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revision 1.58 by afe, Fri Jan 9 22:08:39 2004 UTC revision 1.86 by edhill, Sat Jul 17 02:52:14 2004 UTC
# Line 37  test_for_string_in_file() { Line 37  test_for_string_in_file() {
37      grep -i "$strng" $file > /dev/null 2>&1      grep -i "$strng" $file > /dev/null 2>&1
38      RETVAL=$?      RETVAL=$?
39      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
40          echo -n "Error: In $file there is an illegal line: "          printf "Error: In $file there is an illegal line: "
41          grep -i "$strng" $file          grep -i "$strng" $file
42          return 1          return 1
43      fi      fi
# Line 67  expand_pkg_groups() { Line 67  expand_pkg_groups() {
67          done          done
68          PACKAGES=$new_packages          PACKAGES=$new_packages
69          rm -f ./p[1,2].tmp          rm -f ./p[1,2].tmp
70            return $matched
71      else      else
72          echo "Warning: can't read package groups definition file: $PKG_GROUPS"          echo "Warning: can't read package groups definition file: $PKG_GROUPS"
73      fi      fi
74  }  }
75    
76    #  Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
77    #  cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
78    check_for_broken_Ff()  {
79        #  Do we have defaults for $FS and/or $FS90 ?
80        tfs=f
81        tfs9=f90
82        if test "x$FS" != x ; then
83            tfs="$FS"
84        fi
85        if test "x$FS90" != x ; then
86            tfs9="$FS90"
87        fi
88    
89        #  First check the ability to create a *.F/.f pair.
90        cat <<EOF >> genmake_hello.F
91          program hello
92          write(*,*) 'hi'
93          stop
94          end
95    EOF
96        cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
97        RETVAL=$?
98        if test "x$RETVAL" != x0 ; then
99            if test "x$FS" = x ; then
100                FS='for'
101                FS90='fr9'
102                check_for_broken_Ff
103            else
104                cat <<EOF 2>&1
105    ERROR: Your file system cannot distinguish between *.F and *.f files
106      (fails the "cp" test) and this program cannot find a suitable
107      replacement extension.  Please try a different build environment or
108      contact the <MITgcm-support@mitgcm.org> list for help.
109    
110    EOF
111                exit -1
112            fi
113            return
114        fi
115        rm -f genmake_hello.*
116    
117        #  Check the ability of ${MAKE} and ${LN} to use the current set
118        #  of extensions.
119        cat <<EOF >> genmake_hello.F
120          program hello
121          write(*,*) 'hi'
122          stop
123          end
124    EOF
125        test -e Makefile  &&  mv -f Makefile Makefile.bak
126        cat <<EOF >> Makefile
127    %.$tfs : %.F
128    .SUFFIXES:
129    genmake_hello.$tfs: genmake_hello.F
130            $LN genmake_hello.F genmake_hello.$tfs
131    EOF
132        $MAKE "genmake_hello."$tfs > /dev/null 2>&1
133        RETVAL=$?
134        if test "x$RETVAL" != x0 -o ! -e "genmake_hello."$tfs ; then
135            if test "x$FS" = x ; then
136                FS='for'
137                FS90='fr9'
138                check_for_broken_Ff
139            else
140                cat <<EOF 2>&1
141    ERROR: Your file system cannot distinguish between *.F and *.f files
142      (fails the "make/ln" test) and this program cannot find a suitable
143      replacement extension.  Please try a different build environment or
144      contact the <MITgcm-support@mitgcm.org> list for help.
145    
146    EOF
147                exit -1
148                return
149            fi
150        fi
151        rm -f genmake_hello.* Makefile
152        test -e Makefile  &&  mv -f Makefile.bak Makefile
153    
154        #  If we make it here, use the extensions
155        FS=$tfs
156        FS90=$tfs9
157        return
158    }
159    
160    
161    look_for_makedepend()  {
162    
163        #  The "original" makedepend is part of the Imake system that is
164        #  most often distributed with XFree86 or with an XFree86 source
165        #  package.  As a result, many machines (eg. generic Linux) do not
166        #  have a system-default "makedepend" available.  For those
167        #  systems, we have two fall-back options:
168        #
169        #    1) a makedepend implementation shipped with the cyrus-imapd
170        #       package:  ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
171        #
172        #    2) a known-buggy xmakedpend shell script
173        #
174        #  So the choices are, in order:
175        #
176        #    1) use the user-specified program
177        #    2) use a system-wide default
178        #    3) locally build and use the cyrus implementation
179        #    4) fall back to the buggy local xmakedpend script
180        #
181        if test "x${MAKEDEPEND}" = x ; then
182            which makedepend > /dev/null 2>&1
183            RV0=$?
184            cat <<EOF >> genmake_tc.f
185          program test
186          write(*,*) 'test'
187          stop
188          end
189    EOF
190            makedepend genmake_tc.f > /dev/null 2>&1
191            RV1=$?
192            if test "x${RV0}${RV1}" = x00 ; then
193                MAKEDEPEND=makedepend
194            else
195                echo "    a system-default makedepend was not found."
196                
197                #  Try to build the cyrus implementation
198                rm -f ./genmake_cy_md
199                (
200                    cd $ROOTDIR/tools/cyrus-imapd-makedepend  \
201                        &&  ./configure > /dev/null 2>&1  \
202                        &&  make > /dev/null 2>&1
203                    if test -x ./makedepend.exe ; then
204                        $LN ./makedepend.exe ./makedepend
205                    fi
206                    ./makedepend ifparser.c > /dev/null 2>&1  \
207                        &&  echo "true"
208                ) > ./genmake_cy_md
209                grep true ./genmake_cy_md > /dev/null 2>&1
210                RETVAL=$?
211                if test "x$RETVAL" = x0 ; then
212                    MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
213                else
214                    MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
215                fi
216                rm -f ./genmake_cy_md
217            fi
218        fi
219    }
220    
221    
222  # Guess possible config options for this host  # Guess possible config options for this host
223  find_possible_configs()  {  find_possible_configs()  {
224    
# Line 80  find_possible_configs()  { Line 227  find_possible_configs()  {
227      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`      tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
228      tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`      tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
229      tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`      tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
230      PLATFORM=$tmp2      tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
231        PLATFORM=$tmp3
232        echo $PLATFORM | grep cygwin > /dev/null 2>&1  &&  PLATFORM=cygwin_ia32
233      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`      OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
234      echo "  The platform appears to be:  $PLATFORM"      echo "  The platform appears to be:  $PLATFORM"
235            
# Line 100  find_possible_configs()  { Line 249  find_possible_configs()  {
249          CPP="cpp -traditional -P"          CPP="cpp -traditional -P"
250      fi      fi
251    
252      # makedepend is not always available      look_for_makedepend
     if test "x${MAKEDEPEND}" = x ; then  
       which makedepend >& /dev/null  
       RETVAL=$?  
       if test "x${RETVAL}" = x1 ; then  
          echo "    makedepend was not found. Using xmakedpend instead."  
          MAKEDEPEND='$(TOOLSDIR)/xmakedepend'  
       fi  
     fi  
253    
254      # look for possible fortran compilers      # look for possible fortran compilers
255      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"
# Line 145  EOF Line 286  EOF
286          echo "   "$p_FC          echo "   "$p_FC
287          if test "x$FC" = x ; then          if test "x$FC" = x ; then
288              FC=`echo $p_FC | $AWK '{print $1}'`              FC=`echo $p_FC | $AWK '{print $1}'`
289                echo "  Setting FORTRAN compiler to: "$FC
290          fi          fi
291      fi      fi
292    
293      for i in $p_FC ; do      if test "x$OPTFILE" = x ; then
294          p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i          OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
295          if test -r $p_OF ; then          if test ! -r $OPTFILE ; then
296              OPTFILE=$p_OF               echo "  I looked for the file "$OPTFILE" but did not find it"
297              echo "  The options file:  $p_OF"          fi
298              echo "    appears to match so we'll use it."      fi
299              break  #    echo "  The options file:  $p_OF"
300          fi  #    echo "    appears to match so we'll use it."
301      done  #   for i in $p_FC ; do
302    #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
303    #if test -r $p_OF ; then
304    #    OPTFILE=$p_OF
305    #    echo "  The options file:  $p_OF"
306    #    echo "    appears to match so we'll use it."
307    #    break
308    #fi
309    #   done
310      if test "x$OPTFILE" = x ; then      if test "x$OPTFILE" = x ; then
311          cat 1>&2 <<EOF          cat 1>&2 <<EOF
312    
# Line 215  get_pdepend_list()  { Line 365  get_pdepend_list()  {
365      . ./.pd_tmp      . ./.pd_tmp
366      rm -f ./.pd_tmp      rm -f ./.pd_tmp
367    
368      echo -n "PNAME = "${}      printf "PNAME = "${}
369  }  }
370    
371    
# Line 229  Usage: "$0" [OPTIONS] Line 379  Usage: "$0" [OPTIONS]
379      -help | --help | -h | --h      -help | --help | -h | --h
380            Print this help message and exit.            Print this help message and exit.
381    
382        -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
383          -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
384              Use "NAME" as the adoptfile.  By default, the file at
385              "tools/adjoint_options/adjoint_default" will be used.
386    
387      -nooptfile | --nooptfile      -nooptfile | --nooptfile
388        -optfile NAME | --optfile NAME | -of NAME | --of NAME        -optfile NAME | --optfile NAME | -of NAME | --of NAME
389        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME        -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
# Line 253  Usage: "$0" [OPTIONS] Line 408  Usage: "$0" [OPTIONS]
408        --makefile=NAME | -mf=NAME        --makefile=NAME | -mf=NAME
409            Call the makefile "NAME".  The default is "Makefile".            Call the makefile "NAME".  The default is "Makefile".
410    
411        -makedepend NAME | -md NAME
412          --makedepend=NAME | -md=NAME
413              Use "NAME" for the MAKEDEPEND program.
414    
415      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME      -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
416        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME        -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
417            Specify the location of the MITgcm ROOTDIR as "NAME".            Specify the location of the MITgcm ROOTDIR as "NAME".
# Line 294  Usage: "$0" [OPTIONS] Line 453  Usage: "$0" [OPTIONS]
453            *only* works if it is supported by the OPTFILE that            *only* works if it is supported by the OPTFILE that
454            is being used.            is being used.
455    
456        -mpi | --mpi
457              Include MPI header files and link to MPI libraries
458        -mpi=PATH | --mpi=PATH
459              Include MPI header files and link to MPI libraries using MPI_ROOT
460              set to PATH. i.e. Include files from $PATH/include, link to libraries
461              from $PATH/lib and use binaries from $PATH/bin.
462    
463        -bash NAME
464              Explicitly specify the Bourne or BASH shell to use
465    
466    While it is most often a single word, the "NAME" variables specified    While it is most often a single word, the "NAME" variables specified
467    above can in many cases be a space-delimited string such as:    above can in many cases be a space-delimited string such as:
468    
# Line 437  EOF Line 606  EOF
606  }  }
607    
608    
609    check_netcdf_libs()  {
610        cat <<EOF > genmake_tnc.for
611          program fgennc
612    #include "netcdf.inc"
613          integer iret, ncid, xid
614          iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
615          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
616          iret = nf_def_dim(ncid, 'X', 11, xid)
617          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
618          iret = nf_close(ncid)
619          IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
620          end
621    EOF
622        $CPP genmake_tnc.for > genmake_tnc.f  \
623            &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1
624        RET_COMPILE=$?
625        test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
626        RETVAL=$?
627        if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
628            HAVE_NETCDF=t
629        else
630            # try again with "-lnetcdf" added to the libs
631            $CPP genmake_tnc.for > genmake_tnc.f  \
632                &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \
633                $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1
634            RET_COMPILE=$?
635            test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
636            RETVAL=$?
637            if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
638                LIBS="$LIBS -lnetcdf"
639                HAVE_NETCDF=t
640            else
641                cat genmake_tnc.log >> genmake_warnings
642            fi
643        fi
644        rm -f genmake_tnc*
645    }
646    
647    
648    
649    ###############################################################################
650    #   Sequential part of script starts here
651    ###############################################################################
652    
653  #  Set defaults here  #  Set defaults here
654  COMMANDL="$0 $@"  COMMANDL="$0 $@"
655    
# Line 445  LN= Line 658  LN=
658  S64=  S64=
659  KPP=  KPP=
660  FC=  FC=
661    CPP=
662  LINK=  LINK=
 # DEFINES="-DWORDLENGTH=4"  
663  DEFINES=  DEFINES=
664  PACKAGES=  PACKAGES=
665  ENABLE=  ENABLE=
# Line 463  FOPTIM= Line 676  FOPTIM=
676  CFLAGS=  CFLAGS=
677  KFLAGS1=  KFLAGS1=
678  KFLAGS2=  KFLAGS2=
679    #LDADD=
680  LIBS=  LIBS=
681  KPPFILES=  KPPFILES=
682  NOOPTFILES=  NOOPTFILES=
683  NOOPTFLAGS=  NOOPTFLAGS=
684    MPI=
685    MPIPATH=
686    
687  # DEFINES checked by test compilation  # DEFINES checked by test compilation
688  HAVE_SYSTEM=  HAVE_SYSTEM=
689  HAVE_FDATE=  HAVE_FDATE=
690  FC_NAMEMANGLE=  FC_NAMEMANGLE=
691  HAVE_CLOC=  HAVE_CLOC=
692    HAVE_NETCDF=
693    HAVE_ETIME=
694    
695  MODS=  MODS=
696  TOOLSDIR=  TOOLSDIR=
# Line 480  SOURCEDIRS= Line 698  SOURCEDIRS=
698  INCLUDEDIRS=  INCLUDEDIRS=
699  STANDARDDIRS="USE_THE_DEFAULT"  STANDARDDIRS="USE_THE_DEFAULT"
700    
701    G2ARGS=
702    BASH=
703  PWD=`pwd`  PWD=`pwd`
704  MAKE=make  MAKE=make
705  AWK=awk  AWK=awk
# Line 495  IEEE= Line 715  IEEE=
715  if test "x$MITGCM_IEEE" != x ; then  if test "x$MITGCM_IEEE" != x ; then
716      IEEE=$MITGCM_IEEE      IEEE=$MITGCM_IEEE
717  fi  fi
718    FS=
719    FS90=
720    
721  AUTODIFF_PKG_USED=f  AUTODIFF_PKG_USED=f
722  AD_OPTFILE=  AD_OPTFILE=
# Line 512  TAMC_EXTRA= Line 734  TAMC_EXTRA=
734    
735  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
736  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
737  gm_s2="FC IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS"
738    
739  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
740  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
741  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
742  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"
743  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
744  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE"  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
745    
746  #  The following are all related to adjoint/tangent-linear stuff  #  The following are all related to adjoint/tangent-linear stuff
747  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"  gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
# Line 548  for i in . $MODS ; do Line 770  for i in . $MODS ; do
770          break          break
771      fi      fi
772  done  done
773  echo -n "  getting local config information:  "  printf "  getting local config information:  "
774  if test -e $gm_local ; then  if test -e $gm_local ; then
775      echo "using $gm_local"      echo "using $gm_local"
776      . $gm_local      . $gm_local
# Line 572  fi Line 794  fi
794  ac_prev=  ac_prev=
795  for ac_option ; do  for ac_option ; do
796    
797        G2ARGS="$G2ARGS \"$ac_option\""
798    
799      # If the previous option needs an argument, assign it.      # If the previous option needs an argument, assign it.
800      if test -n "$ac_prev"; then      if test -n "$ac_prev"; then
801          eval "$ac_prev=\$ac_option"          eval "$ac_prev=\$ac_option"
# Line 613  for ac_option ; do Line 837  for ac_option ; do
837          -make=* | --make=* | -m=* | --m=*)          -make=* | --make=* | -m=* | --m=*)
838              MAKE=$ac_optarg ;;              MAKE=$ac_optarg ;;
839                    
840            -bash | --bash)
841                ac_prev=BASH ;;
842            -bash=* | --bash=*)
843                BASH=$ac_optarg ;;
844            
845            -makedepend | --makedepend | -md | --md)
846                ac_prev=MAKEDEPEND ;;
847            -makedepend=* | --makedepend=* | -md=* | --md=*)
848                MAKEDEPEND=$ac_optarg ;;
849            
850          -makefile | --makefile | -ma | --ma)          -makefile | --makefile | -ma | --ma)
851              ac_prev=MAKEFILE ;;              ac_prev=MAKEFILE ;;
852          -makefile=* | --makefile=* | -ma=* | --ma=*)          -makefile=* | --makefile=* | -ma=* | --ma=*)
# Line 660  for ac_option ; do Line 894  for ac_option ; do
894          -fc=* | --fc=*)          -fc=* | --fc=*)
895              FC=$ac_optarg ;;              FC=$ac_optarg ;;
896                    
897            -fs | --fs)
898                ac_prev=FS ;;
899            -fs=* | --fs=*)
900                FS=$ac_optarg ;;
901            
902            -fs90 | --fs90)
903                ac_prev=FS90 ;;
904            -fs90=* | --fs90=*)
905                FS90=$ac_optarg ;;
906            
907          -ieee | --ieee)          -ieee | --ieee)
908              IEEE=true ;;              IEEE=true ;;
909          -noieee | --noieee)          -noieee | --noieee)
910              IEEE= ;;              IEEE= ;;
911    
912            -mpi | --mpi)
913                MPI=true ;;
914            -mpi=* | --mpi=*)
915                MPIPATH=$ac_optarg
916                MPI=true ;;
917                    
918  #       -jam | --jam)  #       -jam | --jam)
919  #           JAM=1 ;;  #           JAM=1 ;;
# Line 716  if test "x${ROOTDIR}" = x ; then Line 966  if test "x${ROOTDIR}" = x ; then
966          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
967              if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then              if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
968                  ROOTDIR=$d                  ROOTDIR=$d
969                  echo -n "Warning:  ROOTDIR was not specified but there appears to be"                  printf "Warning:  ROOTDIR was not specified but there appears to be"
970                  echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."                  echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
971                  break                  break
972              fi              fi
# Line 750  if test "x$OPTFILE" != xNONE ; then Line 1000  if test "x$OPTFILE" != xNONE ; then
1000          . "$OPTFILE"          . "$OPTFILE"
1001          RETVAL=$?          RETVAL=$?
1002          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
1003              echo -n "Error: failed to source OPTFILE \"$OPTFILE\""              printf "Error: failed to source OPTFILE \"$OPTFILE\""
1004              echo "--please check that variable syntax is bash-compatible"              echo "--please check that variable syntax is bash-compatible"
1005              exit 1              exit 1
1006          fi          fi
# Line 763  if test "x$OPTFILE" != xNONE ; then Line 1013  if test "x$OPTFILE" != xNONE ; then
1013      fi      fi
1014  fi  fi
1015    
1016    #  Check for broken systems that cannot correctly distinguish *.F and *.f files
1017    # check_for_broken_Ff
1018    
1019  echo "  getting AD_OPTFILE information:  "  echo "  getting AD_OPTFILE information:  "
1020  if test "x${AD_OPTFILE}" = x ; then  if test "x${AD_OPTFILE}" = x ; then
1021      if test "x$MITGCM_AD_OF" = x ; then      if test "x$MITGCM_AD_OF" = x ; then
# Line 777  if test "x${AD_OPTFILE}" != xNONE ; then Line 1030  if test "x${AD_OPTFILE}" != xNONE ; then
1030          . "$AD_OPTFILE"          . "$AD_OPTFILE"
1031          RETVAL=$?          RETVAL=$?
1032          if test "x$RETVAL" != x0 ; then          if test "x$RETVAL" != x0 ; then
1033              echo -n "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""              printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1034              echo "--please check that variable syntax is bash-compatible"              echo "--please check that variable syntax is bash-compatible"
1035              exit 1              exit 1
1036          fi          fi
# Line 792  fi Line 1045  fi
1045    
1046  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,  #  Check that FC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
1047  #  either set defaults or complain and abort!  #  either set defaults or complain and abort!
1048    if test ! "x$BASH" = x ; then
1049        # add a trailing space so that it works within the Makefile syntax (see below)
1050        BASH="$BASH "
1051    fi
1052  if test "x$FC" = x ; then  if test "x$FC" = x ; then
1053      cat <<EOF 1>&2      cat <<EOF 1>&2
1054    
# Line 805  fi Line 1062  fi
1062  if test "x$LINK" = x ; then  if test "x$LINK" = x ; then
1063      LINK=$FC      LINK=$FC
1064  fi  fi
 if test "x$CPP" = x ; then  
     CPP="cpp"  
 fi  
1065  if test "x$MAKE" = x ; then  if test "x$MAKE" = x ; then
1066      MAKE="make"      MAKE="make"
1067  fi  fi
1068    if test "x$CPP" = x ; then
1069        CPP=cpp
1070    fi
1071    #EH3 === UGLY ===
1072    #  The following is an ugly little hack to check for $CPP in /lib/ and
1073    #  it should eventually be replaced with a more general function that
1074    #  searches a combo of the user's path and a list of "usual suspects"
1075    #  to find the correct location for binaries such as $CPP.
1076    for i in " " "/lib/" ; do
1077        echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1078    done
1079    #EH3 === UGLY ===
1080  echo "#define A a" | $CPP > test_cpp 2>&1  echo "#define A a" | $CPP > test_cpp 2>&1
1081  RETVAL=$?  RETVAL=$?
1082  if test "x$RETVAL" != x0 ; then  if test "x$RETVAL" != x0 ; then
# Line 827  EOF Line 1093  EOF
1093  else  else
1094      rm -f test_cpp      rm -f test_cpp
1095  fi  fi
1096  if test "x$MAKEDEPEND" = x ; then  look_for_makedepend
     MAKEDEPEND=makedepend  
 fi  
1097  if test "x$LN" = x ; then  if test "x$LN" = x ; then
1098      LN="ln -s"      LN="ln -s"
1099  fi  fi
# Line 847  EOF Line 1111  EOF
1111  fi  fi
1112  rm -f genmake_test_ln genmake_tlink  rm -f genmake_test_ln genmake_tlink
1113    
1114    #  Check for broken *.F/*.f handling and fix if possible
1115    check_for_broken_Ff
1116    
1117    if test ! "x$MPI" = x ; then
1118          echo "  Turning on MPI cpp macros"
1119          DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1120    fi
1121    
1122  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
1123  echo -n "  Do we have the system() command using $FC...  "  printf "  Do we have the system() command using $FC...  "
1124  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.f <<EOF
1125        program hello        program hello
1126        call system('echo hi')        call system('echo hi')
# Line 867  else Line 1138  else
1138  fi  fi
1139  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1140    
1141  echo -n "  Do we have the fdate() command using $FC...  "  printf "  Do we have the fdate() command using $FC...  "
1142  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.f <<EOF
1143        program hello        program hello
1144        CHARACTER(128) string        CHARACTER(128) string
# Line 888  else Line 1159  else
1159  fi  fi
1160  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1161    
1162  echo -n "  Can we call simple C routines (here, \"cloc()\") using $FC...  "  printf "  Do we have the etime() command using $FC...  "
1163    cat > genmake_tcomp.f <<EOF
1164          program hello
1165          REAL*4 ACTUAL, TARRAY(2)
1166          EXTERNAL ETIME
1167          REAL*4 ETIME
1168          actual = etime( tarray )
1169          print *, tarray
1170          end
1171    EOF
1172    $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1
1173    RETVAL=$?
1174    if test "x$RETVAL" = x0 ; then
1175        HAVE_ETIME=t
1176        DEFINES="$DEFINES -DHAVE_ETIME"
1177        echo "yes"
1178    else
1179        HAVE_ETIME=
1180        echo "no"
1181    fi
1182    rm -f genmake_tcomp*
1183    
1184    printf "  Can we call simple C routines (here, \"cloc()\") using $FC...  "
1185  check_HAVE_CLOC  check_HAVE_CLOC
1186  if test "x$HAVE_CLOC" != x ; then  if test "x$HAVE_CLOC" != x ; then
1187      echo "yes"      echo "yes"
# Line 897  else Line 1190  else
1190  fi  fi
1191  rm -f genmake_t*  rm -f genmake_t*
1192    
1193    printf "  Can we create NetCDF-enabled binaries...  "
1194    check_netcdf_libs
1195    if test "x$HAVE_NETCDF" != x ; then
1196        echo "yes"
1197    else
1198        echo "no"
1199    fi
1200    
1201    
1202  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
1203  echo -n "  Adding MODS directories:  "  printf "  Adding MODS directories:  "
1204  for d in $MODS ; do  for d in $MODS ; do
1205      if test ! -d $d ; then      if test ! -d $d ; then
1206          echo          echo
1207          echo "Error: MODS directory \"$d\" not found!"          echo "Error: MODS directory \"$d\" not found!"
1208          exit 1          exit 1
1209      else      else
1210          echo -n " $d"          printf " $d"
1211          SOURCEDIRS="$SOURCEDIRS $d"          SOURCEDIRS="$SOURCEDIRS $d"
1212          INCLUDEDIRS="$INCLUDEDIRS $d"          INCLUDEDIRS="$INCLUDEDIRS $d"
1213      fi      fi
# Line 936  if test "x${TOOLSDIR}" = x ; then Line 1237  if test "x${TOOLSDIR}" = x ; then
1237      TOOLSDIR="$ROOTDIR/tools"      TOOLSDIR="$ROOTDIR/tools"
1238  fi  fi
1239  if test ! -d ${TOOLSDIR} ; then  if test ! -d ${TOOLSDIR} ; then
1240      echo "Error: the specified $TOOLSDIR (\"$TOOLSDIR\") does not exist!"      echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1241      exit 1      exit 1
1242  fi  fi
1243  if test "x$S64" = x ; then  if test "x$S64" = x ; then
# Line 957  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1258  if test -r $ROOTDIR"/eesupp/src/Makefile
1258          rm -f make_eesupp.errors          rm -f make_eesupp.errors
1259      else      else
1260          echo "Error: problem encountered while building source files in eesupp:"          echo "Error: problem encountered while building source files in eesupp:"
1261          cat make_eesupp.errors          cat make_eesupp.errors 1>&2
1262          exit 1          exit 1
1263      fi      fi
1264  fi  fi
# Line 970  if test -r $ROOTDIR"/pkg/exch2/Makefile" Line 1271  if test -r $ROOTDIR"/pkg/exch2/Makefile"
1271      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
1272          rm -f make_exch2.errors          rm -f make_exch2.errors
1273      else      else
1274          echo "Error: problem encountered while building source files in exch2:"        cat make_exch2.errors          echo "Error: problem encountered while building source files in exch2:"
1275            cat make_exch2.errors 1>&2
1276          exit 1          exit 1
1277      fi      fi
1278  fi  fi
# Line 1030  else Line 1332  else
1332          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`          def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1333          RETVAL=$?          RETVAL=$?
1334          if test "x${RETVAL}" != x0 ; then          if test "x${RETVAL}" != x0 ; then
1335              echo -n "Error: can't parse default package list "              printf "Error: can't parse default package list "
1336              echo "-- please check PDEFAULT=\"$PDEFAULT\""              echo "-- please check PDEFAULT=\"$PDEFAULT\""
1337              exit 1              exit 1
1338          fi          fi
# Line 1038  else Line 1340  else
1340              PACKAGES="$PACKAGES $i"              PACKAGES="$PACKAGES $i"
1341          done          done
1342          echo "    before group expansion packages are: $PACKAGES"          echo "    before group expansion packages are: $PACKAGES"
1343          expand_pkg_groups          while ! expand_pkg_groups; do echo > /dev/null; done
1344          echo "    after group expansion packages are:  $PACKAGES"          echo "    after group expansion packages are:  $PACKAGES"
1345      fi      fi
1346  fi  fi
1347    
1348  echo "  applying DISABLE settings"  echo "  applying DISABLE settings"
1349    for i in $PACKAGES ; do
1350        echo $i >> ./.tmp_pack
1351    done
1352    for i in `grep  "-" ./.tmp_pack` ; do
1353        j=`echo $i | sed 's/[-]//'`
1354        DISABLE="$DISABLE $j"
1355    done
1356  pack=  pack=
1357  for p in $PACKAGES ; do  for p in $PACKAGES ; do
1358      addit="t"      addit="t"
# Line 1060  PACKAGES="$pack" Line 1369  PACKAGES="$pack"
1369  echo "  applying ENABLE settings"  echo "  applying ENABLE settings"
1370  echo "" > ./.tmp_pack  echo "" > ./.tmp_pack
1371  PACKAGES="$PACKAGES $ENABLE"  PACKAGES="$PACKAGES $ENABLE"
1372    # Test if each explicitly referenced package exists
1373  for i in $PACKAGES ; do  for i in $PACKAGES ; do
1374      if test ! -d "$ROOTDIR/pkg/$i" ; then      j=`echo $i | sed 's/[-+]//'`
1375        if test ! -d "$ROOTDIR/pkg/$j" ; then
1376          echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""          echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1377          exit 1          exit 1
1378      fi      fi
1379      echo $i >> ./.tmp_pack      echo $i >> ./.tmp_pack
1380  done  done
 pack=`cat ./.tmp_pack | sort | uniq`  
 rm -f ./.tmp_pack  
1381  PACKAGES=  PACKAGES=
1382  for i in $pack ; do  for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1383      PACKAGES="$PACKAGES $i"      PACKAGES="$PACKAGES $i"
1384  done  done
1385    rm -f ./.tmp_pack
1386  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1387    
1388  echo "  applying package dependency rules"  echo "  applying package dependency rules"
# Line 1158  for i in $PACKAGES ; do Line 1468  for i in $PACKAGES ; do
1468      fi      fi
1469  done  done
1470    
1471    #  Build MNC templates and check for ability to build and use NetCDF
1472    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1473    RETVAL=$?
1474    if test "x$RETVAL" = x0 ; then
1475        ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1
1476        RETVAL=$?
1477        if test "x${RETVAL}" = x0 ; then
1478            rm -f make_mnc.errors
1479        else
1480            echo "Error: problem encountered while building source files in pkg/mnc:"
1481            cat make_mnc.errors 1>&2
1482            exit 1
1483        fi
1484        if test "x$HAVE_NETCDF" != xt ; then
1485            cat <<EOF
1486    
1487    WARNING: the "mnc" package has been enabled but tests failed to
1488      compile and/or execute NetCDF applications.  Please check that:
1489    
1490      1) NetCDF is installed for your compiler and
1491      2) the LIBS variable (within the 'optfile") specifies the correct
1492           NetCDF library to link against.
1493      
1494    EOF
1495        fi
1496    fi
1497    
1498  # Create a list of #define and #undef to enable/disable packages  # Create a list of #define and #undef to enable/disable packages
1499  PACKAGES_DOT_H=PACKAGES_CONFIG.h  PACKAGES_DOT_H=PACKAGES_CONFIG.h
# Line 1270  for i in $SOURCEDIRS ; do Line 1606  for i in $SOURCEDIRS ; do
1606      done      done
1607  done  done
1608    
1609    
1610  echo  echo
1611  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
1612  echo "  setting INCLUDES"  echo "  setting INCLUDES"
# Line 1286  rm -rf .links.tmp Line 1623  rm -rf .links.tmp
1623  mkdir .links.tmp  mkdir .links.tmp
1624  echo "# This section creates symbolic links" > srclinks.tmp  echo "# This section creates symbolic links" > srclinks.tmp
1625  echo "" >> srclinks.tmp  echo "" >> srclinks.tmp
1626  echo -n 'SRCFILES = '    > srclist.inc  printf 'SRCFILES = '    > srclist.inc
1627  echo -n 'CSRCFILES = '   > csrclist.inc  printf 'CSRCFILES = '   > csrclist.inc
1628  echo -n 'F90SRCFILES = ' > f90srclist.inc  printf 'F90SRCFILES = ' > f90srclist.inc
1629  echo -n 'HEADERFILES = ' > hlist.inc  printf 'HEADERFILES = ' > hlist.inc
1630  echo -n 'AD_FLOW_FILES = ' > ad_flow_files.inc  printf 'AD_FLOW_FILES = ' > ad_flow_files.inc
1631  alldirs="$SOURCEDIRS $INCLUDEDIRS ."  alldirs="$SOURCEDIRS $INCLUDEDIRS ."
1632  for d in $alldirs ; do  for d in $alldirs ; do
1633      deplist=      deplist=
# Line 1315  for d in $alldirs ; do Line 1652  for d in $alldirs ; do
1652                  case $extn in                  case $extn in
1653                      F)                      F)
1654                          echo    " \\"  >> srclist.inc                          echo    " \\"  >> srclist.inc
1655                          echo -n " $sf" >> srclist.inc                          printf " $sf" >> srclist.inc
1656                          ;;                          ;;
1657                      F90)                      F90)
1658                          echo    " \\"  >> f90srclist.inc                          echo    " \\"  >> f90srclist.inc
1659                          echo -n " $sf" >> f90srclist.inc                          printf " $sf" >> f90srclist.inc
1660                          ;;                          ;;
1661                      c)                      c)
1662                          echo    " \\"  >> csrclist.inc                          echo    " \\"  >> csrclist.inc
1663                          echo -n " $sf" >> csrclist.inc                          printf " $sf" >> csrclist.inc
1664                          ;;                          ;;
1665                      h)                      h)
1666                          echo    " \\"  >> hlist.inc                          echo    " \\"  >> hlist.inc
1667                          echo -n " $sf" >> hlist.inc                          printf " $sf" >> hlist.inc
1668                          ;;                          ;;
1669                      flow)                      flow)
1670                          echo    " \\"  >> ad_flow_files.inc                          echo    " \\"  >> ad_flow_files.inc
1671                          echo -n " $sf" >> ad_flow_files.inc                          printf " $sf" >> ad_flow_files.inc
1672                          ;;                          ;;
1673                  esac                  esac
1674              fi              fi
# Line 1360  echo "#    $MACHINE" >> $MAKEFILE Line 1697  echo "#    $MACHINE" >> $MAKEFILE
1697  echo "# This makefile was generated automatically on" >> $MAKEFILE  echo "# This makefile was generated automatically on" >> $MAKEFILE
1698  echo "#    $THISDATE" >> $MAKEFILE  echo "#    $THISDATE" >> $MAKEFILE
1699  echo "# by the command:" >> $MAKEFILE  echo "# by the command:" >> $MAKEFILE
1700  echo "#    $0 $@" >> $MAKEFILE  echo "#    $0 $G2ARGS" >> $MAKEFILE
1701  echo "# executed by:" >> $MAKEFILE  echo "# executed by:" >> $MAKEFILE
1702  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE
1703    
# Line 1428  FC = ${FC} Line 1765  FC = ${FC}
1765  # Fortran compiler  # Fortran compiler
1766  F90C = ${F90C}  F90C = ${F90C}
1767  # Link editor  # Link editor
1768  LINK = ${LINK}  LINK = ${LINK} ${LDADD}
1769    
1770  # Defines for CPP  # Defines for CPP
1771  DEFINES = ${DEFINES}  DEFINES = ${DEFINES}
# Line 1460  cat csrclist.inc      >> $MAKEFILE Line 1797  cat csrclist.inc      >> $MAKEFILE
1797  cat f90srclist.inc    >> $MAKEFILE  cat f90srclist.inc    >> $MAKEFILE
1798  cat hlist.inc         >> $MAKEFILE  cat hlist.inc         >> $MAKEFILE
1799  cat ad_flow_files.inc >> $MAKEFILE  cat ad_flow_files.inc >> $MAKEFILE
1800  echo               >> $MAKEFILE  echo >> $MAKEFILE
1801  echo 'F77FILES =  $(SRCFILES:.F=.f)'                                           >> $MAKEFILE  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE
1802  echo 'F90FILES =  $(F90SRCFILES:.F90=.f90)'                                    >> $MAKEFILE  echo 'F90FILES =  $(F90SRCFILES:.F=.'$FS90')' >> $MAKEFILE
1803  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
1804    echo >> $MAKEFILE
1805    echo '.SUFFIXES:' >> $MAKEFILE
1806    echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE
1807  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc  rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
1808  rm -f ad_flow_files.inc  rm -f ad_flow_files.inc
1809    
1810  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
1811    
 .SUFFIXES:  
 .SUFFIXES: .o .f .p .F .c .F90 .f90  
   
1812  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
1813  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)
1814          @echo Creating \$@ ...          @echo Creating \$@ ...
1815          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
1816  depend:  depend:
1817          @make links          @make links
1818          \$(MAKEDEPEND) -o .f \$(DEFINES) \$(INCLUDES) \$(SRCFILES)          \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
1819          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
1820            -rm -f makedepend.out
1821    
1822  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
1823    
# Line 1491  output.txt: \$(EXECUTABLE) Line 1828  output.txt: \$(EXECUTABLE)
1828          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
1829    
1830  clean:  clean:
1831          -rm -rf *.o *.f *.p *.f90 *.mod ${RMFILES} work.{pc,pcl} *.template          -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
1832  Clean:  Clean:
1833          @make clean          @make clean
1834          @make cleanlinks          @make cleanlinks
# Line 1502  CLEAN: Line 1839  CLEAN:
1839          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
1840          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
1841          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
1842          -rm -f \$(EXECUTABLE) output.txt          -rm -f \$(EXECUTABLE) output.txt STD*
1843    
1844  #eh3 Makefile: makefile  #eh3 Makefile: makefile
1845  makefile:  makefile:
1846          $THIS_SCRIPT $@          $THIS_SCRIPT $G2ARGS
1847  cleanlinks:  cleanlinks:
1848          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
1849    
1850  # Special targets ($SPECIAL_FILES) which are create by make  # Special targets ($SPECIAL_FILES) which are create by make
1851  ${PACKAGES_DOT_H}:  ${PACKAGES_DOT_H}:
1852          @echo Creating \$@ ...          @echo Creating \$@ ...
1853          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
1854  AD_CONFIG.h:  AD_CONFIG.h:
1855          @echo Creating \$@ ...          @echo Creating \$@ ...
1856          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
1857  FC_NAMEMANGLE.h:  FC_NAMEMANGLE.h:
1858          @echo Creating \$@ ...          @echo Creating \$@ ...
1859          echo "$FC_NAMEMANGLE" > \$@          echo "$FC_NAMEMANGLE" > \$@
1860    
1861  # The normal chain of rules is (  .F - .f - .o  )  # The normal chain of rules is (  .F - .$FS - .o  )
1862  .F.f:  
1863    %.o : %.F
1864    
1865    .F.$FS:
1866          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
1867  .f.o:  .$FS.o:
1868          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
1869  .F90.f90:  .F90.$FS90:
1870          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
1871  .f90.o:  .$FS90.o:
1872          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
1873  .c.o:  .c.o:
1874          \$(CC) \$(CFLAGS) -c \$<          \$(CC) \$(CFLAGS) -c \$<
1875    
1876  # Special exceptions that use the ( .F - .p - .f - .o ) rule-chain  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
1877  .F.p:  .F.p:
1878          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
1879  .p.f:  .p.$FS:
1880          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
1881    
1882  #=========================================  #=========================================
# Line 1563  done Line 1903  done
1903    
1904  echo "  Add the source list for AD code generation"  echo "  Add the source list for AD code generation"
1905  echo >> $MAKEFILE  echo >> $MAKEFILE
1906  echo -n "AD_FILES = " >> $MAKEFILE  printf "AD_FILES = " >> $MAKEFILE
1907  AD_FILES=`cat ad_files`  AD_FILES=`cat ad_files`
1908  for i in $AD_FILES ; do  for i in $AD_FILES ; do
1909      echo    " \\" >> $MAKEFILE      echo    " \\" >> $MAKEFILE
1910      echo -n " $i" >> $MAKEFILE      printf " $i" >> $MAKEFILE
1911  done  done
1912  echo >> $MAKEFILE  echo >> $MAKEFILE
1913  rm -f ad_files  rm -f ad_files
# Line 1580  adtaf: ad_taf_output.f Line 1920  adtaf: ad_taf_output.f
1920  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.f
1921    
1922  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1923          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
1924          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
1925          -rm -f ad_config.template          -rm -f ad_config.template
1926          @make \$(F77FILES)          @make \$(F77FILES)
# Line 1612  ftltaf: ftl_taf_output.f Line 1952  ftltaf: ftl_taf_output.f
1952  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.f
1953    
1954  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)
1955          @\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
1956          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
1957          -rm -f ftl_config.template          -rm -f ftl_config.template
1958          @make \$(F77FILES)          @make \$(F77FILES)
# Line 1661  for i in $KPPFILES ; do Line 2001  for i in $KPPFILES ; do
2001      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
2002          echo "Error: unable to add file \"$i\" to the exceptions list"          echo "Error: unable to add file \"$i\" to the exceptions list"
2003      fi      fi
2004      echo "$base.f: $base.p" >> $MAKEFILE      echo "$base.$FS: $base.p" >> $MAKEFILE
2005  done  done
2006    
2007  echo "  Making list of NOOPTFILES"  echo "  Making list of NOOPTFILES"
# Line 1671  for i in $NOOPTFILES ; do Line 2011  for i in $NOOPTFILES ; do
2011      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
2012          echo "Error: unable to add file \"$i\" to the exceptions list"          echo "Error: unable to add file \"$i\" to the exceptions list"
2013      fi      fi
2014      echo "$base.o: $base.f" >> $MAKEFILE      echo "$base.o: $base.$FS" >> $MAKEFILE
2015      printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE      printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
2016  done  done
2017    
# Line 1685  printf "\n\n# DO NOT DELETE\n" >> $MAKEF Line 2025  printf "\n\n# DO NOT DELETE\n" >> $MAKEF
2025  printf "\n===  Done  ===\n"  printf "\n===  Done  ===\n"
2026    
2027  # Create special header files  # Create special header files
2028  $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"  $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
2029  if test ! -f $PACKAGES_DOT_H ; then  if test ! -f $PACKAGES_DOT_H ; then
2030      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H      mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2031  else  else
2032      cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H      cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
2033      RETVAL=$?      RETVAL=$?
2034      if test "x$RETVAL" = x0 ; then      if test "x$RETVAL" = x0 ; then
2035          rm -f $PACKAGES_DOT_H".tmp"          rm -f $PACKAGES_DOT_H".tmp"
# Line 1699  else Line 2039  else
2039      fi      fi
2040  fi  fi
2041  if test ! -f AD_CONFIG.h ; then  if test ! -f AD_CONFIG.h ; then
2042      $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h      $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
2043  fi  fi
2044    
2045    
2046  #  Write the "state" for future records  #  Write the "state" for future records
2047  if test "x$DUMPSTATE" != xf ; then  if test "x$DUMPSTATE" != xf ; then
2048      echo -n "" > genmake_state      printf "" > genmake_state
2049      for i in $gm_state ; do      for i in $gm_state ; do
2050          t1="t2=\$$i"          t1="t2=\$$i"
2051          eval $t1          eval $t1

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