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Revision 1.224 - (show annotations) (download)
Fri Aug 12 21:03:25 2011 UTC (8 years ago) by jmc
Branch: MAIN
Changes since 1.223: +8 -2 lines
refine previous modif (getting compiler version)

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.223 2011/08/10 19:39:35 jmc Exp $
4 # $Name: $
5 #
6 # Makefile generator for MITgcm UV codes
7 # created by cnh 03/98
8 # adapted by aja 06/98
9 # modified by aja 01/00
10 # rewritten in bash by eh3 08/03
11
12 # Explain usage
13 usage() {
14 cat <<EOF
15
16 Usage: "$0" [OPTIONS]
17 where [OPTIONS] can be:
18
19 -help | --help | -h | --h
20 Print this help message and exit.
21
22 -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
23 -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
24 Use "NAME" as the adoptfile. By default, the file at
25 "tools/adjoint_options/adjoint_default" will be used.
26
27 -nooptfile | --nooptfile
28 -optfile NAME | --optfile NAME | -of NAME | --of NAME
29 -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
30 Use "NAME" as the optfile. By default, an attempt will be
31 made to find an appropriate "standard" optfile in the
32 tools/build_options/ directory.
33
34 -pdepend NAME | --pdepend NAME
35 -pdepend=NAME | --pdepend=NAME
36 Get package dependency information from "NAME".
37
38 -pgroups NAME | --pgroups NAME
39 -pgroups=NAME | --pgroups=NAME
40 Get the package groups information from "NAME".
41
42 -bash NAME
43 Explicitly specify the Bourne or BASH shell to use
44
45 -make NAME | -m NAME
46 --make=NAME | -m=NAME
47 Use "NAME" for the MAKE program. The default is "make" but
48 many platforms, "gmake" is the preferred choice.
49
50 -makefile NAME | -mf NAME
51 --makefile=NAME | -mf=NAME
52 Call the makefile "NAME". The default is "Makefile".
53
54 -makedepend NAME | -md NAME
55 --makedepend=NAME | -md=NAME
56 Use "NAME" for the MAKEDEPEND program.
57
58 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
59 -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
60 Specify the location of the MITgcm ROOTDIR as "NAME".
61 By default, genamke will try to find the location by
62 looking in parent directories (up to the 5th parent).
63
64 -mods NAME | --mods NAME | -mo NAME | --mo NAME
65 -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
66 Here, "NAME" specifies a list of directories that are
67 used for additional source code. Files found in the
68 "mods list" are given preference over files of the same
69 name found elsewhere.
70
71 -disable NAME | --disable NAME
72 -disable=NAME | --disable=NAME
73 Here "NAME" specifies a list of packages that we don't
74 want to use. If this violates package dependencies,
75 genamke will exit with an error message.
76
77 -enable NAME | --enable NAME
78 -enable=NAME | --enable=NAME
79 Here "NAME" specifies a list of packages that we wish
80 to specifically enable. If this violates package
81 dependencies, genamke will exit with an error message.
82
83 -standarddirs NAME | --standarddirs NAME
84 -standarddirs=NAME | --standarddirs=NAME
85 Here, "NAME" specifies a list of directories to be
86 used as the "standard" code.
87
88 -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
89 -fc=NAME | --fc=NAME
90 Use "NAME" as the fortran compiler. By default, genmake
91 will search for a working compiler by trying a list of
92 "usual suspects" such as g77, f77, etc.
93
94 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
95 Use "NAME" as the C compiler. By default, genmake
96 will search for a working compiler by trying a list of
97 "usual suspects" such as gcc, c89, cc, etc.
98
99 -use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4
100 Use "real*4" type for _RS variable (#undef REAL4_IS_SLOW)
101 *only* works if CPP_EEOPTIONS.h allows this.
102
103 -ignoretime | -ignore_time | --ignoretime | --ignore_time
104 Ignore all the "wall clock" routines entirely. This will
105 not in any way hurt the model results -- it simply means
106 that the code that checks how long the model spends in
107 various routines will give junk values.
108
109 -ts | --ts
110 Produce timing information per timestep
111 -papis | --papis
112 Produce summary MFlop/s (and IPC) with PAPI per timestep
113 -pcls | --pcls
114 Produce summary MFlop/s etc. with PCL per timestep
115 -foolad | --foolad
116 Fool the AD code generator
117 -papi | --papi
118 Performance analysis with PAPI
119 -pcl | --pcl
120 Performance analysis with PCL
121 -hpmt | --hpmt
122 Performance analysis with the HPM Toolkit
123
124 -ieee | --ieee
125 use IEEE numerics. Note that this option *only* works
126 if it is supported by the OPTFILE that is being used.
127 -devel | --devel
128 Add additional warning and debugging flags for development
129 (if supported by the OPTFILE); also switch to IEEE numerics.
130 -gsl | --gsl
131 Use GSL to control floating point rounding and precision
132
133 -mpi | --mpi
134 Include MPI header files and link to MPI libraries
135 -mpi=PATH | --mpi=PATH
136 Include MPI header files and link to MPI libraries using MPI_ROOT
137 set to PATH. i.e. Include files from \$PATH/include, link to libraries
138 from \$PATH/lib and use binaries from \$PATH/bin.
139
140 -omp | --omp
141 Activate OpenMP code + use Compiler option OMPFLAG
142 -omp=OMPFLAG | --omp=OMPFLAG
143 Activate OpenMP code + use Compiler option OMPFLAG
144
145 -es | --es | -embed-source | --embed-source
146 Embed a tarball containing the full source code
147 (including the Makefile, etc.) used to build the
148 executable [off by default]
149
150 -ds | --ds
151 Report genmake internal variables status (DUMPSTATE)
152 to file "genmake_state" (for debug purpose)
153
154 While it is most often a single word, the "NAME" variables specified
155 above can in many cases be a space-delimited string such as:
156
157 --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
158 -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
159 -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
160
161 which, depending upon your shell, may need to be single-quoted.
162
163 For more detailed genmake documentation, please see:
164
165 http://mitgcm.org/public/devel_HOWTO/
166
167 EOF
168
169 exit 1
170 }
171
172 # Search for particular CPP #cmds associated with packages
173 # usage: test_for_package_in_cpp_options CPP_file package_name
174 test_for_package_in_cpp_options() {
175 cpp_options=$1
176 pkg=$2
177 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
178 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
179 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
180 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
181 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
182 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
183 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
184 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
185 }
186
187 # Search for particular CPP #cmds associated with MPI
188 # usage: test_for_mpi_in_cpp_eeoptions CPP_file
189 test_for_mpi_in_cpp_eeoptions() {
190 cpp_options=$1
191 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
192 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
193 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
194 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
195 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
196 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
197 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
198 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
199 }
200
201 # Search for particular string in a file. Return 1 if detected, 0 if not
202 # usage: test_for_string_in_file file string
203 test_for_string_in_file() {
204 file=$1
205 strng=$2
206 grep -i "$strng" $file > /dev/null 2>&1
207 RETVAL=$?
208 if test "x${RETVAL}" = x0 ; then
209 printf "Error: In $file there is an illegal line: "
210 grep -i "$strng" $file
211 exit 99
212 fi
213 return 0
214 }
215
216 # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
217 # the package list.
218 expand_pkg_groups() {
219 new_packages=
220 if test -r $PKG_GROUPS ; then
221 cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
222 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
223 matched=0
224 for i in $PACKAGES ; do
225 line=`grep "^ *$i" ./p2.tmp`
226 RETVAL=$?
227 if test "x$RETVAL" = x0 ; then
228 matched=1
229 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
230 echo " replacing \"$i\" with:$replace"
231 new_packages="$new_packages $replace"
232 else
233 new_packages="$new_packages $i"
234 fi
235 done
236 PACKAGES=$new_packages
237 rm -f ./p[1,2].tmp
238 return $matched
239 else
240 echo "Warning: can't read package groups definition file: $PKG_GROUPS"
241 fi
242 }
243
244 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
245 # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
246 check_for_broken_Ff() {
247 # Do we have defaults for $FS and/or $FS90 ?
248 tfs=f
249 tfs9=f90
250 if test "x$FS" != x ; then
251 tfs="$FS"
252 fi
253 if test "x$FS90" != x ; then
254 tfs9="$FS90"
255 fi
256
257 # First check the ability to create a *.F/.f pair.
258 cat <<EOF >> genmake_hello.F
259 program hello
260 write(*,*) 'hi'
261 stop
262 end
263 EOF
264 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
265 RETVAL=$?
266 if test "x$RETVAL" != x0 ; then
267 if test "x$FS" = x ; then
268 FS='for'
269 FS90='fr9'
270 check_for_broken_Ff
271 else
272 cat <<EOF 2>&1
273 ERROR: Your file system cannot distinguish between *.F and *.f files
274 (fails the "cp" test) and this program cannot find a suitable
275 replacement extension. Please try a different build environment or
276 contact the <MITgcm-support@mitgcm.org> list for help.
277
278 EOF
279 exit -1
280 fi
281 return
282 fi
283 rm -f genmake_hello.*
284
285 # Check the ability of ${MAKE} and ${LN} to use the current set
286 # of extensions.
287 cat <<EOF >> genmake_hello.F
288 program hello
289 write(*,*) 'hi'
290 stop
291 end
292 EOF
293 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
294 cat <<EOF >> $MAKEFILE
295 .SUFFIXES:
296 .SUFFIXES: .$tfs .F
297 .F.$tfs:
298 $LN \$< \$@
299 EOF
300 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
301 RETVAL=$?
302 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
303 if test "x$FS" = x ; then
304 FS='for'
305 FS90='fr9'
306 check_for_broken_Ff
307 else
308 cat <<EOF 2>&1
309 ERROR: Your file system cannot distinguish between *.F and *.f files
310 (fails the "make/ln" test) and this program cannot find a suitable
311 replacement extension. Please try a different build environment or
312 contact the <MITgcm-support@mitgcm.org> list for help.
313
314 EOF
315 exit -1
316 return
317 fi
318 fi
319 rm -f genmake_hello.* $MAKEFILE
320 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
321
322 # If we make it here, use the extensions
323 FS=$tfs
324 FS90=$tfs9
325 return
326 }
327
328 look_for_makedepend() {
329
330 # The "original" makedepend is part of the Imake system that is
331 # most often distributed with XFree86 or with an XFree86 source
332 # package. As a result, many machines (eg. generic Linux) do not
333 # have a system-default "makedepend" available. For those
334 # systems, we have two fall-back options:
335 #
336 # 1) a makedepend implementation shipped with the cyrus-imapd
337 # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
338 #
339 # 2) a known-buggy xmakedpend shell script
340 #
341 # So the choices are, in order:
342 #
343 # 1) use the user-specified program
344 # 2) use a system-wide default
345 # 3) locally build and use the cyrus implementation
346 # 4) fall back to the buggy local xmakedpend script
347 #
348 echo >> $LOGFILE
349 echo "running: look_for_makedepend()" >> $LOGFILE
350 if test "x${MAKEDEPEND}" != x ; then
351 echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
352 RETVAL=$?
353 if test x"$RETVAL" = x0 ; then
354 build_cyrus_makedepend
355 RETVAL=$?
356 if test "x$RETVAL" != x0 ; then
357 echo "WARNING: unable to build cyrus-makedepend. Try 'makedepend'"
358 MAKEDEPEND=
359 fi
360 else
361 echo "${MAKEDEPEND}" | grep 'tools.xmakedepend' > /dev/null 2>&1
362 RETVAL=$?
363 if test "x$RETVAL" = x0 ; then
364 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
365 fi
366 echo " --> MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
367 fi
368 fi
369 if test "x${MAKEDEPEND}" = x ; then
370 which makedepend > /dev/null 2>&1
371 RV0=$?
372 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
373 # echo 'MAKEFILE="'$MAKEFILE'"'
374 cat <<EOF >> $MAKEFILE
375 # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
376 #
377 # Some "makedepend" implementations will die if they cannot
378 # find a Makefile -- so this file is here to gives them an
379 # empty one to find and parse.
380 EOF
381 cat <<EOF >> genmake_tc.f
382 program test
383 write(*,*) 'test'
384 stop
385 end
386 EOF
387 makedepend genmake_tc.f > /dev/null 2>&1
388 RV1=$?
389 test -f $MAKEFILE && rm -f $MAKEFILE
390 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
391 if test "x${RV0}${RV1}" = x00 ; then
392 MAKEDEPEND=makedepend
393 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
394 else
395 echo " system-default makedepend not found. Try to build cyrus-makedepend"
396 # Try to build the cyrus implementation
397 build_cyrus_makedepend
398 RETVAL=$?
399 if test "x$RETVAL" != x0 ; then
400 echo "WARNING: unable to build cyrus-makedepend. Use local xmakedepend"
401 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
402 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
403 fi
404 fi
405 fi
406 }
407
408 build_cyrus_makedepend() {
409 echo >> $LOGFILE
410 echo "running: build_cyrus_makedepend()" >> $LOGFILE
411 rm -f ./genmake_cy_md
412 (
413 cd $ROOTDIR/tools/cyrus-imapd-makedepend \
414 && ./configure > /dev/null 2>&1 \
415 && make > /dev/null 2>&1
416 if test -x ./makedepend.exe ; then
417 $LN ./makedepend.exe ./makedepend
418 fi
419 ./makedepend ifparser.c > /dev/null 2>&1 \
420 && echo "true"
421 ) > ./genmake_cy_md
422 grep true ./genmake_cy_md > /dev/null 2>&1
423 RETVAL=$?
424 rm -f ./genmake_cy_md
425 if test "x$RETVAL" = x0 ; then
426 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
427 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
428 return 0
429 else
430 echo "WARNING: fail to build cyrus-imapd-makedepend" >> $LOGFILE
431 return 1
432 fi
433 }
434
435 build_embed_encode()
436 {
437 printf " building the embed-encode utility... "
438 if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
439 if test ! -d "$ROOTDIR/tools/embed_encode" ; then
440 echo
441 echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
442 echo
443 EMBED_SRC=f
444 return 1
445 fi
446 clist="cc gcc c89 $CC"
447 for ic in $clist ; do
448 comm="$ic -o encode_files encode_files.c"
449 ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
450 RETVAL=$?
451 if test "x$RETVAL" = x0 ; then
452 echo "OK"
453 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
454 return 0
455 fi
456 done
457 echo
458 echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
459 echo " so it has been disabled"
460 echo
461 EMBED_SRC=f
462 return 1
463 fi
464 echo "OK"
465 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
466 }
467
468 # look for possible C compilers
469 look_for_C_compilers() {
470 echo >> $LOGFILE
471 echo "running: look_for_C_compilers()" >> $LOGFILE
472 rm -f ./genmake_hello.c ./genmake_hello
473 cat >> genmake_hello.c << EOF
474 #include <stdio.h>
475 int main(int argc, char **argv) {
476 printf("Hello!\n");
477 return 0;
478 }
479 EOF
480 tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
481 p_CC=
482 for c in $tmp ; do
483 COMM="$c $CFLAGS -o genmake_hello genmake_hello.c"
484 echo $COMM >> $LOGFILE
485 $COMM >> $LOGFILE 2>&1
486 RETVAL=$?
487 if test "x${RETVAL}" = x0 ; then
488 echo " $c test successful" >> $LOGFILE
489 p_CC="$p_CC $c"
490 fi
491 done
492 rm -f ./genmake_hello.c ./genmake_hello
493 if test "x${p_CC}" = x ; then
494 cat 1>&2 <<EOF
495
496 Error: No C compilers were found in your path. Please specify one using:
497
498 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
499 2) the CC or MITGCM_CC environment variables.
500
501 EOF
502 exit 1
503 else
504 echo " The possible C compilers found in your path are: $p_CC" | tee -a $LOGFILE
505 if test "x$CC" = x ; then
506 CC=`echo $p_CC | $AWK '{print $1}'`
507 echo " Setting C compiler to: "$CC
508 fi
509 fi
510 echo " --> set CC='$CC'" >> $LOGFILE
511 }
512
513 # Guess possible config options for this host
514 find_possible_optfile() {
515
516 echo >> $LOGFILE
517 echo "running: find_possible_optfile()" >> $LOGFILE
518 tmp1=`uname`"_"`uname -m`
519 tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
520 tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
521 tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
522 tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
523 tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
524 PLATFORM=$tmp3
525 echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
526 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
527 echo " The platform appears to be: $PLATFORM" | tee -a $LOGFILE
528
529 #================================================================
530 # look for possible FORTRAN compilers
531 echo " look for possible FORTRAN compilers" >> $LOGFILE
532 tmp="$MITGCM_FC $FC efc gfortran g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 g95"
533 p_FC=
534 rm -f ./genmake_hello.f
535 cat >> genmake_hello.f <<EOF
536 program hello
537 do i=1,3
538 print *, 'hello world : ', i
539 enddo
540 end
541 EOF
542 for f in $tmp ; do
543 COMM="$f -o genmake_hello genmake_hello.f"
544 echo $COMM >> $LOGFILE
545 $COMM >> $LOGFILE 2>&1
546 RETVAL=$?
547 if test "x${RETVAL}" = x0 ; then
548 echo " $f test successful" >> $LOGFILE
549 p_FC="$p_FC $f"
550 fi
551 done
552 rm -f ./genmake_hello.f ./genmake_hello
553 if test "x${p_FC}" = x ; then
554 cat 1>&2 <<EOF
555
556 Error: No Fortran compilers were found in your path. Please specify one using:
557
558 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
559 2) a command-line option (eg. "-fc NAME"), or
560 3) the FC or MITGCM_FC environment variables.
561
562 EOF
563 exit 1
564 else
565 echo " The possible FORTRAN compilers found in your path are: $p_FC" | tee -a $LOGFILE
566 fi
567
568 # Use the first of the compilers found in the current PATH
569 # that has a correctly-named optfile
570 if test "x$OPTFILE" = x -a "x$FC" = x ; then
571 for i in $p_FC ; do
572 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
573 if test -r $OPTFILE ; then
574 echo " Setting OPTFILE to: "$OPTFILE | tee -a $LOGFILE
575 break
576 fi
577 done
578 fi
579
580 if test "x$OPTFILE" = x ; then
581 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
582 if test ! -r $OPTFILE ; then
583 echo " I looked for the file "$OPTFILE" but did not find it"
584 fi
585 fi
586
587 if test "x$OPTFILE" = x ; then
588 cat 1>&2 <<EOF
589
590 Error: No options file was found in: $ROOTDIR/tools/build_options/
591 that matches this platform ("$PLATFORM") and the compilers found in
592 your path. Please specify an "optfile" using:
593
594 1) the command line (eg. "-optfile=path/to/OPTFILE"), or
595 2) the MITGCM_OF environment variable.
596
597 If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
598
599 EOF
600 exit 1
601 fi
602
603 # # look for possible MPI libraries
604 # mpi_libs=
605 # mpi_fort=`which mpif77 2>/dev/null`
606 # RETVAL=$?
607 # if test "x${RETVAL}" = x0 ; then
608 # cat >>test.f <<EOF
609 # PROGRAM HELLO
610 # DO 10, I=1,10
611 # PRINT *,'Hello World'
612 # 10 CONTINUE
613 # STOP
614 # END
615 # EOF
616 # eval "$mpi_fort -showme test.f > out"
617 # RETVAL=$?
618 # if test "x${RETVAL}" = x0 ; then
619 # a=`cat out`
620 # for i in $a ; do
621 # case $i in
622 # -*)
623 # mpi_libs="$mpi_libs $i" ;;
624 # esac
625 # done
626 # echo "The MPI libs appear to be:"
627 # echo " "$mpi_libs
628 # fi
629 # rm -f test.f out
630 # fi
631 }
632
633 # Parse the package dependency information
634 get_pdepend_list() {
635
636 # strip the comments and then convert the dependency file into
637 # two arrays: PNAME, DNAME
638 cat $1 | sed -e 's/#.*$//g' \
639 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
640 > ./.pd_tmp
641 RETVAL=$?
642 if test ! "x${RETVAL}" = x0 ; then
643 echo "Error: unable to parse package dependencies -- please check PKG_DEPEND=\"$1\""
644 exit 1
645 fi
646 . ./.pd_tmp
647 rm -f ./.pd_tmp
648 }
649
650 # Build a CPP macro to automate calling C routines from FORTRAN
651 get_fortran_c_namemangling() {
652
653 #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
654 if test ! "x$FC_NAMEMANGLE" = x ; then
655 return 0
656 fi
657 echo " running: get_fortran_c_namemangling()" >> $LOGFILE
658
659 default_nm="#define FC_NAMEMANGLE(X) X ## _"
660
661 cat > genmake_test.c <<EOF
662 void tcall( char * string ) { tsub( string ); }
663 EOF
664 COMM="$CC $CFLAGS -c genmake_test.c"
665 echo ' '$COMM >> $LOGFILE
666 $COMM >> $LOGFILE 2>&1
667 RETVAL=$?
668 if test "x$RETVAL" != x0 ; then
669 FC_NAMEMANGLE=$default_nm
670 cat <<EOF>> $LOGFILE
671
672 WARNING: C test compile fails
673 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
674 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
675 EOF
676 return 1
677 fi
678 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
679 RETVAL=$?
680 if test "x$RETVAL" != x0 ; then
681 FC_NAMEMANGLE=$default_nm
682 cat <<EOF>> $LOGFILE
683
684 WARNING: The "nm" command failed.
685 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
686 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
687 EOF
688 return 1
689 fi
690 cat > genmake_tcomp.$FS <<EOF
691 subroutine tcall( string )
692 character*(*) string
693 call tsub( string )
694 end
695 EOF
696 COMM="$FC $FFLAGS -c genmake_tcomp.$FS"
697 echo ' '$COMM >> $LOGFILE
698 $COMM >> $LOGFILE 2>&1
699 RETVAL=$?
700 if test "x$RETVAL" != x0 ; then
701 FC_NAMEMANGLE=$default_nm
702 cat <<EOF>> $LOGFILE
703
704 WARNING: FORTRAN test compile fails -- please see '$LOGFILE'
705 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
706 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
707 EOF
708 return 1
709 fi
710 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
711 RETVAL=$?
712 if test "x$RETVAL" != x0 ; then
713 FC_NAMEMANGLE=$default_nm
714 cat <<EOF>> $LOGFILE
715
716 WARNING: The "nm" command failed.
717 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
718 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
719 EOF
720 return 1
721 fi
722
723 c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
724 f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
725 c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
726 f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
727
728 nmangle="X"
729 if test "x$c_a" != "x$f_a" ; then
730 comm="echo x$f_a | sed -e 's|x$c_a||'"
731 a=`eval $comm`
732 nmangle="$a ## $nmangle"
733 fi
734 if test "x$c_b" != "x$f_b" ; then
735 comm="echo x$f_b | sed -e 's|x$c_b||'"
736 b=`eval $comm`
737 nmangle="$nmangle ## $b"
738 fi
739
740 FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
741
742 # cleanup the testing files
743 rm -f genmake_tcomp.* genmake_test.*
744
745 echo " --> set FC_NAMEMANGLE='$FC_NAMEMANGLE'" >> $LOGFILE
746 }
747
748 check_HAVE_CLOC() {
749 echo >> $LOGFILE
750 echo "running: check_HAVE_CLOC()" >> $LOGFILE
751 get_fortran_c_namemangling
752 cat <<EOF > genmake_tc_1.c
753 $FC_NAMEMANGLE
754 #include <stdio.h>
755 #include <stdlib.h>
756 #include <unistd.h>
757 #include <assert.h>
758 #include <sys/time.h>
759 void FC_NAMEMANGLE(cloc) ( double *curtim )
760 {
761 struct timeval tv1;
762 gettimeofday(&tv1 , (void *)NULL );
763 *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
764 *curtim = *curtim/1.E6;
765 }
766 EOF
767 COMM="$CC $CFLAGS -c genmake_tc_1.c"
768 echo $COMM >> $LOGFILE
769 $COMM >> $LOGFILE 2>&1
770 RET_C=$?
771 cat <<EOF > genmake_tc_2.$FS
772 program hello
773 REAL*8 wtime
774 external cloc
775 call cloc(wtime)
776 print *," HELLO WORLD", wtime
777 end
778 EOF
779 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
780 echo $COMM >> $LOGFILE
781 $COMM >> $LOGFILE 2>&1
782 RET_F=$?
783 test -x ./genmake_tc && ./genmake_tc >> $LOGFILE 2>&1
784 RETVAL=$?
785 if test "x$RETVAL" = x0 ; then
786 HAVE_CLOC=t
787 DEFINES="$DEFINES -DHAVE_CLOC"
788 fi
789 rm -f genmake_tc*
790 echo " --> set HAVE_CLOC='$HAVE_CLOC'" >> $LOGFILE
791 }
792
793 check_HAVE_SIGREG() {
794 if test ! "x$HAVE_SIGREG" = x ; then
795 return
796 fi
797 echo >> $LOGFILE
798 echo "running: check_HAVE_SIGREG()" >> $LOGFILE
799 get_fortran_c_namemangling
800 cat <<EOF > genmake_tc_1.c
801 $FC_NAMEMANGLE
802 #include <stdlib.h>
803 #include <stdio.h>
804 #include <signal.h>
805 #include <errno.h>
806 #include <ucontext.h>
807
808 int * ip;
809
810 static void killhandler(
811 unsigned int sn, siginfo_t si, struct ucontext *sc )
812 {
813 *ip = *ip + 1;
814 return;
815 }
816
817 void FC_NAMEMANGLE(sigreg) (int * aip)
818 {
819 struct sigaction s;
820 ip = aip;
821 s.sa_flags = SA_SIGINFO;
822 s.sa_sigaction = (void *)killhandler;
823 if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
824 printf("Sigaction returned error = %d\n", errno);
825 exit(0);
826 }
827 return;
828 }
829 EOF
830 COMM="$CC $CFLAGS -c genmake_tc_1.c"
831 echo $COMM >> $LOGFILE
832 $COMM >> $LOGFILE 2>&1
833 RET_C=$?
834 cat <<EOF > genmake_tc_2.$FS
835 program hello
836 integer anint
837 common /iv/ anint
838 external sigreg
839 call sigreg(anint)
840 end
841 EOF
842 cat genmake_tc_2.$FS >> $LOGFILE
843 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
844 echo $COMM >> $LOGFILE
845 $COMM >> $LOGFILE 2>&1
846 RETVAL=$?
847 if test "x$RETVAL" = x0 ; then
848 HAVE_SIGREG=t
849 DEFINES="$DEFINES -DHAVE_SIGREG"
850 fi
851 rm -f genmake_tc*
852 echo " --> set HAVE_SIGREG='$HAVE_SIGREG'" >> $LOGFILE
853 }
854
855 check_HAVE_SETRLSTK() {
856 if test "x$HAVE_SETRLSTK" = xt ; then
857 DEFINES="$DEFINES -DHAVE_SETRLSTK"
858 return
859 fi
860 if test ! "x$HAVE_SETRLSTK" = x ; then
861 return
862 fi
863 echo >> $LOGFILE
864 echo "running: check_HAVE_SETRLSTK()" >> $LOGFILE
865 get_fortran_c_namemangling
866 cat <<EOF > genmake_tc_1.c
867 $FC_NAMEMANGLE
868 #include <sys/time.h>
869 #include <sys/resource.h>
870 #include <unistd.h>
871 void FC_NAMEMANGLE(setrlstk) ()
872 {
873 struct rlimit rls;
874 rls.rlim_cur = RLIM_INFINITY;
875 rls.rlim_max = RLIM_INFINITY;
876 setrlimit(RLIMIT_STACK, &rls);
877 return;
878 }
879 EOF
880 COMM="$CC $CFLAGS -c genmake_tc_1.c"
881 echo $COMM >> $LOGFILE
882 $COMM >> $LOGFILE 2>&1
883 RET_C=$?
884 cat <<EOF > genmake_tc_2.$FS
885 program hello
886 external setrlstk
887 call setrlstk()
888 end
889 EOF
890 cat genmake_tc_2.$FS >> $LOGFILE
891 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
892 echo $COMM >> $LOGFILE
893 $COMM >> $LOGFILE 2>&1
894 RETVAL=$?
895 if test "x$RETVAL" = x0 ; then
896 HAVE_SETRLSTK=t
897 DEFINES="$DEFINES -DHAVE_SETRLSTK"
898 fi
899 rm -f genmake_tc*
900 echo " --> set HAVE_SETRLSTK='$HAVE_SETRLSTK'" >> $LOGFILE
901 }
902
903 check_HAVE_STAT() {
904 echo >> $LOGFILE
905 echo "running: check_HAVE_STAT()" >> $LOGFILE
906 get_fortran_c_namemangling
907 cat <<EOF > genmake_tc_1.c
908 $FC_NAMEMANGLE
909 #include <stdio.h>
910 #include <stdlib.h>
911 #include <unistd.h>
912 #include <sys/stat.h>
913 #include <sys/types.h>
914 void FC_NAMEMANGLE(tfsize) ( int *nbyte )
915 {
916 char name[512];
917 struct stat astat;
918
919 name[0] = 'a'; name[1] = '\0';
920 if (! stat(name, &astat))
921 *nbyte = (int)(astat.st_size);
922 else
923 *nbyte = -1;
924 }
925 EOF
926 COMM="$CC $CFLAGS -c genmake_tc_1.c"
927 echo $COMM >> $LOGFILE
928 $COMM >> genmake_tc.log 2>&1
929 RET_C=$?
930 cat <<EOF > genmake_tc_2.$FS
931 program hello
932 integer nbyte
933 call tfsize(nbyte)
934 print *," HELLO WORLD", nbyte
935 end
936 EOF
937 cat genmake_tc_2.$FS >> $LOGFILE
938 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
939 echo $COMM >> $LOGFILE
940 $COMM >> genmake_tc.log 2>&1
941 RETVAL=$?
942 if test "x$RETVAL" = x0 ; then
943 HAVE_STAT=t
944 DEFINES="$DEFINES -DHAVE_STAT"
945 fi
946 rm -f genmake_tc*
947 echo " --> set HAVE_STAT='$HAVE_STAT'" >> $LOGFILE
948 }
949
950 check_netcdf_libs() {
951 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
952 return
953 fi
954 echo >> $LOGFILE
955 echo "running: check_netcdf_libs()" >> $LOGFILE
956 cat <<EOF > genmake_tnc.F
957 program fgennc
958 #include "netcdf.inc"
959 EOF
960 if test ! "x$MPI" = x ; then
961 echo '#include "mpif.h"' >> genmake_tnc.F
962 fi
963 cat <<EOF >> genmake_tnc.F
964 integer iret, ncid, xid
965 iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
966 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
967 iret = nf_def_dim(ncid, 'X', 11, xid)
968 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
969 iret = nf_close(ncid)
970 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
971 end
972 EOF
973 echo "=== genmake_tnc.F >>>" > genmake_tnc.log
974 cat genmake_tnc.F >> genmake_tnc.log
975 echo "<<< genmake_tnc.F ===" >> genmake_tnc.log
976 RET_CPP=f
977 COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
978 echo "$COMM" >> genmake_tnc.log
979 eval $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
980 if test "x$RET_CPP" = xf ; then
981 echo " WARNING: CPP failed to pre-process the netcdf test." \
982 >> genmake_tnc.log
983 echo " Please check that \$INCLUDES is properly set." \
984 >> genmake_tnc.log
985 fi
986 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
987 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
988 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
989 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
990 RET_COMPILE=$?
991 cat genmake_tnc.log >> $LOGFILE
992
993 #EH3 Remove test program execution for machines that either disallow
994 #EH3 execution or cannot support it (eg. cross-compilers)
995 #EH3
996 #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
997 #EH3 RETVAL=$?
998 #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
999
1000 if test "x$RET_COMPILE" = x0 ; then
1001 HAVE_NETCDF=t
1002 echo "check_netcdf: successful" >> $LOGFILE
1003 else
1004 # try again with "-lnetcdf" added to the libs
1005 echo "==> try again with added '-lnetcdf'" > genmake_tnc.log
1006 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1007 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1008 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1009 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1010 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1011 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
1012 RET_COMPILE=$?
1013 echo >> $LOGFILE
1014 cat genmake_tnc.log >> $LOGFILE
1015 if test "x$RET_COMPILE" = x0 ; then
1016 LIBS="$LIBS -lnetcdf"
1017 HAVE_NETCDF=t
1018 echo "check_netcdf: successful" >> $LOGFILE
1019 else
1020 # try again with "-lnetcdff" added to the libs
1021 echo "==> try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
1022 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1023 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1024 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1025 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1026 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1027 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
1028 RET_COMPILE=$?
1029 echo >> $LOGFILE
1030 cat genmake_tnc.log >> $LOGFILE
1031 if test "x$RET_COMPILE" = x0 ; then
1032 LIBS="$LIBS -lnetcdff -lnetcdf"
1033 HAVE_NETCDF=t
1034 echo "check_netcdf: successful" >> $LOGFILE
1035 fi
1036 fi
1037 fi
1038 rm -f genmake_tnc*
1039 echo " --> set HAVE_NETCDF='$HAVE_NETCDF'" >> $LOGFILE
1040 }
1041
1042
1043 ###############################################################################
1044 # Sequential part of script starts here
1045 ###############################################################################
1046
1047 # Set defaults here
1048 COMMANDL="$0 $@"
1049
1050 PLATFORM=
1051 LN=
1052 S64=
1053 KPP=
1054 #FC=
1055 #CC=gcc
1056 #CPP=
1057 LINK=
1058 DEFINES=
1059 PACKAGES=
1060 ENABLE=
1061 DISABLE=
1062 # MAKEFILE=
1063 # MAKEDEPEND=
1064 PKG_DEPEND=
1065 PKG_GROUPS=
1066 DUMPSTATE=f
1067 OPTFILE=
1068 INCLUDES="-I. $INCLUDES"
1069 FFLAGS=
1070 FOPTIM=
1071 FEXTRAFLAGS=
1072 USE_EXTENDED_SRC=
1073 EXTENDED_SRC_FLAG=
1074 GET_FC_VERSION=
1075 CFLAGS=
1076 KFLAGS1=
1077 KFLAGS2=
1078 #LDADD=
1079 LIBS=
1080 KPPFILES=
1081 NOOPTFILES=
1082 NOOPTFLAGS=
1083 MPI=
1084 MPIPATH=
1085 OMP=
1086 OMPFLAG=
1087 USE_R4=
1088 TS=
1089 PAPIS=
1090 PCLS=
1091 FOOLAD=
1092 PAPI=
1093 PCL=
1094 HPMT=
1095 GSL=
1096 DEVEL=
1097 HAVE_TEST_L=
1098
1099 # DEFINES checked by test compilation or command-line
1100 HAVE_SYSTEM=
1101 HAVE_FDATE=
1102 FC_NAMEMANGLE=
1103 HAVE_CLOC=
1104 # HAVE_SETRLSTK=
1105 HAVE_STAT=
1106 HAVE_NETCDF=
1107 HAVE_ETIME=
1108 IGNORE_TIME=
1109
1110 MODS=
1111 TOOLSDIR=
1112 SOURCEDIRS=
1113 INCLUDEDIRS=
1114 STANDARDDIRS="USE_THE_DEFAULT"
1115
1116 G2ARGS=
1117 BASH=
1118 PWD=`pwd`
1119 test "x$MAKE" = x && MAKE=make
1120 test "x$AWK" = x && AWK=awk
1121 EMBED_SRC=
1122 THISHOST=`hostname`
1123 THISCWD=`pwd`
1124 THISDATE=`date`
1125 THISUSER=`echo $USER`
1126 THISVER=
1127 MACHINE=`uname -a`
1128 EXECUTABLE=
1129 EXEHOOK=
1130 EXEDIR=
1131 IEEE=
1132 if test "x$MITGCM_IEEE" != x ; then
1133 IEEE=$MITGCM_IEEE
1134 fi
1135 FS=
1136 FS90=
1137
1138 AUTODIFF_PKG_USED=f
1139 AD_OPTFILE=
1140 TAF=
1141 AD_TAF_FLAGS=
1142 FTL_TAF_FLAGS=
1143 SVD_TAF_FLAGS=
1144 TAF_EXTRA=
1145 TAMC=
1146 AD_TAMC_FLAGS=
1147 FTL_TAF_FLAGS=
1148 SVD_TAMC_FLAGS=
1149 TAMC_EXTRA=
1150
1151 # The following state can be set directly by command-line switches
1152 gm_s1="OPTFILE PKG_DEPEND PKG_GROUPS DISABLE ENABLE MAKEFILE MAKEDEPEND PLATFORM"
1153 gm_s2="FC CC MPI OMP USE_R4 TS PAPIS PCLS PAPI PCL HPMT IEEE DEVEL GSL FEXTRAFLAGS"
1154 gm_s3="ROOTDIR STANDARDDIRS MODS DUMPSTATE"
1155
1156 # The following state is not directly set by command-line switches
1157 gm_s4="LN S64 LINK MAKE PACKAGES INCLUDES FFLAGS FOPTIM"
1158 gm_s5="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS"
1159 gm_s6="TOOLSDIR SOURCEDIRS INCLUDEDIRS EXEDIR EXECUTABLE EXEHOOK"
1160 gm_s7="PWD THISHOST THISUSER THISDATE THISVER MACHINE"
1161 gm_s8="FC_NAMEMANGLE HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME"
1162
1163 # The following are all related to adjoint/tangent-linear stuff
1164 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1165 gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1166 gm_s12="TAF_EXTRA TAMC_EXTRA"
1167
1168 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7 $gm_s8"
1169 gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1170
1171 cat <<EOF
1172
1173 GENMAKE :
1174
1175 A program for GENerating MAKEfiles for the MITgcm project.
1176 For a quick list of options, use "genmake2 -h"
1177 or for more detail see the Developer's HOWTO manual at:
1178 http://mitgcm.org/public/docs.html
1179
1180 EOF
1181
1182 LOGFILE="genmake.log"
1183 #- clean-up previous genmake logfiles:
1184 rm -f genmake_state genmake_*optfile $LOGFILE
1185
1186 echo "=== Processing options files and arguments ==="
1187 gm_local="genmake_local"
1188 printf " getting local config information: "
1189 if test -f $gm_local ; then
1190 echo "using $gm_local"
1191 . $gm_local
1192 # echo "DISABLE=$DISABLE"
1193 # echo "ENABLE=$ENABLE"
1194 else
1195 echo "none found"
1196 fi
1197
1198 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1199 #parse_options
1200 ac_prev=
1201 for ac_option in "$@" ; do
1202
1203 G2ARGS="$G2ARGS \"$ac_option\""
1204
1205 # If the previous option needs an argument, assign it.
1206 if test -n "$ac_prev"; then
1207 eval "$ac_prev=\$ac_option"
1208 ac_prev=
1209 continue
1210 fi
1211
1212 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1213
1214 case $ac_option in
1215
1216 -help | --help | -h | --h)
1217 usage ;;
1218
1219 -nooptfile | --nooptfile)
1220 OPTFILE="NONE" ;;
1221 -optfile | --optfile | -of | --of)
1222 ac_prev=OPTFILE ;;
1223 -optfile=* | --optfile=* | -of=* | --of=*)
1224 OPTFILE=$ac_optarg ;;
1225
1226 -adoptfile | --adoptfile | -adof | --adof)
1227 ac_prev=AD_OPTFILE ;;
1228 -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1229 AD_OPTFILE=$ac_optarg ;;
1230
1231 -pdepend | --pdepend)
1232 ac_prev=PKG_DEPEND ;;
1233 -pdepend=* | --pdepend=*)
1234 PKG_DEPEND=$ac_optarg ;;
1235
1236 -pgroups | --pgroups)
1237 ac_prev=PKG_GROUPS ;;
1238 -pgroups=* | --pgroups=*)
1239 PKG_GROUPS=$ac_optarg ;;
1240
1241 -make | --make | -m | --m)
1242 ac_prev=MAKE ;;
1243 -make=* | --make=* | -m=* | --m=*)
1244 MAKE=$ac_optarg ;;
1245
1246 -bash | --bash)
1247 ac_prev=BASH ;;
1248 -bash=* | --bash=*)
1249 BASH=$ac_optarg ;;
1250
1251 -makedepend | --makedepend | -md | --md)
1252 ac_prev=MAKEDEPEND ;;
1253 -makedepend=* | --makedepend=* | -md=* | --md=*)
1254 MAKEDEPEND=$ac_optarg ;;
1255
1256 -makefile | --makefile | -ma | --ma)
1257 ac_prev=MAKEFILE ;;
1258 -makefile=* | --makefile=* | -ma=* | --ma=*)
1259 MAKEFILE=$ac_optarg ;;
1260
1261 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1262 echo "ERROR: The platform option has been removed. Please specify"
1263 echo " the build options using the \"optfile\" mechanism."
1264 echo
1265 usage
1266 ;;
1267
1268 -rootdir | --rootdir | -rd | --rd)
1269 ac_prev=ROOTDIR ;;
1270 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1271 ROOTDIR=$ac_optarg ;;
1272
1273 -mods | --mods | -mo | --mo)
1274 ac_prev=MODS ;;
1275 -mods=* | --mods=* | -mo=* | --mo=*)
1276 MODS=$ac_optarg ;;
1277
1278 -disable | --disable)
1279 ac_prev=DISABLE ;;
1280 -disable=* | --disable=*)
1281 DISABLE=$ac_optarg ;;
1282
1283 -enable | --enable)
1284 ac_prev=ENABLE ;;
1285 -enable=* | --enable=*)
1286 ENABLE=$ac_optarg ;;
1287
1288 -standarddirs | --standarddirs)
1289 ac_prev=STANDARDDIRS ;;
1290 -standarddirs=* | --standarddirs=*)
1291 STANDARDDIRS=$ac_optarg ;;
1292
1293 # -cpp | --cpp)
1294 # ac_prev=cpp ;;
1295 # -cpp=* | --cpp=*)
1296 # CPP=$ac_optarg ;;
1297
1298 -cc | --cc)
1299 ac_prev=CC ;;
1300 -cc=* | --cc=*)
1301 CC=$ac_optarg ;;
1302
1303 -fortran | --fortran | -fc | --fc)
1304 ac_prev=FC ;;
1305 -fc=* | --fc=*)
1306 FC=$ac_optarg ;;
1307
1308 -fs | --fs)
1309 ac_prev=FS ;;
1310 -fs=* | --fs=*)
1311 FS=$ac_optarg ;;
1312
1313 -fs90 | --fs90)
1314 ac_prev=FS90 ;;
1315 -fs90=* | --fs90=*)
1316 FS90=$ac_optarg ;;
1317
1318 -use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4 )
1319 USE_R4=true ;;
1320
1321 -ieee | --ieee)
1322 IEEE=true ;;
1323 -noieee | --noieee)
1324 echo "Warning: ignore option '$ac_option' (default is already without '-ieee')" ;;
1325 -devel | --devel)
1326 IEEE=true ; DEVEL=true ;;
1327 -gsl | --gsl)
1328 GSL=true ;;
1329
1330 -ts | --ts)
1331 TS=true ;;
1332 -papis | --papis)
1333 PAPIS=true ;;
1334 -pcls | --pcls)
1335 PCLS=true ;;
1336 -foolad | --foolad)
1337 FOOLAD=true ;;
1338 -papi | --papi)
1339 PAPI=true ;;
1340 -pcl | --pcl)
1341 PCL=true ;;
1342 -hpmt | --hpmt)
1343 HPMT=true ;;
1344
1345 -mpi | --mpi)
1346 MPI=true ;;
1347 -mpi=* | --mpi=*)
1348 MPIPATH=$ac_optarg
1349 MPI=true ;;
1350
1351 -omp | --omp)
1352 OMP=true ;;
1353 -omp=* | --omp=*)
1354 OMPFLAG=$ac_optarg
1355 OMP=true ;;
1356
1357 -ds | --ds)
1358 DUMPSTATE=t ;;
1359
1360 -extra_flag | --extra_flag)
1361 ac_prev=FEXTRAFLAGS ;;
1362 -extra_flag=* | --extra_flag=*)
1363 FEXTRAFLAGS=$ac_optarg ;;
1364
1365 -taf_extra | --taf_extra)
1366 ac_prev=TAF_EXTRA ;;
1367 -taf_extra=* | --taf_extra=*)
1368 TAF_EXTRA=$ac_optarg ;;
1369
1370 -tamc_extra | --tamc_extra)
1371 ac_prev=TAMC_EXTRA ;;
1372 -tamc_extra=* | --tamc_extra=*)
1373 TAMC_EXTRA=$ac_optarg ;;
1374
1375 -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1376 IGNORE_TIME="-DIGNORE_TIME" ;;
1377
1378 -es | --es | -embed-source | --embed-source)
1379 EMBED_SRC=t ;;
1380
1381 -*)
1382 echo "Error: unrecognized option: "$ac_option
1383 usage
1384 ;;
1385
1386 *)
1387 echo "Error: unrecognized argument: "$ac_option
1388 usage
1389 ;;
1390
1391 esac
1392
1393 done
1394
1395 if test -f ./.genmakerc ; then
1396 echo
1397 echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1398 echo " file. This file format is no longer supported. For directions on"
1399 echo " how to setup and use the new \"genmake2\" script, please see:"
1400 echo " http://mitgcm.org/public/devel_HOWTO/"
1401 echo " and send an email to MITgcm-support@mitgcm.org if you need help."
1402 echo "WARNING: ignore \"./.genmakerc\" and continue."
1403 echo
1404 fi
1405
1406 # Find the MITgcm ${ROOTDIR}
1407 if test "x${ROOTDIR}" = x ; then
1408 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1409 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1410 ROOTDIR=".."
1411 else
1412 for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1413 if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1414 ROOTDIR=$d
1415 printf "Warning: ROOTDIR was not specified ;"
1416 echo " try using a local copy of MITgcm found at \"$ROOTDIR\""
1417 break
1418 fi
1419 done
1420 fi
1421 fi
1422 if test "x${ROOTDIR}" = x ; then
1423 echo "Error: Cannot determine ROOTDIR for MITgcm code."
1424 echo " Please specify a ROOTDIR using either an options "
1425 echo " file or a command-line option."
1426 exit 1
1427 fi
1428 if test ! -d ${ROOTDIR} ; then
1429 echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1430 exit 1
1431 fi
1432
1433 # Find the MITgcm ${THISVER}
1434 version_file="${ROOTDIR}/doc/tag-index"
1435 if test -f $version_file ; then
1436 THISVER=`$AWK '/^checkpoint/{print $1; exit}' $version_file`
1437 #- remove ./BUILD_INFO.h file if older than version_file
1438 if test -f ./BUILD_INFO.h -a ./BUILD_INFO.h -ot $version_file ; then
1439 echo " remove ./BUILD_INFO.h (older than ${version_file})"
1440 rm -f ./BUILD_INFO.h
1441 fi
1442 fi
1443
1444 if test "x$MAKEFILE" = x ; then
1445 MAKEFILE="Makefile"
1446 fi
1447
1448 echo " getting OPTFILE information:"
1449 if test "x${OPTFILE}" = x ; then
1450 if test "x$MITGCM_OF" = x ; then
1451 echo "Warning: no OPTFILE specified so we'll look for possible settings"
1452 printf "\n=== Searching for possible settings for OPTFILE ===\n"
1453 find_possible_optfile
1454 else
1455 OPTFILE=$MITGCM_OF
1456 fi
1457 fi
1458 if test "x$OPTFILE" != xNONE ; then
1459 if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1460 echo " using OPTFILE=\"$OPTFILE\""
1461 . "$OPTFILE"
1462 RETVAL=$?
1463 if test "x$RETVAL" != x0 ; then
1464 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1465 echo "--please check that variable syntax is bash-compatible"
1466 exit 1
1467 fi
1468 if test "x$DUMPSTATE" = xt ; then
1469 cp -f $OPTFILE "genmake_optfile"
1470 fi
1471 else
1472 echo "Error: can't read OPTFILE=\"$OPTFILE\""
1473 exit 1
1474 fi
1475 fi
1476
1477 echo " getting AD_OPTFILE information:"
1478 if test "x${AD_OPTFILE}" = x ; then
1479 if test "x$MITGCM_AD_OF" = x ; then
1480 AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1481 else
1482 AD_OPTFILE=$MITGCM_AD_OF
1483 fi
1484 fi
1485 if test "x${AD_OPTFILE}" != xNONE ; then
1486 if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1487 echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1488 . "$AD_OPTFILE"
1489 RETVAL=$?
1490 if test "x$RETVAL" != x0 ; then
1491 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1492 echo "--please check that variable syntax is bash-compatible"
1493 exit 1
1494 fi
1495 if test "x$DUMPSTATE" = xt ; then
1496 cp -f $AD_OPTFILE "genmake_ad_optfile"
1497 fi
1498 else
1499 echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1500 exit 1
1501 fi
1502 fi
1503
1504 #====================================================================
1505 # Set default values if not set by the optfile
1506 #
1507 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1508 # either set defaults or complain and abort!
1509 if test ! "x$BASH" = x ; then
1510 # add a trailing space so that it works within the Makefile syntax (see below)
1511 BASH="$BASH "
1512 fi
1513 if test "x$FC" = x ; then
1514 cat <<EOF 1>&2
1515
1516 Error: no Fortran compiler: please specify using one of the following:
1517 1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1518 2) the "-fc=XXX" command-line option
1519 3) the "./genmake_local" file
1520 EOF
1521 exit 1
1522 fi
1523 if test "x$GET_FC_VERSION" != x ; then
1524 echo "Get compiler version using: $FC $GET_FC_VERSION" >> $LOGFILE
1525 $FC $GET_FC_VERSION > genmake_fc_vers1 2> genmake_fc_vers2
1526 if test -s genmake_fc_vers1 ; then
1527 cat genmake_fc_vers1 >> $LOGFILE
1528 else
1529 cat genmake_fc_vers2 >> $LOGFILE
1530 fi
1531 echo "<-- compiler version ----" >> $LOGFILE
1532 rm -f genmake_fc_vers1 genmake_fc_vers2
1533 fi
1534
1535 if test "x$CC" = x ; then
1536 look_for_C_compilers
1537 fi
1538
1539 if test "x$LINK" = x ; then
1540 LINK=$FC
1541 fi
1542 if test "x$MAKE" = x ; then
1543 MAKE="make"
1544 fi
1545 if test "x$CPP" = x ; then
1546 CPP="cpp -traditional -P"
1547 fi
1548 #EH3 === UGLY ===
1549 # The following is an ugly little hack to check for $CPP in /lib/ and
1550 # it should eventually be replaced with a more general function that
1551 # searches a combo of the user's path and a list of "usual suspects"
1552 # to find the correct location for binaries such as $CPP.
1553 for i in " " "/lib/" ; do
1554 echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1555 done
1556 #EH3 === UGLY ===
1557 echo "#define A a" | $CPP > test_cpp 2>&1
1558 RETVAL=$?
1559 if test "x$RETVAL" != x0 ; then
1560 cat <<EOF 1>&2
1561
1562 Error: C pre-processor "$CPP" failed the test case: please specify using:
1563
1564 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1565 2) the "./genmake_local" file
1566 3) with the CPP environment variable
1567
1568 EOF
1569 exit 1
1570 else
1571 rm -f test_cpp
1572 fi
1573
1574 look_for_makedepend
1575
1576 # Check that soft-link command is set and usable
1577 if test "x$LN" = x ; then
1578 LN="ln -s"
1579 fi
1580 echo "test" > genmake_test_ln
1581 $LN genmake_test_ln genmake_tlink
1582 RETVAL=$?
1583 if test "x$RETVAL" != x0 ; then
1584 cat <<EOF 1>&2
1585
1586 Error: The command "$LN" failed -- please specify a working soft-link
1587 command in the optfile.
1588
1589 EOF
1590 exit 1
1591 fi
1592 test -L genmake_tlink > /dev/null 2>&1
1593 RETVAL=$?
1594 if test "x$RETVAL" = x0 ; then
1595 HAVE_TEST_L=t
1596 fi
1597 rm -f genmake_test_ln genmake_tlink
1598
1599 # Check for broken *.F/*.f handling and fix if possible
1600 check_for_broken_Ff
1601
1602 if test ! "x$MPI" = x ; then
1603 echo " Turning on MPI cpp macros"
1604 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1605 fi
1606 if test ! "x$OMP" = x ; then
1607 echo " Add OMPFLAG and turn on OpenMP cpp macros"
1608 FFLAGS="$FFLAGS $OMPFLAG"
1609 F90FLAGS="$F90FLAGS $OMPFLAG"
1610 DEFINES="$DEFINES -DUSE_OMP_THREADING"
1611 fi
1612
1613 if test ! "x$USE_R4" = x ; then
1614 echo " Turning on LET_RS_BE_REAL4 cpp flag"
1615 DEFINES="$DEFINES -DLET_RS_BE_REAL4"
1616 fi
1617
1618 if test ! "x$TS" = x ; then
1619 echo " Turning on timing per timestep"
1620 if test ! "x$FOOLAD" = x ; then
1621 DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1622 else
1623 DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1624 fi
1625 PACKAGES="$PACKAGES showflops"
1626 fi
1627 if test ! "x$PAPIS" = x ; then
1628 echo " Turning on PAPI flop summary per timestep"
1629 echo " Please make sure PAPIINC, PAPILIB are defined"
1630 if test ! "x$FOOLAD" = x ; then
1631 DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1632 else
1633 DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1634 fi
1635 INCLUDES="$INCLUDES $PAPIINC"
1636 LIBS="$LIBS $PAPILIB"
1637 PACKAGES="$PACKAGES showflops"
1638 fi
1639 if test ! "x$PCLS" = x ; then
1640 echo " Turning on PCL counter summary per timestep"
1641 echo " Please make sure PCLINC, PCLLIB are defined"
1642 if test ! "x$FOOLAD" = x ; then
1643 DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1644 else
1645 DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1646 fi
1647 INCLUDES="$INCLUDES $PCLINC"
1648 LIBS="$LIBS $PCLLIB"
1649 PACKAGES="$PACKAGES showflops"
1650 fi
1651 if test ! "x$PAPI" = x ; then
1652 if test ! "x$PAPIS" = x ; then
1653 echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1654 echo " Sticking with PAPI flop summary per timestep!"
1655 else
1656 echo " Turning on performance analysis with PAPI"
1657 echo " Please make sure PAPIINC, PAPILIB are defined"
1658 DEFINES="$DEFINES -DUSE_PAPI"
1659 INCLUDES="$INCLUDES $PAPIINC"
1660 LIBS="$LIBS $PAPILIB"
1661 fi
1662 fi
1663 if test ! "x$PCL" = x ; then
1664 if test ! "x$PCLS" = x ; then
1665 echo " PCL performance analysis and flop summary per timestep cannot co-exist!"
1666 echo " Sticking with PCL flop summary per timestep!"
1667 else
1668 echo " Turning on performance analysis with PCL"
1669 echo " Please make sure PCLINC, PCLLIB are defined"
1670 DEFINES="$DEFINES -DUSE_PCL"
1671 INCLUDES="$INCLUDES $PCLINC"
1672 LIBS="$LIBS $PCLLIB"
1673 fi
1674 fi
1675 if test ! "x$HPMT" = x ; then
1676 if test ! "x$PAPI" = x ; then
1677 echo " PAPI and the HPM Toolkit cannot co-exist!"
1678 echo " Sticking with PAPI!"
1679 else if test ! "x$PCL" = x ; then
1680 echo " PCL and the HPM Toolkit cannot co-exist!"
1681 echo " Sticking with PCL!"
1682 else
1683 echo " Turning on performance analysis with the HPM Toolkit"
1684 echo " Please make sure HPMTINC, HPMTLIB are defined"
1685 DEFINES="$DEFINES -DUSE_LIBHPM"
1686 INCLUDES="$INCLUDES $HPMTINC"
1687 LIBS="$LIBS $HPMTLIB"
1688 fi
1689 fi
1690 fi
1691 if test ! "x$GSL" = x ; then
1692 echo " Turning on use of GSL to control floating point calculations"
1693 echo " Please make sure GSLINC, GSLLIB are defined"
1694 DEFINES="$DEFINES -DUSE_GSL_IEEE"
1695 INCLUDES="$INCLUDES $GSLINC"
1696 LIBS="$LIBS $GSLLIB"
1697 fi
1698 #- if USE_EXTENDED_SRC is set, add EXTENDED_SRC_FLAG to FFLAGS :
1699 if test ! "x$USE_EXTENDED_SRC" = x ; then
1700 FFLAGS="$FFLAGS $EXTENDED_SRC_FLAG"
1701 F90FIXEDFORMAT="$F90FIXEDFORMAT $EXTENDED_SRC_FLAG"
1702 fi
1703
1704 printf "\n=== Checking system libraries ===\n"
1705 printf " Do we have the system() command using $FC... "
1706 cat > genmake_tcomp.$FS <<EOF
1707 program hello
1708 call system('echo hi')
1709 end
1710 EOF
1711 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1712 RETVAL=$?
1713 if test "x$RETVAL" = x0 ; then
1714 HAVE_SYSTEM=t
1715 DEFINES="$DEFINES -DHAVE_SYSTEM"
1716 echo "yes"
1717 else
1718 HAVE_SYSTEM=
1719 echo "no"
1720 fi
1721 rm -f genmake_tcomp*
1722
1723 printf " Do we have the fdate() command using $FC... "
1724 cat > genmake_tcomp.$FS <<EOF
1725 program hello
1726 CHARACTER*(128) string
1727 string = ' '
1728 call fdate( string )
1729 print *, string
1730 end
1731 EOF
1732 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1733 RETVAL=$?
1734 if test "x$RETVAL" = x0 ; then
1735 HAVE_FDATE=t
1736 DEFINES="$DEFINES -DHAVE_FDATE"
1737 echo "yes"
1738 else
1739 HAVE_FDATE=
1740 echo "no"
1741 fi
1742 rm -f genmake_tcomp*
1743
1744 printf " Do we have the etime() command using $FC... "
1745 cat > genmake_tcomp.$FS <<EOF
1746 program hello
1747 REAL*4 ACTUAL, TARRAY(2)
1748 EXTERNAL ETIME
1749 REAL*4 ETIME
1750 actual = etime( tarray )
1751 print *, tarray
1752 end
1753 EOF
1754 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1755 RETVAL=$?
1756 if test "x$RETVAL" = x0 ; then
1757 HAVE_ETIME=t
1758 DEFINES="$DEFINES -DHAVE_ETIME"
1759 echo "yes"
1760 else
1761 HAVE_ETIME=
1762 echo "no"
1763 fi
1764 rm -f genmake_tcomp*
1765
1766 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1767 check_HAVE_CLOC
1768 if test "x$HAVE_CLOC" != x ; then
1769 echo "yes"
1770 else
1771 echo "no"
1772 if test "x$EMBED_SRC" = xt ; then
1773 echo " WARNING: you requested file embedding but it has"
1774 echo " been disabled since C code cannot be called"
1775 EMBED_SRC=
1776 fi
1777 fi
1778 rm -f genmake_t*
1779
1780 printf " Can we unlimit the stack size using $FC... "
1781 check_HAVE_SETRLSTK
1782 if test "x$HAVE_SETRLSTK" = xt ; then
1783 echo "yes"
1784 else
1785 echo "no"
1786 fi
1787 rm -f genmake_t*
1788
1789 printf " Can we register a signal handler using $FC... "
1790 check_HAVE_SIGREG
1791 if test "x$HAVE_SIGREG" = xt ; then
1792 echo "yes"
1793 else
1794 echo "no"
1795 fi
1796 rm -f genmake_t*
1797
1798 printf " Can we use stat() through C calls... "
1799 check_HAVE_STAT
1800 if test "x$HAVE_STAT" != x ; then
1801 echo "yes"
1802 else
1803 echo "no"
1804 fi
1805 rm -f genmake_t*
1806
1807 printf " Can we create NetCDF-enabled binaries... "
1808 check_netcdf_libs
1809 if test "x$HAVE_NETCDF" != x ; then
1810 echo "yes"
1811 else
1812 echo "no"
1813 fi
1814 DEFINES="$DEFINES $IGNORE_TIME"
1815
1816 if test "x$EMBED_SRC" = xt ; then
1817 build_embed_encode
1818 fi
1819 if test "x$EMBED_SRC" = xt ; then
1820 ENABLE="$ENABLE embed_files"
1821 fi
1822
1823 printf "\n=== Setting defaults ===\n"
1824 printf " Adding MODS directories: "
1825 for d in $MODS ; do
1826 if test ! -d $d ; then
1827 echo
1828 echo "Error: MODS directory \"$d\" not found!"
1829 exit 1
1830 else
1831 printf "$d "
1832 SOURCEDIRS="$SOURCEDIRS $d"
1833 INCLUDEDIRS="$INCLUDEDIRS $d"
1834 fi
1835 done
1836 echo
1837
1838 #if test "x${PLATFORM}" = x ; then
1839 # PLATFORM=$p_PLATFORM
1840 #fi
1841
1842 if test "x${EXEDIR}" = x ; then
1843 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1844 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1845 EXEDIR=../exe
1846 else
1847 EXEDIR=.
1848 fi
1849 fi
1850 if test ! -d ${EXEDIR} ; then
1851 echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1852 exit 1
1853 fi
1854
1855 if test "x${TOOLSDIR}" = x ; then
1856 TOOLSDIR="$ROOTDIR/tools"
1857 fi
1858 if test ! -d ${TOOLSDIR} ; then
1859 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1860 exit 1
1861 fi
1862 if test "x$S64" = x ; then
1863 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1864 RETVAL=$?
1865 if test "x${RETVAL}" = x0 ; then
1866 S64='$(TOOLSDIR)/set64bitConst.sh'
1867 else
1868 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1869 RETVAL=$?
1870 if test "x${RETVAL}" = x0 ; then
1871 S64='$(TOOLSDIR)/set64bitConst.csh'
1872 else
1873 cat <<EOF
1874
1875 ERROR: neither of the two default scripts:
1876
1877 ${TOOLSDIR}/set64bitConst.sh
1878 ${TOOLSDIR}/set64bitConst.csh
1879
1880 are working so please check paths or specify (with \$S64) a
1881 working version of this script.
1882
1883 EOF
1884 exit 1
1885 fi
1886 fi
1887 fi
1888 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1889
1890 EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1891
1892 # Set Standard Code Directories:
1893 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1894 STANDARDDIRS="eesupp model"
1895 fi
1896 # if model in Standard-Code-Dir, add eesupp (needed to compile model)
1897 echo " $STANDARDDIRS " | grep ' model ' > /dev/null 2>&1
1898 ckM=$?
1899 echo " $STANDARDDIRS " | grep ' eesupp ' > /dev/null 2>&1
1900 ckE=$?
1901 if test $ckM = 0 -a $ckE = 1 ; then
1902 STANDARDDIRS="$STANDARDDIRS eesupp"
1903 fi
1904
1905 # We have a special set of source files in eesupp/src which are
1906 # generated from some template source files. We'll make them first so
1907 # they appear as regular source code
1908 if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1909 echo " Making source files in eesupp from templates"
1910 ( cd $ROOTDIR"/eesupp/src/" && $MAKE clean_old && $MAKE \
1911 ) > make_eesupp.errors 2>&1
1912 RETVAL=$?
1913 if test "x${RETVAL}" = x0 ; then
1914 rm -f make_eesupp.errors
1915 else
1916 echo "Error: problem encountered while building source files in eesupp:"
1917 cat make_eesupp.errors 1>&2
1918 exit 1
1919 fi
1920 fi
1921
1922 #same for pkg/exch2 and pkg/regrid
1923 for pdir in exch2 regrid ; do
1924 if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1925 echo " Making source files in pkg/${pdir} from templates"
1926 ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE clean_old && $MAKE \
1927 ) > make_${pdir}.errors 2>&1
1928 RETVAL=$?
1929 if test "x${RETVAL}" = x0 ; then
1930 rm -f make_${pdir}.errors
1931 else
1932 echo "Error: problem encountered while building source files in pkg/${pdir}:"
1933 cat make_${pdir}.errors 1>&2
1934 exit 1
1935 fi
1936 fi
1937 done
1938
1939 printf "\n=== Determining package settings ===\n"
1940 if test "x${PKG_DEPEND}" = x ; then
1941 tmp=$ROOTDIR"/pkg/pkg_depend"
1942 if test -r $tmp ; then PKG_DEPEND=$tmp ; fi
1943 fi
1944 if test "x${PKG_DEPEND}" = x ; then
1945 echo "Warning: No package dependency information was specified."
1946 echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1947 else
1948 if test ! -r ${PKG_DEPEND} ; then
1949 echo "Error: can't read package dependency info from PKG_DEPEND=\"$PKG_DEPEND\""
1950 exit 1
1951 fi
1952 echo " getting package dependency info from $PKG_DEPEND"
1953 # Strip the comments and then convert the dependency file into arrays: PNAME, DNAME
1954 get_pdepend_list $PKG_DEPEND
1955 fi
1956
1957 # A default package groups file "$ROOTDIR/pkg/pkg_groups" is provided
1958 # to define the "default_pkg_list" and package groups (for convenience, one
1959 # can specify a group of packages using names like "ocean" and "atmosphere").
1960 if test "x${PKG_GROUPS}" = x ; then
1961 tmp=$ROOTDIR"/pkg/pkg_groups"
1962 if test -r $tmp ; then PKG_GROUPS=$tmp ; fi
1963 fi
1964 if test "x${PKG_GROUPS}" = x ; then
1965 echo "Warning: No package groups information was specified."
1966 echo " Please check that ROOTDIR/pkg/pkg_groups exists."
1967 else
1968 if test ! -r ${PKG_GROUPS} ; then
1969 echo "Error: can't read package groups info from PKG_GROUPS=\"$PKG_GROUPS\""
1970 exit 1
1971 fi
1972 echo " getting package groups info from $PKG_GROUPS"
1973 fi
1974
1975 # Search for packages to compile.
1976 echo " checking list of packages to compile:"
1977 PKG_LIST=
1978 if test "x${PKG_LIST}" = x ; then
1979 for i in "." $MODS ; do
1980 if test -r $i"/packages.conf" ; then
1981 PKG_LIST=$i"/packages.conf"
1982 break
1983 fi
1984 done
1985 fi
1986 if test "x${PKG_LIST}" = x ; then
1987 pkg_list='default_pkg_list'
1988 if test "x${PKG_GROUPS}" = x ; then
1989 echo "Error: need package groups info to expand pkg_list=\"$pkg_list\""
1990 exit 1
1991 fi
1992 else
1993 if test ! -r $PKG_LIST ; then
1994 echo "Error: can't read package list from PKG_LIST=\"$PKG_LIST\""
1995 exit 1
1996 else
1997 echo " using PKG_LIST=\"$PKG_LIST\""
1998 # Strip the comments and add all the names
1999 pkg_list=`cat $PKG_LIST | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
2000 RETVAL=$?
2001 if test "x${RETVAL}" != x0 ; then
2002 printf "Error: can't parse package list "
2003 echo "-- please check PKG_LIST=\"$PKG_LIST\""
2004 exit 1
2005 fi
2006 fi
2007 fi
2008 for i in $pkg_list ; do
2009 PACKAGES="$PACKAGES $i"
2010 done
2011 echo " before group expansion packages are:$PACKAGES"
2012 if test "x${PKG_GROUPS}" != x ; then
2013 RET=1
2014 while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
2015 echo " after group expansion packages are: $PACKAGES"
2016 fi
2017
2018 echo " applying DISABLE settings"
2019 echo "" > ./.tmp_pack
2020 for i in $PACKAGES ; do
2021 echo $i >> ./.tmp_pack
2022 done
2023 for i in `grep "-" ./.tmp_pack` ; do
2024 j=`echo $i | sed 's/[-]//'`
2025 DISABLE="$DISABLE $j"
2026 done
2027 pack=
2028 for p in $PACKAGES ; do
2029 addit="t"
2030 for d in $DISABLE ; do
2031 if test "x$p" = "x$d" ; then
2032 addit="f"
2033 fi
2034 done
2035 if test "x$addit" = xt ; then
2036 pack="$pack $p"
2037 fi
2038 done
2039 PACKAGES="$pack"
2040 echo " applying ENABLE settings"
2041 echo "" > ./.tmp_pack
2042 PACKAGES="$PACKAGES $ENABLE"
2043 # Test if each explicitly referenced package exists
2044 for i in $PACKAGES ; do
2045 j=`echo $i | sed 's/[-+]//'`
2046 if test ! -d "$ROOTDIR/pkg/$j" ; then
2047 echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'"
2048 exit 1
2049 fi
2050 echo $i >> ./.tmp_pack
2051 done
2052 PACKAGES=
2053 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
2054 PACKAGES="$PACKAGES $i"
2055 done
2056 rm -f ./.tmp_pack
2057 echo " packages are: $PACKAGES"
2058
2059 # Check for package MNC: if NetCDF is available, then build the MNC
2060 # template files ; otherwise, delete mnc from the list of packages.
2061 echo " $PACKAGES " | grep ' mnc ' > /dev/null 2>&1
2062 mnc_in=$?
2063 if test "x$HAVE_NETCDF" != xt ; then
2064 if test "x$mnc_in" = x0 ; then
2065 cat <<EOF
2066 *********************************************************************
2067 WARNING: the "mnc" package was enabled but tests failed to compile
2068 NetCDF applications. Please check that:
2069
2070 1) NetCDF is correctly installed for this compiler and
2071 2) the LIBS variable (within the "optfile") specifies the correct
2072 NetCDF library to link against.
2073
2074 Due to this failure, the "mnc" package is now DISABLED.
2075 *********************************************************************
2076 EOF
2077 PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
2078 DISABLE="$DISABLE mnc"
2079 else
2080 # this prevent to add mnc (due to pdepend rules) if not available
2081 DISABLE="$DISABLE mnc"
2082 fi
2083 else
2084 # we have NetCDF, we try to build MNC template files
2085 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
2086 RETVAL=$?
2087 if test "x${RETVAL}" = x0 ; then
2088 rm -f make_mnc.errors
2089 else
2090 echo "Error: problem encountered while building source files in pkg/mnc:"
2091 cat make_mnc.errors 1>&2
2092 if test "x$mnc_in" = x0 ; then
2093 exit 1
2094 else
2095 DISABLE="$DISABLE mnc"
2096 fi
2097 fi
2098 fi
2099
2100 # Check for package PROFILES: if NetCDF is not available,
2101 # then delete profiles from the list of available packages.
2102 if test "x$HAVE_NETCDF" != xt ; then
2103 echo " $PACKAGES " | grep ' profiles ' > /dev/null 2>&1
2104 RETVAL=$?
2105 if test "x$RETVAL" = x0 ; then
2106 cat <<EOF
2107 *********************************************************************
2108 WARNING: the "profiles" package was enabled but tests failed to
2109 compile NetCDF applications. Please check that:
2110
2111 1) NetCDF is correctly installed for this compiler and
2112 2) the LIBS variable (within the "optfile") specifies the correct
2113 NetCDF library to link against.
2114
2115 Due to this failure, the "profiles" package is now DISABLED.
2116 *********************************************************************
2117 EOF
2118 PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2119 DISABLE="$DISABLE profiles"
2120 else
2121 # this prevent to add profiles (due to pdepend rules) if not available
2122 DISABLE="$DISABLE profiles"
2123 fi
2124 fi
2125
2126 if test "x${PKG_DEPEND}" != x ; then
2127 echo " applying package dependency rules"
2128 ck=
2129 while test "x$ck" != xtt ; do
2130 i=0
2131 # rtot=${#PNAME[@]}
2132 rtot=$nname
2133 while test $i -le $rtot ; do
2134
2135 # Is $pname in the current $PACKAGES list?
2136 # pname=${PNAME[$i]}
2137 tmp="pname=\"\$PNAME_$i\""
2138 eval $tmp
2139 pin="f"
2140 for p in $PACKAGES ; do
2141 if test "x$p" = "x$pname" ; then
2142 pin="t"
2143 fi
2144 done
2145 # or in the current $STANDARDDIRS list?
2146 for p in $STANDARDDIRS ; do
2147 if test "x$p" = "x$pname" ; then pin="t" ; fi
2148 done
2149
2150 # Is the DNAME entry a (+) or (-) rule ?
2151 tmp="dname=\"\$DNAME_$i\""
2152 eval $tmp
2153 plus="-"
2154 echo $dname | grep '^+' > /dev/null 2>&1
2155 RETVAL=$?
2156 if test "x$RETVAL" = x0 ; then
2157 plus="+"
2158 fi
2159
2160 # Is $dname in the current $PACKAGES list?
2161 dname=`echo $dname | sed -e 's/^[+-]//'`
2162 din="f"
2163 for p in $PACKAGES ; do
2164 if test "x$p" = "x$dname" ; then
2165 din="t"
2166 fi
2167 done
2168
2169 # Do we need to add $dname according to the dependency rules?
2170 if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2171 #echo " " $pname ": need to add :" $dname
2172 in_dis="f"
2173 for dis in $DISABLE ; do
2174 if test "x$dis" = "x$dname" ; then
2175 in_dis="t"
2176 fi
2177 done
2178 if test "x$in_dis" = xt ; then
2179 echo "Error: can't satisfy package dependencies:"
2180 echo " \"$dname\" is required by the dependency rules"
2181 echo " but is disallowed by the DISABLE settings"
2182 exit 1
2183 else
2184 PACKAGES="$PACKAGES $dname"
2185 ck=
2186 fi
2187 fi
2188
2189 # Do we need to get rid of $dname according to the dependency rules?
2190 if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
2191 echo "Error: can't satisfy package dependencies:"
2192 echo " \"$pname\" was requested but is disallowed by"
2193 echo " the dependency rules for \"$dname\""
2194 exit 1
2195 fi
2196 i=`echo "$i + 1" | bc -l`
2197 #i=$(( $i + 1 ))
2198 done
2199 ck=$ck"t"
2200 done
2201 echo " packages are: $PACKAGES"
2202 fi
2203 for i in $PACKAGES ; do
2204 adr="$ROOTDIR/pkg/$i"
2205 if test -d $adr ; then
2206 SOURCEDIRS="$SOURCEDIRS $adr"
2207 INCLUDEDIRS="$INCLUDEDIRS $adr"
2208 if test "x$i" = xautodiff ; then
2209 AUTODIFF_PKG_USED=t
2210 fi
2211 else
2212 echo "Error: the directory \"$adr\" for package $i doesn't exist"
2213 exit 1
2214 fi
2215 done
2216
2217 # Create a list of #define and #undef to enable/disable packages
2218 PACKAGES_DOT_H=PACKAGES_CONFIG.h
2219 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2220 # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2221 # file would eventually be split up so that all package-related #define
2222 # statements could be separated and handled only by genmake.
2223 names=`ls -1 "$ROOTDIR/pkg"`
2224 all_pack=
2225 DISABLED_PACKAGES=
2226 for n in $names ; do
2227 if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2228 has_pack="f"
2229 for pack in $PACKAGES ; do
2230 if test "x$pack" = "x$n" ; then
2231 has_pack="t"
2232 break
2233 fi
2234 done
2235 if test "x$has_pack" = xf ; then
2236 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2237 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2238 fi
2239 fi
2240 done
2241 ENABLED_PACKAGES=
2242 for i in $PACKAGES ; do
2243 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2244 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2245 #eh3 DEFINES="$DEFINES -D$def"
2246
2247 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2248 case $i in
2249 aim_v23)
2250 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2251 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2252 ;;
2253 esac
2254 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2255
2256 done
2257
2258 echo " Adding STANDARDDIRS='$STANDARDDIRS'"
2259 BUILDDIR=${BUILDDIR:-.}
2260 if test "x$STANDARDDIRS" != x ; then
2261 for d in $STANDARDDIRS ; do
2262 adr="$ROOTDIR/$d/src"
2263 if test ! -d $adr ; then
2264 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2265 echo " is correct and that you correctly specified the STANDARDDIRS option"
2266 exit 1
2267 else
2268 SOURCEDIRS="$SOURCEDIRS $adr"
2269 fi
2270 adr="$ROOTDIR/$d/inc"
2271 if test ! -d $adr ; then
2272 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2273 echo " is correct and that you correctly specified the STANDARDDIRS option"
2274 exit 1
2275 else
2276 INCLUDEDIRS="$INCLUDEDIRS $adr"
2277 fi
2278 done
2279 fi
2280
2281 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2282 echo " of \"#define \"-type statements that are no longer allowed:"
2283 CPP_OPTIONS=
2284 CPP_EEOPTIONS=
2285 spaths=". $INCLUDEDIRS"
2286 names=`ls -1 "$ROOTDIR/pkg"`
2287 for i in $spaths ; do
2288 try="$i/CPP_OPTIONS.h"
2289 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2290 echo " found CPP_OPTIONS=\"$try\""
2291 CPP_OPTIONS="$try"
2292 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2293 for n in $names ; do
2294 test_for_package_in_cpp_options $CPP_OPTIONS $n
2295 done
2296 fi
2297 try="$i/CPP_EEOPTIONS.h"
2298 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2299 echo " found CPP_EEOPTIONS=\"$try\""
2300 # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2301 #**** not yet enabled ****
2302 # test_for_mpi_in_cpp_eeoptions $try
2303 #**** not yet enabled ****
2304 CPP_EEOPTIONS="$try"
2305 fi
2306 done
2307 if test "x$CPP_OPTIONS" = x ; then
2308 echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2309 exit 1
2310 fi
2311
2312 # Here, we build the list of files to be "run through" the adjoint
2313 # compiler.
2314 if test -f ./adSrcFiles.tmp ; then
2315 rm -f ./adSrcFiles.tmp
2316 fi
2317 echo " Creating the list of files for the adjoint compiler."
2318 touch adSrcFiles.tmp
2319 for i in $SOURCEDIRS ; do
2320 list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2321 for j in $list_files ; do
2322 cat $i/$j >> adSrcFiles.tmp
2323 done
2324 done
2325 if test ! "x"$FS = "x.f" ; then
2326 cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f
2327 mv -f adSrcFiles.tmp_f adSrcFiles.tmp
2328 fi
2329
2330 echo
2331 echo "=== Creating the Makefile ==="
2332 echo " setting INCLUDES"
2333 for i in $INCLUDEDIRS ; do
2334 if test ! -d $i ; then
2335 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2336 fi
2337 done
2338
2339 if test ! "x$DIVA" = x ; then
2340 echo " Creating the pseudo-MPI include directory"
2341 INCLUDES="-I./mpi_headers $INCLUDES"
2342 rm -rf ./mpi_headers
2343 mkdir -p ./mpi_headers
2344
2345 if test "x$MPIINCLUDEDIR" = x ; then
2346 if test "x$MPIHOME" = x ; then
2347 MPIHOME='/usr'
2348 fi
2349 MPIINCLUDEDIR='$MPIHOME/include'
2350 fi
2351
2352 if test -r $MPIINCLUDEDIR/mpif.h ; then
2353 for i in $MPI_HEADER_FILES; do
2354 cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2355 done
2356
2357 perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2358 else
2359 echo " We cannot create a copy of mpif.h!"
2360 # exit -1
2361 fi
2362 fi
2363
2364 echo " Determining the list of source and include files"
2365 rm -rf .links.tmp
2366 mkdir .links.tmp
2367 touch .links.tmp/foo
2368 if test ! -r ".links.tmp/foo" ; then
2369 echo
2370 echo "ERROR : something is wrong with your directory permissions or"
2371 echo " your user file-creation mask (\"umask\") since creating a"
2372 echo " sub-dir, touch-ing a file within it, and then reading it is"
2373 echo " not working. Please try setting your umask to something"
2374 echo " sane such as:"
2375 echo
2376 echo " umask 0002"
2377 echo
2378 echo " and please verify that you have the proper permissions for"
2379 echo " creating sub-directories and then reading files created"
2380 echo " within them."
2381 echo
2382 exit 1
2383 fi
2384 rm -f .links.tmp/foo
2385
2386 if test "x$OPENAD" != x ; then
2387 OAD_DONT_COMPILE="/dev/null"
2388 OAD_DONT_TRANSFORM="/dev/null"
2389 OAD_KEEP_ORIGINAL="/dev/null"
2390 OAD_CB2M_FILES="/dev/null"
2391 echo " looking for dontCompile file: "
2392 for i in "." $MODS ; do
2393 if test -r $i"/dontCompile" ; then
2394 OAD_DONT_COMPILE=$i"/dontCompile"
2395 echo " found $OAD_DONT_COMPILE"
2396 break
2397 fi
2398 done
2399 echo " looking for dontTransform file: "
2400 for i in "." $MODS ; do
2401 if test -r $i"/dontTransform" ; then
2402 OAD_DONT_TRANSFORM=$i"/dontTransform"
2403 echo " found $OAD_DONT_TRANSFORM"
2404 break
2405 fi
2406 done
2407 echo " looking for keepOriginal file: "
2408 for i in "." $MODS ; do
2409 if test -r $i"/keepOriginal" ; then
2410 OAD_KEEP_ORIGINAL=$i"/keepOriginal"
2411 echo " found $OAD_KEEP_ORIGINAL"
2412 break
2413 fi
2414 done
2415 echo " looking for cb2mFiles: "
2416 for i in "." $MODS ; do
2417 if test -r $i"/cb2mFiles" ; then
2418 OAD_CB2M_FILES=$i"/cb2mFiles"
2419 echo " found $OAD_CB2M_FILES"
2420 break
2421 fi
2422 done
2423 echo " OpenAD exceptions: "
2424 fi
2425
2426 echo "# This section creates symbolic links" > srclinks.tmp
2427 echo "" >> srclinks.tmp
2428 printf 'F77_SRC_FILES = ' > F77srclist.tmp
2429 printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp
2430 printf 'C_SRC_FILES = ' > csrclist.tmp
2431 printf 'F90_SRC_FILES = ' > F90srclist.tmp
2432 printf 'H_SRC_FILES = ' > hsrclist.tmp
2433 printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp
2434 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2435 for d in $alldirs ; do
2436 deplist=
2437 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2438 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2439 if test "x$OPENAD" != x ; then
2440 sfiles=`( echo $sfiles | grep -v _cb2m\. )`
2441 fi
2442 for sf in $sfiles ; do
2443 if test ! -r ".links.tmp/$sf" ; then
2444 if test -f "$d/$sf" ; then
2445 ignore_f=f
2446 case $d/$sf in
2447 ./$PACKAGES_DOT_H)
2448 ignore_f=t
2449 ;;
2450 ./AD_CONFIG.h)
2451 ignore_f=t
2452 ;;
2453 ./FC_NAMEMANGLE.h)
2454 ignore_f=t
2455 ;;
2456 ./BUILD_INFO.h)
2457 ignore_f=t
2458 ;;
2459 ./EMBEDDED_FILES.h)
2460 ignore_f=t
2461 ;;
2462 *)
2463 # For the local directory *ONLY*,
2464 # ignore all soft-links
2465 if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2466 ignore_f=t
2467 else
2468 touch .links.tmp/$sf
2469 deplist="$deplist $sf"
2470 fi
2471 ;;
2472 esac
2473 if test "x$ignore_f" = xf ; then
2474 extn=`echo $sf | $AWK -F. '{print $NF}'`
2475 case $extn in
2476 F)
2477 echo " \\" >> F77srclist.tmp
2478 printf " $sf" >> F77srclist.tmp
2479 if test "x$OPENAD" != x ; then
2480 basename=${sf%%.F}
2481 isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp`
2482 if test -z "$isAD" ; then
2483 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}`
2484 if test -z "$toBeIgnored" ; then
2485 echo " \\" >> nonADF77srclist.tmp
2486 printf " $sf" >> nonADF77srclist.tmp
2487 else
2488 echo " not to be compiled : $sf"
2489 fi
2490 else # file is initially listed as an AD file we want to exclude it
2491 # or we want to retain the untransformed version
2492 notToBeTransformed=`egrep ^$basename'[ ]*' ${OAD_DONT_TRANSFORM}`
2493 untransformedVersionToBeKept=`egrep ^$basename'[ ]*' ${OAD_KEEP_ORIGINAL}`
2494 if test -n "$notToBeTransformed"; then
2495 echo " not to be transformed: $sf"
2496 fi
2497 if test -n "$untransformedVersionToBeKept" ; then
2498 echo " original to be kept : $sf"
2499 fi
2500 if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then
2501 echo " \\" >> nonADF77srclist.tmp
2502 printf " $sf" >> nonADF77srclist.tmp
2503 fi
2504 fi
2505 fi
2506 ;;
2507 F90)
2508 echo " \\" >> F90srclist.tmp
2509 printf " $sf" >> F90srclist.tmp
2510 ;;
2511 c)
2512 echo " \\" >> csrclist.tmp
2513 printf " $sf" >> csrclist.tmp
2514 ;;
2515 h)
2516 echo " \\" >> hsrclist.tmp
2517 printf " $sf" >> hsrclist.tmp
2518 ;;
2519 flow)
2520 echo " \\" >> ad_flow_files.tmp
2521 printf " $sf" >> ad_flow_files.tmp
2522 ;;
2523 esac
2524 fi
2525 fi
2526 fi
2527 done
2528 if test "x$deplist" != x ; then
2529 if test "$d" != "." ; then
2530 echo "" >> srclinks.tmp
2531 echo "# These files are linked from $d" >> srclinks.tmp
2532 echo "$deplist :" >> srclinks.tmp
2533 # We need to make sure that the link isn't already there.
2534 # This may happen when make thinks that a header file has to be "remade"
2535 # because a module it depends on has changed. In this case we do nothing.
2536 printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp
2537 fi
2538 fi
2539 done
2540 rm -rf .links.tmp
2541 echo "" >> F77srclist.tmp
2542 echo "" >> nonADF77srclist.tmp
2543 echo "" >> csrclist.tmp
2544 echo "" >> F90srclist.tmp
2545 echo "" >> hsrclist.tmp
2546 echo "" >> ad_flow_files.tmp
2547
2548 CMDLINE=$0
2549 for xx in "$@" ; do nw=`echo $xx | wc -w`
2550 if test $nw = '1' ; then CMDLINE="$CMDLINE $xx"
2551 else CMDLINE="$CMDLINE '$xx'" ; fi
2552 done
2553
2554 if test -f $MAKEFILE ; then
2555 mv -f $MAKEFILE "$MAKEFILE.old"
2556 fi
2557 echo " Writing makefile: $MAKEFILE"
2558 echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2559 echo "# $MACHINE" >> $MAKEFILE
2560 echo "# This makefile was generated automatically on" >> $MAKEFILE
2561 echo "# $THISDATE" >> $MAKEFILE
2562 echo "# by the command:" >> $MAKEFILE
2563 echo "# $CMDLINE" >> $MAKEFILE
2564 echo "# executed by:" >> $MAKEFILE
2565 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2566
2567 EXE_AD=$EXECUTABLE"_ad"
2568 EXE_FTL=$EXECUTABLE"_ftl"
2569 EXE_SVD=$EXECUTABLE"_svd"
2570
2571 cat >>$MAKEFILE <<EOF
2572 #
2573 # OPTFILE="$OPTFILE"
2574 #
2575 # BUILDDIR : Directory where object files are written
2576 # SOURCEDIRS : Directories containing the source (.F) files
2577 # INCLUDEDIRS : Directories containing the header-source (.h) files
2578 # EXEDIR : Directory where executable that is generated is written
2579 # EXECUTABLE : Full path of executable binary
2580 #
2581 # CPP : C-preprocessor command
2582 # INCLUDES : Directories searched for header files
2583 # DEFINES : Macro definitions for CPP
2584 # MAKEDEPEND : Dependency generator
2585 # KPP : Special preprocessor command (specific to platform)
2586 # KFLAGS : Flags for KPP
2587 # FC : Fortran compiler command
2588 # FFLAGS : Configuration/debugging options for FC
2589 # FOPTIM : Optimization options for FC
2590 # LINK : Command for link editor program
2591 # LIBS : Library flags /or/ additional optimization/debugging flags
2592
2593 ROOTDIR = ${ROOTDIR}
2594 BUILDDIR = ${BUILDDIR}
2595 SOURCEDIRS = ${SOURCEDIRS}
2596 INCLUDEDIRS = ${INCLUDEDIRS}
2597 EXEDIR = ${EXEDIR}
2598 EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2599 TOOLSDIR = ${TOOLSDIR}
2600
2601 #eh3 new defines for the adjoint work
2602 AUTODIFF = ${ROOTDIR}/pkg/autodiff
2603 EXE_AD = ${EXE_AD}
2604 EXE_FTL = ${EXE_FTL}
2605 EXE_SVD = ${EXE_SVD}
2606
2607 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2608 DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2609
2610 # These files are created by Makefile
2611 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2612 EOF
2613
2614 if test "x$EMBED_SRC" = xt ; then
2615 echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2616 else
2617 echo "EMBEDDED_FILES = " >>$MAKEFILE
2618 fi
2619
2620 cat >>$MAKEFILE <<EOF
2621 # Unix ln (link)
2622 LN = ${LN}
2623 # C preprocessor
2624 CPP = cat \$< | ${S64} | ${CPP}
2625 # Dependency generator
2626 MAKEDEPEND = ${MAKEDEPEND}
2627 # Special preprocessor (KAP on DECs, FPP on Crays)
2628 KPP = ${KPP}
2629 # Fortran compiler
2630 FC = ${FC}
2631 # Fortran compiler
2632 F90C = ${F90C}
2633 # C compiler
2634 CC = ${CC}
2635 # Link editor
2636 LINK = ${LINK} ${LDADD}
2637
2638 # Defines for CPP
2639 DEFINES = ${DEFINES}
2640 # Includes for CPP
2641 INCLUDES = ${INCLUDES}
2642 # Flags for KPP
2643 KFLAGS1 = ${KFLAGS1}
2644 KFLAGS2 = ${KFLAGS2}
2645 # Optim./debug for FC
2646 FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2647 FOPTIM = ${FOPTIM}
2648 # Optim./debug for FC
2649 F90FLAGS = ${F90FLAGS}
2650 F90OPTIM = ${F90OPTIM}
2651 F90FIXEDFORMAT = ${F90FIXEDFORMAT}
2652 # Flags for CC
2653 CFLAGS = ${CFLAGS}
2654 # Files that should not be optimized
2655 NOOPTFILES = ${NOOPTFILES}
2656 NOOPTFLAGS = ${NOOPTFLAGS}
2657 # Flags and libraries needed for linking
2658 LIBS = ${LIBS}
2659 # Name of the Mekfile
2660 MAKEFILE=${MAKEFILE}
2661
2662 EOF
2663
2664 cat F77srclist.tmp >> $MAKEFILE
2665 cat nonADF77srclist.tmp >> $MAKEFILE
2666 cat csrclist.tmp >> $MAKEFILE
2667 cat F90srclist.tmp >> $MAKEFILE
2668 cat hsrclist.tmp >> $MAKEFILE
2669 cat ad_flow_files.tmp >> $MAKEFILE
2670
2671 rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp
2672
2673 echo >> $MAKEFILE
2674
2675 # add definitions for preprocessed sources
2676 # and note that not all systems allow case sensitive extensions
2677 # hence the $FS and $FS90 here.
2678 # for fixed format f90 files we use ff90 or FF90 resp
2679 # but these are not expected to be the original source files
2680
2681 echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')' >> $MAKEFILE
2682 echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE
2683 echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE
2684 echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE
2685 echo >> $MAKEFILE
2686 echo '.SUFFIXES:' >> $MAKEFILE
2687 echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE
2688
2689 cat >>$MAKEFILE <<EOF
2690
2691 all: \$(EXECUTABLE)
2692 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2693 @echo Creating \$@ ...
2694 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2695
2696 depend:
2697 @make links
2698 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2699 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2700 -rm -f makedepend.out
2701
2702 lib: libmitgcmuv.a
2703
2704 libmitgcmuv.a: \$(OBJFILES)
2705 ar rcv libmitgcmuv.a \$(OBJFILES)
2706 ar d libmitgcmuv.a main.o
2707
2708 obj: \$(OBJFILES)
2709
2710 links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES)
2711
2712 small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
2713
2714 output.txt: \$(EXECUTABLE)
2715 @printf 'running ... '
2716 @\$(EXECUTABLE) > \$@
2717
2718 # remove most of the files that "make" generates
2719 clean:
2720 -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2721 -rm -rf *.o
2722 -rm -rf *.$FS *.flowdir
2723 -rm -rf *.f$FS90 \$(AD_CLEAN) ad_input*
2724
2725 # remove most of the files that "make" and "make depend" generate
2726 Clean:
2727 @make clean
2728 @make cleanlinks
2729 -rm -f \$(SPECIAL_FILES) f90mkdepend.log $MAKEFILE.old
2730 -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2731 -rm -f genmake_warnings genmake_errors make.log
2732
2733 # remove also the executable, files that "genmake2" generates (except Makefile)
2734 # and output from a run (plus log files from testreport)
2735 CLEAN:
2736 @make Clean
2737 -rm -f \$(EXECUTABLE) \$(EXE_AD) *.bak
2738 -rm -f $LOGFILE genmake_state genmake_*optfile
2739 -rm -f SIZE.h.mpi genmake.tr_log make.tr_log
2740 -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2741 -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2742 -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2743 -rm -f *.txt STD* *diagnostics.log datetime
2744 -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2745 -rm -rf mnc_test_*
2746
2747 makefile:
2748 $THIS_SCRIPT $G2ARGS
2749 cleanlinks:
2750 -find . -type l -exec rm {} \;
2751
2752 # Special targets (SPECIAL_FILES) which are created by make
2753 ${PACKAGES_DOT_H}:
2754 @echo Creating \$@ ...
2755 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2756 AD_CONFIG.h:
2757 @echo Creating \$@ ...
2758 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2759 FC_NAMEMANGLE.h:
2760 @echo Creating \$@ ...
2761 echo "$FC_NAMEMANGLE" > \$@
2762
2763 BUILD_INFO.h:
2764 @echo Creating \$@ ...
2765 EOF
2766
2767 test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2768 test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2769 test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2770 test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2771
2772 if test "x$EMBED_SRC" = xt ; then
2773 cat >>$MAKEFILE <<EOF
2774
2775 decode_files.o : EMBEDDED_FILES.h
2776
2777 ## \$(F77_PP_SRC_FILES)
2778 all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2779 @echo Creating \$@ ...
2780 -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2781 -rm -f all_fF.tar.gz
2782 -gzip all_fF.tar
2783
2784 EMBEDDED_FILES.h : all_fF.tar.gz
2785 @echo Creating \$@ ...
2786 -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2787
2788 EOF
2789 fi
2790
2791 cat >>$MAKEFILE <<EOF
2792
2793 # The normal chain of rules is ( .F - .$FS - .o )
2794
2795 ## This nullifies any default implicit rules concerning these two file types:
2796 ## %.o : %.F
2797
2798 .F.$FS:
2799 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2800 .$FS.o:
2801 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2802 .F.o:
2803 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2804 .F90.$FS90:
2805 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2806 .FF90.f$FS90:
2807 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2808 .$FS90.o:
2809 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2810 .f$FS90.o:
2811 cp \$< \$(basename \$<).f90
2812 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$(basename \$<).f90
2813 .c.o:
2814 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2815 .flow.flowdir:
2816 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2817
2818 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2819 .F.p:
2820 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2821 .p.$FS:
2822 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2823
2824 EOF
2825
2826 #=========================================
2827 #=== Automatic Differentiation Rules ===
2828 #=== for TAMC/TAF ======================
2829
2830 if test "x$OPENAD" = x ; then
2831
2832 cat >>$MAKEFILE <<EOF
2833
2834 TAMC = ${TAMC}
2835 TAF = ${TAF}
2836
2837 TAF_EXTRA = ${TAF_EXTRA}
2838 TAMC_EXTRA = ${TAMC_EXTRA}
2839
2840 EOF
2841
2842 ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2843 ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2844 ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2845 for i in $ad_vars ; do
2846 name=$i
2847 t1="t2=\$"`echo "$i"`
2848 eval $t1
2849 printf "%-20s = " $name >> $MAKEFILE
2850 echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2851 done
2852
2853 echo " Add the source list for AD code generation"
2854 echo >> $MAKEFILE
2855 printf "AD_FILES = " >> $MAKEFILE
2856 AD_FILES=`cat adSrcFiles.tmp`
2857 for i in $AD_FILES ; do
2858 echo " \\" >> $MAKEFILE
2859 printf " $i" >> $MAKEFILE
2860 done
2861 echo >> $MAKEFILE
2862 rm -f adSrcFiles.tmp
2863
2864 cat >>$MAKEFILE <<EOF
2865
2866 # ... AD ...
2867 adall: \$(EXE_AD)
2868 adtaf: ad_taf_output.$FS
2869 adtamc: ad_tamc_output.$FS
2870
2871 ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) \$(AD_FLOW_FILES)
2872 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2873 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2874 -rm -f ad_config.template
2875 @make \$(F77_PP_SRC_FILES)
2876 @make \$(FLOFILES)
2877 cat \$(FLOFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS
2878
2879 ad_taf_output.$FS: ad_input_code.$FS
2880 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2881 ls -l ad_input_code_ad.$FS
2882 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2883
2884 adtafonly:
2885 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2886 ls -l ad_input_code_ad.$FS
2887 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2888
2889 \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2890 \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2891
2892 ad_tamc_output.$FS: ad_input_code.$FS
2893 \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2894 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2895
2896 ad_tamc: ad_tamc_output.o \$(OBJFILES)
2897 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2898
2899 adonlyfwd:
2900 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2901
2902 adtrick:
2903 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2904
2905 # ... FTL ...
2906 ftlall: ftl_taf
2907 ftltaf: ftl_taf_output.$FS
2908 ftltamc: ftl_tamc_output.$FS
2909
2910 ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2911 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2912 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2913 -rm -f ftl_config.template
2914 @make \$(F77_PP_SRC_FILES)
2915 @make \$(AD_FLOW_FILES)
2916 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2917
2918 ftl_taf_output.$FS: ftl_input_code.$FS
2919 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2920 ls -l ftl_input_code_ftl.$FS
2921 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2922
2923 ftltafonly:
2924 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2925 ls -l ftl_input_code_ftl.$FS
2926 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2927
2928 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2929 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2930
2931 ftl_tamc_output.$FS: ftl_input_code.$FS
2932 \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2933 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2934
2935 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2936 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2937
2938 # ... SVD ...
2939 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2940 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2941 @echo "--->>> Do make svdall afterwards to compile. <<<---"
2942 svdall: svd_touch svd_taf
2943
2944 svd_taf: \$(OBJFILES)
2945 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2946
2947 @echo "--->>> Only COMPILE svd code! <<<---"
2948 @echo "--->>> Assumes you previously <<<---"
2949 @echo "--->>> did make svdtaf <<<---"
2950
2951 svd_touch:
2952 @echo "--->>> Only COMPILE svd code! <<<---"
2953 @echo "--->>> Assumes you previously <<<---"
2954 @echo "--->>> did make svdtaf <<<---"
2955 touch ad_taf_output.$FS ftl_taf_output.$FS
2956 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2957 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2958 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2959 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2960 -rm -f ftl_config.template
2961
2962 EOF
2963
2964 fi
2965
2966 #=== for OpenAD ========================
2967
2968 if test "x$OPENAD" != x ; then
2969
2970 # ============ begin OpenAD specific section ==============
2971
2972 cat >>$MAKEFILE <<EOF
2973
2974 # all the source files linked from the various locations:
2975 ALL_LINKED_FILES= \
2976 \$(F77_SRC_FILES) \
2977 \$(C_SRC_FILES) \
2978 \$(H_SRC_FILES) \
2979 \$(F90_SRC_FILES) \
2980 \$(SPECIAL_FILES)
2981
2982 ifndef OPENADROOT
2983 \$(error "Error: environment variable OPENADROOT not defined!")
2984 endif
2985
2986 ifndef XAIFSCHEMAROOT
2987 \$(error "Error: environment variable XAIFSCHEMAROOT not defined!")
2988 endif
2989
2990 ifndef XAIFBOOSTERROOT
2991 \$(error "Error: environment variable XAIFBOOSTERROOT not defined!")
2992 endif
2993
2994 EOF
2995
2996 echo " Add the source list for common block to module conversion "
2997 echo >> $MAKEFILE
2998 printf "CB2M_F90_SRC_NAMES = " >> $MAKEFILE
2999 for i in `cat ${OAD_CB2M_FILES}` ; do
3000 echo " \\" >> $MAKEFILE
3001 printf " $i" >> $MAKEFILE
3002 done
3003 echo >> $MAKEFILE
3004
3005 echo " Add the source list for AD code generation"
3006 echo >> $MAKEFILE
3007 printf "AD_FILES = " >> $MAKEFILE
3008 for i in `cat ${OAD_CB2M_FILES}` ; do
3009 echo " \\" >> $MAKEFILE
3010 printf " ${i}_mod.f$FS90" >> $MAKEFILE
3011 done
3012 AD_FILES=`cat adSrcFiles.tmp`
3013 for i in $AD_FILES ; do
3014 basename=${i%%.f}
3015 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}`
3016 if test -z "$toBeIgnored" ; then
3017 echo " \\" >> $MAKEFILE
3018 printf " $i" >> $MAKEFILE
3019 fi
3020 done
3021 echo >> $MAKEFILE
3022 rm -f adSrcFiles.tmp
3023
3024 cat >>$MAKEFILE <<EOF
3025
3026 adAll: \$(EXE_AD)
3027 .PHONY: adAll
3028
3029 CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
3030
3031 .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)
3032
3033 .PHONY: adDepend
3034 adDepend: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(addsuffix _mod.FF90, \$(CB2M_F90_SRC_NAMES)) \$(F77_SRC_FILES:.F=_cb2m.FF90)
3035 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
3036 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
3037 -rm -f makedepend.out
3038
3039 OPENAD_SUPPORT_F90_SRC_FILES = \
3040 w2f__types.F90 \
3041 OAD_active.F90 \
3042 OAD_cp.F90 \
3043 OAD_rev.F90 \
3044 OAD_tape.F90
3045
3046 OPENAD_SUPPORT_C_SRC_FILES = \
3047 iaddr.c \
3048 timeRatio.c
3049
3050 f95_test_mods.f90: \$(OPENAD_SUPPORT_F90_SRC_FILES:F90=$FS90)
3051 cat \$^ > \$@
3052
3053 f95_test.f90: all_mods.xb.x2w.w2f.pp.f$FS90 \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3054 cat \$^ > \$@
3055
3056 f95_test.out: f95_test_mods.f90 f95_test.f90
3057 f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1
3058 f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1
3059
3060 # the file included below is created by the
3061 # postProcessor and its inclusion sets the
3062 # variable POSTPROCESSEDFILES
3063 # used below. Because the file is made during
3064 # make it won't be read until the second (recursive)
3065 # invocation in the rule below
3066 -include postProcess.make
3067
3068 AD_OBJ_FILES_S1=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) \$(POSTPROCESSEDFILES:.f$FS90=.o)
3069
3070 AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o)
3071
3072 postProcess.comp: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.tag \$(AD_OBJ_FILES_S1)
3073 ifeq (\$(MAKELEVEL),0)
3074 \$(MAKE) adAll
3075 else
3076 touch \$@
3077 endif
3078
3079 \$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.comp \$(AD_OBJ_FILES_S2)
3080 ifeq (\$(MAKELEVEL),1)
3081 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS)
3082 else
3083 touch \$@
3084 endif
3085
3086 # makefile debug rule
3087 openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3088 .PHONY: openad
3089
3090 # create the module files
3091 %_mod.FF90 : %.h ../OAD_support/cb2mGetModules.csh ../OAD_support/cb2mGetModules.awk
3092 ../OAD_support/cb2mGetModules.csh $< ../OAD_support/cb2mGetModules.awk
3093
3094 # create the header files
3095 %_mod.h : %.h ../OAD_support/cb2mGetHeaders.csh ../OAD_support/cb2mGetHeaders.awk
3096 ../OAD_support/cb2mGetHeaders.csh $< ../OAD_support/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES)
3097
3098 # change everybody else to use the new module files:
3099 %_cb2m.FF90 : %.F ../OAD_support/cb2mUseModules.bash
3100 ../OAD_support/cb2mUseModules.bash $< ${MPI}
3101
3102 # makefile debug rule
3103 small_f: \$(CB2M_F90_PP_SRC_FILES)
3104 .PHONY: small_f
3105
3106 ad_output.txt: \$(EXE_AD)
3107 @printf 'linking data files ... '
3108 \$(LN) -f ../input_ad/data* ../input_ad/eedata .
3109 \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .
3110 @printf 'running ... '
3111 @./\$(EXE_AD) > \$@
3112
3113 CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90)
3114 ad_input_code.f$FS90: \$(CB2M_AD_FILES)
3115 cat \$^ > \$@
3116
3117 # strip all comments and blanks to reduce
3118 # the file size in order to reduce perl's memory requirements
3119 ad_input_code_sf.f$FS90 : ad_input_code.f$FS90
3120 cat \$^ | sed -f ../OAD_support/strip.sed | sed -f ../OAD_support/stop2print.sed > \$@
3121
3122 # mfef90 preprocessing
3123 # expand statement functions
3124 # expose mfef90 specific substring handling
3125 # add the w2f__types module
3126 ad_input_code_sf.w2f.f$FS90: ad_input_code_sf.f$FS90 mfef90 whirl2f whirl2f_be w2f__types.f90
3127 ./mfef90 -r8 -z -F -N132 \$<
3128 mv \$<.B \$(basename \$<).B
3129 ./whirl2f -openad \$(basename \$<).B
3130 cat w2f__types.f90 \$(basename \$<).w2f.f > \$@
3131
3132 # canonicalizer
3133 ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py
3134 ./preProcess.py --timing --r8 -H -S \$< -o \$@
3135
3136 # F -> WHIRL
3137 # note that the canonicalized version cuts off at col 72
3138 # doing this also for string constants which is ok as long
3139 # as we are in fixed mode and cut of exactly there.
3140 # Otherwise mfef90 patches in spaces to fill up to 72 (or 132)
3141 # characters respectively.
3142 ad_input_code_sf.w2f.pre.B: ad_input_code_sf.w2f.pre.f$FS90 mfef90
3143 ./mfef90 -r8 -z -F \$<
3144 mv \$<.B \$@
3145
3146 # WHIRL -> XAIF
3147 ad_input_code_sf.w2f.pre.xaif : ad_input_code_sf.w2f.pre.B whirl2xaif
3148 ./whirl2xaif -s -n --debug 1 -o \$@ \$<
3149
3150 # XAIF -> XAIF'
3151 ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver
3152 ./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r
3153
3154 # XAIF' -> WHIRL'
3155 ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl
3156 ./xaif2whirl --debug 1 ad_input_code_sf.w2f.pre.B \$<
3157
3158 # WHIRL' -> F'
3159 ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be
3160 ./whirl2f -FLIST:ftn_file=\$@ -openad \$<
3161
3162 # insert template directives
3163 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash
3164 ../OAD_support/insertTemplateDir.bash \$< \$@
3165
3166 PPEXTRAS=\$(wildcard ../OAD_support/ad_template.*.F) ../OAD_support/ad_inline.F
3167 # postprocess F'
3168 postProcess.tag: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 postProcess.py \$(PPEXTRAS:.F=.f)
3169 # the target is a placeholder to signal execution of the rule
3170 touch \$@
3171 # this step also creates the file postProcess.make but we cannot
3172 # name it as the target or else make will try to remake it for
3173 # the include directive above for any rule, e.g. make clean
3174 ./postProcess.py --progress --timing --outputFormat=fixed -m r -i ../OAD_support/ad_inline.f --width 4 \$<
3175
3176 # setup some links
3177 %.xsd:
3178 \$(LN) \${XAIFSCHEMAROOT}/schema/\$@ .
3179
3180 mfef90:
3181 \$(LN) \${OPEN64ROOT}/crayf90/sgi/mfef90 .
3182
3183 # link the support files:
3184 \$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES):
3185 \$(LN) ../OAD_support/\$@ .
3186
3187 whirl2xaif xaif2whirl:
3188 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3189
3190 preProcess.py postProcess.py:
3191 \$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ .
3192
3193 whirl2f whirl2f_be:
3194 \$(LN) \${OPEN64ROOT}/whirl2f/\$@ .
3195
3196 oadDriver:
3197 \$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@
3198
3199 AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp \$(PPEXTRAS:.F=.f)
3200
3201 # ============ end OpenAD specific section ==============
3202
3203 EOF
3204
3205 fi
3206
3207 #=========================================
3208
3209 if test "x$EXEHOOK" != x ; then
3210 printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
3211 fi
3212
3213 echo " Making list of \"exceptions\" that need \".p\" files"
3214 for i in $KPPFILES ; do
3215 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3216 RETVAL=$?
3217 if test "x$RETVAL" != x0 ; then
3218 echo "Error: unable to add file \"$i\" to the exceptions list"
3219 fi
3220 echo "$base.$FS: $base.p" >> $MAKEFILE
3221 done
3222
3223 echo " Making list of NOOPTFILES"
3224 for i in $NOOPTFILES ; do
3225 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3226 RETVAL=$?
3227 if test "x$RETVAL" != x0 ; then
3228 echo "Error: unable to add file \"$i\" to the exceptions list"
3229 fi
3230 echo "$base.o: $base.$FS" >> $MAKEFILE
3231 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
3232 done
3233
3234 echo " Add rules for links"
3235 cat srclinks.tmp >> $MAKEFILE
3236 rm -f srclinks.tmp
3237
3238 echo " Adding makedepend marker"
3239 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
3240
3241 printf "\n=== Done ===\n"
3242
3243 # Create special header files
3244 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
3245 if test ! -f $PACKAGES_DOT_H ; then
3246 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3247 else
3248 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
3249 RETVAL=$?
3250 if test "x$RETVAL" = x0 ; then
3251 rm -f $PACKAGES_DOT_H".tmp"
3252 else
3253 mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
3254 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3255 fi
3256 fi
3257 if test ! -f AD_CONFIG.h ; then
3258 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
3259 fi
3260
3261 # Write the "state" for future records
3262 if test "x$DUMPSTATE" = xt ; then
3263 printf "" > genmake_state
3264 for i in $gm_state ; do
3265 t1="t2=\$$i"
3266 eval $t1
3267 echo "$i='$t2'" | sed -e 's/ */ /g' >> genmake_state
3268 done
3269 fi

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