--- MITgcm/tools/genmake2	2009/07/29 14:17:34	1.196
+++ MITgcm/tools/genmake2	2009/11/04 16:58:57	1.199
@@ -1,6 +1,6 @@
 #! /usr/bin/env bash
 #
-# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.196 2009/07/29 14:17:34 utke Exp $
+# $Header: /home/ubuntu/mnt/e9_copy/MITgcm/tools/genmake2,v 1.199 2009/11/04 16:58:57 utke Exp $
 #
 # Makefile generator for MITgcm UV codes
 #   created  by cnh 03/98
@@ -2783,7 +2783,7 @@
 	-rm -f ad_config.template
 	@make \$(F77_PP_SRC_FILES)
 	@make \$(FLOFILES)
-	cat \$(FLOFILES) \$(AD_FILES) > ad_input_code.$FS
+	cat \$(FLOFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS
 
 ad_taf_output.$FS: ad_input_code.$FS
 	\$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
@@ -3081,7 +3081,7 @@
 	# this step also creates the file postProcess.make but we cannot 
 	# name it as the target or else make will try to remake it for 
 	# the include directive above for any rule, e.g. make clean
-	./postProcess.py --progress --timing -m r -i ../OAD_support/ad_inline.f --width 4 \$<
+	./postProcess.py --progress --timing --outputFormat=fixed -m r -i ../OAD_support/ad_inline.f --width 4 \$<
 
 # setup some links
 %.xsd:
@@ -3106,7 +3106,7 @@
 oadDriver:
 	\$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@
 
-AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp
+AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp \$(PPEXTRAS:.F=.f)
 
 # ============ end OpenAD specific section ==============