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Revision 1.221 - (show annotations) (download)
Fri Jun 24 22:03:39 2011 UTC (8 years, 2 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint63a, checkpoint63
Changes since 1.220: +6 -1 lines
interpret a makedepend argument which contains "tools?xmakedepend"
 as the local xmakedepend (in MITgcm/tools dir); this is similar to
 what is done with the cyrus makedepend.

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.220 2011/06/03 19:53:45 jmc Exp $
4 # $Name: $
5 #
6 # Makefile generator for MITgcm UV codes
7 # created by cnh 03/98
8 # adapted by aja 06/98
9 # modified by aja 01/00
10 # rewritten in bash by eh3 08/03
11
12 # Explain usage
13 usage() {
14 cat <<EOF
15
16 Usage: "$0" [OPTIONS]
17 where [OPTIONS] can be:
18
19 -help | --help | -h | --h
20 Print this help message and exit.
21
22 -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
23 -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
24 Use "NAME" as the adoptfile. By default, the file at
25 "tools/adjoint_options/adjoint_default" will be used.
26
27 -nooptfile | --nooptfile
28 -optfile NAME | --optfile NAME | -of NAME | --of NAME
29 -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
30 Use "NAME" as the optfile. By default, an attempt will be
31 made to find an appropriate "standard" optfile in the
32 tools/build_options/ directory.
33
34 -pdepend NAME | --pdepend NAME
35 -pdepend=NAME | --pdepend=NAME
36 Get package dependency information from "NAME".
37
38 -pgroups NAME | --pgroups NAME
39 -pgroups=NAME | --pgroups=NAME
40 Get the package groups information from "NAME".
41
42 -bash NAME
43 Explicitly specify the Bourne or BASH shell to use
44
45 -make NAME | -m NAME
46 --make=NAME | -m=NAME
47 Use "NAME" for the MAKE program. The default is "make" but
48 many platforms, "gmake" is the preferred choice.
49
50 -makefile NAME | -mf NAME
51 --makefile=NAME | -mf=NAME
52 Call the makefile "NAME". The default is "Makefile".
53
54 -makedepend NAME | -md NAME
55 --makedepend=NAME | -md=NAME
56 Use "NAME" for the MAKEDEPEND program.
57
58 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
59 -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
60 Specify the location of the MITgcm ROOTDIR as "NAME".
61 By default, genamke will try to find the location by
62 looking in parent directories (up to the 5th parent).
63
64 -mods NAME | --mods NAME | -mo NAME | --mo NAME
65 -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
66 Here, "NAME" specifies a list of directories that are
67 used for additional source code. Files found in the
68 "mods list" are given preference over files of the same
69 name found elsewhere.
70
71 -disable NAME | --disable NAME
72 -disable=NAME | --disable=NAME
73 Here "NAME" specifies a list of packages that we don't
74 want to use. If this violates package dependencies,
75 genamke will exit with an error message.
76
77 -enable NAME | --enable NAME
78 -enable=NAME | --enable=NAME
79 Here "NAME" specifies a list of packages that we wish
80 to specifically enable. If this violates package
81 dependencies, genamke will exit with an error message.
82
83 -standarddirs NAME | --standarddirs NAME
84 -standarddirs=NAME | --standarddirs=NAME
85 Here, "NAME" specifies a list of directories to be
86 used as the "standard" code.
87
88 -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
89 -fc=NAME | --fc=NAME
90 Use "NAME" as the fortran compiler. By default, genmake
91 will search for a working compiler by trying a list of
92 "usual suspects" such as g77, f77, etc.
93
94 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
95 Use "NAME" as the C compiler. By default, genmake
96 will search for a working compiler by trying a list of
97 "usual suspects" such as gcc, c89, cc, etc.
98
99 -use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4
100 Use "real*4" type for _RS variable (#undef REAL4_IS_SLOW)
101 *only* works if CPP_EEOPTIONS.h allows this.
102
103 -ignoretime | -ignore_time | --ignoretime | --ignore_time
104 Ignore all the "wall clock" routines entirely. This will
105 not in any way hurt the model results -- it simply means
106 that the code that checks how long the model spends in
107 various routines will give junk values.
108
109 -ts | --ts
110 Produce timing information per timestep
111 -papis | --papis
112 Produce summary MFlop/s (and IPC) with PAPI per timestep
113 -pcls | --pcls
114 Produce summary MFlop/s etc. with PCL per timestep
115 -foolad | --foolad
116 Fool the AD code generator
117 -papi | --papi
118 Performance analysis with PAPI
119 -pcl | --pcl
120 Performance analysis with PCL
121 -hpmt | --hpmt
122 Performance analysis with the HPM Toolkit
123
124 -ieee | --ieee
125 use IEEE numerics. Note that this option *only* works
126 if it is supported by the OPTFILE that is being used.
127 -devel | --devel
128 Add additional warning and debugging flags for development
129 (if supported by the OPTFILE); also switch to IEEE numerics.
130 -gsl | --gsl
131 Use GSL to control floating point rounding and precision
132
133 -mpi | --mpi
134 Include MPI header files and link to MPI libraries
135 -mpi=PATH | --mpi=PATH
136 Include MPI header files and link to MPI libraries using MPI_ROOT
137 set to PATH. i.e. Include files from \$PATH/include, link to libraries
138 from \$PATH/lib and use binaries from \$PATH/bin.
139
140 -omp | --omp
141 Activate OpenMP code + use Compiler option OMPFLAG
142 -omp=OMPFLAG | --omp=OMPFLAG
143 Activate OpenMP code + use Compiler option OMPFLAG
144
145 -es | --es | -embed-source | --embed-source
146 Embed a tarball containing the full source code
147 (including the Makefile, etc.) used to build the
148 executable [off by default]
149
150 -ds | --ds
151 Report genmake internal variables status (DUMPSTATE)
152 to file "genmake_state" (for debug purpose)
153
154 While it is most often a single word, the "NAME" variables specified
155 above can in many cases be a space-delimited string such as:
156
157 --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
158 -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
159 -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
160
161 which, depending upon your shell, may need to be single-quoted.
162
163 For more detailed genmake documentation, please see:
164
165 http://mitgcm.org/public/devel_HOWTO/
166
167 EOF
168
169 exit 1
170 }
171
172 # Search for particular CPP #cmds associated with packages
173 # usage: test_for_package_in_cpp_options CPP_file package_name
174 test_for_package_in_cpp_options() {
175 cpp_options=$1
176 pkg=$2
177 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
178 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
179 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
180 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
181 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
182 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
183 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
184 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
185 }
186
187 # Search for particular CPP #cmds associated with MPI
188 # usage: test_for_mpi_in_cpp_eeoptions CPP_file
189 test_for_mpi_in_cpp_eeoptions() {
190 cpp_options=$1
191 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
192 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
193 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
194 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
195 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
196 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
197 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
198 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
199 }
200
201 # Search for particular string in a file. Return 1 if detected, 0 if not
202 # usage: test_for_string_in_file file string
203 test_for_string_in_file() {
204 file=$1
205 strng=$2
206 grep -i "$strng" $file > /dev/null 2>&1
207 RETVAL=$?
208 if test "x${RETVAL}" = x0 ; then
209 printf "Error: In $file there is an illegal line: "
210 grep -i "$strng" $file
211 exit 99
212 fi
213 return 0
214 }
215
216 # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
217 # the package list.
218 expand_pkg_groups() {
219 new_packages=
220 if test -r $PKG_GROUPS ; then
221 cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
222 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
223 matched=0
224 for i in $PACKAGES ; do
225 line=`grep "^ *$i" ./p2.tmp`
226 RETVAL=$?
227 if test "x$RETVAL" = x0 ; then
228 matched=1
229 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
230 echo " replacing \"$i\" with:$replace"
231 new_packages="$new_packages $replace"
232 else
233 new_packages="$new_packages $i"
234 fi
235 done
236 PACKAGES=$new_packages
237 rm -f ./p[1,2].tmp
238 return $matched
239 else
240 echo "Warning: can't read package groups definition file: $PKG_GROUPS"
241 fi
242 }
243
244 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
245 # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
246 check_for_broken_Ff() {
247 # Do we have defaults for $FS and/or $FS90 ?
248 tfs=f
249 tfs9=f90
250 if test "x$FS" != x ; then
251 tfs="$FS"
252 fi
253 if test "x$FS90" != x ; then
254 tfs9="$FS90"
255 fi
256
257 # First check the ability to create a *.F/.f pair.
258 cat <<EOF >> genmake_hello.F
259 program hello
260 write(*,*) 'hi'
261 stop
262 end
263 EOF
264 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
265 RETVAL=$?
266 if test "x$RETVAL" != x0 ; then
267 if test "x$FS" = x ; then
268 FS='for'
269 FS90='fr9'
270 check_for_broken_Ff
271 else
272 cat <<EOF 2>&1
273 ERROR: Your file system cannot distinguish between *.F and *.f files
274 (fails the "cp" test) and this program cannot find a suitable
275 replacement extension. Please try a different build environment or
276 contact the <MITgcm-support@mitgcm.org> list for help.
277
278 EOF
279 exit -1
280 fi
281 return
282 fi
283 rm -f genmake_hello.*
284
285 # Check the ability of ${MAKE} and ${LN} to use the current set
286 # of extensions.
287 cat <<EOF >> genmake_hello.F
288 program hello
289 write(*,*) 'hi'
290 stop
291 end
292 EOF
293 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
294 cat <<EOF >> $MAKEFILE
295 .SUFFIXES:
296 .SUFFIXES: .$tfs .F
297 .F.$tfs:
298 $LN \$< \$@
299 EOF
300 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
301 RETVAL=$?
302 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
303 if test "x$FS" = x ; then
304 FS='for'
305 FS90='fr9'
306 check_for_broken_Ff
307 else
308 cat <<EOF 2>&1
309 ERROR: Your file system cannot distinguish between *.F and *.f files
310 (fails the "make/ln" test) and this program cannot find a suitable
311 replacement extension. Please try a different build environment or
312 contact the <MITgcm-support@mitgcm.org> list for help.
313
314 EOF
315 exit -1
316 return
317 fi
318 fi
319 rm -f genmake_hello.* $MAKEFILE
320 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
321
322 # If we make it here, use the extensions
323 FS=$tfs
324 FS90=$tfs9
325 return
326 }
327
328 look_for_makedepend() {
329
330 # The "original" makedepend is part of the Imake system that is
331 # most often distributed with XFree86 or with an XFree86 source
332 # package. As a result, many machines (eg. generic Linux) do not
333 # have a system-default "makedepend" available. For those
334 # systems, we have two fall-back options:
335 #
336 # 1) a makedepend implementation shipped with the cyrus-imapd
337 # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
338 #
339 # 2) a known-buggy xmakedpend shell script
340 #
341 # So the choices are, in order:
342 #
343 # 1) use the user-specified program
344 # 2) use a system-wide default
345 # 3) locally build and use the cyrus implementation
346 # 4) fall back to the buggy local xmakedpend script
347 #
348 echo >> $LOGFILE
349 echo "running: look_for_makedepend()" >> $LOGFILE
350 if test "x${MAKEDEPEND}" != x ; then
351 echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
352 RETVAL=$?
353 if test x"$RETVAL" = x0 ; then
354 build_cyrus_makedepend
355 RETVAL=$?
356 if test "x$RETVAL" != x0 ; then
357 echo "WARNING: unable to build cyrus-makedepend. Try 'makedepend'"
358 MAKEDEPEND=
359 fi
360 else
361 echo "${MAKEDEPEND}" | grep 'tools.xmakedepend' > /dev/null 2>&1
362 RETVAL=$?
363 if test "x$RETVAL" = x0 ; then
364 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
365 fi
366 echo " --> MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
367 fi
368 fi
369 if test "x${MAKEDEPEND}" = x ; then
370 which makedepend > /dev/null 2>&1
371 RV0=$?
372 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
373 # echo 'MAKEFILE="'$MAKEFILE'"'
374 cat <<EOF >> $MAKEFILE
375 # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
376 #
377 # Some "makedepend" implementations will die if they cannot
378 # find a Makefile -- so this file is here to gives them an
379 # empty one to find and parse.
380 EOF
381 cat <<EOF >> genmake_tc.f
382 program test
383 write(*,*) 'test'
384 stop
385 end
386 EOF
387 makedepend genmake_tc.f > /dev/null 2>&1
388 RV1=$?
389 test -f $MAKEFILE && rm -f $MAKEFILE
390 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
391 if test "x${RV0}${RV1}" = x00 ; then
392 MAKEDEPEND=makedepend
393 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
394 else
395 echo " system-default makedepend not found. Try to build cyrus-makedepend"
396 # Try to build the cyrus implementation
397 build_cyrus_makedepend
398 RETVAL=$?
399 if test "x$RETVAL" != x0 ; then
400 echo "WARNING: unable to build cyrus-makedepend. Use local xmakedepend"
401 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
402 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
403 fi
404 fi
405 fi
406 }
407
408 build_cyrus_makedepend() {
409 echo >> $LOGFILE
410 echo "running: build_cyrus_makedepend()" >> $LOGFILE
411 rm -f ./genmake_cy_md
412 (
413 cd $ROOTDIR/tools/cyrus-imapd-makedepend \
414 && ./configure > /dev/null 2>&1 \
415 && make > /dev/null 2>&1
416 if test -x ./makedepend.exe ; then
417 $LN ./makedepend.exe ./makedepend
418 fi
419 ./makedepend ifparser.c > /dev/null 2>&1 \
420 && echo "true"
421 ) > ./genmake_cy_md
422 grep true ./genmake_cy_md > /dev/null 2>&1
423 RETVAL=$?
424 rm -f ./genmake_cy_md
425 if test "x$RETVAL" = x0 ; then
426 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
427 echo " --> set MAKEDEPEND=${MAKEDEPEND}" >> $LOGFILE
428 return 0
429 else
430 echo "WARNING: fail to build cyrus-imapd-makedepend" >> $LOGFILE
431 return 1
432 fi
433 }
434
435 build_embed_encode()
436 {
437 printf " building the embed-encode utility... "
438 if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
439 if test ! -d "$ROOTDIR/tools/embed_encode" ; then
440 echo
441 echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
442 echo
443 EMBED_SRC=f
444 return 1
445 fi
446 clist="cc gcc c89 $CC"
447 for ic in $clist ; do
448 comm="$ic -o encode_files encode_files.c"
449 ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
450 RETVAL=$?
451 if test "x$RETVAL" = x0 ; then
452 echo "OK"
453 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
454 return 0
455 fi
456 done
457 echo
458 echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
459 echo " so it has been disabled"
460 echo
461 EMBED_SRC=f
462 return 1
463 fi
464 echo "OK"
465 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
466 }
467
468 # look for possible C compilers
469 look_for_C_compilers() {
470 echo >> $LOGFILE
471 echo "running: look_for_C_compilers()" >> $LOGFILE
472 rm -f ./genmake_hello.c ./genmake_hello
473 cat >> genmake_hello.c << EOF
474 #include <stdio.h>
475 int main(int argc, char **argv) {
476 printf("Hello!\n");
477 return 0;
478 }
479 EOF
480 tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
481 p_CC=
482 for c in $tmp ; do
483 COMM="$c $CFLAGS -o genmake_hello genmake_hello.c"
484 echo $COMM >> $LOGFILE
485 $COMM >> $LOGFILE 2>&1
486 RETVAL=$?
487 if test "x${RETVAL}" = x0 ; then
488 echo " $c test successful" >> $LOGFILE
489 p_CC="$p_CC $c"
490 fi
491 done
492 rm -f ./genmake_hello.c ./genmake_hello
493 if test "x${p_CC}" = x ; then
494 cat 1>&2 <<EOF
495
496 Error: No C compilers were found in your path. Please specify one using:
497
498 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
499 2) the CC or MITGCM_CC environment variables.
500
501 EOF
502 exit 1
503 else
504 echo " The possible C compilers found in your path are: $p_CC" | tee -a $LOGFILE
505 if test "x$CC" = x ; then
506 CC=`echo $p_CC | $AWK '{print $1}'`
507 echo " Setting C compiler to: "$CC
508 fi
509 fi
510 echo " --> set CC='$CC'" >> $LOGFILE
511 }
512
513 # Guess possible config options for this host
514 find_possible_optfile() {
515
516 echo >> $LOGFILE
517 echo "running: find_possible_optfile()" >> $LOGFILE
518 tmp1=`uname`"_"`uname -m`
519 tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
520 tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
521 tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
522 tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
523 tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
524 PLATFORM=$tmp3
525 echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
526 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
527 echo " The platform appears to be: $PLATFORM" | tee -a $LOGFILE
528
529 #================================================================
530 # look for possible FORTRAN compilers
531 echo " look for possible FORTRAN compilers" >> $LOGFILE
532 tmp="$MITGCM_FC $FC efc gfortran g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 g95"
533 p_FC=
534 rm -f ./genmake_hello.f
535 cat >> genmake_hello.f <<EOF
536 program hello
537 do i=1,3
538 print *, 'hello world : ', i
539 enddo
540 end
541 EOF
542 for f in $tmp ; do
543 COMM="$f -o genmake_hello genmake_hello.f"
544 echo $COMM >> $LOGFILE
545 $COMM >> $LOGFILE 2>&1
546 RETVAL=$?
547 if test "x${RETVAL}" = x0 ; then
548 echo " $f test successful" >> $LOGFILE
549 p_FC="$p_FC $f"
550 fi
551 done
552 rm -f ./genmake_hello.f ./genmake_hello
553 if test "x${p_FC}" = x ; then
554 cat 1>&2 <<EOF
555
556 Error: No Fortran compilers were found in your path. Please specify one using:
557
558 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
559 2) a command-line option (eg. "-fc NAME"), or
560 3) the FC or MITGCM_FC environment variables.
561
562 EOF
563 exit 1
564 else
565 echo " The possible FORTRAN compilers found in your path are: $p_FC" | tee -a $LOGFILE
566 fi
567
568 # Use the first of the compilers found in the current PATH
569 # that has a correctly-named optfile
570 if test "x$OPTFILE" = x -a "x$FC" = x ; then
571 for i in $p_FC ; do
572 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
573 if test -r $OPTFILE ; then
574 echo " Setting OPTFILE to: "$OPTFILE | tee -a $LOGFILE
575 break
576 fi
577 done
578 fi
579
580 if test "x$OPTFILE" = x ; then
581 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
582 if test ! -r $OPTFILE ; then
583 echo " I looked for the file "$OPTFILE" but did not find it"
584 fi
585 fi
586
587 if test "x$OPTFILE" = x ; then
588 cat 1>&2 <<EOF
589
590 Error: No options file was found in: $ROOTDIR/tools/build_options/
591 that matches this platform ("$PLATFORM") and the compilers found in
592 your path. Please specify an "optfile" using:
593
594 1) the command line (eg. "-optfile=path/to/OPTFILE"), or
595 2) the MITGCM_OF environment variable.
596
597 If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
598
599 EOF
600 exit 1
601 fi
602
603 # # look for possible MPI libraries
604 # mpi_libs=
605 # mpi_fort=`which mpif77 2>/dev/null`
606 # RETVAL=$?
607 # if test "x${RETVAL}" = x0 ; then
608 # cat >>test.f <<EOF
609 # PROGRAM HELLO
610 # DO 10, I=1,10
611 # PRINT *,'Hello World'
612 # 10 CONTINUE
613 # STOP
614 # END
615 # EOF
616 # eval "$mpi_fort -showme test.f > out"
617 # RETVAL=$?
618 # if test "x${RETVAL}" = x0 ; then
619 # a=`cat out`
620 # for i in $a ; do
621 # case $i in
622 # -*)
623 # mpi_libs="$mpi_libs $i" ;;
624 # esac
625 # done
626 # echo "The MPI libs appear to be:"
627 # echo " "$mpi_libs
628 # fi
629 # rm -f test.f out
630 # fi
631 }
632
633 # Parse the package dependency information
634 get_pdepend_list() {
635
636 # strip the comments and then convert the dependency file into
637 # two arrays: PNAME, DNAME
638 cat $1 | sed -e 's/#.*$//g' \
639 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
640 > ./.pd_tmp
641 RETVAL=$?
642 if test ! "x${RETVAL}" = x0 ; then
643 echo "Error: unable to parse package dependencies -- please check PKG_DEPEND=\"$1\""
644 exit 1
645 fi
646 . ./.pd_tmp
647 rm -f ./.pd_tmp
648 }
649
650 # Build a CPP macro to automate calling C routines from FORTRAN
651 get_fortran_c_namemangling() {
652
653 #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
654 if test ! "x$FC_NAMEMANGLE" = x ; then
655 return 0
656 fi
657 echo " running: get_fortran_c_namemangling()" >> $LOGFILE
658
659 default_nm="#define FC_NAMEMANGLE(X) X ## _"
660
661 cat > genmake_test.c <<EOF
662 void tcall( char * string ) { tsub( string ); }
663 EOF
664 COMM="$CC $CFLAGS -c genmake_test.c"
665 echo ' '$COMM >> $LOGFILE
666 $COMM >> $LOGFILE 2>&1
667 RETVAL=$?
668 if test "x$RETVAL" != x0 ; then
669 FC_NAMEMANGLE=$default_nm
670 cat <<EOF>> $LOGFILE
671
672 WARNING: C test compile fails
673 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
674 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
675 EOF
676 return 1
677 fi
678 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
679 RETVAL=$?
680 if test "x$RETVAL" != x0 ; then
681 FC_NAMEMANGLE=$default_nm
682 cat <<EOF>> $LOGFILE
683
684 WARNING: The "nm" command failed.
685 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
686 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
687 EOF
688 return 1
689 fi
690 cat > genmake_tcomp.$FS <<EOF
691 subroutine tcall( string )
692 character*(*) string
693 call tsub( string )
694 end
695 EOF
696 COMM="$FC $FFLAGS -c genmake_tcomp.$FS"
697 echo ' '$COMM >> $LOGFILE
698 $COMM >> $LOGFILE 2>&1
699 RETVAL=$?
700 if test "x$RETVAL" != x0 ; then
701 FC_NAMEMANGLE=$default_nm
702 cat <<EOF>> $LOGFILE
703
704 WARNING: FORTRAN test compile fails -- please see '$LOGFILE'
705 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
706 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
707 EOF
708 return 1
709 fi
710 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
711 RETVAL=$?
712 if test "x$RETVAL" != x0 ; then
713 FC_NAMEMANGLE=$default_nm
714 cat <<EOF>> $LOGFILE
715
716 WARNING: The "nm" command failed.
717 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
718 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
719 EOF
720 return 1
721 fi
722
723 c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
724 f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
725 c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
726 f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
727
728 nmangle="X"
729 if test "x$c_a" != "x$f_a" ; then
730 comm="echo x$f_a | sed -e 's|x$c_a||'"
731 a=`eval $comm`
732 nmangle="$a ## $nmangle"
733 fi
734 if test "x$c_b" != "x$f_b" ; then
735 comm="echo x$f_b | sed -e 's|x$c_b||'"
736 b=`eval $comm`
737 nmangle="$nmangle ## $b"
738 fi
739
740 FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
741
742 # cleanup the testing files
743 rm -f genmake_tcomp.* genmake_test.*
744
745 echo " --> set FC_NAMEMANGLE='$FC_NAMEMANGLE'" >> $LOGFILE
746 }
747
748 check_HAVE_CLOC() {
749 echo >> $LOGFILE
750 echo "running: check_HAVE_CLOC()" >> $LOGFILE
751 get_fortran_c_namemangling
752 cat <<EOF > genmake_tc_1.c
753 $FC_NAMEMANGLE
754 #include <stdio.h>
755 #include <stdlib.h>
756 #include <unistd.h>
757 #include <assert.h>
758 #include <sys/time.h>
759 void FC_NAMEMANGLE(cloc) ( double *curtim )
760 {
761 struct timeval tv1;
762 gettimeofday(&tv1 , (void *)NULL );
763 *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
764 *curtim = *curtim/1.E6;
765 }
766 EOF
767 COMM="$CC $CFLAGS -c genmake_tc_1.c"
768 echo $COMM >> $LOGFILE
769 $COMM >> $LOGFILE 2>&1
770 RET_C=$?
771 cat <<EOF > genmake_tc_2.$FS
772 program hello
773 REAL*8 wtime
774 external cloc
775 call cloc(wtime)
776 print *," HELLO WORLD", wtime
777 end
778 EOF
779 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
780 echo $COMM >> $LOGFILE
781 $COMM >> $LOGFILE 2>&1
782 RET_F=$?
783 test -x ./genmake_tc && ./genmake_tc >> $LOGFILE 2>&1
784 RETVAL=$?
785 if test "x$RETVAL" = x0 ; then
786 HAVE_CLOC=t
787 DEFINES="$DEFINES -DHAVE_CLOC"
788 fi
789 rm -f genmake_tc*
790 echo " --> set HAVE_CLOC='$HAVE_CLOC'" >> $LOGFILE
791 }
792
793 check_HAVE_SIGREG() {
794 if test ! "x$HAVE_SIGREG" = x ; then
795 return
796 fi
797 echo >> $LOGFILE
798 echo "running: check_HAVE_SIGREG()" >> $LOGFILE
799 get_fortran_c_namemangling
800 cat <<EOF > genmake_tc_1.c
801 $FC_NAMEMANGLE
802 #include <stdlib.h>
803 #include <stdio.h>
804 #include <signal.h>
805 #include <errno.h>
806 #include <ucontext.h>
807
808 int * ip;
809
810 static void killhandler(
811 unsigned int sn, siginfo_t si, struct ucontext *sc )
812 {
813 *ip = *ip + 1;
814 return;
815 }
816
817 void FC_NAMEMANGLE(sigreg) (int * aip)
818 {
819 struct sigaction s;
820 ip = aip;
821 s.sa_flags = SA_SIGINFO;
822 s.sa_sigaction = (void *)killhandler;
823 if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
824 printf("Sigaction returned error = %d\n", errno);
825 exit(0);
826 }
827 return;
828 }
829 EOF
830 COMM="$CC $CFLAGS -c genmake_tc_1.c"
831 echo $COMM >> $LOGFILE
832 $COMM >> $LOGFILE 2>&1
833 RET_C=$?
834 cat <<EOF > genmake_tc_2.$FS
835 program hello
836 integer anint
837 common /iv/ anint
838 external sigreg
839 call sigreg(anint)
840 end
841 EOF
842 cat genmake_tc_2.$FS >> $LOGFILE
843 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
844 echo $COMM >> $LOGFILE
845 $COMM >> $LOGFILE 2>&1
846 RETVAL=$?
847 if test "x$RETVAL" = x0 ; then
848 HAVE_SIGREG=t
849 DEFINES="$DEFINES -DHAVE_SIGREG"
850 fi
851 rm -f genmake_tc*
852 echo " --> set HAVE_SIGREG='$HAVE_SIGREG'" >> $LOGFILE
853 }
854
855 check_HAVE_SETRLSTK() {
856 if test "x$HAVE_SETRLSTK" = xt ; then
857 DEFINES="$DEFINES -DHAVE_SETRLSTK"
858 return
859 fi
860 if test ! "x$HAVE_SETRLSTK" = x ; then
861 return
862 fi
863 echo >> $LOGFILE
864 echo "running: check_HAVE_SETRLSTK()" >> $LOGFILE
865 get_fortran_c_namemangling
866 cat <<EOF > genmake_tc_1.c
867 $FC_NAMEMANGLE
868 #include <sys/time.h>
869 #include <sys/resource.h>
870 #include <unistd.h>
871 void FC_NAMEMANGLE(setrlstk) ()
872 {
873 struct rlimit rls;
874 rls.rlim_cur = RLIM_INFINITY;
875 rls.rlim_max = RLIM_INFINITY;
876 setrlimit(RLIMIT_STACK, &rls);
877 return;
878 }
879 EOF
880 COMM="$CC $CFLAGS -c genmake_tc_1.c"
881 echo $COMM >> $LOGFILE
882 $COMM >> $LOGFILE 2>&1
883 RET_C=$?
884 cat <<EOF > genmake_tc_2.$FS
885 program hello
886 external setrlstk
887 call setrlstk()
888 end
889 EOF
890 cat genmake_tc_2.$FS >> $LOGFILE
891 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
892 echo $COMM >> $LOGFILE
893 $COMM >> $LOGFILE 2>&1
894 RETVAL=$?
895 if test "x$RETVAL" = x0 ; then
896 HAVE_SETRLSTK=t
897 DEFINES="$DEFINES -DHAVE_SETRLSTK"
898 fi
899 rm -f genmake_tc*
900 echo " --> set HAVE_SETRLSTK='$HAVE_SETRLSTK'" >> $LOGFILE
901 }
902
903 check_HAVE_STAT() {
904 echo >> $LOGFILE
905 echo "running: check_HAVE_STAT()" >> $LOGFILE
906 get_fortran_c_namemangling
907 cat <<EOF > genmake_tc_1.c
908 $FC_NAMEMANGLE
909 #include <stdio.h>
910 #include <stdlib.h>
911 #include <unistd.h>
912 #include <sys/stat.h>
913 #include <sys/types.h>
914 void FC_NAMEMANGLE(tfsize) ( int *nbyte )
915 {
916 char name[512];
917 struct stat astat;
918
919 name[0] = 'a'; name[1] = '\0';
920 if (! stat(name, &astat))
921 *nbyte = (int)(astat.st_size);
922 else
923 *nbyte = -1;
924 }
925 EOF
926 COMM="$CC $CFLAGS -c genmake_tc_1.c"
927 echo $COMM >> $LOGFILE
928 $COMM >> genmake_tc.log 2>&1
929 RET_C=$?
930 cat <<EOF > genmake_tc_2.$FS
931 program hello
932 integer nbyte
933 call tfsize(nbyte)
934 print *," HELLO WORLD", nbyte
935 end
936 EOF
937 cat genmake_tc_2.$FS >> $LOGFILE
938 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
939 echo $COMM >> $LOGFILE
940 $COMM >> genmake_tc.log 2>&1
941 RETVAL=$?
942 if test "x$RETVAL" = x0 ; then
943 HAVE_STAT=t
944 DEFINES="$DEFINES -DHAVE_STAT"
945 fi
946 rm -f genmake_tc*
947 echo " --> set HAVE_STAT='$HAVE_STAT'" >> $LOGFILE
948 }
949
950 check_netcdf_libs() {
951 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
952 return
953 fi
954 echo >> $LOGFILE
955 echo "running: check_netcdf_libs()" >> $LOGFILE
956 cat <<EOF > genmake_tnc.F
957 program fgennc
958 #include "netcdf.inc"
959 EOF
960 if test ! "x$MPI" = x ; then
961 echo '#include "mpif.h"' >> genmake_tnc.F
962 fi
963 cat <<EOF >> genmake_tnc.F
964 integer iret, ncid, xid
965 iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
966 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
967 iret = nf_def_dim(ncid, 'X', 11, xid)
968 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
969 iret = nf_close(ncid)
970 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
971 end
972 EOF
973 echo "=== genmake_tnc.F >>>" > genmake_tnc.log
974 cat genmake_tnc.F >> genmake_tnc.log
975 echo "<<< genmake_tnc.F ===" >> genmake_tnc.log
976 RET_CPP=f
977 COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
978 echo "$COMM" >> genmake_tnc.log
979 eval $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
980 if test "x$RET_CPP" = xf ; then
981 echo " WARNING: CPP failed to pre-process the netcdf test." \
982 >> genmake_tnc.log
983 echo " Please check that \$INCLUDES is properly set." \
984 >> genmake_tnc.log
985 fi
986 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
987 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
988 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
989 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
990 RET_COMPILE=$?
991 cat genmake_tnc.log >> $LOGFILE
992
993 #EH3 Remove test program execution for machines that either disallow
994 #EH3 execution or cannot support it (eg. cross-compilers)
995 #EH3
996 #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
997 #EH3 RETVAL=$?
998 #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
999
1000 if test "x$RET_COMPILE" = x0 ; then
1001 HAVE_NETCDF=t
1002 echo "check_netcdf: successful" >> $LOGFILE
1003 else
1004 # try again with "-lnetcdf" added to the libs
1005 echo "==> try again with added '-lnetcdf'" > genmake_tnc.log
1006 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1007 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1008 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1009 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1010 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1011 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
1012 RET_COMPILE=$?
1013 echo >> $LOGFILE
1014 cat genmake_tnc.log >> $LOGFILE
1015 if test "x$RET_COMPILE" = x0 ; then
1016 LIBS="$LIBS -lnetcdf"
1017 HAVE_NETCDF=t
1018 echo "check_netcdf: successful" >> $LOGFILE
1019 else
1020 # try again with "-lnetcdff" added to the libs
1021 echo "==> try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
1022 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1023 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1024 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1025 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1026 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1027 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
1028 RET_COMPILE=$?
1029 echo >> $LOGFILE
1030 cat genmake_tnc.log >> $LOGFILE
1031 if test "x$RET_COMPILE" = x0 ; then
1032 LIBS="$LIBS -lnetcdff -lnetcdf"
1033 HAVE_NETCDF=t
1034 echo "check_netcdf: successful" >> $LOGFILE
1035 fi
1036 fi
1037 fi
1038 rm -f genmake_tnc*
1039 echo " --> set HAVE_NETCDF='$HAVE_NETCDF'" >> $LOGFILE
1040 }
1041
1042
1043 ###############################################################################
1044 # Sequential part of script starts here
1045 ###############################################################################
1046
1047 # Set defaults here
1048 COMMANDL="$0 $@"
1049
1050 PLATFORM=
1051 LN=
1052 S64=
1053 KPP=
1054 #FC=
1055 #CC=gcc
1056 #CPP=
1057 LINK=
1058 DEFINES=
1059 PACKAGES=
1060 ENABLE=
1061 DISABLE=
1062 # MAKEFILE=
1063 # MAKEDEPEND=
1064 PKG_DEPEND=
1065 PKG_GROUPS=
1066 DUMPSTATE=f
1067 OPTFILE=
1068 INCLUDES="-I. $INCLUDES"
1069 FFLAGS=
1070 FOPTIM=
1071 FEXTRAFLAGS=
1072 USE_EXTENDED_SRC=
1073 EXTENDED_SRC_FLAG=
1074 GET_FC_VERSION=
1075 CFLAGS=
1076 KFLAGS1=
1077 KFLAGS2=
1078 #LDADD=
1079 LIBS=
1080 KPPFILES=
1081 NOOPTFILES=
1082 NOOPTFLAGS=
1083 MPI=
1084 MPIPATH=
1085 OMP=
1086 OMPFLAG=
1087 USE_R4=
1088 TS=
1089 PAPIS=
1090 PCLS=
1091 FOOLAD=
1092 PAPI=
1093 PCL=
1094 HPMT=
1095 GSL=
1096 DEVEL=
1097 HAVE_TEST_L=
1098
1099 # DEFINES checked by test compilation or command-line
1100 HAVE_SYSTEM=
1101 HAVE_FDATE=
1102 FC_NAMEMANGLE=
1103 HAVE_CLOC=
1104 # HAVE_SETRLSTK=
1105 HAVE_STAT=
1106 HAVE_NETCDF=
1107 HAVE_ETIME=
1108 IGNORE_TIME=
1109
1110 MODS=
1111 TOOLSDIR=
1112 SOURCEDIRS=
1113 INCLUDEDIRS=
1114 STANDARDDIRS="USE_THE_DEFAULT"
1115
1116 G2ARGS=
1117 BASH=
1118 PWD=`pwd`
1119 test "x$MAKE" = x && MAKE=make
1120 test "x$AWK" = x && AWK=awk
1121 EMBED_SRC=
1122 THISHOST=`hostname`
1123 THISCWD=`pwd`
1124 THISDATE=`date`
1125 THISUSER=`echo $USER`
1126 THISVER=
1127 MACHINE=`uname -a`
1128 EXECUTABLE=
1129 EXEHOOK=
1130 EXEDIR=
1131 PACKAGES_CONF=
1132 IEEE=
1133 if test "x$MITGCM_IEEE" != x ; then
1134 IEEE=$MITGCM_IEEE
1135 fi
1136 FS=
1137 FS90=
1138
1139 AUTODIFF_PKG_USED=f
1140 AD_OPTFILE=
1141 TAF=
1142 AD_TAF_FLAGS=
1143 FTL_TAF_FLAGS=
1144 SVD_TAF_FLAGS=
1145 TAF_EXTRA=
1146 TAMC=
1147 AD_TAMC_FLAGS=
1148 FTL_TAF_FLAGS=
1149 SVD_TAMC_FLAGS=
1150 TAMC_EXTRA=
1151
1152 # The following state can be set directly by command-line switches
1153 gm_s1="OPTFILE PKG_DEPEND PKG_GROUPS MAKEFILE MAKEDEPEND PLATFORM ROOTDIR MODS DISABLE ENABLE"
1154 gm_s2="FC CC USE_R4 TS PAPIS PCLS PAPI PCL HPMT IEEE DEVEL GSL MPI OMP DUMPSTATE STANDARDDIRS"
1155
1156 # The following state is not directly set by command-line switches
1157 gm_s3="LN S64 LINK MAKE PACKAGES INCLUDES FFLAGS FOPTIM FEXTRAFLAGS"
1158 gm_s4="CFLAGS LIBS KPP KFLAGS1 KFLAGS2 KPPFILES NOOPTFILES NOOPTFLAGS"
1159 gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD THISHOST THISUSER THISDATE THISVER MACHINE"
1160 gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1161 gm_s7="FC_NAMEMANGLE HAVE_NETCDF HAVE_SYSTEM HAVE_FDATE HAVE_ETIME"
1162
1163 # The following are all related to adjoint/tangent-linear stuff
1164 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1165 gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1166 gm_s12="TAF_EXTRA TAMC_EXTRA"
1167
1168 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
1169 gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1170
1171 cat <<EOF
1172
1173 GENMAKE :
1174
1175 A program for GENerating MAKEfiles for the MITgcm project.
1176 For a quick list of options, use "genmake2 -h"
1177 or for more detail see the Developer's HOWTO manual at:
1178 http://mitgcm.org/public/docs.html
1179
1180 EOF
1181
1182 LOGFILE="genmake.log"
1183 #- clean-up previous genmake logfiles:
1184 rm -f genmake_state genmake_*optfile $LOGFILE
1185
1186 echo "=== Processing options files and arguments ==="
1187 gm_local="genmake_local"
1188 printf " getting local config information: "
1189 if test -f $gm_local ; then
1190 echo "using $gm_local"
1191 . $gm_local
1192 # echo "DISABLE=$DISABLE"
1193 # echo "ENABLE=$ENABLE"
1194 else
1195 echo "none found"
1196 fi
1197
1198 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1199 #parse_options
1200 ac_prev=
1201 for ac_option in "$@" ; do
1202
1203 G2ARGS="$G2ARGS \"$ac_option\""
1204
1205 # If the previous option needs an argument, assign it.
1206 if test -n "$ac_prev"; then
1207 eval "$ac_prev=\$ac_option"
1208 ac_prev=
1209 continue
1210 fi
1211
1212 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1213
1214 case $ac_option in
1215
1216 -help | --help | -h | --h)
1217 usage ;;
1218
1219 -nooptfile | --nooptfile)
1220 OPTFILE="NONE" ;;
1221 -optfile | --optfile | -of | --of)
1222 ac_prev=OPTFILE ;;
1223 -optfile=* | --optfile=* | -of=* | --of=*)
1224 OPTFILE=$ac_optarg ;;
1225
1226 -adoptfile | --adoptfile | -adof | --adof)
1227 ac_prev=AD_OPTFILE ;;
1228 -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1229 AD_OPTFILE=$ac_optarg ;;
1230
1231 -pdepend | --pdepend)
1232 ac_prev=PKG_DEPEND ;;
1233 -pdepend=* | --pdepend=*)
1234 PKG_DEPEND=$ac_optarg ;;
1235
1236 -pgroups | --pgroups)
1237 ac_prev=PKG_GROUPS ;;
1238 -pgroups=* | --pgroups=*)
1239 PKG_GROUPS=$ac_optarg ;;
1240
1241 -make | --make | -m | --m)
1242 ac_prev=MAKE ;;
1243 -make=* | --make=* | -m=* | --m=*)
1244 MAKE=$ac_optarg ;;
1245
1246 -bash | --bash)
1247 ac_prev=BASH ;;
1248 -bash=* | --bash=*)
1249 BASH=$ac_optarg ;;
1250
1251 -makedepend | --makedepend | -md | --md)
1252 ac_prev=MAKEDEPEND ;;
1253 -makedepend=* | --makedepend=* | -md=* | --md=*)
1254 MAKEDEPEND=$ac_optarg ;;
1255
1256 -makefile | --makefile | -ma | --ma)
1257 ac_prev=MAKEFILE ;;
1258 -makefile=* | --makefile=* | -ma=* | --ma=*)
1259 MAKEFILE=$ac_optarg ;;
1260
1261 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1262 echo "ERROR: The platform option has been removed. Please specify"
1263 echo " the build options using the \"optfile\" mechanism."
1264 echo
1265 usage
1266 ;;
1267
1268 -rootdir | --rootdir | -rd | --rd)
1269 ac_prev=ROOTDIR ;;
1270 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1271 ROOTDIR=$ac_optarg ;;
1272
1273 -mods | --mods | -mo | --mo)
1274 ac_prev=MODS ;;
1275 -mods=* | --mods=* | -mo=* | --mo=*)
1276 MODS=$ac_optarg ;;
1277
1278 -disable | --disable)
1279 ac_prev=DISABLE ;;
1280 -disable=* | --disable=*)
1281 DISABLE=$ac_optarg ;;
1282
1283 -enable | --enable)
1284 ac_prev=ENABLE ;;
1285 -enable=* | --enable=*)
1286 ENABLE=$ac_optarg ;;
1287
1288 -standarddirs | --standarddirs)
1289 ac_prev=STANDARDDIRS ;;
1290 -standarddirs=* | --standarddirs=*)
1291 STANDARDDIRS=$ac_optarg ;;
1292
1293 # -cpp | --cpp)
1294 # ac_prev=cpp ;;
1295 # -cpp=* | --cpp=*)
1296 # CPP=$ac_optarg ;;
1297
1298 -cc | --cc)
1299 ac_prev=CC ;;
1300 -cc=* | --cc=*)
1301 CC=$ac_optarg ;;
1302
1303 -fortran | --fortran | -fc | --fc)
1304 ac_prev=FC ;;
1305 -fc=* | --fc=*)
1306 FC=$ac_optarg ;;
1307
1308 -fs | --fs)
1309 ac_prev=FS ;;
1310 -fs=* | --fs=*)
1311 FS=$ac_optarg ;;
1312
1313 -fs90 | --fs90)
1314 ac_prev=FS90 ;;
1315 -fs90=* | --fs90=*)
1316 FS90=$ac_optarg ;;
1317
1318 -use_real4 | -use_r4 | -ur4 | --use_real4 | --use_r4 | --ur4 )
1319 USE_R4=true ;;
1320
1321 -ieee | --ieee)
1322 IEEE=true ;;
1323 -noieee | --noieee)
1324 echo "Warning: ignore option '$ac_option' (default is already without '-ieee')" ;;
1325 -devel | --devel)
1326 IEEE=true ; DEVEL=true ;;
1327 -gsl | --gsl)
1328 GSL=true ;;
1329
1330 -ts | --ts)
1331 TS=true ;;
1332 -papis | --papis)
1333 PAPIS=true ;;
1334 -pcls | --pcls)
1335 PCLS=true ;;
1336 -foolad | --foolad)
1337 FOOLAD=true ;;
1338 -papi | --papi)
1339 PAPI=true ;;
1340 -pcl | --pcl)
1341 PCL=true ;;
1342 -hpmt | --hpmt)
1343 HPMT=true ;;
1344
1345 -mpi | --mpi)
1346 MPI=true ;;
1347 -mpi=* | --mpi=*)
1348 MPIPATH=$ac_optarg
1349 MPI=true ;;
1350
1351 -omp | --omp)
1352 OMP=true ;;
1353 -omp=* | --omp=*)
1354 OMPFLAG=$ac_optarg
1355 OMP=true ;;
1356
1357 -ds | --ds)
1358 DUMPSTATE=t ;;
1359
1360 -taf_extra | --taf_extra)
1361 ac_prev=TAF_EXTRA ;;
1362 -taf_extra=* | --taf_extra=*)
1363 TAF_EXTRA=$ac_optarg ;;
1364
1365 -tamc_extra | --tamc_extra)
1366 ac_prev=TAMC_EXTRA ;;
1367 -tamc_extra=* | --tamc_extra=*)
1368 TAMC_EXTRA=$ac_optarg ;;
1369
1370 -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1371 IGNORE_TIME="-DIGNORE_TIME" ;;
1372
1373 -es | --es | -embed-source | --embed-source)
1374 EMBED_SRC=t ;;
1375
1376 -*)
1377 echo "Error: unrecognized option: "$ac_option
1378 usage
1379 ;;
1380
1381 *)
1382 echo "Error: unrecognized argument: "$ac_option
1383 usage
1384 ;;
1385
1386 esac
1387
1388 done
1389
1390 if test -f ./.genmakerc ; then
1391 echo
1392 echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1393 echo " file. This file format is no longer supported. For directions on"
1394 echo " how to setup and use the new \"genmake2\" script, please see:"
1395 echo " http://mitgcm.org/public/devel_HOWTO/"
1396 echo " and send an email to MITgcm-support@mitgcm.org if you need help."
1397 echo "WARNING: ignore \"./.genmakerc\" and continue."
1398 echo
1399 fi
1400
1401 # Find the MITgcm ${ROOTDIR}
1402 if test "x${ROOTDIR}" = x ; then
1403 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1404 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1405 ROOTDIR=".."
1406 else
1407 for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1408 if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1409 ROOTDIR=$d
1410 printf "Warning: ROOTDIR was not specified ;"
1411 echo " try using a local copy of MITgcm found at \"$ROOTDIR\""
1412 break
1413 fi
1414 done
1415 fi
1416 fi
1417 if test "x${ROOTDIR}" = x ; then
1418 echo "Error: Cannot determine ROOTDIR for MITgcm code."
1419 echo " Please specify a ROOTDIR using either an options "
1420 echo " file or a command-line option."
1421 exit 1
1422 fi
1423 if test ! -d ${ROOTDIR} ; then
1424 echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1425 exit 1
1426 fi
1427
1428 # Find the MITgcm ${THISVER}
1429 version_file="${ROOTDIR}/doc/tag-index"
1430 if test -f $version_file ; then
1431 THISVER=`$AWK '/^checkpoint/{print $1; exit}' $version_file`
1432 #- remove ./BUILD_INFO.h file if older than version_file
1433 if test -f ./BUILD_INFO.h -a ./BUILD_INFO.h -ot $version_file ; then
1434 echo " remove ./BUILD_INFO.h (older than ${version_file})"
1435 rm -f ./BUILD_INFO.h
1436 fi
1437 fi
1438
1439 if test "x$MAKEFILE" = x ; then
1440 MAKEFILE="Makefile"
1441 fi
1442
1443 echo " getting OPTFILE information: "
1444 if test "x${OPTFILE}" = x ; then
1445 if test "x$MITGCM_OF" = x ; then
1446 echo "Warning: no OPTFILE specified so we'll look for possible settings"
1447 printf "\n=== Searching for possible settings for OPTFILE ===\n"
1448 find_possible_optfile
1449 else
1450 OPTFILE=$MITGCM_OF
1451 fi
1452 fi
1453 if test "x$OPTFILE" != xNONE ; then
1454 if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1455 echo " using OPTFILE=\"$OPTFILE\""
1456 . "$OPTFILE"
1457 RETVAL=$?
1458 if test "x$RETVAL" != x0 ; then
1459 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1460 echo "--please check that variable syntax is bash-compatible"
1461 exit 1
1462 fi
1463 if test "x$DUMPSTATE" = xt ; then
1464 cp -f $OPTFILE "genmake_optfile"
1465 fi
1466 else
1467 echo "Error: can't read OPTFILE=\"$OPTFILE\""
1468 exit 1
1469 fi
1470 fi
1471
1472 echo " getting AD_OPTFILE information: "
1473 if test "x${AD_OPTFILE}" = x ; then
1474 if test "x$MITGCM_AD_OF" = x ; then
1475 AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1476 else
1477 AD_OPTFILE=$MITGCM_AD_OF
1478 fi
1479 fi
1480 if test "x${AD_OPTFILE}" != xNONE ; then
1481 if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1482 echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1483 . "$AD_OPTFILE"
1484 RETVAL=$?
1485 if test "x$RETVAL" != x0 ; then
1486 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1487 echo "--please check that variable syntax is bash-compatible"
1488 exit 1
1489 fi
1490 if test "x$DUMPSTATE" = xt ; then
1491 cp -f $AD_OPTFILE "genmake_ad_optfile"
1492 fi
1493 else
1494 echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1495 exit 1
1496 fi
1497 fi
1498
1499 #====================================================================
1500 # Set default values if not set by the optfile
1501 #
1502 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1503 # either set defaults or complain and abort!
1504 if test ! "x$BASH" = x ; then
1505 # add a trailing space so that it works within the Makefile syntax (see below)
1506 BASH="$BASH "
1507 fi
1508 if test "x$FC" = x ; then
1509 cat <<EOF 1>&2
1510
1511 Error: no Fortran compiler: please specify using one of the following:
1512 1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1513 2) the "-fc=XXX" command-line option
1514 3) the "./genmake_local" file
1515 EOF
1516 exit 1
1517 fi
1518 if test "x$GET_FC_VERSION" != x ; then
1519 echo "Get compiler version using: $FC $GET_FC_VERSION" >> $LOGFILE
1520 $FC $GET_FC_VERSION >> $LOGFILE 2>&1
1521 echo "<-- compiler version ----" >> $LOGFILE
1522 fi
1523
1524 if test "x$CC" = x ; then
1525 look_for_C_compilers
1526 fi
1527
1528 if test "x$LINK" = x ; then
1529 LINK=$FC
1530 fi
1531 if test "x$MAKE" = x ; then
1532 MAKE="make"
1533 fi
1534 if test "x$CPP" = x ; then
1535 CPP="cpp -traditional -P"
1536 fi
1537 #EH3 === UGLY ===
1538 # The following is an ugly little hack to check for $CPP in /lib/ and
1539 # it should eventually be replaced with a more general function that
1540 # searches a combo of the user's path and a list of "usual suspects"
1541 # to find the correct location for binaries such as $CPP.
1542 for i in " " "/lib/" ; do
1543 echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1544 done
1545 #EH3 === UGLY ===
1546 echo "#define A a" | $CPP > test_cpp 2>&1
1547 RETVAL=$?
1548 if test "x$RETVAL" != x0 ; then
1549 cat <<EOF 1>&2
1550
1551 Error: C pre-processor "$CPP" failed the test case: please specify using:
1552
1553 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1554 2) the "./genmake_local" file
1555 3) with the CPP environment variable
1556
1557 EOF
1558 exit 1
1559 else
1560 rm -f test_cpp
1561 fi
1562
1563 look_for_makedepend
1564
1565 # Check that soft-link command is set and usable
1566 if test "x$LN" = x ; then
1567 LN="ln -s"
1568 fi
1569 echo "test" > genmake_test_ln
1570 $LN genmake_test_ln genmake_tlink
1571 RETVAL=$?
1572 if test "x$RETVAL" != x0 ; then
1573 cat <<EOF 1>&2
1574
1575 Error: The command "$LN" failed -- please specify a working soft-link
1576 command in the optfile.
1577
1578 EOF
1579 exit 1
1580 fi
1581 test -L genmake_tlink > /dev/null 2>&1
1582 RETVAL=$?
1583 if test "x$RETVAL" = x0 ; then
1584 HAVE_TEST_L=t
1585 fi
1586 rm -f genmake_test_ln genmake_tlink
1587
1588 # Check for broken *.F/*.f handling and fix if possible
1589 check_for_broken_Ff
1590
1591 if test ! "x$MPI" = x ; then
1592 echo " Turning on MPI cpp macros"
1593 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1594 fi
1595 if test ! "x$OMP" = x ; then
1596 echo " Add OMPFLAG and turn on OpenMP cpp macros"
1597 FFLAGS="$FFLAGS $OMPFLAG"
1598 F90FLAGS="$F90FLAGS $OMPFLAG"
1599 DEFINES="$DEFINES -DUSE_OMP_THREADING"
1600 fi
1601
1602 if test ! "x$USE_R4" = x ; then
1603 echo " Turning on LET_RS_BE_REAL4 cpp flag"
1604 DEFINES="$DEFINES -DLET_RS_BE_REAL4"
1605 fi
1606
1607 if test ! "x$TS" = x ; then
1608 echo " Turning on timing per timestep"
1609 if test ! "x$FOOLAD" = x ; then
1610 DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1611 else
1612 DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1613 fi
1614 PACKAGES="$PACKAGES showflops"
1615 fi
1616 if test ! "x$PAPIS" = x ; then
1617 echo " Turning on PAPI flop summary per timestep"
1618 echo " Please make sure PAPIINC, PAPILIB are defined"
1619 if test ! "x$FOOLAD" = x ; then
1620 DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1621 else
1622 DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1623 fi
1624 INCLUDES="$INCLUDES $PAPIINC"
1625 LIBS="$LIBS $PAPILIB"
1626 PACKAGES="$PACKAGES showflops"
1627 fi
1628 if test ! "x$PCLS" = x ; then
1629 echo " Turning on PCL counter summary per timestep"
1630 echo " Please make sure PCLINC, PCLLIB are defined"
1631 if test ! "x$FOOLAD" = x ; then
1632 DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1633 else
1634 DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1635 fi
1636 INCLUDES="$INCLUDES $PCLINC"
1637 LIBS="$LIBS $PCLLIB"
1638 PACKAGES="$PACKAGES showflops"
1639 fi
1640 if test ! "x$PAPI" = x ; then
1641 if test ! "x$PAPIS" = x ; then
1642 echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1643 echo " Sticking with PAPI flop summary per timestep!"
1644 else
1645 echo " Turning on performance analysis with PAPI"
1646 echo " Please make sure PAPIINC, PAPILIB are defined"
1647 DEFINES="$DEFINES -DUSE_PAPI"
1648 INCLUDES="$INCLUDES $PAPIINC"
1649 LIBS="$LIBS $PAPILIB"
1650 fi
1651 fi
1652 if test ! "x$PCL" = x ; then
1653 if test ! "x$PCLS" = x ; then
1654 echo " PCL performance analysis and flop summary per timestep cannot co-exist!"
1655 echo " Sticking with PCL flop summary per timestep!"
1656 else
1657 echo " Turning on performance analysis with PCL"
1658 echo " Please make sure PCLINC, PCLLIB are defined"
1659 DEFINES="$DEFINES -DUSE_PCL"
1660 INCLUDES="$INCLUDES $PCLINC"
1661 LIBS="$LIBS $PCLLIB"
1662 fi
1663 fi
1664 if test ! "x$HPMT" = x ; then
1665 if test ! "x$PAPI" = x ; then
1666 echo " PAPI and the HPM Toolkit cannot co-exist!"
1667 echo " Sticking with PAPI!"
1668 else if test ! "x$PCL" = x ; then
1669 echo " PCL and the HPM Toolkit cannot co-exist!"
1670 echo " Sticking with PCL!"
1671 else
1672 echo " Turning on performance analysis with the HPM Toolkit"
1673 echo " Please make sure HPMTINC, HPMTLIB are defined"
1674 DEFINES="$DEFINES -DUSE_LIBHPM"
1675 INCLUDES="$INCLUDES $HPMTINC"
1676 LIBS="$LIBS $HPMTLIB"
1677 fi
1678 fi
1679 fi
1680 if test ! "x$GSL" = x ; then
1681 echo " Turning on use of GSL to control floating point calculations"
1682 echo " Please make sure GSLINC, GSLLIB are defined"
1683 DEFINES="$DEFINES -DUSE_GSL_IEEE"
1684 INCLUDES="$INCLUDES $GSLINC"
1685 LIBS="$LIBS $GSLLIB"
1686 fi
1687 #- if USE_EXTENDED_SRC is set, add EXTENDED_SRC_FLAG to FFLAGS :
1688 if test ! "x$USE_EXTENDED_SRC" = x ; then
1689 FFLAGS="$FFLAGS $EXTENDED_SRC_FLAG"
1690 F90FIXEDFORMAT="$F90FIXEDFORMAT $EXTENDED_SRC_FLAG"
1691 fi
1692
1693 printf "\n=== Checking system libraries ===\n"
1694 printf " Do we have the system() command using $FC... "
1695 cat > genmake_tcomp.$FS <<EOF
1696 program hello
1697 call system('echo hi')
1698 end
1699 EOF
1700 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1701 RETVAL=$?
1702 if test "x$RETVAL" = x0 ; then
1703 HAVE_SYSTEM=t
1704 DEFINES="$DEFINES -DHAVE_SYSTEM"
1705 echo "yes"
1706 else
1707 HAVE_SYSTEM=
1708 echo "no"
1709 fi
1710 rm -f genmake_tcomp*
1711
1712 printf " Do we have the fdate() command using $FC... "
1713 cat > genmake_tcomp.$FS <<EOF
1714 program hello
1715 CHARACTER*(128) string
1716 string = ' '
1717 call fdate( string )
1718 print *, string
1719 end
1720 EOF
1721 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1722 RETVAL=$?
1723 if test "x$RETVAL" = x0 ; then
1724 HAVE_FDATE=t
1725 DEFINES="$DEFINES -DHAVE_FDATE"
1726 echo "yes"
1727 else
1728 HAVE_FDATE=
1729 echo "no"
1730 fi
1731 rm -f genmake_tcomp*
1732
1733 printf " Do we have the etime() command using $FC... "
1734 cat > genmake_tcomp.$FS <<EOF
1735 program hello
1736 REAL*4 ACTUAL, TARRAY(2)
1737 EXTERNAL ETIME
1738 REAL*4 ETIME
1739 actual = etime( tarray )
1740 print *, tarray
1741 end
1742 EOF
1743 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1744 RETVAL=$?
1745 if test "x$RETVAL" = x0 ; then
1746 HAVE_ETIME=t
1747 DEFINES="$DEFINES -DHAVE_ETIME"
1748 echo "yes"
1749 else
1750 HAVE_ETIME=
1751 echo "no"
1752 fi
1753 rm -f genmake_tcomp*
1754
1755 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1756 check_HAVE_CLOC
1757 if test "x$HAVE_CLOC" != x ; then
1758 echo "yes"
1759 else
1760 echo "no"
1761 if test "x$EMBED_SRC" = xt ; then
1762 echo " WARNING: you requested file embedding but it has"
1763 echo " been disabled since C code cannot be called"
1764 EMBED_SRC=
1765 fi
1766 fi
1767 rm -f genmake_t*
1768
1769 printf " Can we unlimit the stack size using $FC... "
1770 check_HAVE_SETRLSTK
1771 if test "x$HAVE_SETRLSTK" = xt ; then
1772 echo "yes"
1773 else
1774 echo "no"
1775 fi
1776 rm -f genmake_t*
1777
1778 printf " Can we register a signal handler using $FC... "
1779 check_HAVE_SIGREG
1780 if test "x$HAVE_SIGREG" = xt ; then
1781 echo "yes"
1782 else
1783 echo "no"
1784 fi
1785 rm -f genmake_t*
1786
1787 printf " Can we use stat() through C calls... "
1788 check_HAVE_STAT
1789 if test "x$HAVE_STAT" != x ; then
1790 echo "yes"
1791 else
1792 echo "no"
1793 fi
1794 rm -f genmake_t*
1795
1796 printf " Can we create NetCDF-enabled binaries... "
1797 check_netcdf_libs
1798 if test "x$HAVE_NETCDF" != x ; then
1799 echo "yes"
1800 else
1801 echo "no"
1802 fi
1803 DEFINES="$DEFINES $IGNORE_TIME"
1804
1805 if test "x$EMBED_SRC" = xt ; then
1806 build_embed_encode
1807 fi
1808 if test "x$EMBED_SRC" = xt ; then
1809 ENABLE="$ENABLE embed_files"
1810 fi
1811
1812 printf "\n=== Setting defaults ===\n"
1813 printf " Adding MODS directories: "
1814 for d in $MODS ; do
1815 if test ! -d $d ; then
1816 echo
1817 echo "Error: MODS directory \"$d\" not found!"
1818 exit 1
1819 else
1820 printf "$d "
1821 SOURCEDIRS="$SOURCEDIRS $d"
1822 INCLUDEDIRS="$INCLUDEDIRS $d"
1823 fi
1824 done
1825 echo
1826
1827 #if test "x${PLATFORM}" = x ; then
1828 # PLATFORM=$p_PLATFORM
1829 #fi
1830
1831 if test "x${EXEDIR}" = x ; then
1832 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1833 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1834 EXEDIR=../exe
1835 else
1836 EXEDIR=.
1837 fi
1838 fi
1839 if test ! -d ${EXEDIR} ; then
1840 echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1841 exit 1
1842 fi
1843
1844 if test "x${TOOLSDIR}" = x ; then
1845 TOOLSDIR="$ROOTDIR/tools"
1846 fi
1847 if test ! -d ${TOOLSDIR} ; then
1848 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1849 exit 1
1850 fi
1851 if test "x$S64" = x ; then
1852 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1853 RETVAL=$?
1854 if test "x${RETVAL}" = x0 ; then
1855 S64='$(TOOLSDIR)/set64bitConst.sh'
1856 else
1857 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1858 RETVAL=$?
1859 if test "x${RETVAL}" = x0 ; then
1860 S64='$(TOOLSDIR)/set64bitConst.csh'
1861 else
1862 cat <<EOF
1863
1864 ERROR: neither of the two default scripts:
1865
1866 ${TOOLSDIR}/set64bitConst.sh
1867 ${TOOLSDIR}/set64bitConst.csh
1868
1869 are working so please check paths or specify (with \$S64) a
1870 working version of this script.
1871
1872 EOF
1873 exit 1
1874 fi
1875 fi
1876 fi
1877 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1878
1879 EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1880
1881 # Set Standard Code Directories:
1882 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
1883 STANDARDDIRS="eesupp model"
1884 fi
1885 # if model in Standard-Code-Dir, add eesupp (needed to compile model)
1886 echo " $STANDARDDIRS " | grep ' model ' > /dev/null 2>&1
1887 ckM=$?
1888 echo " $STANDARDDIRS " | grep ' eesupp ' > /dev/null 2>&1
1889 ckE=$?
1890 if test $ckM = 0 -a $ckE = 1 ; then
1891 STANDARDDIRS="$STANDARDDIRS eesupp"
1892 fi
1893
1894 # We have a special set of source files in eesupp/src which are
1895 # generated from some template source files. We'll make them first so
1896 # they appear as regular source code
1897 if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1898 echo " Making source files in eesupp from templates"
1899 ( cd $ROOTDIR"/eesupp/src/" && $MAKE clean_old && $MAKE \
1900 ) > make_eesupp.errors 2>&1
1901 RETVAL=$?
1902 if test "x${RETVAL}" = x0 ; then
1903 rm -f make_eesupp.errors
1904 else
1905 echo "Error: problem encountered while building source files in eesupp:"
1906 cat make_eesupp.errors 1>&2
1907 exit 1
1908 fi
1909 fi
1910
1911 #same for pkg/exch2 and pkg/regrid
1912 for pdir in exch2 regrid ; do
1913 if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1914 echo " Making source files in pkg/${pdir} from templates"
1915 ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE clean_old && $MAKE \
1916 ) > make_${pdir}.errors 2>&1
1917 RETVAL=$?
1918 if test "x${RETVAL}" = x0 ; then
1919 rm -f make_${pdir}.errors
1920 else
1921 echo "Error: problem encountered while building source files in pkg/${pdir}:"
1922 cat make_${pdir}.errors 1>&2
1923 exit 1
1924 fi
1925 fi
1926 done
1927
1928 printf "\n=== Determining package settings ===\n"
1929 if test "x${PKG_DEPEND}" = x ; then
1930 tmp=$ROOTDIR"/pkg/pkg_depend"
1931 if test -r $tmp ; then PKG_DEPEND=$tmp ; fi
1932 fi
1933 if test "x${PKG_DEPEND}" = x ; then
1934 echo "Warning: No package dependency information was specified."
1935 echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1936 else
1937 if test ! -r ${PKG_DEPEND} ; then
1938 echo "Error: can't read package dependency info from PKG_DEPEND=\"$PKG_DEPEND\""
1939 exit 1
1940 fi
1941 echo " getting package dependency info from $PKG_DEPEND"
1942 # Strip the comments and then convert the dependency file into arrays: PNAME, DNAME
1943 get_pdepend_list $PKG_DEPEND
1944 fi
1945
1946 # A default package groups file "$ROOTDIR/pkg/pkg_groups" is provided
1947 # to define the "default_pkg_list" and package groups (for convenience, one
1948 # can specify a group of packages using names like "ocean" and "atmosphere").
1949 if test "x${PKG_GROUPS}" = x ; then
1950 tmp=$ROOTDIR"/pkg/pkg_groups"
1951 if test -r $tmp ; then PKG_GROUPS=$tmp ; fi
1952 fi
1953 if test "x${PKG_GROUPS}" = x ; then
1954 echo "Warning: No package groups information was specified."
1955 echo " Please check that ROOTDIR/pkg/pkg_groups exists."
1956 else
1957 if test ! -r ${PKG_GROUPS} ; then
1958 echo "Error: can't read package groups info from PKG_GROUPS=\"$PKG_GROUPS\""
1959 exit 1
1960 fi
1961 echo " getting package groups info from $PKG_GROUPS"
1962 fi
1963
1964 # Search for packages to compile.
1965 echo " checking list of packages to compile:"
1966 PKG_LIST=
1967 if test "x${PKG_LIST}" = x ; then
1968 for i in "." $MODS ; do
1969 if test -r $i"/packages.conf" ; then
1970 PKG_LIST=$i"/packages.conf"
1971 break
1972 fi
1973 done
1974 fi
1975 if test "x${PKG_LIST}" = x ; then
1976 pkg_list='default_pkg_list'
1977 if test "x${PKG_GROUPS}" = x ; then
1978 echo "Error: need package groups info to expand pkg_list=\"$pkg_list\""
1979 exit 1
1980 fi
1981 else
1982 if test ! -r $PKG_LIST ; then
1983 echo "Error: can't read package list from PKG_LIST=\"$PKG_LIST\""
1984 exit 1
1985 else
1986 echo " using PKG_LIST=\"$PKG_LIST\""
1987 # Strip the comments and add all the names
1988 pkg_list=`cat $PKG_LIST | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1989 RETVAL=$?
1990 if test "x${RETVAL}" != x0 ; then
1991 printf "Error: can't parse package list "
1992 echo "-- please check PKG_LIST=\"$PKG_LIST\""
1993 exit 1
1994 fi
1995 fi
1996 fi
1997 for i in $pkg_list ; do
1998 PACKAGES="$PACKAGES $i"
1999 done
2000 echo " before group expansion packages are:$PACKAGES"
2001 if test "x${PKG_GROUPS}" != x ; then
2002 RET=1
2003 while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
2004 echo " after group expansion packages are: $PACKAGES"
2005 fi
2006
2007 echo " applying DISABLE settings"
2008 echo "" > ./.tmp_pack
2009 for i in $PACKAGES ; do
2010 echo $i >> ./.tmp_pack
2011 done
2012 for i in `grep "-" ./.tmp_pack` ; do
2013 j=`echo $i | sed 's/[-]//'`
2014 DISABLE="$DISABLE $j"
2015 done
2016 pack=
2017 for p in $PACKAGES ; do
2018 addit="t"
2019 for d in $DISABLE ; do
2020 if test "x$p" = "x$d" ; then
2021 addit="f"
2022 fi
2023 done
2024 if test "x$addit" = xt ; then
2025 pack="$pack $p"
2026 fi
2027 done
2028 PACKAGES="$pack"
2029 echo " applying ENABLE settings"
2030 echo "" > ./.tmp_pack
2031 PACKAGES="$PACKAGES $ENABLE"
2032 # Test if each explicitly referenced package exists
2033 for i in $PACKAGES ; do
2034 j=`echo $i | sed 's/[-+]//'`
2035 if test ! -d "$ROOTDIR/pkg/$j" ; then
2036 echo "Error: dir '$ROOTDIR/pkg/$i' missing for package '$i'"
2037 exit 1
2038 fi
2039 echo $i >> ./.tmp_pack
2040 done
2041 PACKAGES=
2042 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
2043 PACKAGES="$PACKAGES $i"
2044 done
2045 rm -f ./.tmp_pack
2046 echo " packages are: $PACKAGES"
2047
2048 # Check for package MNC: if NetCDF is available, then build the MNC
2049 # template files ; otherwise, delete mnc from the list of packages.
2050 echo " $PACKAGES " | grep ' mnc ' > /dev/null 2>&1
2051 mnc_in=$?
2052 if test "x$HAVE_NETCDF" != xt ; then
2053 if test "x$mnc_in" = x0 ; then
2054 cat <<EOF
2055 *********************************************************************
2056 WARNING: the "mnc" package was enabled but tests failed to compile
2057 NetCDF applications. Please check that:
2058
2059 1) NetCDF is correctly installed for this compiler and
2060 2) the LIBS variable (within the "optfile") specifies the correct
2061 NetCDF library to link against.
2062
2063 Due to this failure, the "mnc" package is now DISABLED.
2064 *********************************************************************
2065 EOF
2066 PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
2067 DISABLE="$DISABLE mnc"
2068 else
2069 # this prevent to add mnc (due to pdepend rules) if not available
2070 DISABLE="$DISABLE mnc"
2071 fi
2072 else
2073 # we have NetCDF, we try to build MNC template files
2074 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
2075 RETVAL=$?
2076 if test "x${RETVAL}" = x0 ; then
2077 rm -f make_mnc.errors
2078 else
2079 echo "Error: problem encountered while building source files in pkg/mnc:"
2080 cat make_mnc.errors 1>&2
2081 if test "x$mnc_in" = x0 ; then
2082 exit 1
2083 else
2084 DISABLE="$DISABLE mnc"
2085 fi
2086 fi
2087 fi
2088
2089 # Check for package PROFILES: if NetCDF is not available,
2090 # then delete profiles from the list of available packages.
2091 if test "x$HAVE_NETCDF" != xt ; then
2092 echo " $PACKAGES " | grep ' profiles ' > /dev/null 2>&1
2093 RETVAL=$?
2094 if test "x$RETVAL" = x0 ; then
2095 cat <<EOF
2096 *********************************************************************
2097 WARNING: the "profiles" package was enabled but tests failed to
2098 compile NetCDF applications. Please check that:
2099
2100 1) NetCDF is correctly installed for this compiler and
2101 2) the LIBS variable (within the "optfile") specifies the correct
2102 NetCDF library to link against.
2103
2104 Due to this failure, the "profiles" package is now DISABLED.
2105 *********************************************************************
2106 EOF
2107 PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2108 DISABLE="$DISABLE profiles"
2109 else
2110 # this prevent to add profiles (due to pdepend rules) if not available
2111 DISABLE="$DISABLE profiles"
2112 fi
2113 fi
2114
2115 if test "x${PKG_DEPEND}" != x ; then
2116 echo " applying package dependency rules"
2117 ck=
2118 while test "x$ck" != xtt ; do
2119 i=0
2120 # rtot=${#PNAME[@]}
2121 rtot=$nname
2122 while test $i -le $rtot ; do
2123
2124 # Is $pname in the current $PACKAGES list?
2125 # pname=${PNAME[$i]}
2126 tmp="pname=\"\$PNAME_$i\""
2127 eval $tmp
2128 pin="f"
2129 for p in $PACKAGES ; do
2130 if test "x$p" = "x$pname" ; then
2131 pin="t"
2132 fi
2133 done
2134 # or in the current $STANDARDDIRS list?
2135 for p in $STANDARDDIRS ; do
2136 if test "x$p" = "x$pname" ; then pin="t" ; fi
2137 done
2138
2139 # Is the DNAME entry a (+) or (-) rule ?
2140 tmp="dname=\"\$DNAME_$i\""
2141 eval $tmp
2142 plus="-"
2143 echo $dname | grep '^+' > /dev/null 2>&1
2144 RETVAL=$?
2145 if test "x$RETVAL" = x0 ; then
2146 plus="+"
2147 fi
2148
2149 # Is $dname in the current $PACKAGES list?
2150 dname=`echo $dname | sed -e 's/^[+-]//'`
2151 din="f"
2152 for p in $PACKAGES ; do
2153 if test "x$p" = "x$dname" ; then
2154 din="t"
2155 fi
2156 done
2157
2158 # Do we need to add $dname according to the dependency rules?
2159 if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2160 #echo " " $pname ": need to add :" $dname
2161 in_dis="f"
2162 for dis in $DISABLE ; do
2163 if test "x$dis" = "x$dname" ; then
2164 in_dis="t"
2165 fi
2166 done
2167 if test "x$in_dis" = xt ; then
2168 echo "Error: can't satisfy package dependencies:"
2169 echo " \"$dname\" is required by the dependency rules"
2170 echo " but is disallowed by the DISABLE settings"
2171 exit 1
2172 else
2173 PACKAGES="$PACKAGES $dname"
2174 ck=
2175 fi
2176 fi
2177
2178 # Do we need to get rid of $dname according to the dependency rules?
2179 if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
2180 echo "Error: can't satisfy package dependencies:"
2181 echo " \"$pname\" was requested but is disallowed by"
2182 echo " the dependency rules for \"$dname\""
2183 exit 1
2184 fi
2185 i=`echo "$i + 1" | bc -l`
2186 #i=$(( $i + 1 ))
2187 done
2188 ck=$ck"t"
2189 done
2190 echo " packages are: $PACKAGES"
2191 fi
2192 for i in $PACKAGES ; do
2193 adr="$ROOTDIR/pkg/$i"
2194 if test -d $adr ; then
2195 SOURCEDIRS="$SOURCEDIRS $adr"
2196 INCLUDEDIRS="$INCLUDEDIRS $adr"
2197 if test "x$i" = xautodiff ; then
2198 AUTODIFF_PKG_USED=t
2199 fi
2200 else
2201 echo "Error: the directory \"$adr\" for package $i doesn't exist"
2202 exit 1
2203 fi
2204 done
2205
2206 # Create a list of #define and #undef to enable/disable packages
2207 PACKAGES_DOT_H=PACKAGES_CONFIG.h
2208 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2209 # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2210 # file would eventually be split up so that all package-related #define
2211 # statements could be separated and handled only by genmake.
2212 names=`ls -1 "$ROOTDIR/pkg"`
2213 all_pack=
2214 DISABLED_PACKAGES=
2215 for n in $names ; do
2216 if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2217 has_pack="f"
2218 for pack in $PACKAGES ; do
2219 if test "x$pack" = "x$n" ; then
2220 has_pack="t"
2221 break
2222 fi
2223 done
2224 if test "x$has_pack" = xf ; then
2225 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2226 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2227 fi
2228 fi
2229 done
2230 ENABLED_PACKAGES=
2231 for i in $PACKAGES ; do
2232 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2233 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2234 #eh3 DEFINES="$DEFINES -D$def"
2235
2236 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2237 case $i in
2238 aim_v23)
2239 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2240 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2241 ;;
2242 esac
2243 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2244
2245 done
2246
2247 echo " Adding STANDARDDIRS='$STANDARDDIRS'"
2248 BUILDDIR=${BUILDDIR:-.}
2249 if test "x$STANDARDDIRS" != x ; then
2250 for d in $STANDARDDIRS ; do
2251 adr="$ROOTDIR/$d/src"
2252 if test ! -d $adr ; then
2253 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2254 echo " is correct and that you correctly specified the STANDARDDIRS option"
2255 exit 1
2256 else
2257 SOURCEDIRS="$SOURCEDIRS $adr"
2258 fi
2259 adr="$ROOTDIR/$d/inc"
2260 if test ! -d $adr ; then
2261 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2262 echo " is correct and that you correctly specified the STANDARDDIRS option"
2263 exit 1
2264 else
2265 INCLUDEDIRS="$INCLUDEDIRS $adr"
2266 fi
2267 done
2268 fi
2269
2270 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2271 echo " of \"#define \"-type statements that are no longer allowed:"
2272 CPP_OPTIONS=
2273 CPP_EEOPTIONS=
2274 spaths=". $INCLUDEDIRS"
2275 names=`ls -1 "$ROOTDIR/pkg"`
2276 for i in $spaths ; do
2277 try="$i/CPP_OPTIONS.h"
2278 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2279 echo " found CPP_OPTIONS=\"$try\""
2280 CPP_OPTIONS="$try"
2281 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2282 for n in $names ; do
2283 test_for_package_in_cpp_options $CPP_OPTIONS $n
2284 done
2285 fi
2286 try="$i/CPP_EEOPTIONS.h"
2287 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2288 echo " found CPP_EEOPTIONS=\"$try\""
2289 # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2290 #**** not yet enabled ****
2291 # test_for_mpi_in_cpp_eeoptions $try
2292 #**** not yet enabled ****
2293 CPP_EEOPTIONS="$try"
2294 fi
2295 done
2296 if test "x$CPP_OPTIONS" = x ; then
2297 echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2298 exit 1
2299 fi
2300
2301 # Here, we build the list of files to be "run through" the adjoint
2302 # compiler.
2303 if test -f ./adSrcFiles.tmp ; then
2304 rm -f ./adSrcFiles.tmp
2305 fi
2306 echo " Creating the list of files for the adjoint compiler."
2307 touch adSrcFiles.tmp
2308 for i in $SOURCEDIRS ; do
2309 list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2310 for j in $list_files ; do
2311 cat $i/$j >> adSrcFiles.tmp
2312 done
2313 done
2314 if test ! "x"$FS = "x.f" ; then
2315 cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f
2316 mv -f adSrcFiles.tmp_f adSrcFiles.tmp
2317 fi
2318
2319 echo
2320 echo "=== Creating the Makefile ==="
2321 echo " setting INCLUDES"
2322 for i in $INCLUDEDIRS ; do
2323 if test ! -d $i ; then
2324 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2325 fi
2326 done
2327
2328 if test ! "x$DIVA" = x ; then
2329 echo " Creating the pseudo-MPI include directory"
2330 INCLUDES="-I./mpi_headers $INCLUDES"
2331 rm -rf ./mpi_headers
2332 mkdir -p ./mpi_headers
2333
2334 if test "x$MPIINCLUDEDIR" = x ; then
2335 if test "x$MPIHOME" = x ; then
2336 MPIHOME='/usr'
2337 fi
2338 MPIINCLUDEDIR='$MPIHOME/include'
2339 fi
2340
2341 if test -r $MPIINCLUDEDIR/mpif.h ; then
2342 for i in $MPI_HEADER_FILES; do
2343 cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2344 done
2345
2346 perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2347 else
2348 echo " We cannot create a copy of mpif.h!"
2349 # exit -1
2350 fi
2351 fi
2352
2353 echo " Determining the list of source and include files"
2354 rm -rf .links.tmp
2355 mkdir .links.tmp
2356 touch .links.tmp/foo
2357 if test ! -r ".links.tmp/foo" ; then
2358 echo
2359 echo "ERROR : something is wrong with your directory permissions or"
2360 echo " your user file-creation mask (\"umask\") since creating a"
2361 echo " sub-dir, touch-ing a file within it, and then reading it is"
2362 echo " not working. Please try setting your umask to something"
2363 echo " sane such as:"
2364 echo
2365 echo " umask 0002"
2366 echo
2367 echo " and please verify that you have the proper permissions for"
2368 echo " creating sub-directories and then reading files created"
2369 echo " within them."
2370 echo
2371 exit 1
2372 fi
2373 rm -f .links.tmp/foo
2374
2375 if test "x$OPENAD" != x ; then
2376 OAD_DONT_COMPILE="/dev/null"
2377 OAD_DONT_TRANSFORM="/dev/null"
2378 OAD_KEEP_ORIGINAL="/dev/null"
2379 OAD_CB2M_FILES="/dev/null"
2380 echo " looking for dontCompile file: "
2381 for i in "." $MODS ; do
2382 if test -r $i"/dontCompile" ; then
2383 OAD_DONT_COMPILE=$i"/dontCompile"
2384 echo " found $OAD_DONT_COMPILE"
2385 break
2386 fi
2387 done
2388 echo " looking for dontTransform file: "
2389 for i in "." $MODS ; do
2390 if test -r $i"/dontTransform" ; then
2391 OAD_DONT_TRANSFORM=$i"/dontTransform"
2392 echo " found $OAD_DONT_TRANSFORM"
2393 break
2394 fi
2395 done
2396 echo " looking for keepOriginal file: "
2397 for i in "." $MODS ; do
2398 if test -r $i"/keepOriginal" ; then
2399 OAD_KEEP_ORIGINAL=$i"/keepOriginal"
2400 echo " found $OAD_KEEP_ORIGINAL"
2401 break
2402 fi
2403 done
2404 echo " looking for cb2mFiles: "
2405 for i in "." $MODS ; do
2406 if test -r $i"/cb2mFiles" ; then
2407 OAD_CB2M_FILES=$i"/cb2mFiles"
2408 echo " found $OAD_CB2M_FILES"
2409 break
2410 fi
2411 done
2412 echo " OpenAD exceptions: "
2413 fi
2414
2415 echo "# This section creates symbolic links" > srclinks.tmp
2416 echo "" >> srclinks.tmp
2417 printf 'F77_SRC_FILES = ' > F77srclist.tmp
2418 printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp
2419 printf 'C_SRC_FILES = ' > csrclist.tmp
2420 printf 'F90_SRC_FILES = ' > F90srclist.tmp
2421 printf 'H_SRC_FILES = ' > hsrclist.tmp
2422 printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp
2423 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2424 for d in $alldirs ; do
2425 deplist=
2426 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2427 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2428 if test "x$OPENAD" != x ; then
2429 sfiles=`( echo $sfiles | grep -v _cb2m\. )`
2430 fi
2431 for sf in $sfiles ; do
2432 if test ! -r ".links.tmp/$sf" ; then
2433 if test -f "$d/$sf" ; then
2434 ignore_f=f
2435 case $d/$sf in
2436 ./$PACKAGES_DOT_H)
2437 ignore_f=t
2438 ;;
2439 ./AD_CONFIG.h)
2440 ignore_f=t
2441 ;;
2442 ./FC_NAMEMANGLE.h)
2443 ignore_f=t
2444 ;;
2445 ./BUILD_INFO.h)
2446 ignore_f=t
2447 ;;
2448 ./EMBEDDED_FILES.h)
2449 ignore_f=t
2450 ;;
2451 *)
2452 # For the local directory *ONLY*,
2453 # ignore all soft-links
2454 if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2455 ignore_f=t
2456 else
2457 touch .links.tmp/$sf
2458 deplist="$deplist $sf"
2459 fi
2460 ;;
2461 esac
2462 if test "x$ignore_f" = xf ; then
2463 extn=`echo $sf | $AWK -F. '{print $NF}'`
2464 case $extn in
2465 F)
2466 echo " \\" >> F77srclist.tmp
2467 printf " $sf" >> F77srclist.tmp
2468 if test "x$OPENAD" != x ; then
2469 basename=${sf%%.F}
2470 isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp`
2471 if test -z "$isAD" ; then
2472 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}`
2473 if test -z "$toBeIgnored" ; then
2474 echo " \\" >> nonADF77srclist.tmp
2475 printf " $sf" >> nonADF77srclist.tmp
2476 else
2477 echo " not to be compiled : $sf"
2478 fi
2479 else # file is initially listed as an AD file we want to exclude it
2480 # or we want to retain the untransformed version
2481 notToBeTransformed=`egrep ^$basename'[ ]*' ${OAD_DONT_TRANSFORM}`
2482 untransformedVersionToBeKept=`egrep ^$basename'[ ]*' ${OAD_KEEP_ORIGINAL}`
2483 if test -n "$notToBeTransformed"; then
2484 echo " not to be transformed: $sf"
2485 fi
2486 if test -n "$untransformedVersionToBeKept" ; then
2487 echo " original to be kept : $sf"
2488 fi
2489 if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then
2490 echo " \\" >> nonADF77srclist.tmp
2491 printf " $sf" >> nonADF77srclist.tmp
2492 fi
2493 fi
2494 fi
2495 ;;
2496 F90)
2497 echo " \\" >> F90srclist.tmp
2498 printf " $sf" >> F90srclist.tmp
2499 ;;
2500 c)
2501 echo " \\" >> csrclist.tmp
2502 printf " $sf" >> csrclist.tmp
2503 ;;
2504 h)
2505 echo " \\" >> hsrclist.tmp
2506 printf " $sf" >> hsrclist.tmp
2507 ;;
2508 flow)
2509 echo " \\" >> ad_flow_files.tmp
2510 printf " $sf" >> ad_flow_files.tmp
2511 ;;
2512 esac
2513 fi
2514 fi
2515 fi
2516 done
2517 if test "x$deplist" != x ; then
2518 if test "$d" != "." ; then
2519 echo "" >> srclinks.tmp
2520 echo "# These files are linked from $d" >> srclinks.tmp
2521 echo "$deplist :" >> srclinks.tmp
2522 # We need to make sure that the link isn't already there.
2523 # This may happen when make thinks that a header file has to be "remade"
2524 # because a module it depends on has changed. In this case we do nothing.
2525 printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp
2526 fi
2527 fi
2528 done
2529 rm -rf .links.tmp
2530 echo "" >> F77srclist.tmp
2531 echo "" >> nonADF77srclist.tmp
2532 echo "" >> csrclist.tmp
2533 echo "" >> F90srclist.tmp
2534 echo "" >> hsrclist.tmp
2535 echo "" >> ad_flow_files.tmp
2536
2537 CMDLINE=$0
2538 for xx in "$@" ; do nw=`echo $xx | wc -w`
2539 if test $nw = '1' ; then CMDLINE="$CMDLINE $xx"
2540 else CMDLINE="$CMDLINE '$xx'" ; fi
2541 done
2542
2543 if test -f $MAKEFILE ; then
2544 mv -f $MAKEFILE "$MAKEFILE.old"
2545 fi
2546 echo " Writing makefile: $MAKEFILE"
2547 echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2548 echo "# $MACHINE" >> $MAKEFILE
2549 echo "# This makefile was generated automatically on" >> $MAKEFILE
2550 echo "# $THISDATE" >> $MAKEFILE
2551 echo "# by the command:" >> $MAKEFILE
2552 echo "# $CMDLINE" >> $MAKEFILE
2553 echo "# executed by:" >> $MAKEFILE
2554 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2555
2556 EXE_AD=$EXECUTABLE"_ad"
2557 EXE_FTL=$EXECUTABLE"_ftl"
2558 EXE_SVD=$EXECUTABLE"_svd"
2559
2560 cat >>$MAKEFILE <<EOF
2561 #
2562 # OPTFILE="$OPTFILE"
2563 #
2564 # BUILDDIR : Directory where object files are written
2565 # SOURCEDIRS : Directories containing the source (.F) files
2566 # INCLUDEDIRS : Directories containing the header-source (.h) files
2567 # EXEDIR : Directory where executable that is generated is written
2568 # EXECUTABLE : Full path of executable binary
2569 #
2570 # CPP : C-preprocessor command
2571 # INCLUDES : Directories searched for header files
2572 # DEFINES : Macro definitions for CPP
2573 # MAKEDEPEND : Dependency generator
2574 # KPP : Special preprocessor command (specific to platform)
2575 # KFLAGS : Flags for KPP
2576 # FC : Fortran compiler command
2577 # FFLAGS : Configuration/debugging options for FC
2578 # FOPTIM : Optimization options for FC
2579 # LINK : Command for link editor program
2580 # LIBS : Library flags /or/ additional optimization/debugging flags
2581
2582 ROOTDIR = ${ROOTDIR}
2583 BUILDDIR = ${BUILDDIR}
2584 SOURCEDIRS = ${SOURCEDIRS}
2585 INCLUDEDIRS = ${INCLUDEDIRS}
2586 EXEDIR = ${EXEDIR}
2587 EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2588 TOOLSDIR = ${TOOLSDIR}
2589
2590 #eh3 new defines for the adjoint work
2591 AUTODIFF = ${ROOTDIR}/pkg/autodiff
2592 EXE_AD = ${EXE_AD}
2593 EXE_FTL = ${EXE_FTL}
2594 EXE_SVD = ${EXE_SVD}
2595
2596 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2597 DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2598
2599 # These files are created by Makefile
2600 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2601 EOF
2602
2603 if test "x$EMBED_SRC" = xt ; then
2604 echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2605 else
2606 echo "EMBEDDED_FILES = " >>$MAKEFILE
2607 fi
2608
2609 cat >>$MAKEFILE <<EOF
2610 # Unix ln (link)
2611 LN = ${LN}
2612 # C preprocessor
2613 CPP = cat \$< | ${S64} | ${CPP}
2614 # Dependency generator
2615 MAKEDEPEND = ${MAKEDEPEND}
2616 # Special preprocessor (KAP on DECs, FPP on Crays)
2617 KPP = ${KPP}
2618 # Fortran compiler
2619 FC = ${FC}
2620 # Fortran compiler
2621 F90C = ${F90C}
2622 # C compiler
2623 CC = ${CC}
2624 # Link editor
2625 LINK = ${LINK} ${LDADD}
2626
2627 # Defines for CPP
2628 DEFINES = ${DEFINES}
2629 # Includes for CPP
2630 INCLUDES = ${INCLUDES}
2631 # Flags for KPP
2632 KFLAGS1 = ${KFLAGS1}
2633 KFLAGS2 = ${KFLAGS2}
2634 # Optim./debug for FC
2635 FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2636 FOPTIM = ${FOPTIM}
2637 # Optim./debug for FC
2638 F90FLAGS = ${F90FLAGS}
2639 F90OPTIM = ${F90OPTIM}
2640 F90FIXEDFORMAT = ${F90FIXEDFORMAT}
2641 # Flags for CC
2642 CFLAGS = ${CFLAGS}
2643 # Files that should not be optimized
2644 NOOPTFILES = ${NOOPTFILES}
2645 NOOPTFLAGS = ${NOOPTFLAGS}
2646 # Flags and libraries needed for linking
2647 LIBS = ${LIBS}
2648 # Name of the Mekfile
2649 MAKEFILE=${MAKEFILE}
2650
2651 EOF
2652
2653 cat F77srclist.tmp >> $MAKEFILE
2654 cat nonADF77srclist.tmp >> $MAKEFILE
2655 cat csrclist.tmp >> $MAKEFILE
2656 cat F90srclist.tmp >> $MAKEFILE
2657 cat hsrclist.tmp >> $MAKEFILE
2658 cat ad_flow_files.tmp >> $MAKEFILE
2659
2660 rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp
2661
2662 echo >> $MAKEFILE
2663
2664 # add definitions for preprocessed sources
2665 # and note that not all systems allow case sensitive extensions
2666 # hence the $FS and $FS90 here.
2667 # for fixed format f90 files we use ff90 or FF90 resp
2668 # but these are not expected to be the original source files
2669
2670 echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')' >> $MAKEFILE
2671 echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE
2672 echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE
2673 echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE
2674 echo >> $MAKEFILE
2675 echo '.SUFFIXES:' >> $MAKEFILE
2676 echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE
2677
2678 cat >>$MAKEFILE <<EOF
2679
2680 all: \$(EXECUTABLE)
2681 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2682 @echo Creating \$@ ...
2683 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2684 depend:
2685 @make links
2686 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2687 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2688 -rm -f makedepend.out
2689
2690 lib: libmitgcmuv.a
2691
2692 libmitgcmuv.a: \$(OBJFILES)
2693 ar rcv libmitgcmuv.a \$(OBJFILES)
2694 ar d libmitgcmuv.a main.o
2695
2696 links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES)
2697
2698 small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
2699
2700 output.txt: \$(EXECUTABLE)
2701 @printf 'running ... '
2702 @\$(EXECUTABLE) > \$@
2703
2704 # remove most of the files that "make" generates
2705 clean:
2706 -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2707 -rm -rf *.o
2708 -rm -rf *.$FS *.flowdir
2709 -rm -rf *.f$FS90 \$(AD_CLEAN) ad_input*
2710
2711 # remove most of the files that "make" and "make depend" generate
2712 Clean:
2713 @make clean
2714 @make cleanlinks
2715 -rm -f \$(SPECIAL_FILES) f90mkdepend.log $MAKEFILE.old
2716 -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2717 -rm -f genmake_warnings genmake_errors make.log
2718
2719 # remove also the executable, files that "genmake2" generates (except Makefile)
2720 # and output from a run (plus log files from testreport)
2721 CLEAN:
2722 @make Clean
2723 -rm -f \$(EXECUTABLE) \$(EXE_AD) *.bak
2724 -rm -f $LOGFILE genmake_state genmake_*optfile
2725 -rm -f SIZE.h.mpi genmake.tr_log make.tr_log
2726 -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2727 -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2728 -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2729 -rm -f *.txt STD* *diagnostics.log datetime
2730 -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2731 -rm -rf mnc_test_*
2732
2733 makefile:
2734 $THIS_SCRIPT $G2ARGS
2735 cleanlinks:
2736 -find . -type l -exec rm {} \;
2737
2738 # Special targets (SPECIAL_FILES) which are created by make
2739 ${PACKAGES_DOT_H}:
2740 @echo Creating \$@ ...
2741 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2742 AD_CONFIG.h:
2743 @echo Creating \$@ ...
2744 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2745 FC_NAMEMANGLE.h:
2746 @echo Creating \$@ ...
2747 echo "$FC_NAMEMANGLE" > \$@
2748
2749 BUILD_INFO.h:
2750 @echo Creating \$@ ...
2751 EOF
2752
2753 test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2754 test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2755 test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2756 test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2757
2758 if test "x$EMBED_SRC" = xt ; then
2759 cat >>$MAKEFILE <<EOF
2760
2761 decode_files.o : EMBEDDED_FILES.h
2762
2763 ## \$(F77_PP_SRC_FILES)
2764 all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2765 @echo Creating \$@ ...
2766 -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2767 -rm -f all_fF.tar.gz
2768 -gzip all_fF.tar
2769
2770 EMBEDDED_FILES.h : all_fF.tar.gz
2771 @echo Creating \$@ ...
2772 -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2773
2774 EOF
2775 fi
2776
2777 cat >>$MAKEFILE <<EOF
2778
2779 # The normal chain of rules is ( .F - .$FS - .o )
2780
2781 ## This nullifies any default implicit rules concerning these two file types:
2782 ## %.o : %.F
2783
2784 .F.$FS:
2785 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2786 .$FS.o:
2787 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2788 .F.o:
2789 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2790 .F90.$FS90:
2791 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2792 .FF90.f$FS90:
2793 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2794 .$FS90.o:
2795 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2796 .f$FS90.o:
2797 cp \$< \$(basename \$<).f90
2798 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$(basename \$<).f90
2799 .c.o:
2800 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2801 .flow.flowdir:
2802 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2803
2804 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2805 .F.p:
2806 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2807 .p.$FS:
2808 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2809
2810 EOF
2811
2812 #=========================================
2813 #=== Automatic Differentiation Rules ===
2814 #=== for TAMC/TAF ======================
2815
2816 if test "x$OPENAD" = x ; then
2817
2818 cat >>$MAKEFILE <<EOF
2819
2820 TAMC = ${TAMC}
2821 TAF = ${TAF}
2822
2823 TAF_EXTRA = ${TAF_EXTRA}
2824 TAMC_EXTRA = ${TAMC_EXTRA}
2825
2826 EOF
2827
2828 ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2829 ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2830 ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2831 for i in $ad_vars ; do
2832 name=$i
2833 t1="t2=\$"`echo "$i"`
2834 eval $t1
2835 printf "%-20s = " $name >> $MAKEFILE
2836 echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2837 done
2838
2839 echo " Add the source list for AD code generation"
2840 echo >> $MAKEFILE
2841 printf "AD_FILES = " >> $MAKEFILE
2842 AD_FILES=`cat adSrcFiles.tmp`
2843 for i in $AD_FILES ; do
2844 echo " \\" >> $MAKEFILE
2845 printf " $i" >> $MAKEFILE
2846 done
2847 echo >> $MAKEFILE
2848 rm -f adSrcFiles.tmp
2849
2850 cat >>$MAKEFILE <<EOF
2851
2852 # ... AD ...
2853 adall: \$(EXE_AD)
2854 adtaf: ad_taf_output.$FS
2855 adtamc: ad_tamc_output.$FS
2856
2857 ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES) \$(AD_FLOW_FILES)
2858 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2859 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2860 -rm -f ad_config.template
2861 @make \$(F77_PP_SRC_FILES)
2862 @make \$(FLOFILES)
2863 cat \$(FLOFILES) \$(AD_FILES) | sed -f \$(TOOLSDIR)/remove_comments_sed > ad_input_code.$FS
2864
2865 ad_taf_output.$FS: ad_input_code.$FS
2866 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2867 ls -l ad_input_code_ad.$FS
2868 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2869
2870 adtafonly:
2871 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2872 ls -l ad_input_code_ad.$FS
2873 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2874
2875 \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2876 \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2877
2878 ad_tamc_output.$FS: ad_input_code.$FS
2879 \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2880 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2881
2882 ad_tamc: ad_tamc_output.o \$(OBJFILES)
2883 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2884
2885 adonlyfwd:
2886 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2887
2888 adtrick:
2889 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2890
2891 # ... FTL ...
2892 ftlall: ftl_taf
2893 ftltaf: ftl_taf_output.$FS
2894 ftltamc: ftl_tamc_output.$FS
2895
2896 ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2897 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2898 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2899 -rm -f ftl_config.template
2900 @make \$(F77_PP_SRC_FILES)
2901 @make \$(AD_FLOW_FILES)
2902 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2903
2904 ftl_taf_output.$FS: ftl_input_code.$FS
2905 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2906 ls -l ftl_input_code_ftl.$FS
2907 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2908
2909 ftltafonly:
2910 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2911 ls -l ftl_input_code_ftl.$FS
2912 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2913
2914 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2915 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2916
2917 ftl_tamc_output.$FS: ftl_input_code.$FS
2918 \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2919 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2920
2921 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2922 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2923
2924 # ... SVD ...
2925 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2926 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2927 @echo "--->>> Do make svdall afterwards to compile. <<<---"
2928 svdall: svd_touch svd_taf
2929
2930 svd_taf: \$(OBJFILES)
2931 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2932
2933 @echo "--->>> Only COMPILE svd code! <<<---"
2934 @echo "--->>> Assumes you previously <<<---"
2935 @echo "--->>> did make svdtaf <<<---"
2936
2937 svd_touch:
2938 @echo "--->>> Only COMPILE svd code! <<<---"
2939 @echo "--->>> Assumes you previously <<<---"
2940 @echo "--->>> did make svdtaf <<<---"
2941 touch ad_taf_output.$FS ftl_taf_output.$FS
2942 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2943 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2944 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2945 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2946 -rm -f ftl_config.template
2947
2948 EOF
2949
2950 fi
2951
2952 #=== for OpenAD ========================
2953
2954 if test "x$OPENAD" != x ; then
2955
2956 # ============ begin OpenAD specific section ==============
2957
2958 cat >>$MAKEFILE <<EOF
2959
2960 # all the source files linked from the various locations:
2961 ALL_LINKED_FILES= \
2962 \$(F77_SRC_FILES) \
2963 \$(C_SRC_FILES) \
2964 \$(H_SRC_FILES) \
2965 \$(F90_SRC_FILES) \
2966 \$(SPECIAL_FILES)
2967
2968 ifndef OPENADROOT
2969 \$(error "Error: environment variable OPENADROOT not defined!")
2970 endif
2971
2972 ifndef XAIFSCHEMAROOT
2973 \$(error "Error: environment variable XAIFSCHEMAROOT not defined!")
2974 endif
2975
2976 ifndef XAIFBOOSTERROOT
2977 \$(error "Error: environment variable XAIFBOOSTERROOT not defined!")
2978 endif
2979
2980 EOF
2981
2982 echo " Add the source list for common block to module conversion "
2983 echo >> $MAKEFILE
2984 printf "CB2M_F90_SRC_NAMES = " >> $MAKEFILE
2985 for i in `cat ${OAD_CB2M_FILES}` ; do
2986 echo " \\" >> $MAKEFILE
2987 printf " $i" >> $MAKEFILE
2988 done
2989 echo >> $MAKEFILE
2990
2991 echo " Add the source list for AD code generation"
2992 echo >> $MAKEFILE
2993 printf "AD_FILES = " >> $MAKEFILE
2994 for i in `cat ${OAD_CB2M_FILES}` ; do
2995 echo " \\" >> $MAKEFILE
2996 printf " ${i}_mod.f$FS90" >> $MAKEFILE
2997 done
2998 AD_FILES=`cat adSrcFiles.tmp`
2999 for i in $AD_FILES ; do
3000 basename=${i%%.f}
3001 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}`
3002 if test -z "$toBeIgnored" ; then
3003 echo " \\" >> $MAKEFILE
3004 printf " $i" >> $MAKEFILE
3005 fi
3006 done
3007 echo >> $MAKEFILE
3008 rm -f adSrcFiles.tmp
3009
3010 cat >>$MAKEFILE <<EOF
3011
3012 adAll: \$(EXE_AD)
3013 .PHONY: adAll
3014
3015 CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
3016
3017 .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)
3018
3019 .PHONY: adDepend
3020 adDepend: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(addsuffix _mod.FF90, \$(CB2M_F90_SRC_NAMES)) \$(F77_SRC_FILES:.F=_cb2m.FF90)
3021 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
3022 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
3023 -rm -f makedepend.out
3024
3025 OPENAD_SUPPORT_F90_SRC_FILES = \
3026 w2f__types.F90 \
3027 OAD_active.F90 \
3028 OAD_cp.F90 \
3029 OAD_rev.F90 \
3030 OAD_tape.F90
3031
3032 OPENAD_SUPPORT_C_SRC_FILES = \
3033 iaddr.c \
3034 timeRatio.c
3035
3036 f95_test_mods.f90: \$(OPENAD_SUPPORT_F90_SRC_FILES:F90=$FS90)
3037 cat \$^ > \$@
3038
3039 f95_test.f90: all_mods.xb.x2w.w2f.pp.f$FS90 \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3040 cat \$^ > \$@
3041
3042 f95_test.out: f95_test_mods.f90 f95_test.f90
3043 f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1
3044 f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1
3045
3046 # the file included below is created by the
3047 # postProcessor and its inclusion sets the
3048 # variable POSTPROCESSEDFILES
3049 # used below. Because the file is made during
3050 # make it won't be read until the second (recursive)
3051 # invocation in the rule below
3052 -include postProcess.make
3053
3054 AD_OBJ_FILES_S1=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) \$(POSTPROCESSEDFILES:.f$FS90=.o)
3055
3056 AD_OBJ_FILES_S2=\$(AD_OBJ_FILES_S1) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o)
3057
3058 postProcess.comp: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.tag \$(AD_OBJ_FILES_S1)
3059 ifeq (\$(MAKELEVEL),0)
3060 \$(MAKE) adAll
3061 else
3062 touch \$@
3063 endif
3064
3065 \$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) postProcess.comp \$(AD_OBJ_FILES_S2)
3066 ifeq (\$(MAKELEVEL),1)
3067 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES_S2) \$(LIBS)
3068 else
3069 touch \$@
3070 endif
3071
3072 # makefile debug rule
3073 openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3074 .PHONY: openad
3075
3076 # create the module files
3077 %_mod.FF90 : %.h ../OAD_support/cb2mGetModules.csh ../OAD_support/cb2mGetModules.awk
3078 ../OAD_support/cb2mGetModules.csh $< ../OAD_support/cb2mGetModules.awk
3079
3080 # create the header files
3081 %_mod.h : %.h ../OAD_support/cb2mGetHeaders.csh ../OAD_support/cb2mGetHeaders.awk
3082 ../OAD_support/cb2mGetHeaders.csh $< ../OAD_support/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES)
3083
3084 # change everybody else to use the new module files:
3085 %_cb2m.FF90 : %.F ../OAD_support/cb2mUseModules.bash
3086 ../OAD_support/cb2mUseModules.bash $< ${MPI}
3087
3088 # makefile debug rule
3089 small_f: \$(CB2M_F90_PP_SRC_FILES)
3090 .PHONY: small_f
3091
3092 ad_output.txt: \$(EXE_AD)
3093 @printf 'linking data files ... '
3094 \$(LN) -f ../input_ad/data* ../input_ad/eedata .
3095 \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .
3096 @printf 'running ... '
3097 @./\$(EXE_AD) > \$@
3098
3099 CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90)
3100 ad_input_code.f$FS90: \$(CB2M_AD_FILES)
3101 cat \$^ > \$@
3102
3103 # strip all comments and blanks to reduce
3104 # the file size in order to reduce perl's memory requirements
3105 ad_input_code_sf.f$FS90 : ad_input_code.f$FS90
3106 cat \$^ | sed -f ../OAD_support/strip.sed | sed -f ../OAD_support/stop2print.sed > \$@
3107
3108 # mfef90 preprocessing
3109 # expand statement functions
3110 # expose mfef90 specific substring handling
3111 # add the w2f__types module
3112 ad_input_code_sf.w2f.f$FS90: ad_input_code_sf.f$FS90 mfef90 whirl2f whirl2f_be w2f__types.f90
3113 ./mfef90 -r8 -z -F -N132 \$<
3114 mv \$<.B \$(basename \$<).B
3115 ./whirl2f -openad \$(basename \$<).B
3116 cat w2f__types.f90 \$(basename \$<).w2f.f > \$@
3117
3118 # canonicalizer
3119 ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py
3120 ./preProcess.py --timing --r8 -H -S \$< -o \$@
3121
3122 # F -> WHIRL
3123 # note that the canonicalized version cuts off at col 72
3124 # doing this also for string constants which is ok as long
3125 # as we are in fixed mode and cut of exactly there.
3126 # Otherwise mfef90 patches in spaces to fill up to 72 (or 132)
3127 # characters respectively.
3128 ad_input_code_sf.w2f.pre.B: ad_input_code_sf.w2f.pre.f$FS90 mfef90
3129 ./mfef90 -r8 -z -F \$<
3130 mv \$<.B \$@
3131
3132 # WHIRL -> XAIF
3133 ad_input_code_sf.w2f.pre.xaif : ad_input_code_sf.w2f.pre.B whirl2xaif
3134 ./whirl2xaif -s -n --debug 1 -o \$@ \$<
3135
3136 # XAIF -> XAIF'
3137 ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver
3138 ./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r
3139
3140 # XAIF' -> WHIRL'
3141 ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl
3142 ./xaif2whirl --debug 1 ad_input_code_sf.w2f.pre.B \$<
3143
3144 # WHIRL' -> F'
3145 ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be
3146 ./whirl2f -FLIST:ftn_file=\$@ -openad \$<
3147
3148 # insert template directives
3149 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash
3150 ../OAD_support/insertTemplateDir.bash \$< \$@
3151
3152 PPEXTRAS=\$(wildcard ../OAD_support/ad_template.*.F) ../OAD_support/ad_inline.F
3153 # postprocess F'
3154 postProcess.tag: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 postProcess.py \$(PPEXTRAS:.F=.f)
3155 # the target is a placeholder to signal execution of the rule
3156 touch \$@
3157 # this step also creates the file postProcess.make but we cannot
3158 # name it as the target or else make will try to remake it for
3159 # the include directive above for any rule, e.g. make clean
3160 ./postProcess.py --progress --timing --outputFormat=fixed -m r -i ../OAD_support/ad_inline.f --width 4 \$<
3161
3162 # setup some links
3163 %.xsd:
3164 \$(LN) \${XAIFSCHEMAROOT}/schema/\$@ .
3165
3166 mfef90:
3167 \$(LN) \${OPEN64ROOT}/crayf90/sgi/mfef90 .
3168
3169 # link the support files:
3170 \$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES):
3171 \$(LN) ../OAD_support/\$@ .
3172
3173 whirl2xaif xaif2whirl:
3174 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3175
3176 preProcess.py postProcess.py:
3177 \$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ .
3178
3179 whirl2f whirl2f_be:
3180 \$(LN) \${OPEN64ROOT}/whirl2f/\$@ .
3181
3182 oadDriver:
3183 \$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@
3184
3185 AD_CLEAN += *_mod.h *_mod.F90 *.FF90 *.mod-whirl temp.sed oad_cp.* postProcess.make postProcess.tag postProcess.comp \$(PPEXTRAS:.F=.f)
3186
3187 # ============ end OpenAD specific section ==============
3188
3189 EOF
3190
3191 fi
3192
3193 #=========================================
3194
3195 if test "x$EXEHOOK" != x ; then
3196 printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
3197 fi
3198
3199 echo " Making list of \"exceptions\" that need \".p\" files"
3200 for i in $KPPFILES ; do
3201 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3202 RETVAL=$?
3203 if test "x$RETVAL" != x0 ; then
3204 echo "Error: unable to add file \"$i\" to the exceptions list"
3205 fi
3206 echo "$base.$FS: $base.p" >> $MAKEFILE
3207 done
3208
3209 echo " Making list of NOOPTFILES"
3210 for i in $NOOPTFILES ; do
3211 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3212 RETVAL=$?
3213 if test "x$RETVAL" != x0 ; then
3214 echo "Error: unable to add file \"$i\" to the exceptions list"
3215 fi
3216 echo "$base.o: $base.$FS" >> $MAKEFILE
3217 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
3218 done
3219
3220 echo " Add rules for links"
3221 cat srclinks.tmp >> $MAKEFILE
3222 rm -f srclinks.tmp
3223
3224 echo " Adding makedepend marker"
3225 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
3226
3227 printf "\n=== Done ===\n"
3228
3229 # Create special header files
3230 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
3231 if test ! -f $PACKAGES_DOT_H ; then
3232 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3233 else
3234 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
3235 RETVAL=$?
3236 if test "x$RETVAL" = x0 ; then
3237 rm -f $PACKAGES_DOT_H".tmp"
3238 else
3239 mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
3240 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3241 fi
3242 fi
3243 if test ! -f AD_CONFIG.h ; then
3244 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
3245 fi
3246
3247 # Write the "state" for future records
3248 if test "x$DUMPSTATE" = xt ; then
3249 printf "" > genmake_state
3250 for i in $gm_state ; do
3251 t1="t2=\$$i"
3252 eval $t1
3253 echo "$i='$t2'" >> genmake_state
3254 done
3255 fi

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