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revision 1.144 by edhill, Sat Mar 11 02:53:48 2006 UTC revision 1.154 by edhill, Sat Aug 12 03:47:36 2006 UTC
# Line 13  Line 13 
13  test_for_package_in_cpp_options() {  test_for_package_in_cpp_options() {
14      cpp_options=$1      cpp_options=$1
15      pkg=$2      pkg=$2
16      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
17      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
18      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
19      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
20        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
21        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
22        test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
23        test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
24  }  }
25    
26  # Search for particular CPP #cmds associated with MPI  # Search for particular CPP #cmds associated with MPI
27  # usage: test_for_mpi_in_cpp_eeoptions CPP_file  # usage: test_for_mpi_in_cpp_eeoptions CPP_file
28  test_for_mpi_in_cpp_eeoptions() {  test_for_mpi_in_cpp_eeoptions() {
29      cpp_options=$1      cpp_options=$1
30      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
31      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
32      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
33      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
34        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
35        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
36        test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
37        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
38  }  }
39    
40  # Search for particular string in a file. Return 1 if detected, 0 if not  # Search for particular string in a file. Return 1 if detected, 0 if not
# Line 39  test_for_string_in_file() { Line 47  test_for_string_in_file() {
47      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
48          printf "Error: In $file there is an illegal line: "          printf "Error: In $file there is an illegal line: "
49          grep -i "$strng" $file          grep -i "$strng" $file
50          return 1          exit 99
51      fi      fi
52      return 0      return 0
53  }  }
# Line 579  Usage: "$0" [OPTIONS] Line 587  Usage: "$0" [OPTIONS]
587      -ts | --ts      -ts | --ts
588            Produce timing information per timestep            Produce timing information per timestep
589      -papis | --papis      -papis | --papis
590            Produce summary MFlop/s with PAPI per timestep            Produce summary MFlop/s (and IPC) with PAPI per timestep
591        -pcls | --pcls
592              Produce summary MFlop/s etc. with PCL per timestep
593      -foolad | --foolad      -foolad | --foolad
594            Fool the AD code generator            Fool the AD code generator
595      -papi | --papi      -papi | --papi
596            Performance analysis with PAPI            Performance analysis with PAPI
597        -pcl | --pcl
598              Performance analysis with PCL
599      -hpmt | --hpmt      -hpmt | --hpmt
600            Performance analysis with the HPM Toolkit            Performance analysis with the HPM Toolkit
601    
# Line 755  EOF Line 767  EOF
767    
768    
769  check_HAVE_SIGREG()  {  check_HAVE_SIGREG()  {
770        if test ! "x$HAVE_SIGREG" = x ; then
771            return
772        fi
773      get_fortran_c_namemangling      get_fortran_c_namemangling
774      cat <<EOF > genmake_tc_1.c      cat <<EOF > genmake_tc_1.c
775  $FC_NAMEMANGLE  $FC_NAMEMANGLE
# Line 812  EOF Line 827  EOF
827    
828    
829  check_HAVE_SETRLSTK()  {  check_HAVE_SETRLSTK()  {
830        if test "x$HAVE_SETRLSTK" = xt ; then
831            DEFINES="$DEFINES -DHAVE_SETRLSTK"
832            return
833        fi  
834        if test ! "x$HAVE_SETRLSTK" = x ; then
835            return
836        fi
837      get_fortran_c_namemangling      get_fortran_c_namemangling
838      cat <<EOF > genmake_tc_1.c      cat <<EOF > genmake_tc_1.c
839  $FC_NAMEMANGLE  $FC_NAMEMANGLE
# Line 922  EOF Line 944  EOF
944      cat genmake_tnc.F >> genmake_tnc.log      cat genmake_tnc.F >> genmake_tnc.log
945      echo "===  genmake_tnc.F  ===" >> genmake_tnc.log      echo "===  genmake_tnc.F  ===" >> genmake_tnc.log
946      RET_CPP=f      RET_CPP=f
947      COMM="$CPP $DEFINES $INCLUDES genmake_tnc.F"      COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
948      echo "$COMM" >> genmake_tnc.log      echo "$COMM" >> genmake_tnc.log
949      $COMM > genmake_tnc.$FS 2>/dev/null  &&  RET_CPP=t      $COMM > genmake_tnc.$FS 2>/dev/null  &&  RET_CPP=t
950      if test "x$RET_CPP" = xf ; then      if test "x$RET_CPP" = xf ; then
# Line 932  EOF Line 954  EOF
954              >> genmake_tnc.log              >> genmake_tnc.log
955      fi      fi
956      echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS  \ " >> genmake_tnc.log      echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS  \ " >> genmake_tnc.log
957      echo "  &&  $LINK -o genmake_tnc.o $LIBS" >> genmake_tnc.log      echo "  &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
958      $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \      $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
959          &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1          &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
960      RET_COMPILE=$?      RET_COMPILE=$?
961      cat genmake_tnc.log >> genmake_warnings      cat genmake_tnc.log >> genmake_warnings
962    
# Line 950  EOF Line 972  EOF
972      else      else
973          # try again with "-lnetcdf" added to the libs          # try again with "-lnetcdf" added to the libs
974          echo "try again with added '-lnetcdf'" > genmake_tnc.log          echo "try again with added '-lnetcdf'" > genmake_tnc.log
975          echo "$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS \ " >> genmake_tnc.log          echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
976          echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log          echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
977          echo " &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log          echo " &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
978          $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null  \          cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null  \
979              &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \              &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
980              &&  $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1              &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
981          RET_COMPILE=$?          RET_COMPILE=$?
982          cat genmake_tnc.log >> genmake_warnings          cat genmake_tnc.log >> genmake_warnings
983          if test "x$RET_COMPILE" = x0 ; then          if test "x$RET_COMPILE" = x0 ; then
# Line 1008  MPI= Line 1030  MPI=
1030  MPIPATH=  MPIPATH=
1031  TS=  TS=
1032  PAPIS=  PAPIS=
1033    PCLS=
1034  FOOLAD=  FOOLAD=
1035  PAPI=  PAPI=
1036    PCL=
1037  HPMT=  HPMT=
1038  GSL=  GSL=
1039  HAVE_TEST_L=  HAVE_TEST_L=
# Line 1019  HAVE_SYSTEM= Line 1043  HAVE_SYSTEM=
1043  HAVE_FDATE=  HAVE_FDATE=
1044  FC_NAMEMANGLE=  FC_NAMEMANGLE=
1045  HAVE_CLOC=  HAVE_CLOC=
1046  HAVE_SETRLSTK=  # HAVE_SETRLSTK=
1047  HAVE_STAT=  HAVE_STAT=
1048  HAVE_NETCDF=  HAVE_NETCDF=
1049  HAVE_ETIME=  HAVE_ETIME=
# Line 1070  TAMC_EXTRA= Line 1094  TAMC_EXTRA=
1094    
1095  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
1096  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1097  gm_s2="FC CPP IEEE TS PAPIS PAPI HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"
1098    
1099  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
1100  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
# Line 1254  for ac_option in "$@" ; do Line 1278  for ac_option in "$@" ; do
1278              TS=true ;;              TS=true ;;
1279          -papis | --papis)          -papis | --papis)
1280              PAPIS=true ;;              PAPIS=true ;;
1281            -pcls | --pcls)
1282                PCLS=true ;;
1283          -foolad | --foolad)          -foolad | --foolad)
1284              FOOLAD=true ;;              FOOLAD=true ;;
1285          -papi | --papi)          -papi | --papi)
1286              PAPI=true ;;              PAPI=true ;;
1287            -pcl | --pcl)
1288                PCL=true ;;
1289          -hpmt | --hpmt)          -hpmt | --hpmt)
1290              HPMT=true ;;              HPMT=true ;;
1291    
# Line 1324  fi Line 1352  fi
1352  #  Find the MITgcm ${ROOTDIR}  #  Find the MITgcm ${ROOTDIR}
1353  if test "x${ROOTDIR}" = x ; then  if test "x${ROOTDIR}" = x ; then
1354      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1355      if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then      if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1356          ROOTDIR=".."          ROOTDIR=".."
1357      else      else
1358          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
# Line 1526  if test ! "x$PAPIS" = x ; then Line 1554  if test ! "x$PAPIS" = x ; then
1554        INCLUDES="$INCLUDES $PAPIINC"        INCLUDES="$INCLUDES $PAPIINC"
1555        LIBS="$LIBS $PAPILIB"        LIBS="$LIBS $PAPILIB"
1556  fi  fi
1557    if test ! "x$PCLS" = x ; then
1558          echo "  Turning on PCL counter summary per timestep"
1559          echo "  Please make sure PCLINC, PCLLIB are defined"
1560          if test ! "x$FOOLAD" = x ; then
1561                DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1562          else
1563                DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1564          fi
1565          INCLUDES="$INCLUDES $PCLINC"
1566          LIBS="$LIBS $PCLLIB"
1567    fi
1568  if test ! "x$PAPI" = x ; then  if test ! "x$PAPI" = x ; then
1569        if test ! "x$PAPIS" = x ; then        if test ! "x$PAPIS" = x ; then
1570            echo "  PAPI performance analysis and flop summary per timestep cannot co-exist!"            echo "  PAPI performance analysis and flop summary per timestep cannot co-exist!"
# Line 1538  if test ! "x$PAPI" = x ; then Line 1577  if test ! "x$PAPI" = x ; then
1577            LIBS="$LIBS $PAPILIB"            LIBS="$LIBS $PAPILIB"
1578        fi        fi
1579  fi  fi
1580    if test ! "x$PCL" = x ; then
1581          if test ! "x$PCLS" = x ; then
1582              echo "  PCL performance analysis and flop summary per timestep cannot co-exist!"
1583              echo "  Sticking with PCL flop summary per timestep!"
1584          else
1585              echo "  Turning on performance analysis with PCL"
1586              echo "  Please make sure PCLINC, PCLLIB are defined"
1587              DEFINES="$DEFINES -DUSE_PCL"
1588              INCLUDES="$INCLUDES $PCLINC"
1589              LIBS="$LIBS $PCLLIB"
1590          fi
1591    fi
1592  if test ! "x$HPMT" = x ; then  if test ! "x$HPMT" = x ; then
1593        if test ! "x$PAPI" = x ; then        if test ! "x$PAPI" = x ; then
1594            echo "  PAPI and the HPM Toolkit cannot co-exist!"            echo "  PAPI and the HPM Toolkit cannot co-exist!"
1595            echo "  Sticking with PAPI!"            echo "  Sticking with PAPI!"
1596          else if test ! "x$PCL" = x ; then
1597              echo "  PCL and the HPM Toolkit cannot co-exist!"
1598              echo "  Sticking with PCL!"
1599        else        else
1600            echo "  Turning on performance analysis with the HPM Toolkit"            echo "  Turning on performance analysis with the HPM Toolkit"
1601            echo "  Please make sure HPMTINC, HPMTLIB are defined"            echo "  Please make sure HPMTINC, HPMTLIB are defined"
# Line 1549  if test ! "x$HPMT" = x ; then Line 1603  if test ! "x$HPMT" = x ; then
1603            INCLUDES="$INCLUDES $HPMTINC"            INCLUDES="$INCLUDES $HPMTINC"
1604            LIBS="$LIBS $HPMTLIB"            LIBS="$LIBS $HPMTLIB"
1605        fi        fi
1606          fi
1607  fi  fi
1608  if test ! "x$GSL" = x ; then  if test ! "x$GSL" = x ; then
1609        echo "  Turning on use of GSL to control floating point calculations"        echo "  Turning on use of GSL to control floating point calculations"
# Line 1636  rm -f genmake_t* Line 1691  rm -f genmake_t*
1691    
1692  printf "  Can we unlimit the stack size using $FC...  "  printf "  Can we unlimit the stack size using $FC...  "
1693  check_HAVE_SETRLSTK  check_HAVE_SETRLSTK
1694  if test "x$HAVE_SETRLSTK" != x ; then  if test "x$HAVE_SETRLSTK" = xt ; then
1695      echo "yes"      echo "yes"
1696  else  else
1697      echo "no"      echo "no"
# Line 1645  rm -f genmake_t* Line 1700  rm -f genmake_t*
1700    
1701  printf "  Can we register a signal handler using $FC...  "  printf "  Can we register a signal handler using $FC...  "
1702  check_HAVE_SIGREG  check_HAVE_SIGREG
1703  if test "x$HAVE_SIGREG" != x ; then  if test "x$HAVE_SIGREG" = xt ; then
1704      echo "yes"      echo "yes"
1705  else  else
1706      echo "no"      echo "no"
# Line 1763  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1818  if test -r $ROOTDIR"/eesupp/src/Makefile
1818      fi      fi
1819  fi  fi
1820    
1821  #same for exch2  #same for pkg/exch2 and pkg/regrid
1822  if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then  for pdir in exch2 regrid ; do
1823      echo "  Making source files in exch2 from  templates"      if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1824      ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1          echo "  Making source files in pkg/${pdir} from templates"
1825      RETVAL=$?          ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1
1826      if test "x${RETVAL}" = x0 ; then          RETVAL=$?
1827          rm -f make_exch2.errors          if test "x${RETVAL}" = x0 ; then
1828      else              rm -f make_${pdir}.errors
1829          echo "Error: problem encountered while building source files in exch2:"          else
1830          cat make_exch2.errors 1>&2              echo "Error: problem encountered while building source files in pkg/${pdir}:"
1831          exit 1              cat make_${pdir}.errors 1>&2
1832                exit 1
1833            fi
1834      fi      fi
1835  fi  done
1836    
1837  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1838  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
# Line 2416  Clean: Line 2473  Clean:
2473          @make clean          @make clean
2474          @make cleanlinks          @make cleanlinks
2475          -rm -f \$(SPECIAL_FILES)          -rm -f \$(SPECIAL_FILES)
2476          -rm -f genmake* make.log run.log *.bak          -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
2477  CLEAN:  CLEAN:
2478          @make Clean          @make Clean
2479          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2480          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2481          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2482          -rm -f \$(EXECUTABLE) *.txt STD* *diagnostics.log datetime          -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
2483          -rm -rf mnc_test_*          -rm -rf mnc_test_*
2484    
2485  #eh3 Makefile: makefile  #eh3 Makefile: makefile
# Line 2510  ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF Line 2567  ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF
2567  ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"  ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2568  for i in $ad_vars ; do  for i in $ad_vars ; do
2569      name=$i      name=$i
2570      t1="t2=\$"`echo $i`      t1="t2=\$"`echo "$i"`
2571      eval $t1      eval $t1
2572      printf "%-20s = " $name >> $MAKEFILE      printf "%-20s = " $name >> $MAKEFILE
2573      echo $t2 >> $MAKEFILE      echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2574  done  done
2575    
2576  echo "  Add the source list for AD code generation"  echo "  Add the source list for AD code generation"
# Line 2530  rm -f ad_files Line 2587  rm -f ad_files
2587  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2588    
2589  # ... AD ...  # ... AD ...
2590  adall: ad_taf  adall: \$(EXE_AD)
2591  adtaf: ad_taf_output.$FS  adtaf: ad_taf_output.$FS
2592  adtamc: ad_tamc_output.$FS  adtamc: ad_tamc_output.$FS
2593    
# Line 2550  adtafonly: Line 2607  adtafonly:
2607          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2608          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2609    
2610  ad_taf: ad_taf_output.o \$(OBJFILES)  \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2611          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2612    
2613  ad_tamc_output.$FS: ad_input_code.$FS  ad_tamc_output.$FS: ad_input_code.$FS
2614          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS

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