" +# 2) the "-cc=XXX" command-line option +# 3) the "./genmake_local" file +# EOF +# exit 1 +fi +if test "x$LINK" = x ; then + LINK=$FC +fi +if test "x$MAKE" = x ; then + MAKE="make" +fi +if test "x$CPP" = x ; then + CPP=cpp +fi +#EH3 === UGLY === +# The following is an ugly little hack to check for $CPP in /lib/ and +# it should eventually be replaced with a more general function that +# searches a combo of the user's path and a list of "usual suspects" +# to find the correct location for binaries such as $CPP. +for i in " " "/lib/" ; do + echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP +done +#EH3 === UGLY === +echo "#define A a" | $CPP > test_cpp 2>&1 +RETVAL=$? +if test "x$RETVAL" != x0 ; then + cat <&2 + +Error: C pre-processor "$CPP" failed the test case: please specify using: + + 1) within the options file ("CPP=...") as specified by "-of=OPTFILE" + 2) the "./genmake_local" file + 3) with the CPP environment variable + +EOF + exit 1 +else + rm -f test_cpp +fi +look_for_makedepend +if test "x$LN" = x ; then + LN="ln -s" +fi +echo "test" > genmake_test_ln +$LN genmake_test_ln genmake_tlink +RETVAL=$? +if test "x$RETVAL" != x0 ; then + cat <&2 + +Error: The command "ln -s" failed -- please specify a working soft-link + command in the optfile. + +EOF + exit 1 +fi +test -L genmake_tlink > /dev/null 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + HAVE_TEST_L=t +fi +rm -f genmake_test_ln genmake_tlink + +# Check for broken *.F/*.f handling and fix if possible +check_for_broken_Ff + +if test ! "x$MPI" = x ; then + echo " Turning on MPI cpp macros" + DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI" +fi + +if test ! "x$TS" = x ; then + echo " Turning on timing per timestep" + if test ! "x$FOOLAD" = x ; then + DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP" + else + DEFINES="$DEFINES -DTIME_PER_TIMESTEP" + fi +fi +if test ! "x$PAPIS" = x ; then + echo " Turning on PAPI flop summary per timestep" + echo " Please make sure PAPIINC, PAPILIB are defined" + if test ! "x$FOOLAD" = x ; then + DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP" + else + DEFINES="$DEFINES -DUSE_PAPI_FLOPS" + fi + INCLUDES="$INCLUDES $PAPIINC" + LIBS="$LIBS $PAPILIB" +fi +if test ! "x$PCLS" = x ; then + echo " Turning on PCL counter summary per timestep" + echo " Please make sure PCLINC, PCLLIB are defined" + if test ! "x$FOOLAD" = x ; then + DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP" + else + DEFINES="$DEFINES -DUSE_PCL_FLOPS" + fi + INCLUDES="$INCLUDES $PCLINC" + LIBS="$LIBS $PCLLIB" +fi +if test ! "x$PAPI" = x ; then + if test ! "x$PAPIS" = x ; then + echo " PAPI performance analysis and flop summary per timestep cannot co-exist!" + echo " Sticking with PAPI flop summary per timestep!" + else + echo " Turning on performance analysis with PAPI" + echo " Please make sure PAPIINC, PAPILIB are defined" + DEFINES="$DEFINES -DUSE_PAPI" + INCLUDES="$INCLUDES $PAPIINC" + LIBS="$LIBS $PAPILIB" + fi +fi +if test ! "x$PCL" = x ; then + if test ! "x$PCLS" = x ; then + echo " PCL performance analysis and flop summary per timestep cannot co-exist!" + echo " Sticking with PCL flop summary per timestep!" + else + echo " Turning on performance analysis with PCL" + echo " Please make sure PCLINC, PCLLIB are defined" + DEFINES="$DEFINES -DUSE_PCL" + INCLUDES="$INCLUDES $PCLINC" + LIBS="$LIBS $PCLLIB" + fi +fi +if test ! "x$HPMT" = x ; then + if test ! "x$PAPI" = x ; then + echo " PAPI and the HPM Toolkit cannot co-exist!" + echo " Sticking with PAPI!" + else if test ! "x$PCL" = x ; then + echo " PCL and the HPM Toolkit cannot co-exist!" + echo " Sticking with PCL!" + else + echo " Turning on performance analysis with the HPM Toolkit" + echo " Please make sure HPMTINC, HPMTLIB are defined" + DEFINES="$DEFINES -DUSE_LIBHPM" + INCLUDES="$INCLUDES $HPMTINC" + LIBS="$LIBS $HPMTLIB" + fi + fi +fi +if test ! "x$GSL" = x ; then + echo " Turning on use of GSL to control floating point calculations" + echo " Please make sure GSLINC, GSLLIB are defined" + DEFINES="$DEFINES -DUSE_GSL_IEEE" + INCLUDES="$INCLUDES $GSLINC" + LIBS="$LIBS $GSLLIB" +fi + +printf "\n=== Checking system libraries ===\n" +printf " Do we have the system() command using $FC... " +cat > genmake_tcomp.$FS < genmake_tcomp.log 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + HAVE_SYSTEM=t + DEFINES="$DEFINES -DHAVE_SYSTEM" + echo "yes" else - if test "x$OPTFILE" = xNONE ; then - echo " OPTFILE=NONE so we'll try to use default settings" - else - if test -f "$OPTFILE" -a -r "$OPTFILE" ; then - echo " using OPTFILE=\"$OPTFILE\"" - source "$OPTFILE" - RETVAL=$? - if test "x$RETVAL" != x0 ; then - echo -n "Error: failed to source OPTFILE \"$OPTFILE\"" - echo "--please check that variable syntax is bash-compatible" - exit 1 - fi - else - echo "Error: can't read OPTFILE=\"$OPTFILE\"" - exit 1 - fi + HAVE_SYSTEM= + echo "no" +fi +rm -f genmake_tcomp* + +printf " Do we have the fdate() command using $FC... " +cat > genmake_tcomp.$FS < genmake_tcomp.log 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + HAVE_FDATE=t + DEFINES="$DEFINES -DHAVE_FDATE" + echo "yes" +else + HAVE_FDATE= + echo "no" +fi +rm -f genmake_tcomp* + +printf " Do we have the etime() command using $FC... " +cat > genmake_tcomp.$FS < genmake_tcomp.log 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + HAVE_ETIME=t + DEFINES="$DEFINES -DHAVE_ETIME" + echo "yes" +else + HAVE_ETIME= + echo "no" +fi +rm -f genmake_tcomp* + +printf " Can we call simple C routines (here, \"cloc()\") using $FC... " +check_HAVE_CLOC +if test "x$HAVE_CLOC" != x ; then + echo "yes" +else + echo "no" + if test "x$EMBED_SRC" = xt ; then + echo " WARNING: you requested file embedding but it has" + echo " been disabled since C code cannot be called" + EMBED_SRC= fi fi +rm -f genmake_t* + +printf " Can we unlimit the stack size using $FC... " +check_HAVE_SETRLSTK +if test "x$HAVE_SETRLSTK" = xt ; then + echo "yes" +else + echo "no" +fi +rm -f genmake_t* + +printf " Can we register a signal handler using $FC... " +check_HAVE_SIGREG +if test "x$HAVE_SIGREG" = xt ; then + echo "yes" +else + echo "no" +fi +rm -f genmake_t* + +printf " Can we use stat() through C calls... " +check_HAVE_STAT +if test "x$HAVE_STAT" != x ; then + echo "yes" +else + echo "no" +fi +rm -f genmake_t* + +printf " Can we create NetCDF-enabled binaries... " +check_netcdf_libs +if test "x$HAVE_NETCDF" != x ; then + echo "yes" +else + echo "no" +fi +DEFINES="$DEFINES $IGNORE_TIME" + +if test "x$EMBED_SRC" = xt ; then + build_embed_encode +fi +if test "x$EMBED_SRC" = xt ; then + ENABLE="$ENABLE embed_files" +fi + printf "\n=== Setting defaults ===\n" -echo -n " Adding MODS directories: " +printf " Adding MODS directories: " for d in $MODS ; do if test ! -d $d ; then echo echo "Error: MODS directory \"$d\" not found!" exit 1 else - echo -n " $d" + printf " $d" SOURCEDIRS="$SOURCEDIRS $d" INCLUDEDIRS="$INCLUDEDIRS $d" fi done echo -if test "x$MAKEFILE" = x ; then - MAKEFILE="Makefile" -fi if test "x${PLATFORM}" = x ; then PLATFORM=$p_PLATFORM fi -if test "x${ROOTDIR}" = x ; then - if test "${PWD##/*/}" = "bin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then - ROOTDIR=".." - else - for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do - if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then - ROOTDIR=$d - echo -n "Warning: ROOTDIR was not specified but there appears to be" - echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it." - break - fi - done - fi -fi -if test "x${ROOTDIR}" = x ; then - echo "Error: Cannot determine ROOTDIR for MITgcm code." - echo " Please specify a ROOTDIR using either an options " - echo " file or a command-line option." - exit 1 -fi -if test ! -d ${ROOTDIR} ; then - echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!" - exit 1 -fi - if test "x${EXEDIR}" = x ; then - if test "${PWD##/*/}" = "bin" -a -d ../exe -a $ROOTDIR = .. ; then + tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'` + if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then EXEDIR=../exe else EXEDIR=. @@ -546,9 +1769,36 @@ TOOLSDIR="$ROOTDIR/tools" fi if test ! -d ${TOOLSDIR} ; then - echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!" + echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!" exit 1 fi +if test "x$S64" = x ; then + echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + S64='$(TOOLSDIR)/set64bitConst.sh' + else + echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + S64='$(TOOLSDIR)/set64bitConst.csh' + else + cat < make_eesupp.errors 2>&1 + ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1 RETVAL=$? if test "x${RETVAL}" = x0 ; then rm -f make_eesupp.errors else echo "Error: problem encountered while building source files in eesupp:" - cat make_eesupp.errors + cat make_eesupp.errors 1>&2 exit 1 fi fi +#same for pkg/exch2 and pkg/regrid +for pdir in exch2 regrid ; do + if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then + echo " Making source files in pkg/${pdir} from templates" + ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + rm -f make_${pdir}.errors + else + echo "Error: problem encountered while building source files in pkg/${pdir}:" + cat make_${pdir}.errors 1>&2 + exit 1 + fi + fi +done + printf "\n=== Determining package settings ===\n" if test "x${PDEPEND}" = x ; then tmp=$ROOTDIR"/pkg/pkg_depend" @@ -587,44 +1853,64 @@ # Strip the comments and then convert the dependency file into # two arrays: PNAME, DNAME cat $PDEPEND | sed -e 's/#.*$//g' \ - | awk 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \ + | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \ > ./.pd_tmp RETVAL=$? if test ! "x${RETVAL}" = x0 ; then echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\"" exit 1 fi -source ./.pd_tmp +. ./.pd_tmp rm -f ./.pd_tmp -echo -n " checking default package list: " +# Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups" +# file should eventually be added so that, for convenience, one can +# specify groups of packages using names like "ocean" and "atmosphere". +echo " checking default package list: " +if test "x${PDEFAULT}" = x ; then + for i in "." $MODS ; do + if test -r $i"/packages.conf" ; then + PDEFAULT=$i"/packages.conf" + break + fi + done +fi if test "x${PDEFAULT}" = x ; then PDEFAULT="$ROOTDIR/pkg/pkg_default" fi if test "x${PDEFAULT}" = xNONE ; then - echo "default packages file disabled" + echo " default packages file disabled" else if test ! -r $PDEFAULT ; then - echo "" echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\"" else - echo " using PDEFAULT=\"$PDEFAULT\"" + echo " using PDEFAULT=\"$PDEFAULT\"" # Strip the comments and add all the names - def=`cat $PDEFAULT | sed -e 's/#.*$//g' | awk '(NF>0){print $0}'` + def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'` RETVAL=$? if test "x${RETVAL}" != x0 ; then - echo -n "Error: can't parse default package list " + printf "Error: can't parse default package list " echo "-- please check PDEFAULT=\"$PDEFAULT\"" exit 1 fi for i in $def ; do PACKAGES="$PACKAGES $i" done - echo " packages are: $PACKAGES" + echo " before group expansion packages are: $PACKAGES" + RET=1 + while test $RET = 1 ; do expand_pkg_groups; RET=$?; done + echo " after group expansion packages are: $PACKAGES" fi fi echo " applying DISABLE settings" +for i in $PACKAGES ; do + echo $i >> ./.tmp_pack +done +for i in `grep "-" ./.tmp_pack` ; do + j=`echo $i | sed 's/[-]//'` + DISABLE="$DISABLE $j" +done pack= for p in $PACKAGES ; do addit="t" @@ -639,23 +1925,59 @@ done PACKAGES="$pack" echo " applying ENABLE settings" -rm -f ./.tmp_pack +echo "" > ./.tmp_pack PACKAGES="$PACKAGES $ENABLE" +# Test if each explicitly referenced package exists for i in $PACKAGES ; do - if test ! -d "$ROOTDIR/pkg/$i" ; then + j=`echo $i | sed 's/[-+]//'` + if test ! -d "$ROOTDIR/pkg/$j" ; then echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\"" - exit 1 + exit 1 fi echo $i >> ./.tmp_pack done -pack=`cat ./.tmp_pack | sort | uniq` -rm -f ./.tmp_pack PACKAGES= -for i in $pack ; do +for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do PACKAGES="$PACKAGES $i" done +rm -f ./.tmp_pack echo " packages are: $PACKAGES" +# Check availability of NetCDF and then either build the MNC template +# files or delete mnc from the list of available packages. +echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1 +RETVAL=$? +if test "x$RETVAL" = x0 ; then + if test "x$HAVE_NETCDF" != xt ; then + cat < make_mnc.errors 2>&1 + RETVAL=$? + if test "x${RETVAL}" = x0 ; then + rm -f make_mnc.errors + else + echo "Error: problem encountered while building source files in pkg/mnc:" + cat make_mnc.errors 1>&2 + exit 1 + fi + fi +fi + echo " applying package dependency rules" ck= while test "x$ck" != xtt ; do @@ -720,7 +2042,8 @@ echo " the dependency rules for \"$dname\"" exit 1 fi - i=$(( $i + 1 )) + i=`echo "$i + 1" | bc -l` + #i=$(( $i + 1 )) done ck=$ck"t" done @@ -730,73 +2053,24 @@ if test -d $adr ; then SOURCEDIRS="$SOURCEDIRS $adr" INCLUDEDIRS="$INCLUDEDIRS $adr" + if test "x$i" = xautodiff ; then + AUTODIFF_PKG_USED=t + fi else echo "Error: the directory \"$adr\" for package $i doesn't exist" exit 1 fi done -# This is compatible with the old genmake. The "DISABLE_*" flags -# need to be replaced by the "ALLOW_*" flags set below. -# -# echo -n " Setting package-specific CPP flags: " -# pkrm=( mom_fluxform mom_vecinv generic_advdiff ) -# pkrmdef=( -DDISABLE_MOM_FLUXFORM -DDISABLE_MOM_VECINV -DDISABLE_GENERIC_ADVDIFF -DDISABLE_DEBUGMODE ) -# echo -n " " -# i=0 -# while test $i -lt "${#pkrm[@]}" ; do -# echo "$PACKAGES" | grep "${pk[$i]}" > /dev/null 2>&1 -# RETVAL=$? -# if test "x$RETVAL" = x1 ; then -# DEFINES="$DEFINES ${pkdef[$i]}" -# echo -n " ${pkdef[$i]}" -# fi -# i=$(( $i + 1 )) -# done -# echo - -echo " Setting package-specific CPP flags in CPP_OPTIONS.h:" -CPP_OPTIONS= -spaths=". $SOURCEDIRS" -for i in $spaths ; do - try="$i/CPP_OPTIONS.h" - # echo -n " trying $try : " - if test -f $try -a -r $try ; then - echo " found CPP_OPTIONS=\"$try\"" - CPP_OPTIONS="$try" - if test "x$i" != "x." ; then - cp -f $CPP_OPTIONS . - fi - break - fi -done -if test "x$CPP_OPTIONS" = x ; then - echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths" - exit 1 -fi -if test -e CPP_OPTIONS.h ; then - if test ! -e CPP_OPTIONS.h.bak ; then - cp -f CPP_OPTIONS.h CPP_OPTIONS.h.bak - fi - cat CPP_OPTIONS.h \ - | awk 'BEGIN{p=1;} ($1=="C===" && $2=="GENMAKE"){p=0;} {if (p==1) print $0}' \ - > CPP_OPTIONS.h.tmp -fi -cat <>CPP_OPTIONS.h.tmp -C=== GENMAKE v2 === -C The following defines have been set by GENMAKE, so please edit -C them only if you know what you're doing. In general, you should -C add or remove packages by re-running genmake with different -C "-enable" and/or "-disable" options. - -C Packages disabled by genmake: -EOF +# Create a list of #define and #undef to enable/disable packages +PACKAGES_DOT_H=PACKAGES_CONFIG.h # The following UGLY HACK sets multiple "#undef"s and it needs to go # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h # file would eventually be split up so that all package-related #define # statements could be separated and handled only by genmake. names=`ls -1 "$ROOTDIR/pkg"` all_pack= +DISABLED_PACKAGES= for n in $names ; do if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then has_pack="f" @@ -807,114 +2081,225 @@ fi done if test "x$has_pack" = xf ; then - undef=`echo "ALLOW_$n" | awk '{print toupper($0)}'` - echo "#undef $undef" >> CPP_OPTIONS.h.tmp - -#EH3 WARNING : This is an UGLY HACK that needs to be removed!!! - case $n in - mom_fluxform) - DEFINES="$DEFINES -DDISABLE_MOM_FLUXFORM" - ;; - mom_vecinv) - DEFINES="$DEFINES -DDISABLE_MOM_VECINV" - ;; - generic_advdiff) - DEFINES="$DEFINES -DDISABLE_GENERIC_ADVDIFF" - ;; - debug) - DEFINES="$DEFINES -DDISABLE_DEBUGMODE" - ;; - esac -#EH3 WARNING : This is an UGLY HACK that needs to be removed!!! - + undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'` + DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef" fi fi done -cat <>CPP_OPTIONS.h.tmp - -C Packages enabled by genmake: -EOF +ENABLED_PACKAGES= for i in $PACKAGES ; do - def=`echo "ALLOW_$i" | awk '{print toupper($0)}'` - echo "#define $def" >> CPP_OPTIONS.h.tmp + def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'` + ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def" +#eh3 DEFINES="$DEFINES -D$def" #EH3 WARNING : This is an UGLY HACK that needs to be removed!!! case $i in aim_v23) - echo "#define ALLOW_AIM" >> CPP_OPTIONS.h.tmp + ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM" + echo "Warning: ALLOW_AIM is set to enable aim_v23." ;; esac #EH3 WARNING : This is an UGLY HACK that needs to be removed!!! done -mv -f CPP_OPTIONS.h.tmp CPP_OPTIONS.h echo " Adding STANDARDDIRS" BUILDDIR=${BUILDDIR:-.} -STANDARDDIRS=${STANDARDDIRS:-"eesupp model"} -for d in $STANDARDDIRS ; do - adr="$ROOTDIR/$d/src" - if test ! -d $adr ; then - echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" - echo " is correct and that you correctly specified the STANDARDDIRS option" - exit 1 - else - SOURCEDIRS="$SOURCEDIRS $adr" - fi - adr="$ROOTDIR/$d/inc" - if test ! -d $adr ; then - echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" - echo " is correct and that you correctly specified the STANDARDDIRS option" - exit 1 - else - INCLUDEDIRS="$INCLUDEDIRS $adr" +if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then + STANDARDDIRS="eesupp model" +fi +if test "x$STANDARDDIRS" != x ; then + for d in $STANDARDDIRS ; do + adr="$ROOTDIR/$d/src" + if test ! -d $adr ; then + echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" + echo " is correct and that you correctly specified the STANDARDDIRS option" + exit 1 + else + SOURCEDIRS="$SOURCEDIRS $adr" + fi + adr="$ROOTDIR/$d/inc" + if test ! -d $adr ; then + echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\"" + echo " is correct and that you correctly specified the STANDARDDIRS option" + exit 1 + else + INCLUDEDIRS="$INCLUDEDIRS $adr" + fi + done +fi + +echo " Searching for *OPTIONS.h files in order to warn about the presence" +echo " of \"#define \"-type statements that are no longer allowed:" +CPP_OPTIONS= +CPP_EEOPTIONS= +spaths=". $INCLUDEDIRS" +names=`ls -1 "$ROOTDIR/pkg"` +for i in $spaths ; do + try="$i/CPP_OPTIONS.h" + if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then + echo " found CPP_OPTIONS=\"$try\"" + CPP_OPTIONS="$try" + # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h + for n in $names ; do + test_for_package_in_cpp_options $CPP_OPTIONS $n + done + fi + try="$i/CPP_EEOPTIONS.h" + if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then + echo " found CPP_EEOPTIONS=\"$try\"" + # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h +#**** not yet enabled **** +# test_for_mpi_in_cpp_eeoptions $try +#**** not yet enabled **** + CPP_EEOPTIONS="$try" fi done +if test "x$CPP_OPTIONS" = x ; then + echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths" + exit 1 +fi +# Here, we build the list of files to be "run through" the adjoint +# compiler. +if test -f ./ad_files ; then + rm -f ./ad_files +fi +echo " Creating the list of files for the adjoint compiler." +for i in $SOURCEDIRS ; do + list_files=`( cd $i && ls -1 *.list 2>/dev/null )` + for j in $list_files ; do + cat $i/$j >> ad_files + done +done +if test ! "x"$FS = "x.f" ; then + cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f + mv -f ad_files_f ad_files +fi echo echo "=== Creating the Makefile ===" echo " setting INCLUDES" for i in $INCLUDEDIRS ; do - if test -d $i ; then - INCLUDES="$INCLUDES -I$i" - else + if test ! -d $i ; then echo "Warning: can't find INCLUDEDIRS=\"$i\"" fi done +if test ! "x$DIVA" = x ; then + echo " Creating the pseudo-MPI include directory" + INCLUDES="-I./mpi_headers $INCLUDES" + rm -rf ./mpi_headers + mkdir -p ./mpi_headers + + if test "x$MPIINCLUDEDIR" = x ; then + if test "x$MPIHOME" = x ; then + MPIHOME='/usr' + fi + MPIINCLUDEDIR='$MPIHOME/include' + fi + + if test -r $MPIINCLUDEDIR/mpif.h ; then + for i in $MPI_HEADER_FILES; do + cp -p $MPIINCLUDEDIR/$i ./mpi_headers + done + + perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h + else + echo " We cannot create a copy of mpif.h!" + exit -1 + fi +fi + echo " Determining the list of source and include files" rm -rf .links.tmp mkdir .links.tmp +touch .links.tmp/foo +if test ! -r ".links.tmp/foo" ; then + echo + echo "ERROR : something is wrong with your directory permissions or" + echo " your user file-creation mask (\"umask\") since creating a" + echo " sub-dir, touch-ing a file within it, and then reading it is" + echo " not working. Please try setting your umask to something" + echo " sane such as:" + echo + echo " umask 0002" + echo + echo " and please verify that you have the proper permissions for" + echo " creating sub-directories and then reading files created" + echo " within them." + echo + exit 1 +fi +rm -f .links.tmp/foo echo "# This section creates symbolic links" > srclinks.tmp echo "" >> srclinks.tmp -echo -n 'SRCFILES = ' > srclist.inc -echo -n 'CSRCFILES = ' > csrclist.inc -echo -n 'HEADERFILES = ' > hlist.inc -alldirs=". $SOURCEDIRS $INCLUDEDIRS" +printf 'SRCFILES = ' > srclist.inc +printf 'CSRCFILES = ' > csrclist.inc +printf 'F90SRCFILES = ' > f90srclist.inc +printf 'HEADERFILES = ' > hlist.inc +printf 'AD_FLOW_FILES = ' > ad_flow_files.inc +alldirs="$SOURCEDIRS $INCLUDEDIRS ." for d in $alldirs ; do deplist= - sfiles=`( cd $d; echo *.[h,c,F] )` + sfiles=`( cd $d; echo *.[h,c,F] *.flow )` + sfiles=`( echo $sfiles; cd $d; echo *.F90 )` for sf in $sfiles ; do if test ! -r ".links.tmp/$sf" ; then if test -f "$d/$sf" ; then - extn=`echo $sf | awk -F '.' '{print $NF}'` - touch .links.tmp/$sf - deplist="$deplist $sf" - case $extn in - F) - echo " \\" >> srclist.inc - echo -n " $sf" >> srclist.inc + ignore_f=f + case $d/$sf in + ./$PACKAGES_DOT_H) + ignore_f=t + ;; + ./AD_CONFIG.h) + ignore_f=t + ;; + ./FC_NAMEMANGLE.h) + ignore_f=t ;; - c) - echo " \\" >> csrclist.inc - echo -n " $sf" >> csrclist.inc + ./BUILD_INFO.h) + ignore_f=t ;; - h) - echo " \\" >> hlist.inc - echo -n " $sf" >> hlist.inc + ./EMBEDDED_FILES.h) + ignore_f=t ;; - esac + *) + # For the local directory *ONLY*, + # ignore all soft-links + if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then + ignore_f=t + else + touch .links.tmp/$sf + deplist="$deplist $sf" + fi + ;; + esac + if test "x$ignore_f" = xf ; then + extn=`echo $sf | $AWK -F. '{print $NF}'` + case $extn in + F) + echo " \\" >> srclist.inc + printf " $sf" >> srclist.inc + ;; + F90) + echo " \\" >> f90srclist.inc + printf " $sf" >> f90srclist.inc + ;; + c) + echo " \\" >> csrclist.inc + printf " $sf" >> csrclist.inc + ;; + h) + echo " \\" >> hlist.inc + printf " $sf" >> hlist.inc + ;; + flow) + echo " \\" >> ad_flow_files.inc + printf " $sf" >> ad_flow_files.inc + ;; + esac + fi fi fi done @@ -928,9 +2313,11 @@ rm -rf .links.tmp echo "" >> srclist.inc echo "" >> csrclist.inc +echo "" >> f90srclist.inc echo "" >> hlist.inc +echo "" >> ad_flow_files.inc -if test -e $MAKEFILE ; then +if test -f $MAKEFILE ; then mv -f $MAKEFILE "$MAKEFILE.bak" fi echo " Writing makefile: $MAKEFILE" @@ -939,10 +2326,17 @@ echo "# This makefile was generated automatically on" >> $MAKEFILE echo "# $THISDATE" >> $MAKEFILE echo "# by the command:" >> $MAKEFILE -echo "# $0 $@" >> $MAKEFILE +echo "# $0 $G2ARGS" >> $MAKEFILE echo "# executed by:" >> $MAKEFILE -echo "# $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE +echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE + +EXE_AD=$EXECUTABLE"_ad" +EXE_FTL=$EXECUTABLE"_ftl" +EXE_SVD=$EXECUTABLE"_svd" + cat >>$MAKEFILE <>$MAKEFILE +else + echo "EMBEDDED_FILES = " >>$MAKEFILE +fi + +# Note: figure out some way to add Hyades JAM libraries here cat >>$MAKEFILE <> $MAKEFILE -cat csrclist.inc >> $MAKEFILE -cat hlist.inc >> $MAKEFILE -echo 'F77FILES = $(SRCFILES:.F=.f)' >> $MAKEFILE -echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o)' >> $MAKEFILE - -rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp +cat srclist.inc >> $MAKEFILE +cat csrclist.inc >> $MAKEFILE +cat f90srclist.inc >> $MAKEFILE +cat hlist.inc >> $MAKEFILE +cat ad_flow_files.inc >> $MAKEFILE +echo >> $MAKEFILE +echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE +echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE +echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE +echo >> $MAKEFILE +echo '.SUFFIXES:' >> $MAKEFILE +echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE +rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc +rm -f ad_flow_files.inc cat >>$MAKEFILE <> \$(MAKEFILE) + -rm -f makedepend.out -links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) +lib: libmitgcmuv.a -small_f: \$(F77FILES) +libmitgcmuv.a: \$(OBJFILES) + ar rcv libmitgcmuv.a \$(OBJFILES) + +links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES) + +small_f: \$(F77FILES) \$(F90FILES) output.txt: \$(EXECUTABLE) @printf 'running ... ' @\$(EXECUTABLE) > \$@ clean: - -rm -rf *.o *.f *.p ${RMFILES} work.{pc,pcl} + -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template Clean: @make clean @make cleanlinks - -rm -f Makefile.bak + -rm -f \$(SPECIAL_FILES) + -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak CLEAN: @make Clean -find \$(EXEDIR) -name "*.meta" -exec rm {} \; -find \$(EXEDIR) -name "*.data" -exec rm {} \; -find \$(EXEDIR) -name "fort.*" -exec rm {} \; - -rm -f \$(EXECUTABLE) + -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime + -rm -rf mnc_test_* +#eh3 Makefile: makefile makefile: - ${0} $@ + $THIS_SCRIPT $G2ARGS cleanlinks: -find . -type l -exec rm {} \; -# The normal chain of rules is ( .F - .f - .o ) -.F.f: +# Special targets (SPECIAL_FILES) which are create by make +${PACKAGES_DOT_H}: + @echo Creating \$@ ... + @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@ +AD_CONFIG.h: + @echo Creating \$@ ... + @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@ +FC_NAMEMANGLE.h: + @echo Creating \$@ ... + echo "$FC_NAMEMANGLE" > \$@ + +BUILD_INFO.h: + @echo Creating \$@ ... +EOF + +test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE +test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE +test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE +test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE + +if test "x$EMBED_SRC" = xt ; then + cat >>$MAKEFILE <>$MAKEFILE < \$@ -.f.o: +.$FS.o: \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$< +.F90.$FS90: + \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ +.$FS90.o: + \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$< .c.o: - \$(CC) \$(CFLAGS) -c \$< + \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$< -# Special exceptions that use the ( .F - .p - .f - .o ) rule-chain +# Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain .F.p: \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@ -.p.f: +.p.$FS: \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$< +#========================================= +#=== Automatic Differentiation Rules === + +TAMC = ${TAMC} +TAF = ${TAF} + +TAF_EXTRA = ${TAF_EXTRA} +TAMC_EXTRA = ${TAMC_EXTRA} + +EOF + +ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS" +ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS" +ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS" +for i in $ad_vars ; do + name=$i + t1="t2=\$"`echo "$i"` + eval $t1 + printf "%-20s = " $name >> $MAKEFILE + echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE +done + +echo " Add the source list for AD code generation" +echo >> $MAKEFILE +printf "AD_FILES = " >> $MAKEFILE +AD_FILES=`cat ad_files` +for i in $AD_FILES ; do + echo " \\" >> $MAKEFILE + printf " $i" >> $MAKEFILE +done +echo >> $MAKEFILE +rm -f ad_files + +cat >>$MAKEFILE < ad_config.template + cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h + -rm -f ad_config.template + @make \$(F77FILES) + @make \$(AD_FLOW_FILES) + cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS + +ad_taf_output.$FS: ad_input_code.$FS + \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS + cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS + +adtafonly: + \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS + cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS + +\${EXE_AD}: ad_taf_output.o \$(OBJFILES) + \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS) + +ad_tamc_output.$FS: ad_input_code.$FS + \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS + cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS + +ad_tamc: ad_tamc_output.o \$(OBJFILES) + \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS) + +adonlyfwd: + patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff + +adtrick: + patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff + +# ... FTL ... +ftlall: ftl_taf +ftltaf: ftl_taf_output.$FS +ftltamc: ftl_tamc_output.$FS + +ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES) + @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template + cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h + -rm -f ftl_config.template + @make \$(F77FILES) + @make \$(AD_FLOW_FILES) + cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS + +ftl_taf_output.$FS: ftl_input_code.$FS + \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS + cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS + +ftltafonly: + \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS + cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS + +ftl_taf: ftl_taf_output.o \$(OBJFILES) + \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS) + +ftl_tamc_output.$FS: ftl_input_code.$FS + \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS + cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS + +ftl_tamc: ftl_tamc_output.o \$(OBJFILES) + \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS) + + +# ... SVD ... +svdtaf: ad_taf_output.$FS ftl_taf_output.$FS + @echo "--->>> Only ran TAF to generate SVD code! <<<---" + @echo "--->>> Do make svdall afterwards to compile. <<<---" +svdall: svd_touch svd_taf + +svd_taf: \$(OBJFILES) + \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS) + + @echo "--->>> Only COMPILE svd code! <<<---" + @echo "--->>> Assumes you previously <<<---" + @echo "--->>> did make svdtaf <<<---" + +svd_touch: + @echo "--->>> Only COMPILE svd code! <<<---" + @echo "--->>> Assumes you previously <<<---" + @echo "--->>> did make svdtaf <<<---" + touch ad_taf_output.$FS ftl_taf_output.$FS + \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS + \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS + @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template + cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h + -rm -f ftl_config.template + +#========================================= + EOF +if test "x$EXEHOOK" != x ; then + printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE +fi + echo " Making list of \"exceptions\" that need \".p\" files" for i in $KPPFILES ; do base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'` @@ -1077,7 +2694,7 @@ if test "x$RETVAL" != x0 ; then echo "Error: unable to add file \"$i\" to the exceptions list" fi - echo "$base.f: $base.p" >> $MAKEFILE + echo "$base.$FS: $base.p" >> $MAKEFILE done echo " Making list of NOOPTFILES" @@ -1087,7 +2704,7 @@ if test "x$RETVAL" != x0 ; then echo "Error: unable to add file \"$i\" to the exceptions list" fi - echo "$base.o: $base.f" >> $MAKEFILE + echo "$base.o: $base.$FS" >> $MAKEFILE printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE done @@ -1099,3 +2716,32 @@ printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE printf "\n=== Done ===\n" + +# Create special header files +$BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp" +if test ! -f $PACKAGES_DOT_H ; then + mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H +else + cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1 + RETVAL=$? + if test "x$RETVAL" = x0 ; then + rm -f $PACKAGES_DOT_H".tmp" + else + mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak" + mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H + fi +fi +if test ! -f AD_CONFIG.h ; then + $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h +fi + + +# Write the "state" for future records +if test "x$DUMPSTATE" != xf ; then + printf "" > genmake_state + for i in $gm_state ; do + t1="t2=\$$i" + eval $t1 + echo "$i='$t2'" >> genmake_state + done +fi