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Revision 1.223 - (show annotations) (download)
Wed Aug 10 19:39:35 2011 UTC (8 years, 3 months ago) by jmc
Branch: MAIN
Changes since 1.222: +2 -2 lines
modify the way to get the compiler version

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.222 2011/08/03 18:14:08 jmc Exp $
4 # $Name: $
5 #
6 # Makefile generator for MITgcm UV codes
7 # created by cnh 03/98
8 # adapted by aja 06/98
9 # modified by aja 01/00
10 # rewritten in bash by eh3 08/03
11
12 # Explain usage
13 usage() {
14 cat <<EOF
15
16 Usage: "$0" [OPTIONS]
17 where [OPTIONS] can be:
18
19 -help | --help | -h | --h
20 Print this help message and exit.
21
22 -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
23 -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
24 Use "NAME" as the adoptfile. By default, the file at
25 "tools/adjoint_options/adjoint_default" will be used.
26
27 -nooptfile | --nooptfile
28 -optfile NAME | --optfile NAME | -of NAME | --of NAME
29 -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
30 Use "NAME" as the optfile. By default, an attempt will be
31 made to find an appropriate "standard" optfile in the
32 tools/build_options/ directory.
33
34 -pdepend NAME | --pdepend NAME
35 -pdepend=NAME | --pdepend=NAME
36 Get package dependency information from "NAME".
37
38 -pgroups NAME | --pgroups NAME
39 -pgroups=NAME | --pgroups=NAME
40 Get the package groups information from "NAME".
41
42 -bash NAME
43 Explicitly specify the Bourne or BASH shell to use
44
45 -make NAME | -m NAME
46 --make=NAME | -m=NAME
47 Use "NAME" for the MAKE program. The default is "make" but
48 many platforms, "gmake" is the preferred choice.
49
50 -makefile NAME | -mf NAME
51 --makefile=NAME | -mf=NAME
52 Call the makefile "NAME". The default is "Makefile".
53
54 -makedepend NAME | -md NAME
55 --makedepend=NAME | -md=NAME
56 Use "NAME" for the MAKEDEPEND program.
57
58 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
59 -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
60 Specify the location of the MITgcm ROOTDIR as "NAME".
61 By default, genamke will try to find the location by
62 looking in parent directories (up to the 5th parent).
63
64 -mods NAME | --mods NAME | -mo NAME | --mo NAME
65 -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
66 Here, "NAME" specifies a list of directories that are
67 used for additional source code. Files found in the
68 "mods list" are given preference over files of the same
69 name found elsewhere.
70
71 -disable NAME | --disable NAME
72 -disable=NAME | --disable=NAME
73 Here "NAME" specifies a list of packages that we don't
74 want to use. If this violates package dependencies,
75 genamke will exit with an error message.
76
77 -enable NAME | --enable NAME
78 -enable=NAME | --enable=NAME
79 Here "NAME" specifies a list of packages that we wish
80 to specifically enable. If this violates package
81 dependencies, genamke will exit with an error message.
82
83 -standarddirs NAME | --standarddirs NAME
84 -standarddirs=NAME | --standarddirs=NAME
85 Here, "NAME" specifies a list of directories to be
86 used as the "standard" code.
87
88 -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
89 -fc=NAME | --fc=NAME
90 Use "NAME" as the fortran compiler. By default, genmake
91 will search for a working compiler by trying a list of
92 "usual suspects" such as g77, f77, etc.
93
94 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
95 Use "NAME" as the C compiler. By default, genmake
96 will search for a working compiler by trying a list of
97 "usual suspects" such as gcc, c89, cc, etc.
98
99 -use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4
100 Use "real*4" type for _RS variable (#undef REAL4_IS_SLOW)
101 *only* works if CPP_EEOPTIONS.h allows this.
102
103 -ignoretime | -ignore_time | --ignoretime | --ignore_time
104 Ignore all the "wall clock" routines entirely. This will
105 not in any way hurt the model results -- it simply means
106 that the code that checks how long the model spends in
107 various routines will give junk values.
108
109 -ts | --ts
110 Produce timing information per timestep
111 -papis | --papis
112 Produce summary MFlop/s (and IPC) with PAPI per timestep
113 -pcls | --pcls
114 Produce summary MFlop/s etc. with PCL per timestep
115 -foolad | --foolad
116 Fool the AD code generator
117 -papi | --papi
118 Performance analysis with PAPI
119 -pcl | --pcl
120 Performance analysis with PCL
121 -hpmt | --hpmt
122 Performance analysis with the HPM Toolkit
123
124 -ieee | --ieee
125 use IEEE numerics. Note that this option *only* works
126 if it is supported by the OPTFILE that is being used.
127 -devel | --devel
128 Add additional warning and debugging flags for development
129 (if supported by the OPTFILE); also switch to IEEE numerics.
130 -gsl | --gsl
131 Use GSL to control floating point rounding and precision
132
133 -mpi | --mpi
134 Include MPI header files and link to MPI libraries
135 -mpi=PATH | --mpi=PATH
136 Include MPI header files and link to MPI libraries using MPI_ROOT
137 set to PATH. i.e. Include files from \$PATH/include, link to libraries
138 from \$PATH/lib and use binaries from \$PATH/bin.
139
140 -omp | --omp
141 Activate OpenMP code + use Compiler option OMPFLAG
142 -omp=OMPFLAG | --omp=OMPFLAG
143 Activate OpenMP code + use Compiler option OMPFLAG
144
145 -es | --es | -embed-source | --embed-source
146 Embed a tarball containing the full source code
147 (including the Makefile, etc.) used to build the
148 executable [off by default]
149
150 -ds | --ds
151 Report genmake internal variables status (DUMPSTATE)
152 to file "genmake_state" (for debug purpose)
153
154 While it is most often a single word, the "NAME" variables specified
155 above can in many cases be a space-delimited string such as:
156
157 --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
158 -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
159 -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
160
161 which, depending upon your shell, may need to be single-quoted.
162
163 For more detailed genmake documentation, please see:
164
165 http://mitgcm.org/public/devel_HOWTO/
166
167 EOF
168
169 exit 1
170 }
171
172 # Search for particular CPP #cmds associated with packages
173 # usage: test_for_package_in_cpp_options CPP_file package_name
174 test_for_package_in_cpp_options() {
175 cpp_options=$1
176 pkg=$2
177 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
178 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
179 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
180 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
181 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
182 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
183 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
184 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
185 }
186
187 # Search for particular CPP #cmds associated with MPI
188 # usage: test_for_mpi_in_cpp_eeoptions CPP_file
189 test_for_mpi_in_cpp_eeoptions() {
190 cpp_options=$1
191 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
192 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
193 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
194 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
195 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
196 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
197 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
198 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
199 }
200
201 # Search for particular string in a file. Return 1 if detected, 0 if not
202 # usage: test_for_string_in_file file string
203 test_for_string_in_file() {
204 file=$1
205 strng=$2
206 grep -i "$strng" $file > /dev/null 2>&1
207 RETVAL=$?
208 if test "x${RETVAL}" = x0 ; then
209 printf "Error: In $file there is an illegal line: "
210 grep -i "$strng" $file
211 exit 99
212 fi
213 return 0
214 }
215
216 # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
217 # the package list.
218 expand_pkg_groups() {
219 new_packages=
220 if test -r $PKG_GROUPS ; then
221 cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
222 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
223 matched=0
224 for i in $PACKAGES ; do
225 line=`grep "^ *$i" ./p2.tmp`
226 RETVAL=$?
227 if test "x$RETVAL" = x0 ; then
228 matched=1
229 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
230 echo " replacing \"$i\" with:$replace"
231 new_packages="$new_packages $replace"
232 else
233 new_packages="$new_packages $i"
234 fi
235 done
236 PACKAGES=$new_packages
237 rm -f ./p[1,2].tmp
238 return $matched
239 else
240 echo "Warning: can't read package groups definition file: $PKG_GROUPS"
241 fi
242 }
243
244 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
245 # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
246 check_for_broken_Ff() {
247 # Do we have defaults for $FS and/or $FS90 ?
248 tfs=f
249 tfs9=f90
250 if test "x$FS" != x ; then
251 tfs="$FS"
252 fi
253 if test "x$FS90" != x ; then
254 tfs9="$FS90"
255 fi
256
257 # First check the ability to create a *.F/.f pair.
258 cat <<EOF >> genmake_hello.F
259 program hello
260 write(*,*) 'hi'
261 stop
262 end
263 EOF
264 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
265 RETVAL=$?
266 if test "x$RETVAL" != x0 ; then
267 if test "x$FS" = x ; then
268 FS='for'
269 FS90='fr9'
270 check_for_broken_Ff
271 else
272 cat <<EOF 2>&1
273 ERROR: Your file system cannot distinguish between *.F and *.f files
274 (fails the "cp" test) and this program cannot find a suitable
275 replacement extension. Please try a different build environment or
276 contact the <MITgcm-support@mitgcm.org> list for help.
277
278 EOF
279 exit -1
280 fi
281 return
282 fi
283 rm -f genmake_hello.*
284
285 # Check the ability of ${MAKE} and ${LN} to use the current set
286 # of extensions.
287 cat <<EOF >> genmake_hello.F
288 program hello
289 write(*,*) 'hi'
290 stop
291 end
292 EOF
293 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
294 cat <<EOF >> $MAKEFILE
295 .SUFFIXES:
296 .SUFFIXES: .$tfs .F
297 .F.$tfs:
298 $LN \$< \$@
299 EOF
300 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
301 RETVAL=$?
302 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
303 if test "x$FS" = x ; then
304 FS='for'
305 FS90='fr9'
306 check_for_broken_Ff
307 else
308 cat <<EOF 2>&1
309 ERROR: Your file system cannot distinguish between *.F and *.f files
310 (fails the "make/ln" test) and this program cannot find a suitable
311 replacement extension. Please try a different build environment or
312 contact the <MITgcm-support@mitgcm.org> list for help.
313
314 EOF
315 exit -1
316 return
317 fi
318 fi
319 rm -f genmake_hello.* $MAKEFILE
320 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
321
322 # If we make it here, use the extensions
323 FS=$tfs
324 FS90=$tfs9
325 return
326 }
327
328 look_for_makedepend() {
329
330 # The "original" makedepend is part of the Imake system that is
331 # most often distributed with XFree86 or with an XFree86 source
332 # package. As a result, many machines (eg. generic Linux) do not
333 # have a system-default "makedepend" available. For those
334 # systems, we have two fall-back options:
335 #
336 # 1) a makedepend implementation shipped with the cyrus-imapd
337 # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
338 #
339 # 2) a known-buggy xmakedpend shell script
340 #
341 # So the choices are, in order:
342 #
343 # 1) use the user-specified program
344 # 2) use a system-wide default
345 # 3) locally build and use the cyrus implementation
346 # 4) fall back to the buggy local xmakedpend script
347 #
348 echo >> $LOGFILE
349 echo "running: look_for_makedepend()" >> $LOGFILE
350 if test "x${MAKEDEPEND}" != x ; then
351 echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
352 RETVAL=$?
353 if test x"$RETVAL" = x0 ; then
354 build_cyrus_makedepend
355 RETVAL=$?
356 if test "x$RETVAL" != x0 ; then
357 echo "WARNING: unable to build cyrus-makedepend. Try 'makedepend'"
358 MAKEDEPEND=
359 fi
360 else
361 echo "${MAKEDEPEND}" | grep 'tools.xmakedepend' > /dev/null 2>&1
362 RETVAL=$?
363 if test "x$RETVAL" = x0 ; then
364 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
365 fi
366 echo " --> MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
367 fi
368 fi
369 if test "x${MAKEDEPEND}" = x ; then
370 which makedepend > /dev/null 2>&1
371 RV0=$?
372 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
373 # echo 'MAKEFILE="'$MAKEFILE'"'
374 cat <<EOF >> $MAKEFILE
375 # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
376 #
377 # Some "makedepend" implementations will die if they cannot
378 # find a Makefile -- so this file is here to gives them an
379 # empty one to find and parse.
380 EOF
381 cat <<EOF >> genmake_tc.f
382 program test
383 write(*,*) 'test'
384 stop
385 end
386 EOF
387 makedepend genmake_tc.f > /dev/null 2>&1
388 RV1=$?
389 test -f $MAKEFILE && rm -f $MAKEFILE
390 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
391 if test "x${RV0}${RV1}" = x00 ; then
392 MAKEDEPEND=makedepend
393 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
394 else
395 echo " system-default makedepend not found. Try to build cyrus-makedepend"
396 # Try to build the cyrus implementation
397 build_cyrus_makedepend
398 RETVAL=$?
399 if test "x$RETVAL" != x0 ; then
400 echo "WARNING: unable to build cyrus-makedepend. Use local xmakedepend"
401 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
402 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
403 fi
404 fi
405 fi
406 }
407
408 build_cyrus_makedepend() {
409 echo >> $LOGFILE
410 echo "running: build_cyrus_makedepend()" >> $LOGFILE
411 rm -f ./genmake_cy_md
412 (
413 cd $ROOTDIR/tools/cyrus-imapd-makedepend \
414 && ./configure > /dev/null 2>&1 \
415 && make > /dev/null 2>&1
416 if test -x ./makedepend.exe ; then
417 $LN ./makedepend.exe ./makedepend
418 fi
419 ./makedepend ifparser.c > /dev/null 2>&1 \
420 && echo "true"
421 ) > ./genmake_cy_md
422 grep true ./genmake_cy_md > /dev/null 2>&1
423 RETVAL=$?
424 rm -f ./genmake_cy_md
425 if test "x$RETVAL" = x0 ; then
426 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
427 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
428 return 0
429 else
430 echo "WARNING: fail to build cyrus-imapd-makedepend" >> $LOGFILE
431 return 1
432 fi
433 }
434
435 build_embed_encode()
436 {
437 printf " building the embed-encode utility... "
438 if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
439 if test ! -d "$ROOTDIR/tools/embed_encode" ; then
440 echo
441 echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
442 echo
443 EMBED_SRC=f
444 return 1
445 fi
446 clist="cc gcc c89 $CC"
447 for ic in $clist ; do
448 comm="$ic -o encode_files encode_files.c"
449 ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
450 RETVAL=$?
451 if test "x$RETVAL" = x0 ; then
452 echo "OK"
453 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
454 return 0
455 fi
456 done
457 echo
458 echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
459 echo " so it has been disabled"
460 echo
461 EMBED_SRC=f
462 return 1
463 fi
464 echo "OK"
465 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
466 }
467
468 # look for possible C compilers
469 look_for_C_compilers() {
470 echo >> $LOGFILE
471 echo "running: look_for_C_compilers()" >> $LOGFILE
472 rm -f ./genmake_hello.c ./genmake_hello
473 cat >> genmake_hello.c << EOF
474 #include <stdio.h>
475 int main(int argc, char **argv) {
476 printf("Hello!\n");
477 return 0;
478 }
479 EOF
480 tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
481 p_CC=
482 for c in $tmp ; do
483 COMM="$c $CFLAGS -o genmake_hello genmake_hello.c"
484 echo $COMM >> $LOGFILE
485 $COMM >> $LOGFILE 2>&1
486 RETVAL=$?
487 if test "x${RETVAL}" = x0 ; then
488 echo " $c test successful" >> $LOGFILE
489 p_CC="$p_CC $c"
490 fi
491 done
492 rm -f ./genmake_hello.c ./genmake_hello
493 if test "x${p_CC}" = x ; then
494 cat 1>&2 <<EOF
495
496 Error: No C compilers were found in your path. Please specify one using:
497
498 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
499 2) the CC or MITGCM_CC environment variables.
500
501 EOF
502 exit 1
503 else
504 echo " The possible C compilers found in your path are: $p_CC" | tee -a $LOGFILE
505 if test "x$CC" = x ; then
506 CC=`echo $p_CC | $AWK '{print $1}'`
507 echo " Setting C compiler to: "$CC
508 fi
509 fi
510 echo " --> set CC='$CC'" >> $LOGFILE
511 }
512
513 # Guess possible config options for this host
514 find_possible_optfile() {
515
516 echo >> $LOGFILE
517 echo "running: find_possible_optfile()" >> $LOGFILE
518 tmp1=`uname`"_"`uname -m`
519 tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
520 tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
521 tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
522 tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
523 tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
524 PLATFORM=$tmp3
525 echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
526 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
527 echo " The platform appears to be: $PLATFORM" | tee -a $LOGFILE
528
529 #================================================================
530 # look for possible FORTRAN compilers
531 echo " look for possible FORTRAN compilers" >> $LOGFILE
532 tmp="$MITGCM_FC $FC efc gfortran g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 g95"
533 p_FC=
534 rm -f ./genmake_hello.f
535 cat >> genmake_hello.f <<EOF
536 program hello
537 do i=1,3
538 print *, 'hello world : ', i
539 enddo
540 end
541 EOF
542 for f in $tmp ; do
543 COMM="$f -o genmake_hello genmake_hello.f"
544 echo $COMM >> $LOGFILE
545 $COMM >> $LOGFILE 2>&1
546 RETVAL=$?
547 if test "x${RETVAL}" = x0 ; then
548 echo " $f test successful" >> $LOGFILE
549 p_FC="$p_FC $f"
550 fi
551 done
552 rm -f ./genmake_hello.f ./genmake_hello
553 if test "x${p_FC}" = x ; then
554 cat 1>&2 <<EOF
555
556 Error: No Fortran compilers were found in your path. Please specify one using:
557
558 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
559 2) a command-line option (eg. "-fc NAME"), or
560 3) the FC or MITGCM_FC environment variables.
561
562 EOF
563 exit 1
564 else
565 echo " The possible FORTRAN compilers found in your path are: $p_FC" | tee -a $LOGFILE
566 fi
567
568 # Use the first of the compilers found in the current PATH
569 # that has a correctly-named optfile
570 if test "x$OPTFILE" = x -a "x$FC" = x ; then
571 for i in $p_FC ; do
572 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
573 if test -r $OPTFILE ; then
574 echo " Setting OPTFILE to: "$OPTFILE | tee -a $LOGFILE
575 break
576 fi
577 done
578 fi
579
580 if test "x$OPTFILE" = x ; then
581 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
582 if test ! -r $OPTFILE ; then
583 echo " I looked for the file "$OPTFILE" but did not find it"
584 fi
585 fi
586
587 if test "x$OPTFILE" = x ; then
588 cat 1>&2 <<EOF
589
590 Error: No options file was found in: $ROOTDIR/tools/build_options/
591 that matches this platform ("$PLATFORM") and the compilers found in
592 your path. Please specify an "optfile" using:
593
594 1) the command line (eg. "-optfile=path/to/OPTFILE"), or
595 2) the MITGCM_OF environment variable.
596
597 If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
598
599 EOF
600 exit 1
601 fi
602
603 # # look for possible MPI libraries
604 # mpi_libs=
605 # mpi_fort=`which mpif77 2>/dev/null`
606 # RETVAL=$?
607 # if test "x${RETVAL}" = x0 ; then
608 # cat >>test.f <<EOF
609 # PROGRAM HELLO
610 # DO 10, I=1,10
611 # PRINT *,'Hello World'
612 # 10 CONTINUE
613 # STOP
614 # END
615 # EOF
616 # eval "$mpi_fort -showme test.f > out"
617 # RETVAL=$?
618 # if test "x${RETVAL}" = x0 ; then
619 # a=`cat out`
620 # for i in $a ; do
621 # case $i in
622 # -*)
623 # mpi_libs="$mpi_libs $i" ;;
624 # esac
625 # done
626 # echo "The MPI libs appear to be:"
627 # echo " "$mpi_libs
628 # fi
629 # rm -f test.f out
630 # fi
631 }
632
633 # Parse the package dependency information
634 get_pdepend_list() {
635
636 # strip the comments and then convert the dependency file into
637 # two arrays: PNAME, DNAME
638 cat $1 | sed -e 's/#.*$//g' \
639 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
640 > ./.pd_tmp
641 RETVAL=$?
642 if test ! "x${RETVAL}" = x0 ; then
643 echo "Error: unable to parse package dependencies -- please check PKG_DEPEND=\"$1\""
644 exit 1
645 fi
646 . ./.pd_tmp
647 rm -f ./.pd_tmp
648 }
649
650 # Build a CPP macro to automate calling C routines from FORTRAN
651 get_fortran_c_namemangling() {
652
653 #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
654 if test ! "x$FC_NAMEMANGLE" = x ; then
655 return 0
656 fi
657 echo " running: get_fortran_c_namemangling()" >> $LOGFILE
658
659 default_nm="#define FC_NAMEMANGLE(X) X ## _"
660
661 cat > genmake_test.c <<EOF
662 void tcall( char * string ) { tsub( string ); }
663 EOF
664 COMM="$CC $CFLAGS -c genmake_test.c"
665 echo ' '$COMM >> $LOGFILE
666 $COMM >> $LOGFILE 2>&1
667 RETVAL=$?
668 if test "x$RETVAL" != x0 ; then
669 FC_NAMEMANGLE=$default_nm
670 cat <<EOF>> $LOGFILE
671
672 WARNING: C test compile fails
673 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
674 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
675 EOF
676 return 1
677 fi
678 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
679 RETVAL=$?
680 if test "x$RETVAL" != x0 ; then
681 FC_NAMEMANGLE=$default_nm
682 cat <<EOF>> $LOGFILE
683
684 WARNING: The "nm" command failed.
685 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
686 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
687 EOF
688 return 1
689 fi
690 cat > genmake_tcomp.$FS <<EOF
691 subroutine tcall( string )
692 character*(*) string
693 call tsub( string )
694 end
695 EOF
696 COMM="$FC $FFLAGS -c genmake_tcomp.$FS"
697 echo ' '$COMM >> $LOGFILE
698 $COMM >> $LOGFILE 2>&1
699 RETVAL=$?
700 if test "x$RETVAL" != x0 ; then
701 FC_NAMEMANGLE=$default_nm
702 cat <<EOF>> $LOGFILE
703
704 WARNING: FORTRAN test compile fails -- please see '$LOGFILE'
705 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
706 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
707 EOF
708 return 1
709 fi
710 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
711 RETVAL=$?
712 if test "x$RETVAL" != x0 ; then
713 FC_NAMEMANGLE=$default_nm
714 cat <<EOF>> $LOGFILE
715
716 WARNING: The "nm" command failed.
717 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
718 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
719 EOF
720 return 1
721 fi
722
723 c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
724 f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
725 c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
726 f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
727
728 nmangle="X"
729 if test "x$c_a" != "x$f_a" ; then
730 comm="echo x$f_a | sed -e 's|x$c_a||'"
731 a=`eval $comm`
732 nmangle="$a ## $nmangle"
733 fi
734 if test "x$c_b" != "x$f_b" ; then
735 comm="echo x$f_b | sed -e 's|x$c_b||'"
736 b=`eval $comm`
737 nmangle="$nmangle ## $b"
738 fi
739
740 FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
741
742 # cleanup the testing files
743 rm -f genmake_tcomp.* genmake_test.*
744
745 echo " --> set FC_NAMEMANGLE='$FC_NAMEMANGLE'" >> $LOGFILE
746 }
747
748 check_HAVE_CLOC() {
749 echo >> $LOGFILE
750 echo "running: check_HAVE_CLOC()" >> $LOGFILE
751 get_fortran_c_namemangling
752 cat <<EOF > genmake_tc_1.c
753 $FC_NAMEMANGLE
754 #include <stdio.h>
755 #include <stdlib.h>
756 #include <unistd.h>
757 #include <assert.h>
758 #include <sys/time.h>
759 void FC_NAMEMANGLE(cloc) ( double *curtim )
760 {
761 struct timeval tv1;
762 gettimeofday(&tv1 , (void *)NULL );
763 *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
764 *curtim = *curtim/1.E6;
765 }
766 EOF
767 COMM="$CC $CFLAGS -c genmake_tc_1.c"
768 echo $COMM >> $LOGFILE
769 $COMM >> $LOGFILE 2>&1
770 RET_C=$?
771 cat <<EOF > genmake_tc_2.$FS
772 program hello
773 REAL*8 wtime
774 external cloc
775 call cloc(wtime)
776 print *," HELLO WORLD", wtime
777 end
778 EOF
779 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
780 echo $COMM >> $LOGFILE
781 $COMM >> $LOGFILE 2>&1
782 RET_F=$?
783 test -x ./genmake_tc && ./genmake_tc >> $LOGFILE 2>&1
784 RETVAL=$?
785 if test "x$RETVAL" = x0 ; then
786 HAVE_CLOC=t
787 DEFINES="$DEFINES -DHAVE_CLOC"
788 fi
789 rm -f genmake_tc*
790 echo " --> set HAVE_CLOC='$HAVE_CLOC'" >> $LOGFILE
791 }
792
793 check_HAVE_SIGREG() {
794 if test ! "x$HAVE_SIGREG" = x ; then
795 return
796 fi
797 echo >> $LOGFILE
798 echo "running: check_HAVE_SIGREG()" >> $LOGFILE
799 get_fortran_c_namemangling
800 cat <<EOF > genmake_tc_1.c
801 $FC_NAMEMANGLE
802 #include <stdlib.h>
803 #include <stdio.h>
804 #include <signal.h>
805 #include <errno.h>
806 #include <ucontext.h>
807
808 int * ip;
809
810 static void killhandler(
811 unsigned int sn, siginfo_t si, struct ucontext *sc )
812 {
813 *ip = *ip + 1;
814 return;
815 }
816
817 void FC_NAMEMANGLE(sigreg) (int * aip)
818 {
819 struct sigaction s;
820 ip = aip;
821 s.sa_flags = SA_SIGINFO;
822 s.sa_sigaction = (void *)killhandler;
823 if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
824 printf("Sigaction returned error = %d\n", errno);
825 exit(0);
826 }
827 return;
828 }
829 EOF
830 COMM="$CC $CFLAGS -c genmake_tc_1.c"
831 echo $COMM >> $LOGFILE
832 $COMM >> $LOGFILE 2>&1
833 RET_C=$?
834 cat <<EOF > genmake_tc_2.$FS
835 program hello
836 integer anint
837 common /iv/ anint
838 external sigreg
839 call sigreg(anint)
840 end
841 EOF
842 cat genmake_tc_2.$FS >> $LOGFILE
843 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
844 echo $COMM >> $LOGFILE
845 $COMM >> $LOGFILE 2>&1
846 RETVAL=$?
847 if test "x$RETVAL" = x0 ; then
848 HAVE_SIGREG=t
849 DEFINES="$DEFINES -DHAVE_SIGREG"
850 fi
851 rm -f genmake_tc*
852 echo " --> set HAVE_SIGREG='$HAVE_SIGREG'" >> $LOGFILE
853 }
854
855 check_HAVE_SETRLSTK() {
856 if test "x$HAVE_SETRLSTK" = xt ; then
857 DEFINES="$DEFINES -DHAVE_SETRLSTK"
858 return
859 fi
860 if test ! "x$HAVE_SETRLSTK" = x ; then
861 return
862 fi
863 echo >> $LOGFILE
864 echo "running: check_HAVE_SETRLSTK()" >> $LOGFILE
865 get_fortran_c_namemangling
866 cat <<EOF > genmake_tc_1.c
867 $FC_NAMEMANGLE
868 #include <sys/time.h>
869 #include <sys/resource.h>
870 #include <unistd.h>
871 void FC_NAMEMANGLE(setrlstk) ()
872 {
873 struct rlimit rls;
874 rls.rlim_cur = RLIM_INFINITY;
875 rls.rlim_max = RLIM_INFINITY;
876 setrlimit(RLIMIT_STACK, &rls);
877 return;
878 }
879 EOF
880 COMM="$CC $CFLAGS -c genmake_tc_1.c"
881 echo $COMM >> $LOGFILE
882 $COMM >> $LOGFILE 2>&1
883 RET_C=$?
884 cat <<EOF > genmake_tc_2.$FS
885 program hello
886 external setrlstk
887 call setrlstk()
888 end
889 EOF
890 cat genmake_tc_2.$FS >> $LOGFILE
891 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
892 echo $COMM >> $LOGFILE
893 $COMM >> $LOGFILE 2>&1
894 RETVAL=$?
895 if test "x$RETVAL" = x0 ; then
896 HAVE_SETRLSTK=t
897 DEFINES="$DEFINES -DHAVE_SETRLSTK"
898 fi
899 rm -f genmake_tc*
900 echo " --> set HAVE_SETRLSTK='$HAVE_SETRLSTK'" >> $LOGFILE
901 }
902
903 check_HAVE_STAT() {
904 echo >> $LOGFILE
905 echo "running: check_HAVE_STAT()" >> $LOGFILE
906 get_fortran_c_namemangling
907 cat <<EOF > genmake_tc_1.c
908 $FC_NAMEMANGLE
909 #include <stdio.h>
910 #include <stdlib.h>
911 #include <unistd.h>
912 #include <sys/stat.h>
913 #include <sys/types.h>
914 void FC_NAMEMANGLE(tfsize) ( int *nbyte )
915 {
916 char name[512];
917 struct stat astat;
918
919 name[0] = 'a'; name[1] = '\0';
920 if (! stat(name, &astat))
921 *nbyte = (int)(astat.st_size);
922 else
923 *nbyte = -1;
924 }
925 EOF
926 COMM="$CC $CFLAGS -c genmake_tc_1.c"
927 echo $COMM >> $LOGFILE
928 $COMM >> genmake_tc.log 2>&1
929 RET_C=$?
930 cat <<EOF > genmake_tc_2.$FS
931 program hello
932 integer nbyte
933 call tfsize(nbyte)
934 print *," HELLO WORLD", nbyte
935 end
936 EOF
937 cat genmake_tc_2.$FS >> $LOGFILE
938 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
939 echo $COMM >> $LOGFILE
940 $COMM >> genmake_tc.log 2>&1
941 RETVAL=$?
942 if test "x$RETVAL" = x0 ; then
943 HAVE_STAT=t
944 DEFINES="$DEFINES -DHAVE_STAT"
945 fi
946 rm -f genmake_tc*
947 echo " --> set HAVE_STAT='$HAVE_STAT'" >> $LOGFILE
948 }
949
950 check_netcdf_libs() {
951 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
952 return
953 fi
954 echo >> $LOGFILE
955 echo "running: check_netcdf_libs()" >> $LOGFILE
956 cat <<EOF > genmake_tnc.F
957 program fgennc
958 #include "netcdf.inc"
959 EOF
960 if test ! "x$MPI" = x ; then
961 echo '#include "mpif.h"' >> genmake_tnc.F
962 fi
963 cat <<EOF >> genmake_tnc.F
964 integer iret, ncid, xid
965 iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
966 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
967 iret = nf_def_dim(ncid, 'X', 11, xid)
968 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
969 iret = nf_close(ncid)
970 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
971 end
972 EOF
973 echo "=== genmake_tnc.F >>>" > genmake_tnc.log
974 cat genmake_tnc.F >> genmake_tnc.log
975 echo "<<< genmake_tnc.F ===" >> genmake_tnc.log
976 RET_CPP=f
977 COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
978 echo "$COMM" >> genmake_tnc.log
979 eval $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
980 if test "x$RET_CPP" = xf ; then
981 echo " WARNING: CPP failed to pre-process the netcdf test." \
982 >> genmake_tnc.log
983 echo " Please check that \$INCLUDES is properly set." \
984 >> genmake_tnc.log
985 fi
986 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
987 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
988 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
989 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
990 RET_COMPILE=$?
991 cat genmake_tnc.log >> $LOGFILE
992
993 #EH3 Remove test program execution for machines that either disallow
994 #EH3 execution or cannot support it (eg. cross-compilers)
995 #EH3
996 #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
997 #EH3 RETVAL=$?
998 #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
999
1000 if test "x$RET_COMPILE" = x0 ; then
1001 HAVE_NETCDF=t
1002 echo "check_netcdf: successful" >> $LOGFILE
1003 else
1004 # try again with "-lnetcdf" added to the libs
1005 echo "==> try again with added '-lnetcdf'" > genmake_tnc.log
1006 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1007 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1008 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1009 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1010 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1011 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
1012 RET_COMPILE=$?
1013 echo >> $LOGFILE
1014 cat genmake_tnc.log >> $LOGFILE
1015 if test "x$RET_COMPILE" = x0 ; then
1016 LIBS="$LIBS -lnetcdf"
1017 HAVE_NETCDF=t
1018 echo "check_netcdf: successful" >> $LOGFILE
1019 else
1020 # try again with "-lnetcdff" added to the libs
1021 echo "==> try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
1022 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1023 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1024 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1025 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1026 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1027 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
1028 RET_COMPILE=$?
1029 echo >> $LOGFILE
1030 cat genmake_tnc.log >> $LOGFILE
1031 if test "x$RET_COMPILE" = x0 ; then
1032 LIBS="$LIBS -lnetcdff -lnetcdf"
1033 HAVE_NETCDF=t
1034 echo "check_netcdf: successful" >> $LOGFILE
1035 fi
1036 fi
1037 fi
1038 rm -f genmake_tnc*
1039 echo " --> set HAVE_NETCDF='$HAVE_NETCDF'" >> $LOGFILE
1040 }
1041
1042
1043 ###############################################################################
1044 # Sequential part of script starts here
1045 ###############################################################################
1046
1047 # Set defaults here
1048 COMMANDL="$0 $@"
1049
1050 PLATFORM=
1051 LN=
1052 S64=
1053 KPP=
1054 #FC=
1055 #CC=gcc
1056 #CPP=
1057 LINK=
1058 DEFINES=
1059 PACKAGES=
1060 ENABLE=
1061 DISABLE=
1062 # MAKEFILE=
1063 # MAKEDEPEND=
1064 PKG_DEPEND=
1065 PKG_GROUPS=
1066 DUMPSTATE=f
1067 OPTFILE=
1068 INCLUDES="-I. $INCLUDES"
1069 FFLAGS=
1070 FOPTIM=
1071 FEXTRAFLAGS=
1072 USE_EXTENDED_SRC=
1073 EXTENDED_SRC_FLAG=
1074 GET_FC_VERSION=
1075 CFLAGS=
1076 KFLAGS1=
1077 KFLAGS2=
1078 #LDADD=
1079 LIBS=
1080 KPPFILES=
1081 NOOPTFILES=
1082 NOOPTFLAGS=
1083 MPI=
1084 MPIPATH=
1085 OMP=
1086 OMPFLAG=
1087 USE_R4=
1088 TS=
1089 PAPIS=
1090 PCLS=
1091 FOOLAD=
1092 PAPI=
1093 PCL=
1094 HPMT=
1095 GSL=
1096 DEVEL=
1097 HAVE_TEST_L=
1098
1099 # DEFINES checked by test compilation or command-line
1100 HAVE_SYSTEM=
1101 HAVE_FDATE=
1102 FC_NAMEMANGLE=
1103 HAVE_CLOC=
1104 # HAVE_SETRLSTK=
1105 HAVE_STAT=
1106 HAVE_NETCDF=
1107 HAVE_ETIME=
1108 IGNORE_TIME=
1109
1110 MODS=
1111 TOOLSDIR=
1112 SOURCEDIRS=
1113 INCLUDEDIRS=
1114 STANDARDDIRS="USE_THE_DEFAULT"
1115
1116 G2ARGS=
1117 BASH=
1118 PWD=`pwd`
1119 test "x$MAKE" = x && MAKE=make
1120 test "x$AWK" = x && AWK=awk
1121 EMBED_SRC=
1122 THISHOST=`hostname`
1123 THISCWD=`pwd`
1124 THISDATE=`date`
1125 THISUSER=`echo $USER`
1126 THISVER=
1127 MACHINE=`uname -a`
1128 EXECUTABLE=
1129 EXEHOOK=
1130 EXEDIR=
1131 IEEE=
1132 if test "x$MITGCM_IEEE" != x ; then
1133 IEEE=$MITGCM_IEEE
1134 fi
1135 FS=
1136 FS90=
1137
1138 AUTODIFF_PKG_USED=f
1139 AD_OPTFILE=
1140 TAF=
1141 AD_TAF_FLAGS=
1142 FTL_TAF_FLAGS=
1143 SVD_TAF_FLAGS=
1144 TAF_EXTRA=
1145 TAMC=
1146 AD_TAMC_FLAGS=
1147 FTL_TAF_FLAGS=
1148 SVD_TAMC_FLAGS=
1149 TAMC_EXTRA=
1150
1151 # The following state can be set directly by command-line switches
1152 gm_s1="OPTFILE PKG_DEPEND PKG_GROUPS DISABLE ENABLE MAKEFILE MAKEDEPEND PLATFORM"
1153 gm_s2="FC CC MPI OMP USE_R4 TS PAPIS PCLS PAPI PCL HPMT IEEE DEVEL GSL FEXTRAFLAGS"
1154 gm_s3="ROOTDIR STANDARDDIRS MODS DUMPSTATE"
1155
1156 # The following state is not directly set by command-line switches
1157 gm_s4="LN S64 LINK MAKE PACKAGES INCLUDES FFLAGS FOPTIM"
1158 gm_s5="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS"
1159 gm_s6="TOOLSDIR SOURCEDIRS INCLUDEDIRS EXEDIR EXECUTABLE EXEHOOK"
1160 gm_s7="PWD THISHOST THISUSER THISDATE THISVER MACHINE"
1161 gm_s8="FC_NAMEMANGLE HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME"
1162
1163 # The following are all related to adjoint/tangent-linear stuff
1164 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1165 gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1166 gm_s12="TAF_EXTRA TAMC_EXTRA"
1167
1168 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7 $gm_s8"
1169 gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1170
1171 cat <<EOF
1172
1173 GENMAKE :
1174
1175 A program for GENerating MAKEfiles for the MITgcm project.
1176 For a quick list of options, use "genmake2 -h"
1177 or for more detail see the Developer's HOWTO manual at:
1178 http://mitgcm.org/public/docs.html
1179
1180 EOF
1181
1182 LOGFILE="genmake.log"
1183 #- clean-up previous genmake logfiles:
1184 rm -f genmake_state genmake_*optfile $LOGFILE
1185
1186 echo "=== Processing options files and arguments ==="
1187 gm_local="genmake_local"
1188 printf " getting local config information: "
1189 if test -f $gm_local ; then
1190 echo "using $gm_local"
1191 . $gm_local
1192 # echo "DISABLE=$DISABLE"
1193 # echo "ENABLE=$ENABLE"
1194 else
1195 echo "none found"
1196 fi
1197
1198 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1199 #parse_options
1200 ac_prev=
1201 for ac_option in "$@" ; do
1202
1203 G2ARGS="$G2ARGS \"$ac_option\""
1204
1205 # If the previous option needs an argument, assign it.
1206 if test -n "$ac_prev"; then
1207 eval "$ac_prev=\$ac_option"
1208 ac_prev=
1209 continue
1210 fi
1211
1212 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1213
1214 case $ac_option in
1215
1216 -help | --help | -h | --h)
1217 usage ;;
1218
1219 -nooptfile | --nooptfile)
1220 OPTFILE="NONE" ;;
1221 -optfile | --optfile | -of | --of)
1222 ac_prev=OPTFILE ;;
1223 -optfile=* | --optfile=* | -of=* | --of=*)
1224 OPTFILE=$ac_optarg ;;
1225
1226 -adoptfile | --adoptfile | -adof | --adof)
1227 ac_prev=AD_OPTFILE ;;
1228 -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1229 AD_OPTFILE=$ac_optarg ;;
1230
1231 -pdepend | --pdepend)
1232 ac_prev=PKG_DEPEND ;;
1233 -pdepend=* | --pdepend=*)
1234 PKG_DEPEND=$ac_optarg ;;
1235
1236 -pgroups | --pgroups)
1237 ac_prev=PKG_GROUPS ;;
1238 -pgroups=* | --pgroups=*)
1239 PKG_GROUPS=$ac_optarg ;;
1240
1241 -make | --make | -m | --m)
1242 ac_prev=MAKE ;;
1243 -make=* | --make=* | -m=* | --m=*)
1244 MAKE=$ac_optarg ;;
1245
1246 -bash | --bash)
1247 ac_prev=BASH ;;
1248 -bash=* | --bash=*)
1249 BASH=$ac_optarg ;;
1250
1251 -makedepend | --makedepend | -md | --md)
1252 ac_prev=MAKEDEPEND ;;
1253 -makedepend=* | --makedepend=* | -md=* | --md=*)
1254 MAKEDEPEND=$ac_optarg ;;
1255
1256 -makefile | --makefile | -ma | --ma)
1257 ac_prev=MAKEFILE ;;
1258 -makefile=* | --makefile=* | -ma=* | --ma=*)
1259 MAKEFILE=$ac_optarg ;;
1260
1261 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1262 echo "ERROR: The platform option has been removed. Please specify"
1263 echo " the build options using the \"optfile\" mechanism."
1264 echo
1265 usage
1266 ;;
1267
1268 -rootdir | --rootdir | -rd | --rd)
1269 ac_prev=ROOTDIR ;;
1270 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1271 ROOTDIR=$ac_optarg ;;
1272
1273 -mods | --mods | -mo | --mo)
1274 ac_prev=MODS ;;
1275 -mods=* | --mods=* | -mo=* | --mo=*)
1276 MODS=$ac_optarg ;;
1277
1278 -disable | --disable)
1279 ac_prev=DISABLE ;;
1280 -disable=* | --disable=*)
1281 DISABLE=$ac_optarg ;;
1282
1283 -enable | --enable)
1284 ac_prev=ENABLE ;;
1285 -enable=* | --enable=*)
1286 ENABLE=$ac_optarg ;;
1287
1288 -standarddirs | --standarddirs)
1289 ac_prev=STANDARDDIRS ;;
1290 -standarddirs=* | --standarddirs=*)
1291 STANDARDDIRS=$ac_optarg ;;
1292
1293 # -cpp | --cpp)
1294 # ac_prev=cpp ;;
1295 # -cpp=* | --cpp=*)
1296 # CPP=$ac_optarg ;;
1297
1298 -cc | --cc)
1299 ac_prev=CC ;;
1300 -cc=* | --cc=*)
1301 CC=$ac_optarg ;;
1302
1303 -fortran | --fortran | -fc | --fc)
1304 ac_prev=FC ;;
1305 -fc=* | --fc=*)
1306 FC=$ac_optarg ;;
1307
1308 -fs | --fs)
1309 ac_prev=FS ;;
1310 -fs=* | --fs=*)
1311 FS=$ac_optarg ;;
1312
1313 -fs90 | --fs90)
1314 ac_prev=FS90 ;;
1315 -fs90=* | --fs90=*)
1316 FS90=$ac_optarg ;;
1317
1318 -use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4 )
1319 USE_R4=true ;;
1320
1321 -ieee | --ieee)
1322 IEEE=true ;;
1323 -noieee | --noieee)
1324 echo "Warning: ignore option '$ac_option' (default is already without '-ieee')" ;;
1325 -devel | --devel)
1326 IEEE=true ; DEVEL=true ;;
1327 -gsl | --gsl)
1328 GSL=true ;;
1329
1330 -ts | --ts)
1331 TS=true ;;
1332 -papis | --papis)
1333 PAPIS=true ;;
1334 -pcls | --pcls)
1335 PCLS=true ;;
1336 -foolad | --foolad)
1337 FOOLAD=true ;;
1338 -papi | --papi)
1339 PAPI=true ;;
1340 -pcl | --pcl)
1341 PCL=true ;;
1342 -hpmt | --hpmt)
1343 HPMT=true ;;
1344
1345 -mpi | --mpi)
1346 MPI=true ;;
1347 -mpi=* | --mpi=*)
1348 MPIPATH=$ac_optarg
1349 MPI=true ;;
1350
1351 -omp | --omp)
1352 OMP=true ;;
1353 -omp=* | --omp=*)
1354 OMPFLAG=$ac_optarg
1355 OMP=true ;;
1356
1357 -ds | --ds)
1358 DUMPSTATE=t ;;
1359
1360 -extra_flag | --extra_flag)
1361 ac_prev=FEXTRAFLAGS ;;
1362 -extra_flag=* | --extra_flag=*)
1363 FEXTRAFLAGS=$ac_optarg ;;
1364
1365 -taf_extra | --taf_extra)
1366 ac_prev=TAF_EXTRA ;;
1367 -taf_extra=* | --taf_extra=*)
1368 TAF_EXTRA=$ac_optarg ;;
1369
1370 -tamc_extra | --tamc_extra)
1371 ac_prev=TAMC_EXTRA ;;
1372 -tamc_extra=* | --tamc_extra=*)
1373 TAMC_EXTRA=$ac_optarg ;;
1374
1375 -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1376 IGNORE_TIME="-DIGNORE_TIME" ;;
1377
1378 -es | --es | -embed-source | --embed-source)
1379 EMBED_SRC=t ;;
1380
1381 -*)
1382 echo "Error: unrecognized option: "$ac_option
1383 usage
1384 ;;
1385
1386 *)
1387 echo "Error: unrecognized argument: "$ac_option
1388 usage
1389 ;;
1390
1391 esac
1392
1393 done
1394
1395 if test -f ./.genmakerc ; then
1396 echo
1397 echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1398 echo " file. This file format is no longer supported. For directions on"
1399 echo " how to setup and use the new \"genmake2\" script, please see:"
1400 echo " http://mitgcm.org/public/devel_HOWTO/"
1401 echo " and send an email to MITgcm-support@mitgcm.org if you need help."
1402 echo "WARNING: ignore \"./.genmakerc\" and continue."
1403 echo
1404 fi
1405
1406 # Find the MITgcm ${ROOTDIR}
1407 if test "x${ROOTDIR}" = x ; then
1408 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1409 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1410 ROOTDIR=".."
1411 else
1412 for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1413 if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1414 ROOTDIR=$d
1415 printf "Warning: ROOTDIR was not specified ;"
1416 echo " try using a local copy of MITgcm found at \"$ROOTDIR\""
1417 break
1418 fi
1419 done
1420 fi
1421 fi
1422 if test "x${ROOTDIR}" = x ; then
1423 echo "Error: Cannot determine ROOTDIR for MITgcm code."
1424 echo " Please specify a ROOTDIR using either an options "
1425 echo " file or a command-line option."
1426 exit 1
1427 fi
1428 if test ! -d ${ROOTDIR} ; then
1429 echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1430 exit 1
1431 fi
1432
1433 # Find the MITgcm ${THISVER}
1434 version_file="${ROOTDIR}/doc/tag-index"
1435 if test -f $version_file ; then
1436 THISVER=`$AWK '/^checkpoint/{print $1; exit}' $version_file`
1437 #- remove ./BUILD_INFO.h file if older than version_file
1438 if test -f ./BUILD_INFO.h -a ./BUILD_INFO.h -ot $version_file ; then
1439 echo " remove ./BUILD_INFO.h (older than ${version_file})"
1440 rm -f ./BUILD_INFO.h
1441 fi
1442 fi
1443
1444 if test "x$MAKEFILE" = x ; then
1445 MAKEFILE="Makefile"
1446 fi
1447
1448 echo " getting OPTFILE information:"
1449 if test "x${OPTFILE}" = x ; then
1450 if test "x$MITGCM_OF" = x ; then
1451 echo "Warning: no OPTFILE specified so we'll look for possible settings"
1452 printf "\n=== Searching for possible settings for OPTFILE ===\n"
1453 find_possible_optfile
1454 else
1455 OPTFILE=$MITGCM_OF
1456 fi
1457 fi
1458 if test "x$OPTFILE" != xNONE ; then
1459 if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1460 echo " using OPTFILE=\"$OPTFILE\""
1461 . "$OPTFILE"
1462 RETVAL=$?
1463 if test "x$RETVAL" != x0 ; then
1464 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1465 echo "--please check that variable syntax is bash-compatible"
1466 exit 1
1467 fi
1468 if test "x$DUMPSTATE" = xt ; then
1469 cp -f $OPTFILE "genmake_optfile"
1470 fi
1471 else
1472 echo "Error: can't read OPTFILE=\"$OPTFILE\""
1473 exit 1
1474 fi
1475 fi
1476
1477 echo " getting AD_OPTFILE information:"
1478 if test "x${AD_OPTFILE}" = x ; then
1479 if test "x$MITGCM_AD_OF" = x ; then
1480 AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1481 else
1482 AD_OPTFILE=$MITGCM_AD_OF
1483 fi
1484 fi
1485 if test "x${AD_OPTFILE}" != xNONE ; then
1486 if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1487 echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1488 . "$AD_OPTFILE"
1489 RETVAL=$?
1490 if test "x$RETVAL" != x0 ; then
1491 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1492 echo "--please check that variable syntax is bash-compatible"
1493 exit 1
1494 fi
1495 if test "x$DUMPSTATE" = xt ; then
1496 cp -f $AD_OPTFILE "genmake_ad_optfile"
1497 fi
1498 else
1499 echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1500 exit 1
1501 fi
1502 fi
1503
1504 #====================================================================
1505 # Set default values if not set by the optfile
1506 #
1507 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1508 # either set defaults or complain and abort!
1509 if test ! "x$BASH" = x ; then
1510 # add a trailing space so that it works within the Makefile syntax (see below)
1511 BASH="$BASH "
1512 fi
1513 if test "x$FC" = x ; then
1514 cat <<EOF 1>&2
1515
1516 Error: no Fortran compiler: please specify using one of the following:
1517 1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1518 2) the "-fc=XXX" command-line option
1519 3) the "./genmake_local" file
1520 EOF
1521 exit 1
1522 fi
1523 if test "x$GET_FC_VERSION" != x ; then
1524 echo "Get compiler version using: $FC $GET_FC_VERSION" >> $LOGFILE
1525 $FC $GET_FC_VERSION >> $LOGFILE 2> /dev/null
1526 echo "<-- compiler version ----" >> $LOGFILE
1527 fi
1528
1529 if test "x$CC" = x ; then
1530 look_for_C_compilers
1531 fi
1532
1533 if test "x$LINK" = x ; then
1534 LINK=$FC
1535 fi
1536 if test "x$MAKE" = x ; then
1537 MAKE="make"
1538 fi
1539 if test "x$CPP" = x ; then
1540 CPP="cpp -traditional -P"
1541 fi
1542 #EH3 === UGLY ===
1543 # The following is an ugly little hack to check for $CPP in /lib/ and
1544 # it should eventually be replaced with a more general function that
1545 # searches a combo of the user's path and a list of "usual suspects"
1546 # to find the correct location for binaries such as $CPP.
1547 for i in " " "/lib/" ; do
1548 echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1549 done
1550 #EH3 === UGLY ===
1551 echo "#define A a" | $CPP > test_cpp 2>&1
1552 RETVAL=$?
1553 if test "x$RETVAL" != x0 ; then
1554 cat <<EOF 1>&2
1555
1556 Error: C pre-processor "$CPP" failed the test case: please specify using:
1557
1558 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1559 2) the "./genmake_local" file
1560 3) with the CPP environment variable
1561
1562 EOF
1563 exit 1
1564 else
1565 rm -f test_cpp
1566 fi
1567
1568 look_for_makedepend
1569
1570 # Check that soft-link command is set and usable
1571 if test "x$LN" = x ; then
1572 LN="ln -s"
1573 fi
1574 echo "test" > genmake_test_ln
1575 $LN genmake_test_ln genmake_tlink
1576 RETVAL=$?
1577 if test "x$RETVAL" != x0 ; then
1578 cat <<EOF 1>&2
1579
1580 Error: The command "$LN" failed -- please specify a working soft-link
1581 command in the optfile.
1582
1583 EOF
1584 exit 1
1585 fi
1586 test -L genmake_tlink > /dev/null 2>&1
1587 RETVAL=$?
1588 if test "x$RETVAL" = x0 ; then
1589 HAVE_TEST_L=t
1590 fi
1591 rm -f genmake_test_ln genmake_tlink
1592
1593 # Check for broken *.F/*.f handling and fix if possible
1594 check_for_broken_Ff
1595
1596 if test ! "x$MPI" = x ; then
1597 echo " Turning on MPI cpp macros"
1598 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1599 fi
1600 if test ! "x$OMP" = x ; then
1601 echo " Add OMPFLAG and turn on OpenMP cpp macros"
1602 FFLAGS="$FFLAGS $OMPFLAG"
1603 F90FLAGS="$F90FLAGS $OMPFLAG"
1604 DEFINES="$DEFINES -DUSE_OMP_THREADING"
1605 fi
1606
1607 if test ! "x$USE_R4" = x ; then
1608 echo " Turning on LET_RS_BE_REAL4 cpp flag"
1609 DEFINES="$DEFINES -DLET_RS_BE_REAL4"
1610 fi
1611
1612 if test ! "x$TS" = x ; then
1613 echo " Turning on timing per timestep"
1614 if test ! "x$FOOLAD" = x ; then
1615 DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1616 else
1617 DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1618 fi
1619 PACKAGES="$PACKAGES showflops"
1620 fi
1621 if test ! "x$PAPIS" = x ; then
1622 echo " Turning on PAPI flop summary per timestep"
1623 echo " Please make sure PAPIINC, PAPILIB are defined"
1624 if test ! "x$FOOLAD" = x ; then
1625 DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1626 else
1627 DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1628 fi
1629 INCLUDES="$INCLUDES $PAPIINC"
1630 LIBS="$LIBS $PAPILIB"
1631 PACKAGES="$PACKAGES showflops"
1632 fi
1633 if test ! "x$PCLS" = x ; then
1634 echo " Turning on PCL counter summary per timestep"
1635 echo " Please make sure PCLINC, PCLLIB are defined"
1636 if test ! "x$FOOLAD" = x ; then
1637 DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1638 else
1639 DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1640 fi
1641 INCLUDES="$INCLUDES $PCLINC"
1642 LIBS="$LIBS $PCLLIB"
1643 PACKAGES="$PACKAGES showflops"
1644 fi
1645 if test ! "x$PAPI" = x ; then
1646 if test ! "x$PAPIS" = x ; then
1647 echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1648 echo " Sticking with PAPI flop summary per timestep!"
1649 else
1650 echo " Turning on performance analysis with PAPI"
1651 echo " Please make sure PAPIINC, PAPILIB are defined"
1652 DEFINES="$DEFINES -DUSE_PAPI"
1653 INCLUDES="$INCLUDES $PAPIINC"
1654 LIBS="$LIBS $PAPILIB"
1655 fi
1656 fi
1657 if test ! "x$PCL" = x ; then
1658 if test ! "x$PCLS" = x ; then
1659 echo " PCL performance analysis and flop summary per timestep cannot co-exist!"
1660 echo " Sticking with PCL flop summary per timestep!"
1661 else
1662 echo " Turning on performance analysis with PCL"
1663 echo " Please make sure PCLINC, PCLLIB are defined"
1664 DEFINES="$DEFINES -DUSE_PCL"
1665 INCLUDES="$INCLUDES $PCLINC"
1666 LIBS="$LIBS $PCLLIB"
1667 fi
1668 fi
1669 if test ! "x$HPMT" = x ; then
1670 if test ! "x$PAPI" = x ; then
1671 echo " PAPI and the HPM Toolkit cannot co-exist!"
1672 echo " Sticking with PAPI!"
1673 else if test ! "x$PCL" = x ; then
1674 echo " PCL and the HPM Toolkit cannot co-exist!"
1675 echo " Sticking with PCL!"
1676 else
1677 echo " Turning on performance analysis with the HPM Toolkit"
1678 echo " Please make sure HPMTINC, HPMTLIB are defined"
1679 DEFINES="$DEFINES -DUSE_LIBHPM"
1680 INCLUDES="$INCLUDES $HPMTINC"
1681 LIBS="$LIBS $HPMTLIB"
1682 fi
1683 fi
1684 fi
1685 if test ! "x$GSL" = x ; then
1686 echo " Turning on use of GSL to control floating point calculations"
1687 echo " Please make sure GSLINC, GSLLIB are defined"
1688 DEFINES="$DEFINES -DUSE_GSL_IEEE"
1689 INCLUDES="$INCLUDES $GSLINC"
1690 LIBS="$LIBS $GSLLIB"
1691 fi
1692 #- if USE_EXTENDED_SRC is set, add EXTENDED_SRC_FLAG to FFLAGS :
1693 if test ! "x$USE_EXTENDED_SRC" = x ; then
1694 FFLAGS="$FFLAGS $EXTENDED_SRC_FLAG"
1695 F90FIXEDFORMAT="$F90FIXEDFORMAT $EXTENDED_SRC_FLAG"
1696 fi
1697
1698 printf "\n=== Checking system libraries ===\n"
1699 printf " Do we have the system() command using $FC... "
1700 cat > genmake_tcomp.$FS <<EOF
1701 program hello
1702 call system('echo hi')
1703 end
1704 EOF
1705 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1706 RETVAL=$?
1707 if test "x$RETVAL" = x0 ; then
1708 HAVE_SYSTEM=t
1709 DEFINES="$DEFINES -DHAVE_SYSTEM"
1710 echo "yes"
1711 else
1712 HAVE_SYSTEM=
1713 echo "no"
1714 fi
1715 rm -f genmake_tcomp*
1716
1717 printf " Do we have the fdate() command using $FC... "
1718 cat > genmake_tcomp.$FS <<EOF
1719 program hello
1720 CHARACTER*(128) string
1721 string = ' '
1722 call fdate( string )
1723 print *, string
1724 end
1725 EOF
1726 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1727 RETVAL=$?
1728 if test "x$RETVAL" = x0 ; then
1729 HAVE_FDATE=t
1730 DEFINES="$DEFINES -DHAVE_FDATE"
1731 echo "yes"
1732 else
1733 HAVE_FDATE=
1734 echo "no"
1735 fi
1736 rm -f genmake_tcomp*
1737
1738 printf " Do we have the etime() command using $FC... "
1739 cat > genmake_tcomp.$FS <<EOF
1740 program hello
1741 REAL*4 ACTUAL, TARRAY(2)
1742 EXTERNAL ETIME
1743 REAL*4 ETIME
1744 actual = etime( tarray )
1745 print *, tarray
1746 end
1747 EOF
1748 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1749 RETVAL=$?
1750 if test "x$RETVAL" = x0 ; then
1751 HAVE_ETIME=t
1752 DEFINES="$DEFINES -DHAVE_ETIME"
1753 echo "yes"
1754 else
1755 HAVE_ETIME=
1756 echo "no"
1757 fi
1758 rm -f genmake_tcomp*
1759
1760 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1761 check_HAVE_CLOC
1762 if test "x$HAVE_CLOC" != x ; then
1763 echo "yes"
1764 else
1765 echo "no"
1766 if test "x$EMBED_SRC" = xt ; then
1767 echo " WARNING: you requested file embedding but it has"
1768 echo " been disabled since C code cannot be called"
1769 EMBED_SRC=
1770 fi
1771 fi
1772 rm -f genmake_t*
1773
1774 printf " Can we unlimit the stack size using $FC... "
1775 check_HAVE_SETRLSTK
1776 if test "x$HAVE_SETRLSTK" = xt ; then
1777 echo "yes"
1778 else
1779 echo "no"
1780 fi
1781 rm -f genmake_t*
1782
1783 printf " Can we register a signal handler using $FC... "
1784 check_HAVE_SIGREG
1785 if test "x$HAVE_SIGREG" = xt ; then
1786 echo "yes"
1787 else
1788 echo "no"
1789 fi
1790 rm -f genmake_t*
1791
1792 printf " Can we use stat() through C calls... "
1793 check_HAVE_STAT
1794 if test "x$HAVE_STAT" != x ; then
1795 echo "yes"
1796 else
1797 echo "no"
1798 fi
1799 rm -f genmake_t*
1800
1801 printf " Can we create NetCDF-enabled binaries... "
1802 check_netcdf_libs
1803 if test "x$HAVE_NETCDF" != x ; then
1804 echo "yes"
1805 else
1806 echo "no"
1807 fi
1808 DEFINES="$DEFINES $IGNORE_TIME"
1809
1810 if test "x$EMBED_SRC" = xt ; then
1811 build_embed_encode
1812 fi
1813 if test "x$EMBED_SRC" = xt ; then
1814 ENABLE="$ENABLE embed_files"
1815 fi
1816
1817 printf "\n=== Setting defaults ===\n"
1818 printf " Adding MODS directories: "
1819 for d in $MODS ; do
1820 if test ! -d $d ; then
1821 echo
1822 echo "Error: MODS directory \"$d\" not found!"
1823 exit 1
1824 else
1825 printf "$d "
1826 SOURCEDIRS="$SOURCEDIRS $d"
1827 INCLUDEDIRS="$INCLUDEDIRS $d"
1828 fi
1829 done
1830 echo
1831
1832 #if test "x${PLATFORM}" = x ; then
1833 # PLATFORM=$p_PLATFORM
1834 #fi
1835
1836 if test "x${EXEDIR}" = x ; then
1837 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1838 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1839 EXEDIR=../exe
1840 else
1841 EXEDIR=.
1842 fi
1843 fi
1844 if test ! -d ${EXEDIR} ; then
1845 echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1846 exit 1
1847 fi
1848
1849 if test "x${TOOLSDIR}" = x ; then
1850 TOOLSDIR="$ROOTDIR/tools"
1851 fi
1852 if test ! -d ${TOOLSDIR} ; then
1853 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1854 exit 1
1855 fi
1856 if test "x$S64" = x ; then
1857 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1858 RETVAL=$?
1859 if test "x${RETVAL}" = x0 ; then
1860 S64='$(TOOLSDIR)/set64bitConst.sh'
1861 else
1862 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1863 RETVAL=$?
1864 if test "x${RETVAL}" = x0 ; then
1865 S64='$(TOOLSDIR)/set64bitConst.csh'
1866 else
1867 cat <<EOF
1868
1869 ERROR: neither of the two default scripts:
1870
1871 ${TOOLSDIR}/set64bitConst.sh
1872 ${TOOLSDIR}/set64bitConst.csh
1873
1874 are working so please check paths or specify (with \$S64) a
1875 working version of this script.
1876
1877 EOF
1878 exit 1
1879 fi
1880 fi
1881 fi
1882 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1883
1884 EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1885
1886 # Set Standard Code Directories:
1887 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1888 STANDARDDIRS="eesupp model"
1889 fi
1890 # if model in Standard-Code-Dir, add eesupp (needed to compile model)
1891 echo " $STANDARDDIRS " | grep ' model ' > /dev/null 2>&1
1892 ckM=$?
1893 echo " $STANDARDDIRS " | grep ' eesupp ' > /dev/null 2>&1
1894 ckE=$?
1895 if test $ckM = 0 -a $ckE = 1 ; then
1896 STANDARDDIRS="$STANDARDDIRS eesupp"
1897 fi
1898
1899 # We have a special set of source files in eesupp/src which are
1900 # generated from some template source files. We'll make them first so
1901 # they appear as regular source code
1902 if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1903 echo " Making source files in eesupp from templates"
1904 ( cd $ROOTDIR"/eesupp/src/" && $MAKE clean_old && $MAKE \
1905 ) > make_eesupp.errors 2>&1
1906 RETVAL=$?
1907 if test "x${RETVAL}" = x0 ; then
1908 rm -f make_eesupp.errors
1909 else
1910 echo "Error: problem encountered while building source files in eesupp:"
1911 cat make_eesupp.errors 1>&2
1912 exit 1
1913 fi
1914 fi
1915
1916 #same for pkg/exch2 and pkg/regrid
1917 for pdir in exch2 regrid ; do
1918 if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1919 echo " Making source files in pkg/${pdir} from templates"
1920 ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE clean_old && $MAKE \
1921 ) > make_${pdir}.errors 2>&1
1922 RETVAL=$?
1923 if test "x${RETVAL}" = x0 ; then
1924 rm -f make_${pdir}.errors
1925 else
1926 echo "Error: problem encountered while building source files in pkg/${pdir}:"
1927 cat make_${pdir}.errors 1>&2
1928 exit 1
1929 fi
1930 fi
1931 done
1932
1933 printf "\n=== Determining package settings ===\n"
1934 if test "x${PKG_DEPEND}" = x ; then
1935 tmp=$ROOTDIR"/pkg/pkg_depend"
1936 if test -r $tmp ; then PKG_DEPEND=$tmp ; fi
1937 fi
1938 if test "x${PKG_DEPEND}" = x ; then
1939 echo "Warning: No package dependency information was specified."
1940 echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1941 else
1942 if test ! -r ${PKG_DEPEND} ; then
1943 echo "Error: can't read package dependency info from PKG_DEPEND=\"$PKG_DEPEND\""
1944 exit 1
1945 fi
1946 echo " getting package dependency info from $PKG_DEPEND"
1947 # Strip the comments and then convert the dependency file into arrays: PNAME, DNAME
1948 get_pdepend_list $PKG_DEPEND
1949 fi
1950
1951 # A default package groups file "$ROOTDIR/pkg/pkg_groups" is provided
1952 # to define the "default_pkg_list" and package groups (for convenience, one
1953 # can specify a group of packages using names like "ocean" and "atmosphere").
1954 if test "x${PKG_GROUPS}" = x ; then
1955 tmp=$ROOTDIR"/pkg/pkg_groups"
1956 if test -r $tmp ; then PKG_GROUPS=$tmp ; fi
1957 fi
1958 if test "x${PKG_GROUPS}" = x ; then
1959 echo "Warning: No package groups information was specified."
1960 echo " Please check that ROOTDIR/pkg/pkg_groups exists."
1961 else
1962 if test ! -r ${PKG_GROUPS} ; then
1963 echo "Error: can't read package groups info from PKG_GROUPS=\"$PKG_GROUPS\""
1964 exit 1
1965 fi
1966 echo " getting package groups info from $PKG_GROUPS"
1967 fi
1968
1969 # Search for packages to compile.
1970 echo " checking list of packages to compile:"
1971 PKG_LIST=
1972 if test "x${PKG_LIST}" = x ; then
1973 for i in "." $MODS ; do
1974 if test -r $i"/packages.conf" ; then
1975 PKG_LIST=$i"/packages.conf"
1976 break
1977 fi
1978 done
1979 fi
1980 if test "x${PKG_LIST}" = x ; then
1981 pkg_list='default_pkg_list'
1982 if test "x${PKG_GROUPS}" = x ; then
1983 echo "Error: need package groups info to expand pkg_list=\"$pkg_list\""
1984 exit 1
1985 fi
1986 else
1987 if test ! -r $PKG_LIST ; then
1988 echo "Error: can't read package list from PKG_LIST=\"$PKG_LIST\""
1989 exit 1
1990 else
1991 echo " using PKG_LIST=\"$PKG_LIST\""
1992 # Strip the comments and add all the names
1993 pkg_list=`cat $PKG_LIST | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1994 RETVAL=$?
1995 if test "x${RETVAL}" != x0 ; then
1996 printf "Error: can't parse package list "
1997 echo "-- please check PKG_LIST=\"$PKG_LIST\""
1998 exit 1
1999 fi
2000 fi
2001 fi
2002 for i in $pkg_list ; do
2003 PACKAGES="$PACKAGES $i"
2004 done
2005 echo " before group expansion packages are:$PACKAGES"
2006 if test "x${PKG_GROUPS}" != x ; then
2007 RET=1
2008 while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
2009 echo " after group expansion packages are: $PACKAGES"
2010 fi
2011
2012 echo " applying DISABLE settings"
2013 echo "" > ./.tmp_pack
2014 for i in $PACKAGES ; do
2015 echo $i >> ./.tmp_pack
2016 done
2017 for i in `grep "-" ./.tmp_pack` ; do
2018 j=`echo $i | sed 's/[-]//'`
2019 DISABLE="$DISABLE $j"
2020 done
2021 pack=
2022 for p in $PACKAGES ; do
2023 addit="t"
2024 for d in $DISABLE ; do
2025 if test "x$p" = "x$d" ; then
2026 addit="f"
2027 fi
2028 done
2029 if test "x$addit" = xt ; then
2030 pack="$pack $p"
2031 fi
2032 done
2033 PACKAGES="$pack"
2034 echo " applying ENABLE settings"
2035 echo "" > ./.tmp_pack
2036 PACKAGES="$PACKAGES $ENABLE"
2037 # Test if each explicitly referenced package exists
2038 for i in $PACKAGES ; do
2039 j=`echo $i | sed 's/[-+]//'`
2040 if test ! -d "$ROOTDIR/pkg/$j" ; then
2041 echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'"
2042 exit 1
2043 fi
2044 echo $i >> ./.tmp_pack
2045 done
2046 PACKAGES=
2047 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
2048 PACKAGES="$PACKAGES $i"
2049 done
2050 rm -f ./.tmp_pack
2051 echo " packages are: $PACKAGES"
2052
2053 # Check for package MNC: if NetCDF is available, then build the MNC
2054 # template files ; otherwise, delete mnc from the list of packages.
2055 echo " $PACKAGES " | grep ' mnc ' > /dev/null 2>&1
2056 mnc_in=$?
2057 if test "x$HAVE_NETCDF" != xt ; then
2058 if test "x$mnc_in" = x0 ; then
2059 cat <<EOF
2060 *********************************************************************
2061 WARNING: the "mnc" package was enabled but tests failed to compile
2062 NetCDF applications. Please check that:
2063
2064 1) NetCDF is correctly installed for this compiler and
2065 2) the LIBS variable (within the "optfile") specifies the correct
2066 NetCDF library to link against.
2067
2068 Due to this failure, the "mnc" package is now DISABLED.
2069 *********************************************************************
2070 EOF
2071 PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
2072 DISABLE="$DISABLE mnc"
2073 else
2074 # this prevent to add mnc (due to pdepend rules) if not available
2075 DISABLE="$DISABLE mnc"
2076 fi
2077 else
2078 # we have NetCDF, we try to build MNC template files
2079 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
2080 RETVAL=$?
2081 if test "x${RETVAL}" = x0 ; then
2082 rm -f make_mnc.errors
2083 else
2084 echo "Error: problem encountered while building source files in pkg/mnc:"
2085 cat make_mnc.errors 1>&2
2086 if test "x$mnc_in" = x0 ; then
2087 exit 1
2088 else
2089 DISABLE="$DISABLE mnc"
2090 fi
2091 fi
2092 fi
2093
2094 # Check for package PROFILES: if NetCDF is not available,
2095 # then delete profiles from the list of available packages.
2096 if test "x$HAVE_NETCDF" != xt ; then
2097 echo " $PACKAGES " | grep ' profiles ' > /dev/null 2>&1
2098 RETVAL=$?
2099 if test "x$RETVAL" = x0 ; then
2100 cat <<EOF
2101 *********************************************************************
2102 WARNING: the "profiles" package was enabled but tests failed to
2103 compile NetCDF applications. Please check that:
2104
2105 1) NetCDF is correctly installed for this compiler and
2106 2) the LIBS variable (within the "optfile") specifies the correct
2107 NetCDF library to link against.
2108
2109 Due to this failure, the "profiles" package is now DISABLED.
2110 *********************************************************************
2111 EOF
2112 PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2113 DISABLE="$DISABLE profiles"
2114 else
2115 # this prevent to add profiles (due to pdepend rules) if not available
2116 DISABLE="$DISABLE profiles"
2117 fi
2118 fi
2119
2120 if test "x${PKG_DEPEND}" != x ; then
2121 echo " applying package dependency rules"
2122 ck=
2123 while test "x$ck" != xtt ; do
2124 i=0
2125 # rtot=${#PNAME[@]}
2126 rtot=$nname
2127 while test $i -le $rtot ; do
2128
2129 # Is $pname in the current $PACKAGES list?
2130 # pname=${PNAME[$i]}
2131 tmp="pname=\"\$PNAME_$i\""
2132 eval $tmp
2133 pin="f"
2134 for p in $PACKAGES ; do
2135 if test "x$p" = "x$pname" ; then
2136 pin="t"
2137 fi
2138 done
2139 # or in the current $STANDARDDIRS list?
2140 for p in $STANDARDDIRS ; do
2141 if test "x$p" = "x$pname" ; then pin="t" ; fi
2142 done
2143
2144 # Is the DNAME entry a (+) or (-) rule ?
2145 tmp="dname=\"\$DNAME_$i\""
2146 eval $tmp
2147 plus="-"
2148 echo $dname | grep '^+' > /dev/null 2>&1
2149 RETVAL=$?
2150 if test "x$RETVAL" = x0 ; then
2151 plus="+"
2152 fi
2153
2154 # Is $dname in the current $PACKAGES list?
2155 dname=`echo $dname | sed -e 's/^[+-]//'`
2156 din="f"
2157 for p in $PACKAGES ; do
2158 if test "x$p" = "x$dname" ; then
2159 din="t"
2160 fi
2161 done
2162
2163 # Do we need to add $dname according to the dependency rules?
2164 if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2165 #echo " " $pname ": need to add :" $dname
2166 in_dis="f"
2167 for dis in $DISABLE ; do
2168 if test "x$dis" = "x$dname" ; then
2169 in_dis="t"
2170 fi
2171 done
2172 if test "x$in_dis" = xt ; then
2173 echo "Error: can't satisfy package dependencies:"
2174 echo " \"$dname\" is required by the dependency rules"
2175 echo " but is disallowed by the DISABLE settings"
2176 exit 1
2177 else
2178 PACKAGES="$PACKAGES $dname"
2179 ck=
2180 fi
2181 fi
2182
2183 # Do we need to get rid of $dname according to the dependency rules?
2184 if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
2185 echo "Error: can't satisfy package dependencies:"
2186 echo " \"$pname\" was requested but is disallowed by"
2187 echo " the dependency rules for \"$dname\""
2188 exit 1
2189 fi
2190 i=`echo "$i + 1" | bc -l`
2191 #i=$(( $i + 1 ))
2192 done
2193 ck=$ck"t"
2194 done
2195 echo " packages are: $PACKAGES"
2196 fi
2197 for i in $PACKAGES ; do
2198 adr="$ROOTDIR/pkg/$i"
2199 if test -d $adr ; then
2200 SOURCEDIRS="$SOURCEDIRS $adr"
2201 INCLUDEDIRS="$INCLUDEDIRS $adr"
2202 if test "x$i" = xautodiff ; then
2203 AUTODIFF_PKG_USED=t
2204 fi
2205 else
2206 echo "Error: the directory \"$adr\" for package $i doesn't exist"
2207 exit 1
2208 fi
2209 done
2210
2211 # Create a list of #define and #undef to enable/disable packages
2212 PACKAGES_DOT_H=PACKAGES_CONFIG.h
2213 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2214 # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2215 # file would eventually be split up so that all package-related #define
2216 # statements could be separated and handled only by genmake.
2217 names=`ls -1 "$ROOTDIR/pkg"`
2218 all_pack=
2219 DISABLED_PACKAGES=
2220 for n in $names ; do
2221 if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2222 has_pack="f"
2223 for pack in $PACKAGES ; do
2224 if test "x$pack" = "x$n" ; then
2225 has_pack="t"
2226 break
2227 fi
2228 done
2229 if test "x$has_pack" = xf ; then
2230 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2231 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2232 fi
2233 fi
2234 done
2235 ENABLED_PACKAGES=
2236 for i in $PACKAGES ; do
2237 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2238 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2239 #eh3 DEFINES="$DEFINES -D$def"
2240
2241 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2242 case $i in
2243 aim_v23)
2244 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2245 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2246 ;;
2247 esac
2248 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2249
2250 done
2251
2252 echo " Adding STANDARDDIRS='$STANDARDDIRS'"
2253 BUILDDIR=${BUILDDIR:-.}
2254 if test "x$STANDARDDIRS" != x ; then
2255 for d in $STANDARDDIRS ; do
2256 adr="$ROOTDIR/$d/src"
2257 if test ! -d $adr ; then
2258 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2259 echo " is correct and that you correctly specified the STANDARDDIRS option"
2260 exit 1
2261 else
2262 SOURCEDIRS="$SOURCEDIRS $adr"
2263 fi
2264 adr="$ROOTDIR/$d/inc"
2265 if test ! -d $adr ; then
2266 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2267 echo " is correct and that you correctly specified the STANDARDDIRS option"
2268 exit 1
2269 else
2270 INCLUDEDIRS="$INCLUDEDIRS $adr"
2271 fi
2272 done
2273 fi
2274
2275 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2276 echo " of \"#define \"-type statements that are no longer allowed:"
2277 CPP_OPTIONS=
2278 CPP_EEOPTIONS=
2279 spaths=". $INCLUDEDIRS"
2280 names=`ls -1 "$ROOTDIR/pkg"`
2281 for i in $spaths ; do
2282 try="$i/CPP_OPTIONS.h"
2283 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2284 echo " found CPP_OPTIONS=\"$try\""
2285 CPP_OPTIONS="$try"
2286 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2287 for n in $names ; do
2288 test_for_package_in_cpp_options $CPP_OPTIONS $n
2289 done
2290 fi
2291 try="$i/CPP_EEOPTIONS.h"
2292 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2293 echo " found CPP_EEOPTIONS=\"$try\""
2294 # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2295 #**** not yet enabled ****
2296 # test_for_mpi_in_cpp_eeoptions $try
2297 #**** not yet enabled ****
2298 CPP_EEOPTIONS="$try"
2299 fi
2300 done
2301 if test "x$CPP_OPTIONS" = x ; then
2302 echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2303 exit 1
2304 fi
2305
2306 # Here, we build the list of files to be "run through" the adjoint
2307 # compiler.
2308 if test -f ./adSrcFiles.tmp ; then
2309 rm -f ./adSrcFiles.tmp
2310 fi
2311 echo " Creating the list of files for the adjoint compiler."
2312 touch adSrcFiles.tmp
2313 for i in $SOURCEDIRS ; do
2314 list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2315 for j in $list_files ; do
2316 cat $i/$j >> adSrcFiles.tmp
2317 done
2318 done
2319 if test ! "x"$FS = "x.f" ; then
2320 cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f
2321 mv -f adSrcFiles.tmp_f adSrcFiles.tmp
2322 fi
2323
2324 echo
2325 echo "=== Creating the Makefile ==="
2326 echo " setting INCLUDES"
2327 for i in $INCLUDEDIRS ; do
2328 if test ! -d $i ; then
2329 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2330 fi
2331 done
2332
2333 if test ! "x$DIVA" = x ; then
2334 echo " Creating the pseudo-MPI include directory"
2335 INCLUDES="-I./mpi_headers $INCLUDES"
2336 rm -rf ./mpi_headers
2337 mkdir -p ./mpi_headers
2338
2339 if test "x$MPIINCLUDEDIR" = x ; then
2340 if test "x$MPIHOME" = x ; then
2341 MPIHOME='/usr'
2342 fi
2343 MPIINCLUDEDIR='$MPIHOME/include'
2344 fi
2345
2346 if test -r $MPIINCLUDEDIR/mpif.h ; then
2347 for i in $MPI_HEADER_FILES; do
2348 cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2349 done
2350
2351 perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2352 else
2353 echo " We cannot create a copy of mpif.h!"
2354 # exit -1
2355 fi
2356 fi
2357
2358 echo " Determining the list of source and include files"
2359 rm -rf .links.tmp
2360 mkdir .links.tmp
2361 touch .links.tmp/foo
2362 if test ! -r ".links.tmp/foo" ; then
2363 echo
2364 echo "ERROR : something is wrong with your directory permissions or"
2365 echo " your user file-creation mask (\"umask\") since creating a"
2366 echo " sub-dir, touch-ing a file within it, and then reading it is"
2367 echo " not working. Please try setting your umask to something"
2368 echo " sane such as:"
2369 echo
2370 echo " umask 0002"
2371 echo
2372 echo " and please verify that you have the proper permissions for"
2373 echo " creating sub-directories and then reading files created"
2374 echo " within them."
2375 echo
2376 exit 1
2377 fi
2378 rm -f .links.tmp/foo
2379
2380 if test "x$OPENAD" != x ; then
2381 OAD_DONT_COMPILE="/dev/null"
2382 OAD_DONT_TRANSFORM="/dev/null"
2383 OAD_KEEP_ORIGINAL="/dev/null"
2384 OAD_CB2M_FILES="/dev/null"
2385 echo " looking for dontCompile file: "
2386 for i in "." $MODS ; do
2387 if test -r $i"/dontCompile" ; then
2388 OAD_DONT_COMPILE=$i"/dontCompile"
2389 echo " found $OAD_DONT_COMPILE"
2390 break
2391 fi
2392 done
2393 echo " looking for dontTransform file: "
2394 for i in "." $MODS ; do
2395 if test -r $i"/dontTransform" ; then
2396 OAD_DONT_TRANSFORM=$i"/dontTransform"
2397 echo " found $OAD_DONT_TRANSFORM"
2398 break
2399 fi
2400 done
2401 echo " looking for keepOriginal file: "
2402 for i in "." $MODS ; do
2403 if test -r $i"/keepOriginal" ; then
2404 OAD_KEEP_ORIGINAL=$i"/keepOriginal"
2405 echo " found $OAD_KEEP_ORIGINAL"
2406 break
2407 fi
2408 done
2409 echo " looking for cb2mFiles: "
2410 for i in "." $MODS ; do
2411 if test -r $i"/cb2mFiles" ; then
2412 OAD_CB2M_FILES=$i"/cb2mFiles"
2413 echo " found $OAD_CB2M_FILES"
2414 break
2415 fi
2416 done
2417 echo " OpenAD exceptions: "
2418 fi
2419
2420 echo "# This section creates symbolic links" > srclinks.tmp
2421 echo "" >> srclinks.tmp
2422 printf 'F77_SRC_FILES = ' > F77srclist.tmp
2423 printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp
2424 printf 'C_SRC_FILES = ' > csrclist.tmp
2425 printf 'F90_SRC_FILES = ' > F90srclist.tmp
2426 printf 'H_SRC_FILES = ' > hsrclist.tmp
2427 printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp
2428 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2429 for d in $alldirs ; do
2430 deplist=
2431 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2432 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2433 if test "x$OPENAD" != x ; then
2434 sfiles=`( echo $sfiles | grep -v _cb2m\. )`
2435 fi
2436 for sf in $sfiles ; do
2437 if test ! -r ".links.tmp/$sf" ; then
2438 if test -f "$d/$sf" ; then
2439 ignore_f=f
2440 case $d/$sf in
2441 ./$PACKAGES_DOT_H)
2442 ignore_f=t
2443 ;;
2444 ./AD_CONFIG.h)
2445 ignore_f=t
2446 ;;
2447 ./FC_NAMEMANGLE.h)
2448 ignore_f=t
2449 ;;
2450 ./BUILD_INFO.h)
2451 ignore_f=t
2452 ;;
2453 ./EMBEDDED_FILES.h)
2454 ignore_f=t
2455 ;;
2456 *)
2457 # For the local directory *ONLY*,
2458 # ignore all soft-links
2459 if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2460 ignore_f=t
2461 else
2462 touch .links.tmp/$sf
2463 deplist="$deplist $sf"
2464 fi
2465 ;;
2466 esac
2467 if test "x$ignore_f" = xf ; then
2468 extn=`echo $sf | $AWK -F. '{print $NF}'`
2469 case $extn in
2470 F)
2471 echo " \\" >> F77srclist.tmp
2472 printf " $sf" >> F77srclist.tmp
2473 if test "x$OPENAD" != x ; then
2474 basename=${sf%%.F}
2475 isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp`
2476 if test -z "$isAD" ; then
2477 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}`
2478 if test -z "$toBeIgnored" ; then
2479 echo " \\" >> nonADF77srclist.tmp
2480 printf " $sf" >> nonADF77srclist.tmp
2481 else
2482 echo " not to be compiled : $sf"
2483 fi
2484 else # file is initially listed as an AD file we want to exclude it
2485 # or we want to retain the untransformed version
2486 notToBeTransformed=`egrep ^$basename'[ ]*' ${OAD_DONT_TRANSFORM}`
2487 untransformedVersionToBeKept=`egrep ^$basename'[ ]*' ${OAD_KEEP_ORIGINAL}`
2488 if test -n "$notToBeTransformed"; then
2489 echo " not to be transformed: $sf"
2490 fi
2491 if test -n "$untransformedVersionToBeKept" ; then
2492 echo " original to be kept : $sf"
2493 fi
2494 if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then
2495 echo " \\" >> nonADF77srclist.tmp
2496 printf " $sf" >> nonADF77srclist.tmp
2497 fi
2498 fi
2499 fi
2500 ;;
2501 F90)
2502 echo " \\" >> F90srclist.tmp
2503 printf " $sf" >> F90srclist.tmp
2504 ;;
2505 c)
2506 echo " \\" >> csrclist.tmp
2507 printf " $sf" >> csrclist.tmp
2508 ;;
2509 h)
2510 echo " \\" >> hsrclist.tmp
2511 printf " $sf" >> hsrclist.tmp
2512 ;;
2513 flow)
2514 echo " \\" >> ad_flow_files.tmp
2515 printf " $sf" >> ad_flow_files.tmp
2516 ;;
2517 esac
2518 fi
2519 fi
2520 fi
2521 done
2522 if test "x$deplist" != x ; then
2523 if test "$d" != "." ; then
2524 echo "" >> srclinks.tmp
2525 echo "# These files are linked from $d" >> srclinks.tmp
2526 echo "$deplist :" >> srclinks.tmp
2527 # We need to make sure that the link isn't already there.
2528 # This may happen when make thinks that a header file has to be "remade"
2529 # because a module it depends on has changed. In this case we do nothing.
2530 printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp
2531 fi
2532 fi
2533 done
2534 rm -rf .links.tmp
2535 echo "" >> F77srclist.tmp
2536 echo "" >> nonADF77srclist.tmp
2537 echo "" >> csrclist.tmp
2538 echo "" >> F90srclist.tmp
2539 echo "" >> hsrclist.tmp
2540 echo "" >> ad_flow_files.tmp
2541
2542 CMDLINE=$0
2543 for xx in "$@" ; do nw=`echo $xx | wc -w`
2544 if test $nw = '1' ; then CMDLINE="$CMDLINE $xx"
2545 else CMDLINE="$CMDLINE '$xx'" ; fi
2546 done
2547
2548 if test -f $MAKEFILE ; then
2549 mv -f $MAKEFILE "$MAKEFILE.old"
2550 fi
2551 echo " Writing makefile: $MAKEFILE"
2552 echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2553 echo "# $MACHINE" >> $MAKEFILE
2554 echo "# This makefile was generated automatically on" >> $MAKEFILE
2555 echo "# $THISDATE" >> $MAKEFILE
2556 echo "# by the command:" >> $MAKEFILE
2557 echo "# $CMDLINE" >> $MAKEFILE
2558 echo "# executed by:" >> $MAKEFILE
2559 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2560
2561 EXE_AD=$EXECUTABLE"_ad"
2562 EXE_FTL=$EXECUTABLE"_ftl"
2563 EXE_SVD=$EXECUTABLE"_svd"
2564
2565 cat >>$MAKEFILE <<EOF
2566 #
2567 # OPTFILE="$OPTFILE"
2568 #
2569 # BUILDDIR : Directory where object files are written
2570 # SOURCEDIRS : Directories containing the source (.F) files
2571 # INCLUDEDIRS : Directories containing the header-source (.h) files
2572 # EXEDIR : Directory where executable that is generated is written
2573 # EXECUTABLE : Full path of executable binary
2574 #
2575 # CPP : C-preprocessor command
2576 # INCLUDES : Directories searched for header files
2577 # DEFINES : Macro definitions for CPP
2578 # MAKEDEPEND : Dependency generator
2579 # KPP : Special preprocessor command (specific to platform)
2580 # KFLAGS : Flags for KPP
2581 # FC : Fortran compiler command
2582 # FFLAGS : Configuration/debugging options for FC
2583 # FOPTIM : Optimization options for FC
2584 # LINK : Command for link editor program
2585 # LIBS : Library flags /or/ additional optimization/debugging flags
2586
2587 ROOTDIR = ${ROOTDIR}
2588 BUILDDIR = ${BUILDDIR}
2589 SOURCEDIRS = ${SOURCEDIRS}
2590 INCLUDEDIRS = ${INCLUDEDIRS}
2591 EXEDIR = ${EXEDIR}
2592 EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2593 TOOLSDIR = ${TOOLSDIR}
2594
2595 #eh3 new defines for the adjoint work
2596 AUTODIFF = ${ROOTDIR}/pkg/autodiff
2597 EXE_AD = ${EXE_AD}
2598 EXE_FTL = ${EXE_FTL}
2599 EXE_SVD = ${EXE_SVD}
2600
2601 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2602 DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2603
2604 # These files are created by Makefile
2605 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2606 EOF
2607
2608 if test "x$EMBED_SRC" = xt ; then
2609 echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2610 else
2611 echo "EMBEDDED_FILES = " >>$MAKEFILE
2612 fi
2613
2614 cat >>$MAKEFILE <<EOF
2615 # Unix ln (link)
2616 LN = ${LN}
2617 # C preprocessor
2618 CPP = cat \$< | ${S64} | ${CPP}
2619 # Dependency generator
2620 MAKEDEPEND = ${MAKEDEPEND}
2621 # Special preprocessor (KAP on DECs, FPP on Crays)
2622 KPP = ${KPP}
2623 # Fortran compiler
2624 FC = ${FC}
2625 # Fortran compiler
2626 F90C = ${F90C}
2627 # C compiler
2628 CC = ${CC}
2629 # Link editor
2630 LINK = ${LINK} ${LDADD}
2631
2632 # Defines for CPP
2633 DEFINES = ${DEFINES}
2634 # Includes for CPP
2635 INCLUDES = ${INCLUDES}
2636 # Flags for KPP
2637 KFLAGS1 = ${KFLAGS1}
2638 KFLAGS2 = ${KFLAGS2}
2639 # Optim./debug for FC
2640 FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2641 FOPTIM = ${FOPTIM}
2642 # Optim./debug for FC
2643 F90FLAGS = ${F90FLAGS}
2644 F90OPTIM = ${F90OPTIM}
2645 F90FIXEDFORMAT = ${F90FIXEDFORMAT}
2646 # Flags for CC
2647 CFLAGS = ${CFLAGS}
2648 # Files that should not be optimized
2649 NOOPTFILES = ${NOOPTFILES}
2650 NOOPTFLAGS = ${NOOPTFLAGS}
2651 # Flags and libraries needed for linking
2652 LIBS = ${LIBS}
2653 # Name of the Mekfile
2654 MAKEFILE=${MAKEFILE}
2655
2656 EOF
2657
2658 cat F77srclist.tmp >> $MAKEFILE
2659 cat nonADF77srclist.tmp >> $MAKEFILE
2660 cat csrclist.tmp >> $MAKEFILE
2661 cat F90srclist.tmp >> $MAKEFILE
2662 cat hsrclist.tmp >> $MAKEFILE
2663 cat ad_flow_files.tmp >> $MAKEFILE
2664
2665 rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp
2666
2667 echo >> $MAKEFILE
2668
2669 # add definitions for preprocessed sources
2670 # and note that not all systems allow case sensitive extensions
2671 # hence the $FS and $FS90 here.
2672 # for fixed format f90 files we use ff90 or FF90 resp
2673 # but these are not expected to be the original source files
2674
2675 echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')' >> $MAKEFILE
2676 echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE
2677 echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE
2678 echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE
2679 echo >> $MAKEFILE
2680 echo '.SUFFIXES:' >> $MAKEFILE
2681 echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE
2682
2683 cat >>$MAKEFILE <<EOF
2684
2685 all: \$(EXECUTABLE)
2686 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2687 @echo Creating \$@ ...
2688 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2689
2690 depend:
2691 @make links
2692 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2693 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2694 -rm -f makedepend.out
2695
2696 lib: libmitgcmuv.a
2697
2698 libmitgcmuv.a: \$(OBJFILES)
2699 ar rcv libmitgcmuv.a \$(OBJFILES)
2700 ar d libmitgcmuv.a main.o
2701
2702 obj: \$(OBJFILES)
2703
2704 links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES)
2705
2706 small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
2707
2708 output.txt: \$(EXECUTABLE)
2709 @printf 'running ... '
2710 @\$(EXECUTABLE) > \$@
2711
2712 # remove most of the files that "make" generates
2713 clean:
2714 -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2715 -rm -rf *.o
2716 -rm -rf *.$FS *.flowdir
2717 -rm -rf *.f$FS90 \$(AD_CLEAN) ad_input*
2718
2719 # remove most of the files that "make" and "make depend" generate
2720 Clean:
2721 @make clean
2722 @make cleanlinks
2723 -rm -f \$(SPECIAL_FILES) f90mkdepend.log $MAKEFILE.old
2724 -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2725 -rm -f genmake_warnings genmake_errors make.log
2726
2727 # remove also the executable, files that "genmake2" generates (except Makefile)
2728 # and output from a run (plus log files from testreport)
2729 CLEAN:
2730 @make Clean
2731 -rm -f \$(EXECUTABLE) \$(EXE_AD) *.bak
2732 -rm -f $LOGFILE genmake_state genmake_*optfile
2733 -rm -f SIZE.h.mpi genmake.tr_log make.tr_log
2734 -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2735 -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2736 -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2737 -rm -f *.txt STD* *diagnostics.log datetime
2738 -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2739 -rm -rf mnc_test_*
2740
2741 makefile:
2742 $THIS_SCRIPT $G2ARGS
2743 cleanlinks:
2744 -find . -type l -exec rm {} \;
2745
2746 # Special targets (SPECIAL_FILES) which are created by make
2747 ${PACKAGES_DOT_H}:
2748 @echo Creating \$@ ...
2749 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2750 AD_CONFIG.h:
2751 @echo Creating \$@ ...
2752 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2753 FC_NAMEMANGLE.h:
2754 @echo Creating \$@ ...
2755 echo "$FC_NAMEMANGLE" > \$@
2756
2757 BUILD_INFO.h:
2758 @echo Creating \$@ ...
2759 EOF
2760
2761 test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2762 test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2763 test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2764 test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2765
2766 if test "x$EMBED_SRC" = xt ; then
2767 cat >>$MAKEFILE <<EOF
2768
2769 decode_files.o : EMBEDDED_FILES.h
2770
2771 ## \$(F77_PP_SRC_FILES)
2772 all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2773 @echo Creating \$@ ...
2774 -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2775 -rm -f all_fF.tar.gz
2776 -gzip all_fF.tar
2777
2778 EMBEDDED_FILES.h : all_fF.tar.gz
2779 @echo Creating \$@ ...
2780 -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2781
2782 EOF
2783 fi
2784
2785 cat >>$MAKEFILE <<EOF
2786
2787 # The normal chain of rules is ( .F - .$FS - .o )
2788
2789 ## This nullifies any default implicit rules concerning these two file types:
2790 ## %.o : %.F
2791
2792 .F.$FS:
2793 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2794 .$FS.o:
2795 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2796 .F.o:
2797 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2798 .F90.$FS90:
2799 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2800 .FF90.f$FS90:
2801 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2802 .$FS90.o:
2803 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2804 .f$FS90.o:
2805 cp \$< \$(basename \$<).f90
2806 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$(basename \$<).f90
2807 .c.o:
2808 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2809 .flow.flowdir:
2810 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2811
2812 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2813 .F.p:
2814 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2815 .p.$FS:
2816 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2817
2818 EOF
2819
2820 #=========================================
2821 #=== Automatic Differentiation Rules ===
2822 #=== for TAMC/TAF ======================
2823
2824 if test "x$OPENAD" = x ; then
2825
2826 cat >>$MAKEFILE <<EOF
2827
2828 TAMC = ${TAMC}
2829 TAF = ${TAF}
2830
2831 TAF_EXTRA = ${TAF_EXTRA}
2832 TAMC_EXTRA = ${TAMC_EXTRA}
2833
2834 EOF
2835
2836 ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2837 ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2838 ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2839 for i in $ad_vars ; do
2840 name=$i
2841 t1="t2=\$"`echo "$i"`
2842 eval $t1
2843 printf "%-20s = " $name >> $MAKEFILE
2844 echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2845 done
2846
2847 echo " Add the source list for AD code generation"
2848 echo >> $MAKEFILE
2849 printf "AD_FILES = " >> $MAKEFILE
2850 AD_FILES=`cat adSrcFiles.tmp`
2851 for i in $AD_FILES ; do
2852 echo " \\" >> $MAKEFILE
2853 printf " $i" >> $MAKEFILE
2854 done
2855 echo >> $MAKEFILE
2856 rm -f adSrcFiles.tmp
2857
2858 cat >>$MAKEFILE <<EOF
2859
2860 # ... AD ...
2861 adall: \$(EXE_AD)
2862 adtaf: ad_taf_output.$FS
2863 adtamc: ad_tamc_output.$FS
2864
2865 ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) \$(AD_FLOW_FILES)
2866 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2867 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2868 -rm -f ad_config.template
2869 @make \$(F77_PP_SRC_FILES)
2870 @make \$(FLOFILES)
2871 cat \$(FLOFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS
2872
2873 ad_taf_output.$FS: ad_input_code.$FS
2874 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2875 ls -l ad_input_code_ad.$FS
2876 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2877
2878 adtafonly:
2879 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2880 ls -l ad_input_code_ad.$FS
2881 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2882
2883 \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2884 \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2885
2886 ad_tamc_output.$FS: ad_input_code.$FS
2887 \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2888 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2889
2890 ad_tamc: ad_tamc_output.o \$(OBJFILES)
2891 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2892
2893 adonlyfwd:
2894 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2895
2896 adtrick:
2897 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2898
2899 # ... FTL ...
2900 ftlall: ftl_taf
2901 ftltaf: ftl_taf_output.$FS
2902 ftltamc: ftl_tamc_output.$FS
2903
2904 ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2905 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2906 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2907 -rm -f ftl_config.template
2908 @make \$(F77_PP_SRC_FILES)
2909 @make \$(AD_FLOW_FILES)
2910 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2911
2912 ftl_taf_output.$FS: ftl_input_code.$FS
2913 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2914 ls -l ftl_input_code_ftl.$FS
2915 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2916
2917 ftltafonly:
2918 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2919 ls -l ftl_input_code_ftl.$FS
2920 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2921
2922 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2923 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2924
2925 ftl_tamc_output.$FS: ftl_input_code.$FS
2926 \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2927 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2928
2929 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2930 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2931
2932 # ... SVD ...
2933 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2934 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2935 @echo "--->>> Do make svdall afterwards to compile. <<<---"
2936 svdall: svd_touch svd_taf
2937
2938 svd_taf: \$(OBJFILES)
2939 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2940
2941 @echo "--->>> Only COMPILE svd code! <<<---"
2942 @echo "--->>> Assumes you previously <<<---"
2943 @echo "--->>> did make svdtaf <<<---"
2944
2945 svd_touch:
2946 @echo "--->>> Only COMPILE svd code! <<<---"
2947 @echo "--->>> Assumes you previously <<<---"
2948 @echo "--->>> did make svdtaf <<<---"
2949 touch ad_taf_output.$FS ftl_taf_output.$FS
2950 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2951 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2952 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2953 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2954 -rm -f ftl_config.template
2955
2956 EOF
2957
2958 fi
2959
2960 #=== for OpenAD ========================
2961
2962 if test "x$OPENAD" != x ; then
2963
2964 # ============ begin OpenAD specific section ==============
2965
2966 cat >>$MAKEFILE <<EOF
2967
2968 # all the source files linked from the various locations:
2969 ALL_LINKED_FILES= \
2970 \$(F77_SRC_FILES) \
2971 \$(C_SRC_FILES) \
2972 \$(H_SRC_FILES) \
2973 \$(F90_SRC_FILES) \
2974 \$(SPECIAL_FILES)
2975
2976 ifndef OPENADROOT
2977 \$(error "Error: environment variable OPENADROOT not defined!")
2978 endif
2979
2980 ifndef XAIFSCHEMAROOT
2981 \$(error "Error: environment variable XAIFSCHEMAROOT not defined!")
2982 endif
2983
2984 ifndef XAIFBOOSTERROOT
2985 \$(error "Error: environment variable XAIFBOOSTERROOT not defined!")
2986 endif
2987
2988 EOF
2989
2990 echo " Add the source list for common block to module conversion "
2991 echo >> $MAKEFILE
2992 printf "CB2M_F90_SRC_NAMES = " >> $MAKEFILE
2993 for i in `cat ${OAD_CB2M_FILES}` ; do
2994 echo " \\" >> $MAKEFILE
2995 printf " $i" >> $MAKEFILE
2996 done
2997 echo >> $MAKEFILE
2998
2999 echo " Add the source list for AD code generation"
3000 echo >> $MAKEFILE
3001 printf "AD_FILES = " >> $MAKEFILE
3002 for i in `cat ${OAD_CB2M_FILES}` ; do
3003 echo " \\" >> $MAKEFILE
3004 printf " ${i}_mod.f$FS90" >> $MAKEFILE
3005 done
3006 AD_FILES=`cat adSrcFiles.tmp`
3007 for i in $AD_FILES ; do
3008 basename=${i%%.f}
3009 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}`
3010 if test -z "$toBeIgnored" ; then
3011 echo " \\" >> $MAKEFILE
3012 printf " $i" >> $MAKEFILE
3013 fi
3014 done
3015 echo >> $MAKEFILE
3016 rm -f adSrcFiles.tmp
3017
3018 cat >>$MAKEFILE <<EOF
3019
3020 adAll: \$(EXE_AD)
3021 .PHONY: adAll
3022
3023 CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
3024
3025 .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)
3026
3027 .PHONY: adDepend
3028 adDepend: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(addsuffix _mod.FF90, \$(CB2M_F90_SRC_NAMES)) \$(F77_SRC_FILES:.F=_cb2m.FF90)
3029 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
3030 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
3031 -rm -f makedepend.out
3032
3033 OPENAD_SUPPORT_F90_SRC_FILES = \
3034 w2f__types.F90 \
3035 OAD_active.F90 \
3036 OAD_cp.F90 \
3037 OAD_rev.F90 \
3038 OAD_tape.F90
3039
3040 OPENAD_SUPPORT_C_SRC_FILES = \
3041 iaddr.c \
3042 timeRatio.c
3043
3044 f95_test_mods.f90: \$(OPENAD_SUPPORT_F90_SRC_FILES:F90=$FS90)
3045 cat \$^ > \$@
3046
3047 f95_test.f90: all_mods.xb.x2w.w2f.pp.f$FS90 \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3048 cat \$^ > \$@
3049
3050 f95_test.out: f95_test_mods.f90 f95_test.f90
3051 f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1
3052 f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1
3053
3054 # the file included below is created by the
3055 # postProcessor and its inclusion sets the
3056 # variable POSTPROCESSEDFILES
3057 # used below. Because the file is made during
3058 # make it won't be read until the second (recursive)
3059 # invocation in the rule below
3060 -include postProcess.make
3061
3062 AD_OBJ_FILES_S1=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) \$(POSTPROCESSEDFILES:.f$FS90=.o)
3063
3064 AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o)
3065
3066 postProcess.comp: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.tag \$(AD_OBJ_FILES_S1)
3067 ifeq (\$(MAKELEVEL),0)
3068 \$(MAKE) adAll
3069 else
3070 touch \$@
3071 endif
3072
3073 \$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.comp \$(AD_OBJ_FILES_S2)
3074 ifeq (\$(MAKELEVEL),1)
3075 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS)
3076 else
3077 touch \$@
3078 endif
3079
3080 # makefile debug rule
3081 openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3082 .PHONY: openad
3083
3084 # create the module files
3085 %_mod.FF90 : %.h ../OAD_support/cb2mGetModules.csh ../OAD_support/cb2mGetModules.awk
3086 ../OAD_support/cb2mGetModules.csh $< ../OAD_support/cb2mGetModules.awk
3087
3088 # create the header files
3089 %_mod.h : %.h ../OAD_support/cb2mGetHeaders.csh ../OAD_support/cb2mGetHeaders.awk
3090 ../OAD_support/cb2mGetHeaders.csh $< ../OAD_support/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES)
3091
3092 # change everybody else to use the new module files:
3093 %_cb2m.FF90 : %.F ../OAD_support/cb2mUseModules.bash
3094 ../OAD_support/cb2mUseModules.bash $< ${MPI}
3095
3096 # makefile debug rule
3097 small_f: \$(CB2M_F90_PP_SRC_FILES)
3098 .PHONY: small_f
3099
3100 ad_output.txt: \$(EXE_AD)
3101 @printf 'linking data files ... '
3102 \$(LN) -f ../input_ad/data* ../input_ad/eedata .
3103 \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .
3104 @printf 'running ... '
3105 @./\$(EXE_AD) > \$@
3106
3107 CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90)
3108 ad_input_code.f$FS90: \$(CB2M_AD_FILES)
3109 cat \$^ > \$@
3110
3111 # strip all comments and blanks to reduce
3112 # the file size in order to reduce perl's memory requirements
3113 ad_input_code_sf.f$FS90 : ad_input_code.f$FS90
3114 cat \$^ | sed -f ../OAD_support/strip.sed | sed -f ../OAD_support/stop2print.sed > \$@
3115
3116 # mfef90 preprocessing
3117 # expand statement functions
3118 # expose mfef90 specific substring handling
3119 # add the w2f__types module
3120 ad_input_code_sf.w2f.f$FS90: ad_input_code_sf.f$FS90 mfef90 whirl2f whirl2f_be w2f__types.f90
3121 ./mfef90 -r8 -z -F -N132 \$<
3122 mv \$<.B \$(basename \$<).B
3123 ./whirl2f -openad \$(basename \$<).B
3124 cat w2f__types.f90 \$(basename \$<).w2f.f > \$@
3125
3126 # canonicalizer
3127 ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py
3128 ./preProcess.py --timing --r8 -H -S \$< -o \$@
3129
3130 # F -> WHIRL
3131 # note that the canonicalized version cuts off at col 72
3132 # doing this also for string constants which is ok as long
3133 # as we are in fixed mode and cut of exactly there.
3134 # Otherwise mfef90 patches in spaces to fill up to 72 (or 132)
3135 # characters respectively.
3136 ad_input_code_sf.w2f.pre.B: ad_input_code_sf.w2f.pre.f$FS90 mfef90
3137 ./mfef90 -r8 -z -F \$<
3138 mv \$<.B \$@
3139
3140 # WHIRL -> XAIF
3141 ad_input_code_sf.w2f.pre.xaif : ad_input_code_sf.w2f.pre.B whirl2xaif
3142 ./whirl2xaif -s -n --debug 1 -o \$@ \$<
3143
3144 # XAIF -> XAIF'
3145 ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver
3146 ./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r
3147
3148 # XAIF' -> WHIRL'
3149 ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl
3150 ./xaif2whirl --debug 1 ad_input_code_sf.w2f.pre.B \$<
3151
3152 # WHIRL' -> F'
3153 ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be
3154 ./whirl2f -FLIST:ftn_file=\$@ -openad \$<
3155
3156 # insert template directives
3157 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash
3158 ../OAD_support/insertTemplateDir.bash \$< \$@
3159
3160 PPEXTRAS=\$(wildcard ../OAD_support/ad_template.*.F) ../OAD_support/ad_inline.F
3161 # postprocess F'
3162 postProcess.tag: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 postProcess.py \$(PPEXTRAS:.F=.f)
3163 # the target is a placeholder to signal execution of the rule
3164 touch \$@
3165 # this step also creates the file postProcess.make but we cannot
3166 # name it as the target or else make will try to remake it for
3167 # the include directive above for any rule, e.g. make clean
3168 ./postProcess.py --progress --timing --outputFormat=fixed -m r -i ../OAD_support/ad_inline.f --width 4 \$<
3169
3170 # setup some links
3171 %.xsd:
3172 \$(LN) \${XAIFSCHEMAROOT}/schema/\$@ .
3173
3174 mfef90:
3175 \$(LN) \${OPEN64ROOT}/crayf90/sgi/mfef90 .
3176
3177 # link the support files:
3178 \$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES):
3179 \$(LN) ../OAD_support/\$@ .
3180
3181 whirl2xaif xaif2whirl:
3182 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3183
3184 preProcess.py postProcess.py:
3185 \$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ .
3186
3187 whirl2f whirl2f_be:
3188 \$(LN) \${OPEN64ROOT}/whirl2f/\$@ .
3189
3190 oadDriver:
3191 \$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@
3192
3193 AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp \$(PPEXTRAS:.F=.f)
3194
3195 # ============ end OpenAD specific section ==============
3196
3197 EOF
3198
3199 fi
3200
3201 #=========================================
3202
3203 if test "x$EXEHOOK" != x ; then
3204 printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
3205 fi
3206
3207 echo " Making list of \"exceptions\" that need \".p\" files"
3208 for i in $KPPFILES ; do
3209 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3210 RETVAL=$?
3211 if test "x$RETVAL" != x0 ; then
3212 echo "Error: unable to add file \"$i\" to the exceptions list"
3213 fi
3214 echo "$base.$FS: $base.p" >> $MAKEFILE
3215 done
3216
3217 echo " Making list of NOOPTFILES"
3218 for i in $NOOPTFILES ; do
3219 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3220 RETVAL=$?
3221 if test "x$RETVAL" != x0 ; then
3222 echo "Error: unable to add file \"$i\" to the exceptions list"
3223 fi
3224 echo "$base.o: $base.$FS" >> $MAKEFILE
3225 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
3226 done
3227
3228 echo " Add rules for links"
3229 cat srclinks.tmp >> $MAKEFILE
3230 rm -f srclinks.tmp
3231
3232 echo " Adding makedepend marker"
3233 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
3234
3235 printf "\n=== Done ===\n"
3236
3237 # Create special header files
3238 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
3239 if test ! -f $PACKAGES_DOT_H ; then
3240 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3241 else
3242 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
3243 RETVAL=$?
3244 if test "x$RETVAL" = x0 ; then
3245 rm -f $PACKAGES_DOT_H".tmp"
3246 else
3247 mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
3248 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3249 fi
3250 fi
3251 if test ! -f AD_CONFIG.h ; then
3252 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
3253 fi
3254
3255 # Write the "state" for future records
3256 if test "x$DUMPSTATE" = xt ; then
3257 printf "" > genmake_state
3258 for i in $gm_state ; do
3259 t1="t2=\$$i"
3260 eval $t1
3261 echo "$i='$t2'" | sed -e 's/ */ /g' >> genmake_state
3262 done
3263 fi

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