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Revision 1.186 - (show annotations) (download)
Sun Mar 29 19:09:24 2009 UTC (10 years, 6 months ago) by jmc
Branch: MAIN
CVS Tags: checkpoint61l
Changes since 1.185: +7 -5 lines
improve previous modif.

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.185 2009/03/27 20:18:07 jmc Exp $
4 #
5 # Makefile generator for MITgcm UV codes
6 # created by cnh 03/98
7 # adapted by aja 06/98
8 # modified by aja 01/00
9 # rewritten in bash by eh3 08/03
10
11 # Search for particular CPP #cmds associated with packages
12 # usage: test_for_package_in_cpp_options CPP_file package_name
13 test_for_package_in_cpp_options() {
14 cpp_options=$1
15 pkg=$2
16 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
17 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
18 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
19 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
20 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
21 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
22 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
23 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
24 }
25
26 # Search for particular CPP #cmds associated with MPI
27 # usage: test_for_mpi_in_cpp_eeoptions CPP_file
28 test_for_mpi_in_cpp_eeoptions() {
29 cpp_options=$1
30 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
31 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
32 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
33 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
34 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
35 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
36 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
37 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
38 }
39
40 # Search for particular string in a file. Return 1 if detected, 0 if not
41 # usage: test_for_string_in_file file string
42 test_for_string_in_file() {
43 file=$1
44 strng=$2
45 grep -i "$strng" $file > /dev/null 2>&1
46 RETVAL=$?
47 if test "x${RETVAL}" = x0 ; then
48 printf "Error: In $file there is an illegal line: "
49 grep -i "$strng" $file
50 exit 99
51 fi
52 return 0
53 }
54
55 # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
56 # the package list.
57 expand_pkg_groups() {
58 new_packages=
59 PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups"
60 if test -r $PKG_GROUPS ; then
61 cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
62 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
63 matched=0
64 for i in $PACKAGES ; do
65 line=`grep "^ *$i" ./p2.tmp`
66 RETVAL=$?
67 if test "x$RETVAL" = x0 ; then
68 matched=1
69 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
70 echo " replacing \"$i\" with: $replace"
71 new_packages="$new_packages $replace"
72 else
73 new_packages="$new_packages $i"
74 fi
75 done
76 PACKAGES=$new_packages
77 rm -f ./p[1,2].tmp
78 return $matched
79 else
80 echo "Warning: can't read package groups definition file: $PKG_GROUPS"
81 fi
82 }
83
84 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
85 # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
86 check_for_broken_Ff() {
87 # Do we have defaults for $FS and/or $FS90 ?
88 tfs=f
89 tfs9=f90
90 if test "x$FS" != x ; then
91 tfs="$FS"
92 fi
93 if test "x$FS90" != x ; then
94 tfs9="$FS90"
95 fi
96
97 # First check the ability to create a *.F/.f pair.
98 cat <<EOF >> genmake_hello.F
99 program hello
100 write(*,*) 'hi'
101 stop
102 end
103 EOF
104 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
105 RETVAL=$?
106 if test "x$RETVAL" != x0 ; then
107 if test "x$FS" = x ; then
108 FS='for'
109 FS90='fr9'
110 check_for_broken_Ff
111 else
112 cat <<EOF 2>&1
113 ERROR: Your file system cannot distinguish between *.F and *.f files
114 (fails the "cp" test) and this program cannot find a suitable
115 replacement extension. Please try a different build environment or
116 contact the <MITgcm-support@mitgcm.org> list for help.
117
118 EOF
119 exit -1
120 fi
121 return
122 fi
123 rm -f genmake_hello.*
124
125 # Check the ability of ${MAKE} and ${LN} to use the current set
126 # of extensions.
127 cat <<EOF >> genmake_hello.F
128 program hello
129 write(*,*) 'hi'
130 stop
131 end
132 EOF
133 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
134 cat <<EOF >> $MAKEFILE
135 .SUFFIXES:
136 .SUFFIXES: .$tfs .F
137 .F.$tfs:
138 $LN \$< \$@
139 EOF
140 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
141 RETVAL=$?
142 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
143 if test "x$FS" = x ; then
144 FS='for'
145 FS90='fr9'
146 check_for_broken_Ff
147 else
148 cat <<EOF 2>&1
149 ERROR: Your file system cannot distinguish between *.F and *.f files
150 (fails the "make/ln" test) and this program cannot find a suitable
151 replacement extension. Please try a different build environment or
152 contact the <MITgcm-support@mitgcm.org> list for help.
153
154 EOF
155 exit -1
156 return
157 fi
158 fi
159 rm -f genmake_hello.* $MAKEFILE
160 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
161
162 # If we make it here, use the extensions
163 FS=$tfs
164 FS90=$tfs9
165 return
166 }
167
168
169 look_for_makedepend() {
170
171 # The "original" makedepend is part of the Imake system that is
172 # most often distributed with XFree86 or with an XFree86 source
173 # package. As a result, many machines (eg. generic Linux) do not
174 # have a system-default "makedepend" available. For those
175 # systems, we have two fall-back options:
176 #
177 # 1) a makedepend implementation shipped with the cyrus-imapd
178 # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
179 #
180 # 2) a known-buggy xmakedpend shell script
181 #
182 # So the choices are, in order:
183 #
184 # 1) use the user-specified program
185 # 2) use a system-wide default
186 # 3) locally build and use the cyrus implementation
187 # 4) fall back to the buggy local xmakedpend script
188 #
189 if test "x${MAKEDEPEND}" = x ; then
190 which makedepend > /dev/null 2>&1
191 RV0=$?
192 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
193 # echo 'MAKEFILE="'$MAKEFILE'"'
194 cat <<EOF >> $MAKEFILE
195 # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
196 #
197 # Some "makedepend" implementations will die if they cannot
198 # find a Makefile -- so this file is here to gives them an
199 # empty one to find and parse.
200 EOF
201 cat <<EOF >> genmake_tc.f
202 program test
203 write(*,*) 'test'
204 stop
205 end
206 EOF
207 makedepend genmake_tc.f > /dev/null 2>&1
208 RV1=$?
209 test -f $MAKEFILE && rm -f $MAKEFILE
210 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
211 if test "x${RV0}${RV1}" = x00 ; then
212 MAKEDEPEND=makedepend
213 else
214 echo " a system-default makedepend was not found."
215
216 # Try to build the cyrus implementation
217 build_cyrus_makedepend
218 RETVAL=$?
219 if test "x$RETVAL" != x0 ; then
220 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
221 fi
222 rm -f ./genmake_cy_md
223 fi
224 else
225 # echo "MAKEDEPEND=${MAKEDEPEND}"
226 echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
227 RETVAL=$?
228 if test x"$RETVAL" = x0 ; then
229 build_cyrus_makedepend
230 fi
231 fi
232 }
233
234
235 build_cyrus_makedepend() {
236 rm -f ./genmake_cy_md
237 (
238 cd $ROOTDIR/tools/cyrus-imapd-makedepend \
239 && ./configure > /dev/null 2>&1 \
240 && make > /dev/null 2>&1
241 if test -x ./makedepend.exe ; then
242 $LN ./makedepend.exe ./makedepend
243 fi
244 ./makedepend ifparser.c > /dev/null 2>&1 \
245 && echo "true"
246 ) > ./genmake_cy_md
247 grep true ./genmake_cy_md > /dev/null 2>&1
248 RETVAL=$?
249 rm -f ./genmake_cy_md
250 if test "x$RETVAL" = x0 ; then
251 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
252 return 0
253 else
254 echo "WARNING: unable to build cyrus-imapd-makedepend"
255 return 1
256 fi
257 }
258
259
260 build_embed_encode()
261 {
262 printf " building the embed-encode utility... "
263 if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
264 if test ! -d "$ROOTDIR/tools/embed_encode" ; then
265 echo
266 echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
267 echo
268 EMBED_SRC=f
269 return 1
270 fi
271 clist="cc gcc c89 $CC"
272 for ic in $clist ; do
273 comm="$ic -o encode_files encode_files.c"
274 ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
275 RETVAL=$?
276 if test "x$RETVAL" = x0 ; then
277 echo "OK"
278 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
279 return 0
280 fi
281 done
282 echo
283 echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
284 echo " so it has been disabled"
285 echo
286 EMBED_SRC=f
287 return 1
288 fi
289 echo "OK"
290 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
291 }
292
293
294 # Guess possible config options for this host
295 find_possible_configs() {
296
297 tmp1=`uname`"_"`uname -m`
298 tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
299 tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
300 tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
301 tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
302 tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
303 PLATFORM=$tmp3
304 echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
305 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
306 echo " The platform appears to be: $PLATFORM"
307
308 echo "test" > test
309 ln -s ./test link
310 RETVAL=$?
311 if test "x${RETVAL}" = x0 ; then
312 LN="ln -s"
313 else
314 echo "Error: \"ln -s\" does not appear to work on this system!"
315 echo " For help, please contact <MITgcm-support@mitgcm.org>."
316 exit 1
317 fi
318 rm -f test link
319
320 if test "x$CPP" = x ; then
321 CPP="cpp -traditional -P"
322 fi
323
324 look_for_makedepend
325
326 #================================================================
327 # look for possible C compilers
328 tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
329 p_CC=
330 for c in $tmp ; do
331 rm -f ./genmake_hello.c ./genmake_hello
332 cat >> genmake_hello.c << EOF
333 #include <stdio.h>
334 int main(int argc, char **argv) {
335 printf("Hello!\n");
336 return 0;
337 }
338 EOF
339 $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
340 RETVAL=$?
341 if test "x${RETVAL}" = x0 ; then
342 p_CC="$p_CC $c"
343 fi
344 done
345 rm -f ./genmake_hello.c ./genmake_hello
346 if test "x${p_CC}" = x ; then
347 cat 1>&2 <<EOF
348
349 Error: No C compilers were found in your path. Please specify one using:
350
351 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
352 2) the CC or MITGCM_CC environment variables.
353
354 EOF
355 exit 1
356 else
357 echo " The possible C compilers found in your path are:"
358 echo " "$p_CC
359 if test "x$CC" = x ; then
360 CC=`echo $p_CC | $AWK '{print $1}'`
361 echo " Setting C compiler to: "$CC
362 fi
363 fi
364
365 #================================================================
366 # look for possible FORTRAN compilers
367 tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 gfortran g95"
368 p_FC=
369 for c in $tmp ; do
370 rm -f ./hello.f ./hello
371 cat >> hello.f <<EOF
372 program hello
373 do i=1,3
374 print *, 'hello world : ', i
375 enddo
376 end
377 EOF
378 $c -o hello hello.f > /dev/null 2>&1
379 RETVAL=$?
380 if test "x${RETVAL}" = x0 ; then
381 p_FC="$p_FC $c"
382 fi
383 done
384 rm -f ./hello.f ./hello
385 if test "x${p_FC}" = x ; then
386 cat 1>&2 <<EOF
387
388 Error: No Fortran compilers were found in your path. Please specify one using:
389
390 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
391 2) a command-line option (eg. "-fc NAME"), or
392 3) the FC or MITGCM_FC environment variables.
393
394 EOF
395 exit 1
396 else
397 echo " The possible FORTRAN compilers found in your path are:"
398 echo " "$p_FC
399 fi
400
401 # Use the first of the compilers found in the current PATH
402 # that has a correctly-named optfile
403 if test "x$OPTFILE" = x -a "x$FC" = x ; then
404 for i in $p_FC ; do
405 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
406 if test -r $OPTFILE ; then
407 echo " Setting OPTFILE to: "$OPTFILE
408 break
409 fi
410 done
411 fi
412
413 if test "x$OPTFILE" = x ; then
414 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
415 if test ! -r $OPTFILE ; then
416 echo " I looked for the file "$OPTFILE" but did not find it"
417 fi
418 fi
419 # echo " The options file: $p_OF"
420 # echo " appears to match so we'll use it."
421 # for i in $p_FC ; do
422 #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
423 #if test -r $p_OF ; then
424 # OPTFILE=$p_OF
425 # echo " The options file: $p_OF"
426 # echo " appears to match so we'll use it."
427 # break
428 #fi
429 # done
430 if test "x$OPTFILE" = x ; then
431 cat 1>&2 <<EOF
432
433 Error: No options file was found in: $ROOTDIR/tools/build_options/
434 that matches this platform ("$PLATFORM") and the compilers found in
435 your path. Please specify an "optfile" using:
436
437 1) the command line (eg. "-optfile=path/to/OPTFILE"), or
438 2) the MITGCM_OF environment variable.
439
440 If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
441
442 EOF
443 exit 1
444 fi
445
446 # # look for possible MPI libraries
447 # mpi_libs=
448 # mpi_fort=`which mpif77 2>/dev/null`
449 # RETVAL=$?
450 # if test "x${RETVAL}" = x0 ; then
451 # cat >>test.f <<EOF
452 # PROGRAM HELLO
453 # DO 10, I=1,10
454 # PRINT *,'Hello World'
455 # 10 CONTINUE
456 # STOP
457 # END
458 # EOF
459 # eval "$mpi_fort -showme test.f > out"
460 # RETVAL=$?
461 # if test "x${RETVAL}" = x0 ; then
462 # a=`cat out`
463 # for i in $a ; do
464 # case $i in
465 # -*)
466 # mpi_libs="$mpi_libs $i" ;;
467 # esac
468 # done
469 # echo "The MPI libs appear to be:"
470 # echo " "$mpi_libs
471 # fi
472 # rm -f test.f out
473 # fi
474
475 }
476
477 # Parse the package dependency information
478 get_pdepend_list() {
479
480 # strip the comments and then convert the dependency file into
481 # two arrays: PNAME, DNAME
482 cat $1 | sed -e 's/#.*$//g' \
483 | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
484 > ./.pd_tmp
485 . ./.pd_tmp
486 rm -f ./.pd_tmp
487
488 printf "PNAME = "${}
489 }
490
491
492 # Explain usage
493 usage() {
494 cat <<EOF
495
496 Usage: "$0" [OPTIONS]
497 where [OPTIONS] can be:
498
499 -help | --help | -h | --h
500 Print this help message and exit.
501
502 -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
503 -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
504 Use "NAME" as the adoptfile. By default, the file at
505 "tools/adjoint_options/adjoint_default" will be used.
506
507 -nooptfile | --nooptfile
508 -optfile NAME | --optfile NAME | -of NAME | --of NAME
509 -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
510 Use "NAME" as the optfile. By default, an attempt will be
511 made to find an appropriate "standard" optfile in the
512 tools/build_options/ directory.
513
514 -pdepend NAME | --pdepend NAME
515 -pdepend=NAME | --pdepend=NAME
516 Get package dependency information from "NAME".
517
518 -pdefault NAME | --pdefault NAME
519 -pdefault=NAME | --pdefault=NAME
520 Get the default package list from "NAME".
521
522 -make NAME | -m NAME
523 --make=NAME | -m=NAME
524 Use "NAME" for the MAKE program. The default is "make" but
525 many platforms, "gmake" is the preferred choice.
526
527 -makefile NAME | -mf NAME
528 --makefile=NAME | -mf=NAME
529 Call the makefile "NAME". The default is "Makefile".
530
531 -makedepend NAME | -md NAME
532 --makedepend=NAME | -md=NAME
533 Use "NAME" for the MAKEDEPEND program.
534
535 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
536 -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
537 Specify the location of the MITgcm ROOTDIR as "NAME".
538 By default, genamke will try to find the location by
539 looking in parent directories (up to the 5th parent).
540
541 -mods NAME | --mods NAME | -mo NAME | --mo NAME
542 -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
543 Here, "NAME" specifies a list of directories that are
544 used for additional source code. Files found in the
545 "mods list" are given preference over files of the same
546 name found elsewhere.
547
548 -disable NAME | --disable NAME
549 -disable=NAME | --disable=NAME
550 Here "NAME" specifies a list of packages that we don't
551 want to use. If this violates package dependencies,
552 genamke will exit with an error message.
553
554 -enable NAME | --enable NAME
555 -enable=NAME | --enable=NAME
556 Here "NAME" specifies a list of packages that we wish
557 to specifically enable. If this violates package
558 dependencies, genamke will exit with an error message.
559
560 -standarddirs NAME | --standarddirs NAME
561 -standarddirs=NAME | --standarddirs=NAME
562 Here, "NAME" specifies a list of directories to be
563 used as the "standard" code.
564
565 -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
566 -fc=NAME | --fc=NAME
567 Use "NAME" as the fortran compiler. By default, genmake
568 will search for a working compiler by trying a list of
569 "usual suspects" such as g77, f77, etc.
570
571 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
572 Use "NAME" as the C compiler. By default, genmake
573 will search for a working compiler by trying a list of
574 "usual suspects" such as gcc, c89, cc, etc.
575
576 -[no]ieee | --[no]ieee
577 Do or don't use IEEE numerics. Note that this option
578 *only* works if it is supported by the OPTFILE that
579 is being used.
580
581 -ignoretime | -ignore_time | --ignoretime | --ignore_time
582 Ignore all the "wall clock" routines entirely. This will
583 not in any way hurt the model results -- it simply means
584 that the code that checks how long the model spends in
585 various routines will give junk values.
586
587 -ts | --ts
588 Produce timing information per timestep
589 -papis | --papis
590 Produce summary MFlop/s (and IPC) with PAPI per timestep
591 -pcls | --pcls
592 Produce summary MFlop/s etc. with PCL per timestep
593 -foolad | --foolad
594 Fool the AD code generator
595 -papi | --papi
596 Performance analysis with PAPI
597 -pcl | --pcl
598 Performance analysis with PCL
599 -hpmt | --hpmt
600 Performance analysis with the HPM Toolkit
601
602 -gsl | --gsl
603 Use GSL to control floating point rounding and precision
604 -devel | --devel
605 Add additional warning and debugging flags for development
606
607 -mpi | --mpi
608 Include MPI header files and link to MPI libraries
609 -mpi=PATH | --mpi=PATH
610 Include MPI header files and link to MPI libraries using MPI_ROOT
611 set to PATH. i.e. Include files from \$PATH/include, link to libraries
612 from \$PATH/lib and use binaries from \$PATH/bin.
613
614 -es | --es | -embed-source | --embed-source
615 Embed a tarball containing the full source code
616 (including the Makefile, etc.) used to build the
617 executable [off by default]
618
619 -bash NAME
620 Explicitly specify the Bourne or BASH shell to use
621
622 While it is most often a single word, the "NAME" variables specified
623 above can in many cases be a space-delimited string such as:
624
625 --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
626 -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
627 -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
628
629 which, depending upon your shell, may need to be single-quoted.
630
631 For more detailed genmake documentation, please see:
632
633 http://mitgcm.org/devel_HOWTO/
634
635 EOF
636
637 exit 1
638 }
639
640 # Build a CPP macro to automate calling C routines from FORTRAN
641 get_fortran_c_namemangling() {
642
643 #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
644 if test ! "x$FC_NAMEMANGLE" = x ; then
645 return 0
646 fi
647
648 default_nm="#define FC_NAMEMANGLE(X) X ## _"
649
650 cat > genmake_test.c <<EOF
651 void tcall( char * string ) { tsub( string ); }
652 EOF
653 $MAKE genmake_test.o >> genmake_warnings 2>&1
654 RETVAL=$?
655 if test "x$RETVAL" != x0 ; then
656 FC_NAMEMANGLE=$default_nm
657 cat <<EOF>> genmake_errors
658
659 WARNING: C test compile fails
660 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
661 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
662 EOF
663 return 1
664 fi
665 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
666 RETVAL=$?
667 if test "x$RETVAL" != x0 ; then
668 FC_NAMEMANGLE=$default_nm
669 cat <<EOF>> genmake_warnings
670
671 WARNING: The "nm" command failed.
672 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
673 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
674 EOF
675 return 1
676 fi
677 cat > genmake_tcomp.$FS <<EOF
678 subroutine tcall( string )
679 character*(*) string
680 call tsub( string )
681 end
682 EOF
683 $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
684 RETVAL=$?
685 if test "x$RETVAL" != x0 ; then
686 FC_NAMEMANGLE=$default_nm
687 cat <<EOF>> genmake_warnings
688
689 WARNING: FORTRAN test compile fails -- please see "genmake_errors"
690 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
691 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
692 EOF
693 return 1
694 fi
695 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
696 RETVAL=$?
697 if test "x$RETVAL" != x0 ; then
698 FC_NAMEMANGLE=$default_nm
699 cat <<EOF>> genmake_warnings
700
701 WARNING: The "nm" command failed.
702 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
703 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
704 EOF
705 return 1
706 fi
707
708 c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
709 f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
710 c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
711 f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
712
713 nmangle="X"
714 if test "x$c_a" != "x$f_a" ; then
715 comm="echo x$f_a | sed -e 's|x$c_a||'"
716 a=`eval $comm`
717 nmangle="$a ## $nmangle"
718 fi
719 if test "x$c_b" != "x$f_b" ; then
720 comm="echo x$f_b | sed -e 's|x$c_b||'"
721 b=`eval $comm`
722 nmangle="$nmangle ## $b"
723 fi
724
725 FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
726
727 # cleanup the testing files
728 rm -f genmake_tcomp.* genmake_test.*
729 }
730
731
732 check_HAVE_CLOC() {
733 get_fortran_c_namemangling
734 cat <<EOF > genmake_tc_1.c
735 $FC_NAMEMANGLE
736 #include <stdio.h>
737 #include <stdlib.h>
738 #include <unistd.h>
739 #include <assert.h>
740 #include <sys/time.h>
741 void FC_NAMEMANGLE(cloc) ( double *curtim )
742 {
743 struct timeval tv1;
744 gettimeofday(&tv1 , (void *)NULL );
745 *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
746 *curtim = *curtim/1.E6;
747 }
748 EOF
749 COMM="$CC $CFLAGS -c genmake_tc_1.c"
750 echo $COMM >> genmake_warnings
751 $COMM >> genmake_warnings 2>&1
752 RET_C=$?
753 cat <<EOF > genmake_tc_2.$FS
754 program hello
755 REAL*8 wtime
756 external cloc
757 call cloc(wtime)
758 print *," HELLO WORLD", wtime
759 end
760 EOF
761 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
762 echo $COMM >> genmake_warnings
763 $COMM >> genmake_warnings 2>&1
764 RET_F=$?
765 test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1
766 RETVAL=$?
767 if test "x$RETVAL" = x0 ; then
768 HAVE_CLOC=t
769 DEFINES="$DEFINES -DHAVE_CLOC"
770 fi
771 rm -f genmake_tc*
772 }
773
774
775 check_HAVE_SIGREG() {
776 if test ! "x$HAVE_SIGREG" = x ; then
777 return
778 fi
779 get_fortran_c_namemangling
780 cat <<EOF > genmake_tc_1.c
781 $FC_NAMEMANGLE
782 #include <stdlib.h>
783 #include <stdio.h>
784 #include <signal.h>
785 #include <errno.h>
786 #include <ucontext.h>
787
788 int * ip;
789
790 static void killhandler(
791 unsigned int sn, siginfo_t si, struct ucontext *sc )
792 {
793 *ip = *ip + 1;
794 return;
795 }
796
797 void FC_NAMEMANGLE(sigreg) (int * aip)
798 {
799 struct sigaction s;
800 ip = aip;
801 s.sa_flags = SA_SIGINFO;
802 s.sa_sigaction = (void *)killhandler;
803 if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
804 printf("Sigaction returned error = %d\n", errno);
805 exit(0);
806 }
807 return;
808 }
809 EOF
810 COMM="$CC $CFLAGS -c genmake_tc_1.c"
811 echo $COMM >> genmake_warnings
812 $COMM >> genmake_warnings 2>&1
813 RET_C=$?
814 cat <<EOF > genmake_tc_2.$FS
815 program hello
816 integer anint
817 common /iv/ anint
818 external sigreg
819 call sigreg(anint)
820 end
821 EOF
822 echo >> genmake_warnings
823 echo "running: check_HAVE_SIGREG()" >> genmake_warnings
824 cat genmake_tc_2.$FS >> genmake_warnings
825 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
826 echo $COMM >> genmake_warnings
827 $COMM >> genmake_warnings 2>&1
828 RETVAL=$?
829 if test "x$RETVAL" = x0 ; then
830 HAVE_SIGREG=t
831 DEFINES="$DEFINES -DHAVE_SIGREG"
832 fi
833 rm -f genmake_tc*
834 }
835
836
837 check_HAVE_SETRLSTK() {
838 if test "x$HAVE_SETRLSTK" = xt ; then
839 DEFINES="$DEFINES -DHAVE_SETRLSTK"
840 return
841 fi
842 if test ! "x$HAVE_SETRLSTK" = x ; then
843 return
844 fi
845 get_fortran_c_namemangling
846 cat <<EOF > genmake_tc_1.c
847 $FC_NAMEMANGLE
848 #include <sys/time.h>
849 #include <sys/resource.h>
850 #include <unistd.h>
851 void FC_NAMEMANGLE(setrlstk) ()
852 {
853 struct rlimit rls;
854 rls.rlim_cur = RLIM_INFINITY;
855 rls.rlim_max = RLIM_INFINITY;
856 setrlimit(RLIMIT_STACK, &rls);
857 return;
858 }
859 EOF
860 COMM="$CC $CFLAGS -c genmake_tc_1.c"
861 echo $COMM >> genmake_warnings
862 $COMM >> genmake_warnings 2>&1
863 RET_C=$?
864 cat <<EOF > genmake_tc_2.$FS
865 program hello
866 external setrlstk
867 call setrlstk()
868 end
869 EOF
870 echo >> genmake_warnings
871 echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
872 cat genmake_tc_2.$FS >> genmake_warnings
873 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
874 echo $COMM >> genmake_warnings
875 $COMM >> genmake_warnings 2>&1
876 RETVAL=$?
877 if test "x$RETVAL" = x0 ; then
878 HAVE_SETRLSTK=t
879 DEFINES="$DEFINES -DHAVE_SETRLSTK"
880 fi
881 rm -f genmake_tc*
882 }
883
884
885 check_HAVE_STAT() {
886 get_fortran_c_namemangling
887 cat <<EOF > genmake_tc_1.c
888 $FC_NAMEMANGLE
889 #include <stdio.h>
890 #include <stdlib.h>
891 #include <unistd.h>
892 #include <sys/stat.h>
893 #include <sys/types.h>
894 void FC_NAMEMANGLE(tfsize) ( int *nbyte )
895 {
896 char name[512];
897 struct stat astat;
898
899 name[0] = 'a'; name[1] = '\0';
900 if (! stat(name, &astat))
901 *nbyte = (int)(astat.st_size);
902 else
903 *nbyte = -1;
904 }
905 EOF
906 COMM="$CC $CFLAGS -c genmake_tc_1.c"
907 echo $COMM >> genmake_warnings
908 $COMM >> genmake_tc.log 2>&1
909 RET_C=$?
910 cat <<EOF > genmake_tc_2.$FS
911 program hello
912 integer nbyte
913 call tfsize(nbyte)
914 print *," HELLO WORLD", nbyte
915 end
916 EOF
917 echo >> genmake_warnings
918 echo "running: check_HAVE_STAT()" >> genmake_warnings
919 cat genmake_tc_2.$FS >> genmake_warnings
920 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
921 echo $COMM >> genmake_warnings
922 $COMM >> genmake_tc.log 2>&1
923 RETVAL=$?
924 if test "x$RETVAL" = x0 ; then
925 HAVE_STAT=t
926 DEFINES="$DEFINES -DHAVE_STAT"
927 fi
928 rm -f genmake_tc*
929 }
930
931
932 check_netcdf_libs() {
933 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
934 return
935 fi
936 echo >> genmake_warnings
937 echo "running: check_netcdf_libs()" >> genmake_warnings
938 cat <<EOF > genmake_tnc.F
939 program fgennc
940 #include "netcdf.inc"
941 EOF
942 if test ! "x$MPI" = x ; then
943 echo '#include "mpif.h"' >> genmake_tnc.F
944 fi
945 cat <<EOF >> genmake_tnc.F
946 integer iret, ncid, xid
947 iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
948 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
949 iret = nf_def_dim(ncid, 'X', 11, xid)
950 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
951 iret = nf_close(ncid)
952 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
953 end
954 EOF
955 echo "=== genmake_tnc.F ===" > genmake_tnc.log
956 cat genmake_tnc.F >> genmake_tnc.log
957 echo "=== genmake_tnc.F ===" >> genmake_tnc.log
958 RET_CPP=f
959 COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
960 echo "$COMM" >> genmake_tnc.log
961 eval $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
962 if test "x$RET_CPP" = xf ; then
963 echo " WARNING: CPP failed to pre-process the netcdf test." \
964 >> genmake_tnc.log
965 echo " Please check that \$INCLUDES is properly set." \
966 >> genmake_tnc.log
967 fi
968 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
969 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
970 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
971 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
972 RET_COMPILE=$?
973 cat genmake_tnc.log >> genmake_warnings
974
975 #EH3 Remove test program execution for machines that either disallow
976 #EH3 execution or cannot support it (eg. cross-compilers)
977 #EH3
978 #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
979 #EH3 RETVAL=$?
980 #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
981
982 if test "x$RET_COMPILE" = x0 ; then
983 HAVE_NETCDF=t
984 else
985 # try again with "-lnetcdf" added to the libs
986 echo "try again with added '-lnetcdf'" > genmake_tnc.log
987 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
988 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
989 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
990 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
991 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
992 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
993 RET_COMPILE=$?
994 cat genmake_tnc.log >> genmake_warnings
995 if test "x$RET_COMPILE" = x0 ; then
996 LIBS="$LIBS -lnetcdf"
997 HAVE_NETCDF=t
998 else
999 # try again with "-lnetcdff" added to the libs
1000 echo "try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
1001 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1002 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1003 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1004 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1005 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1006 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
1007 RET_COMPILE=$?
1008 cat genmake_tnc.log >> genmake_warnings
1009 if test "x$RET_COMPILE" = x0 ; then
1010 LIBS="$LIBS -lnetcdff -lnetcdf"
1011 HAVE_NETCDF=t
1012 fi
1013 fi
1014 fi
1015 rm -f genmake_tnc*
1016 }
1017
1018
1019
1020 ###############################################################################
1021 # Sequential part of script starts here
1022 ###############################################################################
1023
1024 # Set defaults here
1025 COMMANDL="$0 $@"
1026
1027 PLATFORM=
1028 LN=
1029 S64=
1030 KPP=
1031 #FC=
1032 #CC=gcc
1033 #CPP=
1034 LINK=
1035 DEFINES=
1036 PACKAGES=
1037 ENABLE=
1038 DISABLE=
1039 # MAKEFILE=
1040 # MAKEDEPEND=
1041 PDEPEND=
1042 DUMPSTATE=t
1043 PDEFAULT=
1044 OPTFILE=
1045 INCLUDES="-I. $INCLUDES"
1046 FFLAGS=
1047 FOPTIM=
1048 FEXTRAFLAGS=
1049 USE_EXTENDED_SRC=
1050 EXTENDED_SRC_FLAG=
1051 CFLAGS=
1052 KFLAGS1=
1053 KFLAGS2=
1054 #LDADD=
1055 LIBS=
1056 KPPFILES=
1057 NOOPTFILES=
1058 NOOPTFLAGS=
1059 MPI=
1060 MPIPATH=
1061 TS=
1062 PAPIS=
1063 PCLS=
1064 FOOLAD=
1065 PAPI=
1066 PCL=
1067 HPMT=
1068 GSL=
1069 DEVEL=
1070 HAVE_TEST_L=
1071
1072 # DEFINES checked by test compilation or command-line
1073 HAVE_SYSTEM=
1074 HAVE_FDATE=
1075 FC_NAMEMANGLE=
1076 HAVE_CLOC=
1077 # HAVE_SETRLSTK=
1078 HAVE_STAT=
1079 HAVE_NETCDF=
1080 HAVE_ETIME=
1081 IGNORE_TIME=
1082
1083 MODS=
1084 TOOLSDIR=
1085 SOURCEDIRS=
1086 INCLUDEDIRS=
1087 STANDARDDIRS="USE_THE_DEFAULT"
1088
1089 G2ARGS=
1090 BASH=
1091 PWD=`pwd`
1092 test "x$MAKE" = x && MAKE=make
1093 test "x$AWK" = x && AWK=awk
1094 EMBED_SRC=
1095 THISHOST=`hostname`
1096 THISCWD=`pwd`
1097 THISDATE=`date`
1098 THISUSER=`echo $USER`
1099 THISVER=
1100 MACHINE=`uname -a`
1101 EXECUTABLE=
1102 EXEHOOK=
1103 EXEDIR=
1104 PACKAGES_CONF=
1105 IEEE=
1106 if test "x$MITGCM_IEEE" != x ; then
1107 IEEE=$MITGCM_IEEE
1108 fi
1109 FS=
1110 FS90=
1111
1112 AUTODIFF_PKG_USED=f
1113 AD_OPTFILE=
1114 TAF=
1115 AD_TAF_FLAGS=
1116 FTL_TAF_FLAGS=
1117 SVD_TAF_FLAGS=
1118 TAF_EXTRA=
1119 TAMC=
1120 AD_TAMC_FLAGS=
1121 FTL_TAF_FLAGS=
1122 SVD_TAMC_FLAGS=
1123 TAMC_EXTRA=
1124
1125
1126 # The following state can be set directly by command-line switches
1127 gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1128 gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS"
1129
1130 # The following state is not directly set by command-line switches
1131 gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS"
1132 gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1133 gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1134 gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1135 gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1136
1137 # The following are all related to adjoint/tangent-linear stuff
1138 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1139 gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1140 gm_s12="TAF_EXTRA TAMC_EXTRA"
1141
1142 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
1143 gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1144
1145 cat <<EOF
1146
1147 GENMAKE :
1148
1149 A program for GENerating MAKEfiles for the MITgcm project. For a
1150 quick list of options, use "genmake -h" or for more detail see:
1151
1152 http://mitgcm.org/devel_HOWTO/
1153
1154 EOF
1155
1156 echo "=== Processing options files and arguments ==="
1157 gm_local="genmake_local"
1158 printf " getting local config information: "
1159 if test -f $gm_local ; then
1160 echo "using $gm_local"
1161 . $gm_local
1162 # echo "DISABLE=$DISABLE"
1163 # echo "ENABLE=$ENABLE"
1164 else
1165 echo "none found"
1166 fi
1167
1168 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1169 #OPTIONS=
1170 #n=0
1171 #for i ; do
1172 # echo "$i $n"
1173 # setvar="OPTIONS[$n]='$i'"
1174 # # echo " $setvar"
1175 # eval "$setvar"
1176 # n=$(( $n + 1 ))
1177 #done
1178 #parse_options
1179 ac_prev=
1180 for ac_option in "$@" ; do
1181
1182 G2ARGS="$G2ARGS \"$ac_option\""
1183
1184 # If the previous option needs an argument, assign it.
1185 if test -n "$ac_prev"; then
1186 eval "$ac_prev=\$ac_option"
1187 ac_prev=
1188 continue
1189 fi
1190
1191 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1192
1193 case $ac_option in
1194
1195 -help | --help | -h | --h)
1196 usage ;;
1197
1198 -nooptfile | --nooptfile)
1199 OPTFILE="NONE" ;;
1200 -optfile | --optfile | -of | --of)
1201 ac_prev=OPTFILE ;;
1202 -optfile=* | --optfile=* | -of=* | --of=*)
1203 OPTFILE=$ac_optarg ;;
1204
1205 -adoptfile | --adoptfile | -adof | --adof)
1206 ac_prev=AD_OPTFILE ;;
1207 -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1208 AD_OPTFILE=$ac_optarg ;;
1209
1210 -pdepend | --pdepend)
1211 ac_prev=PDEPEND ;;
1212 -pdepend=* | --pdepend=*)
1213 PDEPEND=$ac_optarg ;;
1214
1215 -pdefault | --pdefault)
1216 ac_prev=PDEFAULT ;;
1217 -pdefault=* | --pdefault=*)
1218 PDEFAULT=$ac_optarg ;;
1219
1220 -make | --make | -m | --m)
1221 ac_prev=MAKE ;;
1222 -make=* | --make=* | -m=* | --m=*)
1223 MAKE=$ac_optarg ;;
1224
1225 -bash | --bash)
1226 ac_prev=BASH ;;
1227 -bash=* | --bash=*)
1228 BASH=$ac_optarg ;;
1229
1230 -makedepend | --makedepend | -md | --md)
1231 ac_prev=MAKEDEPEND ;;
1232 -makedepend=* | --makedepend=* | -md=* | --md=*)
1233 MAKEDEPEND=$ac_optarg ;;
1234
1235 -makefile | --makefile | -ma | --ma)
1236 ac_prev=MAKEFILE ;;
1237 -makefile=* | --makefile=* | -ma=* | --ma=*)
1238 MAKEFILE=$ac_optarg ;;
1239
1240 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1241 echo "ERROR: The platform option has been removed. Please specify"
1242 echo " the build options using the \"optfile\" mechanism."
1243 echo
1244 usage
1245 ;;
1246
1247 -rootdir | --rootdir | -rd | --rd)
1248 ac_prev=ROOTDIR ;;
1249 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1250 ROOTDIR=$ac_optarg ;;
1251
1252 -mods | --mods | -mo | --mo)
1253 ac_prev=MODS ;;
1254 -mods=* | --mods=* | -mo=* | --mo=*)
1255 MODS=$ac_optarg ;;
1256
1257 -disable | --disable)
1258 ac_prev=DISABLE ;;
1259 -disable=* | --disable=*)
1260 DISABLE=$ac_optarg ;;
1261
1262 -enable | --enable)
1263 ac_prev=ENABLE ;;
1264 -enable=* | --enable=*)
1265 ENABLE=$ac_optarg ;;
1266
1267 -standarddirs | --standarddirs)
1268 ac_prev=STANDARDDIRS ;;
1269 -standarddirs=* | --standarddirs=*)
1270 STANDARDDIRS=$ac_optarg ;;
1271
1272 # -cpp | --cpp)
1273 # ac_prev=cpp ;;
1274 # -cpp=* | --cpp=*)
1275 # CPP=$ac_optarg ;;
1276
1277 -cc | --cc)
1278 ac_prev=CC ;;
1279 -cc=* | --cc=*)
1280 CC=$ac_optarg ;;
1281
1282 -fortran | --fortran | -fc | --fc)
1283 ac_prev=FC ;;
1284 -fc=* | --fc=*)
1285 FC=$ac_optarg ;;
1286
1287 -fs | --fs)
1288 ac_prev=FS ;;
1289 -fs=* | --fs=*)
1290 FS=$ac_optarg ;;
1291
1292 -fs90 | --fs90)
1293 ac_prev=FS90 ;;
1294 -fs90=* | --fs90=*)
1295 FS90=$ac_optarg ;;
1296
1297 -ieee | --ieee)
1298 IEEE=true ;;
1299 -noieee | --noieee)
1300 IEEE= ;;
1301
1302 -ts | --ts)
1303 TS=true ;;
1304 -papis | --papis)
1305 PAPIS=true ;;
1306 -pcls | --pcls)
1307 PCLS=true ;;
1308 -foolad | --foolad)
1309 FOOLAD=true ;;
1310 -papi | --papi)
1311 PAPI=true ;;
1312 -pcl | --pcl)
1313 PCL=true ;;
1314 -hpmt | --hpmt)
1315 HPMT=true ;;
1316
1317 -gsl | --gsl)
1318 GSL=true ;;
1319
1320 -devel | --devel)
1321 DEVEL=true ;;
1322
1323 -mpi | --mpi)
1324 MPI=true ;;
1325 -mpi=* | --mpi=*)
1326 MPIPATH=$ac_optarg
1327 MPI=true ;;
1328
1329 # -jam | --jam)
1330 # JAM=1 ;;
1331 # -nojam | --nojam)
1332 # JAM=0 ;;
1333
1334 -ds | --ds)
1335 DUMPSTATE=t ;;
1336
1337 -taf_extra | --taf_extra)
1338 ac_prev=TAF_EXTRA ;;
1339 -taf_extra=* | --taf_extra=*)
1340 TAF_EXTRA=$ac_optarg ;;
1341
1342 -tamc_extra | --tamc_extra)
1343 ac_prev=TAMC_EXTRA ;;
1344 -tamc_extra=* | --tamc_extra=*)
1345 TAMC_EXTRA=$ac_optarg ;;
1346
1347 -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1348 IGNORE_TIME="-DIGNORE_TIME" ;;
1349
1350 -es | --es | -embed-source | --embed-source)
1351 EMBED_SRC=t ;;
1352
1353 -*)
1354 echo "Error: unrecognized option: "$ac_option
1355 usage
1356 ;;
1357
1358 *)
1359 echo "Error: unrecognized argument: "$ac_option
1360 usage
1361 ;;
1362
1363 esac
1364
1365 done
1366
1367
1368 if test -f ./.genmakerc ; then
1369 echo
1370 echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1371 echo " file. This file format is no longer supported. For directions on"
1372 echo " how to setup and use the new \"genmake2\" script, please see:"
1373 echo " http://mitgcm.org/devel_HOWTO/"
1374 echo " and send an email to MITgcm-support@mitgcm.org if you need help."
1375 echo "WARNING: ignore \"./.genmakerc\" and continue."
1376 echo
1377 fi
1378
1379 # Find the MITgcm ${ROOTDIR}
1380 if test "x${ROOTDIR}" = x ; then
1381 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1382 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1383 ROOTDIR=".."
1384 else
1385 for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1386 if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1387 ROOTDIR=$d
1388 printf "Warning: ROOTDIR was not specified but there appears to be"
1389 echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1390 break
1391 fi
1392 done
1393 fi
1394 fi
1395 if test "x${ROOTDIR}" = x ; then
1396 echo "Error: Cannot determine ROOTDIR for MITgcm code."
1397 echo " Please specify a ROOTDIR using either an options "
1398 echo " file or a command-line option."
1399 exit 1
1400 fi
1401 if test ! -d ${ROOTDIR} ; then
1402 echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1403 exit 1
1404 fi
1405
1406 # Find the MITgcm ${THISVER}
1407 version_file="${ROOTDIR}/doc/tag-index"
1408 if test -f $version_file ; then
1409 THISVER=`grep '^checkpoint' $version_file | head -1`
1410 #- remove ./BUILD_INFO.h file if older than version_file
1411 if test -f ./BUILD_INFO.h -a ./BUILD_INFO.h -ot $version_file ; then
1412 echo " remove ./BUILD_INFO.h (older than ${version_file})"
1413 rm -f ./BUILD_INFO.h
1414 fi
1415 fi
1416
1417 if test "x$MAKEFILE" = x ; then
1418 MAKEFILE="Makefile"
1419 fi
1420
1421 echo " getting OPTFILE information: "
1422 if test "x${OPTFILE}" = x ; then
1423 if test "x$MITGCM_OF" = x ; then
1424 echo "Warning: no OPTFILE specified so we'll look for possible settings"
1425 printf "\n=== Searching for possible settings for OPTFILE ===\n"
1426 find_possible_configs
1427 else
1428 OPTFILE=$MITGCM_OF
1429 fi
1430 fi
1431 if test "x$OPTFILE" != xNONE ; then
1432 if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1433 echo " using OPTFILE=\"$OPTFILE\""
1434 . "$OPTFILE"
1435 RETVAL=$?
1436 if test "x$RETVAL" != x0 ; then
1437 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1438 echo "--please check that variable syntax is bash-compatible"
1439 exit 1
1440 fi
1441 if test "x$DUMPSTATE" != xf ; then
1442 cp -f $OPTFILE "genmake_optfile"
1443 fi
1444 else
1445 echo "Error: can't read OPTFILE=\"$OPTFILE\""
1446 exit 1
1447 fi
1448 fi
1449
1450 echo " getting AD_OPTFILE information: "
1451 if test "x${AD_OPTFILE}" = x ; then
1452 if test "x$MITGCM_AD_OF" = x ; then
1453 AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1454 else
1455 AD_OPTFILE=$MITGCM_AD_OF
1456 fi
1457 fi
1458 if test "x${AD_OPTFILE}" != xNONE ; then
1459 if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1460 echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1461 . "$AD_OPTFILE"
1462 RETVAL=$?
1463 if test "x$RETVAL" != x0 ; then
1464 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1465 echo "--please check that variable syntax is bash-compatible"
1466 exit 1
1467 fi
1468 if test "x$DUMPSTATE" != xf ; then
1469 cp -f $AD_OPTFILE "genmake_ad_optfile"
1470 fi
1471 else
1472 echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1473 exit 1
1474 fi
1475 fi
1476
1477 #====================================================================
1478 # Set default values if not set by the optfile
1479 #
1480 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1481 # either set defaults or complain and abort!
1482 if test ! "x$BASH" = x ; then
1483 # add a trailing space so that it works within the Makefile syntax (see below)
1484 BASH="$BASH "
1485 fi
1486 if test "x$FC" = x ; then
1487 cat <<EOF 1>&2
1488
1489 Error: no Fortran compiler: please specify using one of the following:
1490 1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1491 2) the "-fc=XXX" command-line option
1492 3) the "./genmake_local" file
1493 EOF
1494 exit 1
1495 fi
1496 if test "x$CC" = x ; then
1497 CC=cc
1498 # cat <<EOF 1>&2
1499 # Error: no C compiler: please specify using one of the following:
1500 # 1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1501 # 2) the "-cc=XXX" command-line option
1502 # 3) the "./genmake_local" file
1503 # EOF
1504 # exit 1
1505 fi
1506 if test "x$LINK" = x ; then
1507 LINK=$FC
1508 fi
1509 if test "x$MAKE" = x ; then
1510 MAKE="make"
1511 fi
1512 if test "x$CPP" = x ; then
1513 CPP=cpp
1514 fi
1515 #EH3 === UGLY ===
1516 # The following is an ugly little hack to check for $CPP in /lib/ and
1517 # it should eventually be replaced with a more general function that
1518 # searches a combo of the user's path and a list of "usual suspects"
1519 # to find the correct location for binaries such as $CPP.
1520 for i in " " "/lib/" ; do
1521 echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1522 done
1523 #EH3 === UGLY ===
1524 echo "#define A a" | $CPP > test_cpp 2>&1
1525 RETVAL=$?
1526 if test "x$RETVAL" != x0 ; then
1527 cat <<EOF 1>&2
1528
1529 Error: C pre-processor "$CPP" failed the test case: please specify using:
1530
1531 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1532 2) the "./genmake_local" file
1533 3) with the CPP environment variable
1534
1535 EOF
1536 exit 1
1537 else
1538 rm -f test_cpp
1539 fi
1540 look_for_makedepend
1541 if test "x$LN" = x ; then
1542 LN="ln -s"
1543 fi
1544 echo "test" > genmake_test_ln
1545 $LN genmake_test_ln genmake_tlink
1546 RETVAL=$?
1547 if test "x$RETVAL" != x0 ; then
1548 cat <<EOF 1>&2
1549
1550 Error: The command "ln -s" failed -- please specify a working soft-link
1551 command in the optfile.
1552
1553 EOF
1554 exit 1
1555 fi
1556 test -L genmake_tlink > /dev/null 2>&1
1557 RETVAL=$?
1558 if test "x$RETVAL" = x0 ; then
1559 HAVE_TEST_L=t
1560 fi
1561 rm -f genmake_test_ln genmake_tlink
1562
1563 # Check for broken *.F/*.f handling and fix if possible
1564 check_for_broken_Ff
1565
1566 if test ! "x$MPI" = x ; then
1567 echo " Turning on MPI cpp macros"
1568 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1569 fi
1570
1571 if test ! "x$TS" = x ; then
1572 echo " Turning on timing per timestep"
1573 if test ! "x$FOOLAD" = x ; then
1574 DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1575 else
1576 DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1577 fi
1578 PACKAGES="$PACKAGES showflops"
1579 fi
1580 if test ! "x$PAPIS" = x ; then
1581 echo " Turning on PAPI flop summary per timestep"
1582 echo " Please make sure PAPIINC, PAPILIB are defined"
1583 if test ! "x$FOOLAD" = x ; then
1584 DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1585 else
1586 DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1587 fi
1588 INCLUDES="$INCLUDES $PAPIINC"
1589 LIBS="$LIBS $PAPILIB"
1590 PACKAGES="$PACKAGES showflops"
1591 fi
1592 if test ! "x$PCLS" = x ; then
1593 echo " Turning on PCL counter summary per timestep"
1594 echo " Please make sure PCLINC, PCLLIB are defined"
1595 if test ! "x$FOOLAD" = x ; then
1596 DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1597 else
1598 DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1599 fi
1600 INCLUDES="$INCLUDES $PCLINC"
1601 LIBS="$LIBS $PCLLIB"
1602 PACKAGES="$PACKAGES showflops"
1603 fi
1604 if test ! "x$PAPI" = x ; then
1605 if test ! "x$PAPIS" = x ; then
1606 echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1607 echo " Sticking with PAPI flop summary per timestep!"
1608 else
1609 echo " Turning on performance analysis with PAPI"
1610 echo " Please make sure PAPIINC, PAPILIB are defined"
1611 DEFINES="$DEFINES -DUSE_PAPI"
1612 INCLUDES="$INCLUDES $PAPIINC"
1613 LIBS="$LIBS $PAPILIB"
1614 fi
1615 fi
1616 if test ! "x$PCL" = x ; then
1617 if test ! "x$PCLS" = x ; then
1618 echo " PCL performance analysis and flop summary per timestep cannot co-exist!"
1619 echo " Sticking with PCL flop summary per timestep!"
1620 else
1621 echo " Turning on performance analysis with PCL"
1622 echo " Please make sure PCLINC, PCLLIB are defined"
1623 DEFINES="$DEFINES -DUSE_PCL"
1624 INCLUDES="$INCLUDES $PCLINC"
1625 LIBS="$LIBS $PCLLIB"
1626 fi
1627 fi
1628 if test ! "x$HPMT" = x ; then
1629 if test ! "x$PAPI" = x ; then
1630 echo " PAPI and the HPM Toolkit cannot co-exist!"
1631 echo " Sticking with PAPI!"
1632 else if test ! "x$PCL" = x ; then
1633 echo " PCL and the HPM Toolkit cannot co-exist!"
1634 echo " Sticking with PCL!"
1635 else
1636 echo " Turning on performance analysis with the HPM Toolkit"
1637 echo " Please make sure HPMTINC, HPMTLIB are defined"
1638 DEFINES="$DEFINES -DUSE_LIBHPM"
1639 INCLUDES="$INCLUDES $HPMTINC"
1640 LIBS="$LIBS $HPMTLIB"
1641 fi
1642 fi
1643 fi
1644 if test ! "x$GSL" = x ; then
1645 echo " Turning on use of GSL to control floating point calculations"
1646 echo " Please make sure GSLINC, GSLLIB are defined"
1647 DEFINES="$DEFINES -DUSE_GSL_IEEE"
1648 INCLUDES="$INCLUDES $GSLINC"
1649 LIBS="$LIBS $GSLLIB"
1650 fi
1651 #- if USE_EXTENDED_SRC is set, add EXTENDED_SRC_FLAG to FFLAGS :
1652 if test ! "x$USE_EXTENDED_SRC" = x ; then
1653 FFLAGS="$FFLAGS $EXTENDED_SRC_FLAG"
1654 F90FIXEDFORMAT="$F90FIXEDFORMAT $EXTENDED_SRC_FLAG"
1655 fi
1656
1657 printf "\n=== Checking system libraries ===\n"
1658 printf " Do we have the system() command using $FC... "
1659 cat > genmake_tcomp.$FS <<EOF
1660 program hello
1661 call system('echo hi')
1662 end
1663 EOF
1664 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1665 RETVAL=$?
1666 if test "x$RETVAL" = x0 ; then
1667 HAVE_SYSTEM=t
1668 DEFINES="$DEFINES -DHAVE_SYSTEM"
1669 echo "yes"
1670 else
1671 HAVE_SYSTEM=
1672 echo "no"
1673 fi
1674 rm -f genmake_tcomp*
1675
1676 printf " Do we have the fdate() command using $FC... "
1677 cat > genmake_tcomp.$FS <<EOF
1678 program hello
1679 CHARACTER*(128) string
1680 string = ' '
1681 call fdate( string )
1682 print *, string
1683 end
1684 EOF
1685 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1686 RETVAL=$?
1687 if test "x$RETVAL" = x0 ; then
1688 HAVE_FDATE=t
1689 DEFINES="$DEFINES -DHAVE_FDATE"
1690 echo "yes"
1691 else
1692 HAVE_FDATE=
1693 echo "no"
1694 fi
1695 rm -f genmake_tcomp*
1696
1697 printf " Do we have the etime() command using $FC... "
1698 cat > genmake_tcomp.$FS <<EOF
1699 program hello
1700 REAL*4 ACTUAL, TARRAY(2)
1701 EXTERNAL ETIME
1702 REAL*4 ETIME
1703 actual = etime( tarray )
1704 print *, tarray
1705 end
1706 EOF
1707 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1708 RETVAL=$?
1709 if test "x$RETVAL" = x0 ; then
1710 HAVE_ETIME=t
1711 DEFINES="$DEFINES -DHAVE_ETIME"
1712 echo "yes"
1713 else
1714 HAVE_ETIME=
1715 echo "no"
1716 fi
1717 rm -f genmake_tcomp*
1718
1719 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1720 check_HAVE_CLOC
1721 if test "x$HAVE_CLOC" != x ; then
1722 echo "yes"
1723 else
1724 echo "no"
1725 if test "x$EMBED_SRC" = xt ; then
1726 echo " WARNING: you requested file embedding but it has"
1727 echo " been disabled since C code cannot be called"
1728 EMBED_SRC=
1729 fi
1730 fi
1731 rm -f genmake_t*
1732
1733 printf " Can we unlimit the stack size using $FC... "
1734 check_HAVE_SETRLSTK
1735 if test "x$HAVE_SETRLSTK" = xt ; then
1736 echo "yes"
1737 else
1738 echo "no"
1739 fi
1740 rm -f genmake_t*
1741
1742 printf " Can we register a signal handler using $FC... "
1743 check_HAVE_SIGREG
1744 if test "x$HAVE_SIGREG" = xt ; then
1745 echo "yes"
1746 else
1747 echo "no"
1748 fi
1749 rm -f genmake_t*
1750
1751 printf " Can we use stat() through C calls... "
1752 check_HAVE_STAT
1753 if test "x$HAVE_STAT" != x ; then
1754 echo "yes"
1755 else
1756 echo "no"
1757 fi
1758 rm -f genmake_t*
1759
1760 printf " Can we create NetCDF-enabled binaries... "
1761 check_netcdf_libs
1762 if test "x$HAVE_NETCDF" != x ; then
1763 echo "yes"
1764 else
1765 echo "no"
1766 fi
1767 DEFINES="$DEFINES $IGNORE_TIME"
1768
1769 if test "x$EMBED_SRC" = xt ; then
1770 build_embed_encode
1771 fi
1772 if test "x$EMBED_SRC" = xt ; then
1773 ENABLE="$ENABLE embed_files"
1774 fi
1775
1776
1777 printf "\n=== Setting defaults ===\n"
1778 printf " Adding MODS directories: "
1779 MPI_LNKF=
1780 for d in $MODS ; do
1781 if test ! -d $d ; then
1782 echo
1783 echo "Error: MODS directory \"$d\" not found!"
1784 exit 1
1785 else
1786 printf "$d "
1787 SOURCEDIRS="$SOURCEDIRS $d"
1788 INCLUDEDIRS="$INCLUDEDIRS $d"
1789 #-------------------------------------------------------
1790 # Put special links so that MPI specific files are used
1791 MPI_FILES=`(cd $d ; find . -name "*_mpi" -print)`
1792 for i in $MPI_FILES ; do
1793 ii=`echo $i | sed 's:^\./::'`
1794 name=`echo $ii | sed 's:_mpi::' `
1795 if test "x$MPI" = x ; then
1796 # NO: We undo an _mpi symbolically linked file
1797 if test -L $name ; then
1798 cmp $name "$d/$ii" > /dev/null 2>&1
1799 RETVAL=$?
1800 if test "x$RETVAL" = x0 ; then
1801 printf "Un-linking $name ; "
1802 rm -f $name
1803 fi
1804 fi
1805 else
1806 # YES: We symbolically link this file (with conditions if already there)
1807 if test -L $name ; then
1808 cmp $d/$ii $name > /dev/null 2>&1
1809 RETVAL=$?
1810 yy=0 ;
1811 for xx in $MPI_LNKF ; do if test $xx = $name ; then yy=1 ; fi ; done
1812 if test "x$RETVAL" != x0 -a $yy = 0 ; then
1813 # remove sym-link if different and has not just been linked
1814 printf "Un-link + "
1815 rm -f $name
1816 fi
1817 if test "x$RETVAL" = x0 ; then
1818 # if identical, keep sym-link and keep record of it
1819 MPI_LNKF="$MPI_LNKF $name"
1820 fi
1821 fi
1822 if ! test -f $name ; then
1823 # make sym-link and keep record of it
1824 printf "Linking $ii to $name ; "
1825 ln -sf $d/$ii $name
1826 MPI_LNKF="$MPI_LNKF $name"
1827 fi
1828 fi
1829 done
1830 #-------------------------------------------------------
1831 fi
1832 done
1833 echo
1834 #echo "MPI_LNKF='$MPI_LNKF'"
1835
1836 if test "x${PLATFORM}" = x ; then
1837 PLATFORM=$p_PLATFORM
1838 fi
1839
1840 if test "x${EXEDIR}" = x ; then
1841 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1842 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1843 EXEDIR=../exe
1844 else
1845 EXEDIR=.
1846 fi
1847 fi
1848 if test ! -d ${EXEDIR} ; then
1849 echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1850 exit 1
1851 fi
1852
1853 if test "x${TOOLSDIR}" = x ; then
1854 TOOLSDIR="$ROOTDIR/tools"
1855 fi
1856 if test ! -d ${TOOLSDIR} ; then
1857 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1858 exit 1
1859 fi
1860 if test "x$S64" = x ; then
1861 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1862 RETVAL=$?
1863 if test "x${RETVAL}" = x0 ; then
1864 S64='$(TOOLSDIR)/set64bitConst.sh'
1865 else
1866 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1867 RETVAL=$?
1868 if test "x${RETVAL}" = x0 ; then
1869 S64='$(TOOLSDIR)/set64bitConst.csh'
1870 else
1871 cat <<EOF
1872
1873 ERROR: neither of the two default scripts:
1874
1875 ${TOOLSDIR}/set64bitConst.sh
1876 ${TOOLSDIR}/set64bitConst.csh
1877
1878 are working so please check paths or specify (with \$S64) a
1879 working version of this script.
1880
1881 EOF
1882 exit 1
1883 fi
1884 fi
1885 fi
1886 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1887
1888 EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1889
1890 # We have a special set of source files in eesupp/src which are
1891 # generated from some template source files. We'll make them first so
1892 # they appear as regular source code
1893 if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1894 echo " Making source files in eesupp from templates"
1895 ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
1896 RETVAL=$?
1897 if test "x${RETVAL}" = x0 ; then
1898 rm -f make_eesupp.errors
1899 else
1900 echo "Error: problem encountered while building source files in eesupp:"
1901 cat make_eesupp.errors 1>&2
1902 exit 1
1903 fi
1904 fi
1905
1906 #same for pkg/exch2 and pkg/regrid
1907 for pdir in exch2 regrid ; do
1908 if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1909 echo " Making source files in pkg/${pdir} from templates"
1910 ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1
1911 RETVAL=$?
1912 if test "x${RETVAL}" = x0 ; then
1913 rm -f make_${pdir}.errors
1914 else
1915 echo "Error: problem encountered while building source files in pkg/${pdir}:"
1916 cat make_${pdir}.errors 1>&2
1917 exit 1
1918 fi
1919 fi
1920 done
1921
1922 printf "\n=== Determining package settings ===\n"
1923 if test "x${PDEPEND}" = x ; then
1924 tmp=$ROOTDIR"/pkg/pkg_depend"
1925 if test -r $tmp ; then
1926 PDEPEND=$tmp
1927 else
1928 echo "Warning: No package dependency information was specified."
1929 echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1930 fi
1931 else
1932 if test ! -r ${PDEPEND} ; then
1933 echo "Error: can't read package dependency info from PDEPEND=\"$PDEPEND\""
1934 exit 1
1935 fi
1936 fi
1937 echo " getting package dependency info from $PDEPEND"
1938 # Strip the comments and then convert the dependency file into
1939 # two arrays: PNAME, DNAME
1940 cat $PDEPEND | sed -e 's/#.*$//g' \
1941 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
1942 > ./.pd_tmp
1943 RETVAL=$?
1944 if test ! "x${RETVAL}" = x0 ; then
1945 echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
1946 exit 1
1947 fi
1948 . ./.pd_tmp
1949 rm -f ./.pd_tmp
1950
1951 # Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups"
1952 # file should eventually be added so that, for convenience, one can
1953 # specify groups of packages using names like "ocean" and "atmosphere".
1954 echo " checking default package list: "
1955 if test "x${PDEFAULT}" = x ; then
1956 for i in "." $MODS ; do
1957 if test -r $i"/packages.conf" ; then
1958 PDEFAULT=$i"/packages.conf"
1959 break
1960 fi
1961 done
1962 fi
1963 if test "x${PDEFAULT}" = x ; then
1964 PDEFAULT="$ROOTDIR/pkg/pkg_default"
1965 fi
1966 if test "x${PDEFAULT}" = xNONE ; then
1967 echo " default packages file disabled"
1968 else
1969 if test ! -r $PDEFAULT ; then
1970 echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\""
1971 else
1972 echo " using PDEFAULT=\"$PDEFAULT\""
1973 # Strip the comments and add all the names
1974 def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1975 RETVAL=$?
1976 if test "x${RETVAL}" != x0 ; then
1977 printf "Error: can't parse default package list "
1978 echo "-- please check PDEFAULT=\"$PDEFAULT\""
1979 exit 1
1980 fi
1981 for i in $def ; do
1982 PACKAGES="$PACKAGES $i"
1983 done
1984 echo " before group expansion packages are: $PACKAGES"
1985 RET=1
1986 while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1987 echo " after group expansion packages are: $PACKAGES"
1988 fi
1989 fi
1990
1991 echo " applying DISABLE settings"
1992 for i in $PACKAGES ; do
1993 echo $i >> ./.tmp_pack
1994 done
1995 for i in `grep "-" ./.tmp_pack` ; do
1996 j=`echo $i | sed 's/[-]//'`
1997 DISABLE="$DISABLE $j"
1998 done
1999 pack=
2000 for p in $PACKAGES ; do
2001 addit="t"
2002 for d in $DISABLE ; do
2003 if test "x$p" = "x$d" ; then
2004 addit="f"
2005 fi
2006 done
2007 if test "x$addit" = xt ; then
2008 pack="$pack $p"
2009 fi
2010 done
2011 PACKAGES="$pack"
2012 echo " applying ENABLE settings"
2013 echo "" > ./.tmp_pack
2014 PACKAGES="$PACKAGES $ENABLE"
2015 # Test if each explicitly referenced package exists
2016 for i in $PACKAGES ; do
2017 j=`echo $i | sed 's/[-+]//'`
2018 if test ! -d "$ROOTDIR/pkg/$j" ; then
2019 echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
2020 exit 1
2021 fi
2022 echo $i >> ./.tmp_pack
2023 done
2024 PACKAGES=
2025 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
2026 PACKAGES="$PACKAGES $i"
2027 done
2028 rm -f ./.tmp_pack
2029 echo " packages are: $PACKAGES"
2030
2031 # Check for package MNC: if NetCDF is available, then build the MNC
2032 # template files ; otherwise, delete mnc from the list of packages.
2033 echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
2034 RETVAL=$?
2035 if test "x$RETVAL" = x0 ; then
2036 if test "x$HAVE_NETCDF" != xt ; then
2037 cat <<EOF
2038
2039 *********************************************************************
2040 WARNING: the "mnc" package was enabled but tests failed to compile
2041 NetCDF applications. Please check that:
2042
2043 1) NetCDF is correctly installed for this compiler and
2044 2) the LIBS variable (within the "optfile") specifies the correct
2045 NetCDF library to link against.
2046
2047 Due to this failure, the "mnc" package is now DISABLED.
2048 *********************************************************************
2049
2050 EOF
2051 PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
2052 DISABLE="$DISABLE mnc"
2053 else
2054 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
2055 RETVAL=$?
2056 if test "x${RETVAL}" = x0 ; then
2057 rm -f make_mnc.errors
2058 else
2059 echo "Error: problem encountered while building source files in pkg/mnc:"
2060 cat make_mnc.errors 1>&2
2061 exit 1
2062 fi
2063 fi
2064 fi
2065
2066 # Check for package PROFILES: if NetCDF is not available,
2067 # then delete profiles from the list of available packages.
2068 echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1
2069 RETVAL=$?
2070 if test "x$RETVAL" = x0 ; then
2071 if test "x$HAVE_NETCDF" != xt ; then
2072 cat <<EOF
2073
2074 *********************************************************************
2075 WARNING: the "profiles" package was enabled but tests failed to
2076 compile NetCDF applications. Please check that:
2077
2078 1) NetCDF is correctly installed for this compiler and
2079 2) the LIBS variable (within the "optfile") specifies the correct
2080 NetCDF library to link against.
2081
2082 Due to this failure, the "profiles" package is now DISABLED.
2083 *********************************************************************
2084
2085 EOF
2086 PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2087 DISABLE="$DISABLE profiles"
2088 fi
2089 fi
2090
2091 echo " applying package dependency rules"
2092 ck=
2093 while test "x$ck" != xtt ; do
2094 i=0
2095 # rtot=${#PNAME[@]}
2096 rtot=$nname
2097 while test $i -le $rtot ; do
2098
2099 # Is $pname in the current $PACKAGES list?
2100 # pname=${PNAME[$i]}
2101 tmp="pname=\"\$PNAME_$i\""
2102 eval $tmp
2103 pin="f"
2104 for p in $PACKAGES ; do
2105 if test "x$p" = "x$pname" ; then
2106 pin="t"
2107 fi
2108 done
2109
2110 # Is the DNAME entry a (+) or (-) rule ?
2111 tmp="dname=\"\$DNAME_$i\""
2112 eval $tmp
2113 plus="-"
2114 echo $dname | grep '^+' > /dev/null 2>&1
2115 RETVAL=$?
2116 if test "x$RETVAL" = x0 ; then
2117 plus="+"
2118 fi
2119
2120 # Is $dname in the current $PACKAGES list?
2121 dname=`echo $dname | sed -e 's/^[+-]//'`
2122 din="f"
2123 for p in $PACKAGES ; do
2124 if test "x$p" = "x$dname" ; then
2125 din="t"
2126 fi
2127 done
2128
2129 # Do we need to add $dname according to the dependency rules?
2130 if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2131 #echo " " $pname ": need to add :" $dname
2132 in_dis="f"
2133 for dis in $DISABLE ; do
2134 if test "x$dis" = "x$dname" ; then
2135 in_dis="t"
2136 fi
2137 done
2138 if test "x$in_dis" = xt ; then
2139 echo "Error: can't satisfy package dependencies:"
2140 echo " \"$dname\" is required by the dependency rules"
2141 echo " but is disallowed by the DISABLE settings"
2142 exit 1
2143 else
2144 PACKAGES="$PACKAGES $dname"
2145 ck=
2146 fi
2147 fi
2148
2149 # Do we need to get rid of $dname according to the dependency rules?
2150 if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
2151 echo "Error: can't satisfy package dependencies:"
2152 echo " \"$pname\" was requested but is disallowed by"
2153 echo " the dependency rules for \"$dname\""
2154 exit 1
2155 fi
2156 i=`echo "$i + 1" | bc -l`
2157 #i=$(( $i + 1 ))
2158 done
2159 ck=$ck"t"
2160 done
2161 echo " packages are: $PACKAGES"
2162 for i in $PACKAGES ; do
2163 adr="$ROOTDIR/pkg/$i"
2164 if test -d $adr ; then
2165 SOURCEDIRS="$SOURCEDIRS $adr"
2166 INCLUDEDIRS="$INCLUDEDIRS $adr"
2167 if test "x$i" = xautodiff ; then
2168 AUTODIFF_PKG_USED=t
2169 fi
2170 else
2171 echo "Error: the directory \"$adr\" for package $i doesn't exist"
2172 exit 1
2173 fi
2174 done
2175
2176 # Create a list of #define and #undef to enable/disable packages
2177 PACKAGES_DOT_H=PACKAGES_CONFIG.h
2178 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2179 # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2180 # file would eventually be split up so that all package-related #define
2181 # statements could be separated and handled only by genmake.
2182 names=`ls -1 "$ROOTDIR/pkg"`
2183 all_pack=
2184 DISABLED_PACKAGES=
2185 for n in $names ; do
2186 if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2187 has_pack="f"
2188 for pack in $PACKAGES ; do
2189 if test "x$pack" = "x$n" ; then
2190 has_pack="t"
2191 break
2192 fi
2193 done
2194 if test "x$has_pack" = xf ; then
2195 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2196 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2197 fi
2198 fi
2199 done
2200 ENABLED_PACKAGES=
2201 for i in $PACKAGES ; do
2202 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2203 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2204 #eh3 DEFINES="$DEFINES -D$def"
2205
2206 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2207 case $i in
2208 aim_v23)
2209 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2210 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2211 ;;
2212 esac
2213 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2214
2215 done
2216
2217 echo " Adding STANDARDDIRS"
2218 BUILDDIR=${BUILDDIR:-.}
2219 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
2220 STANDARDDIRS="eesupp model"
2221 fi
2222 if test "x$STANDARDDIRS" != x ; then
2223 for d in $STANDARDDIRS ; do
2224 adr="$ROOTDIR/$d/src"
2225 if test ! -d $adr ; then
2226 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2227 echo " is correct and that you correctly specified the STANDARDDIRS option"
2228 exit 1
2229 else
2230 SOURCEDIRS="$SOURCEDIRS $adr"
2231 fi
2232 adr="$ROOTDIR/$d/inc"
2233 if test ! -d $adr ; then
2234 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2235 echo " is correct and that you correctly specified the STANDARDDIRS option"
2236 exit 1
2237 else
2238 INCLUDEDIRS="$INCLUDEDIRS $adr"
2239 fi
2240 done
2241 fi
2242
2243 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2244 echo " of \"#define \"-type statements that are no longer allowed:"
2245 CPP_OPTIONS=
2246 CPP_EEOPTIONS=
2247 spaths=". $INCLUDEDIRS"
2248 names=`ls -1 "$ROOTDIR/pkg"`
2249 for i in $spaths ; do
2250 try="$i/CPP_OPTIONS.h"
2251 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2252 echo " found CPP_OPTIONS=\"$try\""
2253 CPP_OPTIONS="$try"
2254 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2255 for n in $names ; do
2256 test_for_package_in_cpp_options $CPP_OPTIONS $n
2257 done
2258 fi
2259 try="$i/CPP_EEOPTIONS.h"
2260 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2261 echo " found CPP_EEOPTIONS=\"$try\""
2262 # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2263 #**** not yet enabled ****
2264 # test_for_mpi_in_cpp_eeoptions $try
2265 #**** not yet enabled ****
2266 CPP_EEOPTIONS="$try"
2267 fi
2268 done
2269 if test "x$CPP_OPTIONS" = x ; then
2270 echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2271 exit 1
2272 fi
2273
2274 # Here, we build the list of files to be "run through" the adjoint
2275 # compiler.
2276 if test -f ./adSrcFiles.tmp ; then
2277 rm -f ./adSrcFiles.tmp
2278 fi
2279 echo " Creating the list of files for the adjoint compiler."
2280 for i in $SOURCEDIRS ; do
2281 list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2282 for j in $list_files ; do
2283 cat $i/$j >> adSrcFiles.tmp
2284 done
2285 done
2286 if test ! "x"$FS = "x.f" ; then
2287 cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f
2288 mv -f adSrcFiles.tmp_f adSrcFiles.tmp
2289 fi
2290
2291 echo
2292 echo "=== Creating the Makefile ==="
2293 echo " setting INCLUDES"
2294 for i in $INCLUDEDIRS ; do
2295 if test ! -d $i ; then
2296 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2297 fi
2298 done
2299
2300 if test ! "x$DIVA" = x ; then
2301 echo " Creating the pseudo-MPI include directory"
2302 INCLUDES="-I./mpi_headers $INCLUDES"
2303 rm -rf ./mpi_headers
2304 mkdir -p ./mpi_headers
2305
2306 if test "x$MPIINCLUDEDIR" = x ; then
2307 if test "x$MPIHOME" = x ; then
2308 MPIHOME='/usr'
2309 fi
2310 MPIINCLUDEDIR='$MPIHOME/include'
2311 fi
2312
2313 if test -r $MPIINCLUDEDIR/mpif.h ; then
2314 for i in $MPI_HEADER_FILES; do
2315 cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2316 done
2317
2318 perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2319 else
2320 echo " We cannot create a copy of mpif.h!"
2321 # exit -1
2322 fi
2323 fi
2324
2325 echo " Determining the list of source and include files"
2326 rm -rf .links.tmp
2327 mkdir .links.tmp
2328 touch .links.tmp/foo
2329 if test ! -r ".links.tmp/foo" ; then
2330 echo
2331 echo "ERROR : something is wrong with your directory permissions or"
2332 echo " your user file-creation mask (\"umask\") since creating a"
2333 echo " sub-dir, touch-ing a file within it, and then reading it is"
2334 echo " not working. Please try setting your umask to something"
2335 echo " sane such as:"
2336 echo
2337 echo " umask 0002"
2338 echo
2339 echo " and please verify that you have the proper permissions for"
2340 echo " creating sub-directories and then reading files created"
2341 echo " within them."
2342 echo
2343 exit 1
2344 fi
2345 rm -f .links.tmp/foo
2346
2347 if test "x$OPENAD" != x ; then
2348 OAD_DONT_COMPILE="/dev/null"
2349 OAD_DONT_TRANSFORM="/dev/null"
2350 OAD_KEEP_ORIGINAL="/dev/null"
2351 OAD_CB2M_FILES="/dev/null"
2352 echo " looking for dontCompile file: "
2353 for i in "." $MODS ; do
2354 if test -r $i"/dontCompile" ; then
2355 OAD_DONT_COMPILE=$i"/dontCompile"
2356 echo " found $OAD_DONT_COMPILE"
2357 break
2358 fi
2359 done
2360 echo " looking for dontTransform file: "
2361 for i in "." $MODS ; do
2362 if test -r $i"/dontTransform" ; then
2363 OAD_DONT_TRANSFORM=$i"/dontTransform"
2364 echo " found $OAD_DONT_TRANSFORM"
2365 break
2366 fi
2367 done
2368 echo " looking for keepOriginal file: "
2369 for i in "." $MODS ; do
2370 if test -r $i"/keepOriginal" ; then
2371 OAD_KEEP_ORIGINAL=$i"/keepOriginal"
2372 echo " found $OAD_KEEP_ORIGINAL"
2373 break
2374 fi
2375 done
2376 echo " looking for cb2mFiles: "
2377 for i in "." $MODS ; do
2378 if test -r $i"/cb2mFiles" ; then
2379 OAD_CB2M_FILES=$i"/cb2mFiles"
2380 echo " found $OAD_CB2M_FILES"
2381 break
2382 fi
2383 done
2384 echo " OpenAD exceptions: "
2385 fi
2386
2387 echo "# This section creates symbolic links" > srclinks.tmp
2388 echo "" >> srclinks.tmp
2389 printf 'F77_SRC_FILES = ' > F77srclist.tmp
2390 printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp
2391 printf 'C_SRC_FILES = ' > csrclist.tmp
2392 printf 'F90_SRC_FILES = ' > F90srclist.tmp
2393 printf 'H_SRC_FILES = ' > hsrclist.tmp
2394 printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp
2395 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2396 for d in $alldirs ; do
2397 deplist=
2398 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2399 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2400 if test "x$OPENAD" != x ; then
2401 sfiles=`( echo $sfiles | grep -v _cb2m\. )`
2402 fi
2403 for sf in $sfiles ; do
2404 if test ! -r ".links.tmp/$sf" ; then
2405 if test -f "$d/$sf" ; then
2406 ignore_f=f
2407 case $d/$sf in
2408 ./$PACKAGES_DOT_H)
2409 ignore_f=t
2410 ;;
2411 ./AD_CONFIG.h)
2412 ignore_f=t
2413 ;;
2414 ./FC_NAMEMANGLE.h)
2415 ignore_f=t
2416 ;;
2417 ./BUILD_INFO.h)
2418 ignore_f=t
2419 ;;
2420 ./EMBEDDED_FILES.h)
2421 ignore_f=t
2422 ;;
2423 *)
2424 # For the local directory *ONLY*,
2425 # ignore all soft-links
2426 if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2427 ignore_f=t
2428 else
2429 touch .links.tmp/$sf
2430 deplist="$deplist $sf"
2431 fi
2432 ;;
2433 esac
2434 if test "x$ignore_f" = xf ; then
2435 extn=`echo $sf | $AWK -F. '{print $NF}'`
2436 case $extn in
2437 F)
2438 echo " \\" >> F77srclist.tmp
2439 printf " $sf" >> F77srclist.tmp
2440 if test "x$OPENAD" != x ; then
2441 basename=${sf%%.F}
2442 isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp`
2443 if test -z "$isAD" ; then
2444 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}`
2445 if test -z "$toBeIgnored" ; then
2446 echo " \\" >> nonADF77srclist.tmp
2447 printf " $sf" >> nonADF77srclist.tmp
2448 else
2449 echo " not to be compiled : $sf"
2450 fi
2451 else # file is initially listed as an AD file we want to exclude it
2452 # or we want to retain the untransformed version
2453 notToBeTransformed=`egrep ^$basename'[ ]*' ${OAD_DONT_TRANSFORM}`
2454 untransformedVersionToBeKept=`egrep ^$basename'[ ]*' ${OAD_KEEP_ORIGINAL}`
2455 if test -n "$notToBeTransformed"; then
2456 echo " not to be transformed: $sf"
2457 fi
2458 if test -n "$untransformedVersionToBeKept" ; then
2459 echo " original to be kept : $sf"
2460 fi
2461 if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then
2462 echo " \\" >> nonADF77srclist.tmp
2463 printf " $sf" >> nonADF77srclist.tmp
2464 fi
2465 fi
2466 fi
2467 ;;
2468 F90)
2469 echo " \\" >> F90srclist.tmp
2470 printf " $sf" >> F90srclist.tmp
2471 ;;
2472 c)
2473 echo " \\" >> csrclist.tmp
2474 printf " $sf" >> csrclist.tmp
2475 ;;
2476 h)
2477 echo " \\" >> hsrclist.tmp
2478 printf " $sf" >> hsrclist.tmp
2479 ;;
2480 flow)
2481 echo " \\" >> ad_flow_files.tmp
2482 printf " $sf" >> ad_flow_files.tmp
2483 ;;
2484 esac
2485 fi
2486 fi
2487 fi
2488 done
2489 if test "x$deplist" != x ; then
2490 if test "$d" != "." ; then
2491 echo "" >> srclinks.tmp
2492 echo "# These files are linked from $d" >> srclinks.tmp
2493 echo "$deplist :" >> srclinks.tmp
2494 # We need to make sure that the link isn't already there.
2495 # This may happen when make thinks that a header file has to be "remade"
2496 # because a module it depends on has changed. In this case we do nothing.
2497 printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp
2498 fi
2499 fi
2500 done
2501 rm -rf .links.tmp
2502 echo "" >> F77srclist.tmp
2503 echo "" >> nonADF77srclist.tmp
2504 echo "" >> csrclist.tmp
2505 echo "" >> F90srclist.tmp
2506 echo "" >> hsrclist.tmp
2507 echo "" >> ad_flow_files.tmp
2508
2509 if test -f $MAKEFILE ; then
2510 mv -f $MAKEFILE "$MAKEFILE.bak"
2511 fi
2512 echo " Writing makefile: $MAKEFILE"
2513 echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2514 echo "# $MACHINE" >> $MAKEFILE
2515 echo "# This makefile was generated automatically on" >> $MAKEFILE
2516 echo "# $THISDATE" >> $MAKEFILE
2517 echo "# by the command:" >> $MAKEFILE
2518 echo "# $0 $G2ARGS" >> $MAKEFILE
2519 echo "# executed by:" >> $MAKEFILE
2520 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2521
2522 EXE_AD=$EXECUTABLE"_ad"
2523 EXE_FTL=$EXECUTABLE"_ftl"
2524 EXE_SVD=$EXECUTABLE"_svd"
2525
2526 cat >>$MAKEFILE <<EOF
2527 #
2528 # OPTFILE="$OPTFILE"
2529 #
2530 # BUILDDIR : Directory where object files are written
2531 # SOURCEDIRS : Directories containing the source (.F) files
2532 # INCLUDEDIRS : Directories containing the header-source (.h) files
2533 # EXEDIR : Directory where executable that is generated is written
2534 # EXECUTABLE : Full path of executable binary
2535 #
2536 # CPP : C-preprocessor command
2537 # INCLUDES : Directories searched for header files
2538 # DEFINES : Macro definitions for CPP
2539 # MAKEDEPEND : Dependency generator
2540 # KPP : Special preprocessor command (specific to platform)
2541 # KFLAGS : Flags for KPP
2542 # FC : Fortran compiler command
2543 # FFLAGS : Configuration/debugging options for FC
2544 # FOPTIM : Optimization options for FC
2545 # LINK : Command for link editor program
2546 # LIBS : Library flags /or/ additional optimization/debugging flags
2547
2548 ROOTDIR = ${ROOTDIR}
2549 BUILDDIR = ${BUILDDIR}
2550 SOURCEDIRS = ${SOURCEDIRS}
2551 INCLUDEDIRS = ${INCLUDEDIRS}
2552 EXEDIR = ${EXEDIR}
2553 EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2554 TOOLSDIR = ${TOOLSDIR}
2555
2556 #eh3 new defines for the adjoint work
2557 AUTODIFF = ${ROOTDIR}/pkg/autodiff
2558 EXE_AD = ${EXE_AD}
2559 EXE_FTL = ${EXE_FTL}
2560 EXE_SVD = ${EXE_SVD}
2561
2562 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2563 DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2564
2565 # These files are created by Makefile
2566 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2567 EOF
2568
2569 if test "x$EMBED_SRC" = xt ; then
2570 echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2571 else
2572 echo "EMBEDDED_FILES = " >>$MAKEFILE
2573 fi
2574
2575 # Note: figure out some way to add Hyades JAM libraries here
2576 cat >>$MAKEFILE <<EOF
2577 # Unix ln (link)
2578 LN = ${LN}
2579 # C preprocessor
2580 CPP = cat \$< | ${S64} | ${CPP}
2581 # Dependency generator
2582 MAKEDEPEND = ${MAKEDEPEND}
2583 # Special preprocessor (KAP on DECs, FPP on Crays)
2584 KPP = ${KPP}
2585 # Fortran compiler
2586 FC = ${FC}
2587 # Fortran compiler
2588 F90C = ${F90C}
2589 # C compiler
2590 CC = ${CC}
2591 # Link editor
2592 LINK = ${LINK} ${LDADD}
2593
2594 # Defines for CPP
2595 DEFINES = ${DEFINES}
2596 # Includes for CPP
2597 INCLUDES = ${INCLUDES}
2598 # Flags for KPP
2599 KFLAGS1 = ${KFLAGS1}
2600 KFLAGS2 = ${KFLAGS2}
2601 # Optim./debug for FC
2602 FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2603 FOPTIM = ${FOPTIM}
2604 # Optim./debug for FC
2605 F90FLAGS = ${F90FLAGS}
2606 F90OPTIM = ${F90OPTIM}
2607 F90FIXEDFORMAT = ${F90FIXEDFORMAT}
2608 # Flags for CC
2609 CFLAGS = ${CFLAGS}
2610 # Files that should not be optimized
2611 NOOPTFILES = ${NOOPTFILES}
2612 NOOPTFLAGS = ${NOOPTFLAGS}
2613 # Flags and libraries needed for linking
2614 LIBS = ${LIBS}
2615 # Name of the Mekfile
2616 MAKEFILE=${MAKEFILE}
2617
2618 EOF
2619
2620 cat F77srclist.tmp >> $MAKEFILE
2621 cat nonADF77srclist.tmp >> $MAKEFILE
2622 cat csrclist.tmp >> $MAKEFILE
2623 cat F90srclist.tmp >> $MAKEFILE
2624 cat hsrclist.tmp >> $MAKEFILE
2625 cat ad_flow_files.tmp >> $MAKEFILE
2626
2627 rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp
2628
2629 echo >> $MAKEFILE
2630
2631 # add definitions for preprocessed sources
2632 # and note that not all systems allow case sensitive extensions
2633 # hence the $FS and $FS90 here.
2634 # for fixed format f90 files we use ff90 or FF90 resp
2635 # but these are not expected to be the original source files
2636
2637 echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')' >> $MAKEFILE
2638 echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE
2639 echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE
2640 echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE
2641 echo >> $MAKEFILE
2642 echo '.SUFFIXES:' >> $MAKEFILE
2643 echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE
2644
2645 cat >>$MAKEFILE <<EOF
2646
2647 all: \$(EXECUTABLE)
2648 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2649 @echo Creating \$@ ...
2650 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2651 depend:
2652 @make links
2653 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2654 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2655 -rm -f makedepend.out
2656
2657 lib: libmitgcmuv.a
2658
2659 libmitgcmuv.a: \$(OBJFILES)
2660 ar rcv libmitgcmuv.a \$(OBJFILES)
2661 ar d libmitgcmuv.a main.o
2662
2663 links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES)
2664
2665 small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
2666
2667 output.txt: \$(EXECUTABLE)
2668 @printf 'running ... '
2669 @\$(EXECUTABLE) > \$@
2670
2671 clean:
2672 -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2673 -rm -rf *.o
2674 -rm -rf *.$FS *.flowdir
2675 -rm -rf *.f$FS90 *_mod.h *_mod.F90 *.FF90 *.mod-whirl ad_input*
2676 -rm -rf temp.sed
2677 Clean:
2678 @make clean
2679 @make cleanlinks
2680 -rm -f \$(SPECIAL_FILES)
2681 -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log f90mkdepend.log *.bak
2682 -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2683 CLEAN:
2684 @make Clean
2685 -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2686 -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2687 -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2688 -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
2689 -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2690 -rm -rf mnc_test_*
2691
2692 #eh3 Makefile: makefile
2693 makefile:
2694 $THIS_SCRIPT $G2ARGS
2695 cleanlinks:
2696 -find . -type l -exec rm {} \;
2697
2698 # Special targets (SPECIAL_FILES) which are created by make
2699 ${PACKAGES_DOT_H}:
2700 @echo Creating \$@ ...
2701 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2702 AD_CONFIG.h:
2703 @echo Creating \$@ ...
2704 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2705 FC_NAMEMANGLE.h:
2706 @echo Creating \$@ ...
2707 echo "$FC_NAMEMANGLE" > \$@
2708
2709 BUILD_INFO.h:
2710 @echo Creating \$@ ...
2711 EOF
2712
2713 test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2714 test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2715 test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2716 test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2717
2718 if test "x$EMBED_SRC" = xt ; then
2719 cat >>$MAKEFILE <<EOF
2720
2721 decode_files.o : EMBEDDED_FILES.h
2722
2723 ## \$(F77_PP_SRC_FILES)
2724 all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2725 @echo Creating \$@ ...
2726 -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2727 -rm -f all_fF.tar.gz
2728 -gzip all_fF.tar
2729
2730 EMBEDDED_FILES.h : all_fF.tar.gz
2731 @echo Creating \$@ ...
2732 -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2733
2734 EOF
2735 fi
2736
2737 cat >>$MAKEFILE <<EOF
2738
2739 # The normal chain of rules is ( .F - .$FS - .o )
2740
2741 ## This nullifies any default implicit rules concerning these two file types:
2742 ## %.o : %.F
2743
2744 .F.$FS:
2745 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2746 .$FS.o:
2747 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2748 .F90.$FS90:
2749 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2750 .FF90.f$FS90:
2751 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2752 .$FS90.o:
2753 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2754 .f$FS90.o:
2755 cp \$< \$(basename \$<).f90
2756 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$(basename \$<).f90
2757 .c.o:
2758 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2759 .flow.flowdir:
2760 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2761
2762 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2763 .F.p:
2764 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2765 .p.$FS:
2766 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2767
2768 EOF
2769
2770 #=========================================
2771 #=== Automatic Differentiation Rules ===
2772 #=== for TAMC/TAF ======================
2773
2774 if test "x$OPENAD" = x ; then
2775
2776 cat >>$MAKEFILE <<EOF
2777
2778 TAMC = ${TAMC}
2779 TAF = ${TAF}
2780
2781 TAF_EXTRA = ${TAF_EXTRA}
2782 TAMC_EXTRA = ${TAMC_EXTRA}
2783
2784 EOF
2785
2786 ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2787 ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2788 ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2789 for i in $ad_vars ; do
2790 name=$i
2791 t1="t2=\$"`echo "$i"`
2792 eval $t1
2793 printf "%-20s = " $name >> $MAKEFILE
2794 echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2795 done
2796
2797 echo " Add the source list for AD code generation"
2798 echo >> $MAKEFILE
2799 printf "AD_FILES = " >> $MAKEFILE
2800 AD_FILES=`cat adSrcFiles.tmp`
2801 for i in $AD_FILES ; do
2802 echo " \\" >> $MAKEFILE
2803 printf " $i" >> $MAKEFILE
2804 done
2805 echo >> $MAKEFILE
2806 rm -f adSrcFiles.tmp
2807
2808 cat >>$MAKEFILE <<EOF
2809
2810 # ... AD ...
2811 adall: \$(EXE_AD)
2812 adtaf: ad_taf_output.$FS
2813 adtamc: ad_tamc_output.$FS
2814
2815 ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2816 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2817 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2818 -rm -f ad_config.template
2819 @make \$(F77_PP_SRC_FILES)
2820 @make \$(FLOFILES)
2821 cat \$(FLOFILES) \$(AD_FILES) > ad_input_code.$FS
2822
2823 ad_taf_output.$FS: ad_input_code.$FS
2824 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2825 ls -l ad_input_code_ad.$FS
2826 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2827
2828 adtafonly:
2829 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2830 ls -l ad_input_code_ad.$FS
2831 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2832
2833 \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2834 \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2835
2836 ad_tamc_output.$FS: ad_input_code.$FS
2837 \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2838 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2839
2840 ad_tamc: ad_tamc_output.o \$(OBJFILES)
2841 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2842
2843 adonlyfwd:
2844 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2845
2846 adtrick:
2847 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2848
2849 # ... FTL ...
2850 ftlall: ftl_taf
2851 ftltaf: ftl_taf_output.$FS
2852 ftltamc: ftl_tamc_output.$FS
2853
2854 ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2855 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2856 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2857 -rm -f ftl_config.template
2858 @make \$(F77_PP_SRC_FILES)
2859 @make \$(AD_FLOW_FILES)
2860 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2861
2862 ftl_taf_output.$FS: ftl_input_code.$FS
2863 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2864 ls -l ftl_input_code_ftl.$FS
2865 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2866
2867 ftltafonly:
2868 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2869 ls -l ftl_input_code_ftl.$FS
2870 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2871
2872 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2873 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2874
2875 ftl_tamc_output.$FS: ftl_input_code.$FS
2876 \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2877 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2878
2879 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2880 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2881
2882
2883 # ... SVD ...
2884 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2885 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2886 @echo "--->>> Do make svdall afterwards to compile. <<<---"
2887 svdall: svd_touch svd_taf
2888
2889 svd_taf: \$(OBJFILES)
2890 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2891
2892 @echo "--->>> Only COMPILE svd code! <<<---"
2893 @echo "--->>> Assumes you previously <<<---"
2894 @echo "--->>> did make svdtaf <<<---"
2895
2896 svd_touch:
2897 @echo "--->>> Only COMPILE svd code! <<<---"
2898 @echo "--->>> Assumes you previously <<<---"
2899 @echo "--->>> did make svdtaf <<<---"
2900 touch ad_taf_output.$FS ftl_taf_output.$FS
2901 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2902 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2903 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2904 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2905 -rm -f ftl_config.template
2906
2907 EOF
2908
2909 fi
2910
2911 #=== for OpenAD ========================
2912
2913 if test "x$OPENAD" != x ; then
2914
2915 # ============ begin OpenAD specific section ==============
2916
2917 cat >>$MAKEFILE <<EOF
2918
2919 # all the source files linked from the various locations:
2920 ALL_LINKED_FILES= \
2921 \$(F77_SRC_FILES) \
2922 \$(C_SRC_FILES) \
2923 \$(H_SRC_FILES) \
2924 \$(F90_SRC_FILES) \
2925 \$(SPECIAL_FILES)
2926
2927 ifndef OPENADROOT
2928 \$(error "Error: environment variable OPENADROOT not defined!")
2929 endif
2930
2931 ifndef XAIFSCHEMAROOT
2932 \$(error "Error: environment variable XAIFSCHEMAROOT not defined!")
2933 endif
2934
2935 ifndef XAIFBOOSTERROOT
2936 \$(error "Error: environment variable XAIFBOOSTERROOT not defined!")
2937 endif
2938
2939 EOF
2940
2941 echo " Add the source list for common block to module conversion "
2942 echo >> $MAKEFILE
2943 printf "CB2M_F90_SRC_NAMES = " >> $MAKEFILE
2944 for i in `cat ${OAD_CB2M_FILES}` ; do
2945 echo " \\" >> $MAKEFILE
2946 printf " $i" >> $MAKEFILE
2947 done
2948 echo >> $MAKEFILE
2949
2950 echo " Add the source list for AD code generation"
2951 echo >> $MAKEFILE
2952 printf "AD_FILES = " >> $MAKEFILE
2953 for i in `cat ${OAD_CB2M_FILES}` ; do
2954 echo " \\" >> $MAKEFILE
2955 printf " ${i}_mod.f$FS90" >> $MAKEFILE
2956 done
2957 AD_FILES=`cat adSrcFiles.tmp`
2958 for i in $AD_FILES ; do
2959 basename=${i%%.f}
2960 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}`
2961 if test -z "$toBeIgnored" ; then
2962 echo " \\" >> $MAKEFILE
2963 printf " $i" >> $MAKEFILE
2964 fi
2965 done
2966 echo >> $MAKEFILE
2967 rm -f adSrcFiles.tmp
2968
2969 cat >>$MAKEFILE <<EOF
2970
2971 adAll: \$(EXE_AD)
2972 .PHONY: adAll
2973
2974 CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
2975
2976 .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)
2977
2978 .PHONY: adDepend
2979 adDepend: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(addsuffix _mod.FF90, \$(CB2M_F90_SRC_NAMES)) \$(F77_SRC_FILES:.F=_cb2m.FF90)
2980 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2981 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2982 -rm -f makedepend.out
2983
2984 OPENAD_SUPPORT_F90_SRC_FILES = \
2985 w2f__types.F90 \
2986 OAD_active.F90 \
2987 OAD_cp.F90 \
2988 OAD_rev.F90 \
2989 OAD_tape.F90
2990
2991 OPENAD_SUPPORT_C_SRC_FILES = \
2992 iaddr.c \
2993 timeRatio.c
2994
2995 f95_test_mods.f90: \$(OPENAD_SUPPORT_F90_SRC_FILES:F90=$FS90)
2996 cat \$^ > \$@
2997
2998 f95_test.f90: all_mods.xb.x2w.w2f.pp.f$FS90 \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
2999 cat \$^ > \$@
3000
3001 f95_test.out: f95_test_mods.f90 f95_test.f90
3002 f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1
3003 f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1
3004
3005 AD_OBJ_FILES=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) all_mods.xb.x2w.w2f.pp.o ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.o \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o)
3006
3007 \$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(AD_OBJ_FILES)
3008 @echo Creating \$@ ...
3009 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES) \$(LIBS)
3010
3011 # makefile debug rule
3012 openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3013 .PHONY: openad
3014
3015 # create the module files
3016 %_mod.FF90 : %.h ../OAD_support/cb2mGetModules.csh ../OAD_support/cb2mGetModules.awk
3017 ../OAD_support/cb2mGetModules.csh $< ../OAD_support/cb2mGetModules.awk
3018
3019 # create the header files
3020 %_mod.h : %.h ../OAD_support/cb2mGetHeaders.csh ../OAD_support/cb2mGetHeaders.awk
3021 ../OAD_support/cb2mGetHeaders.csh $< ../OAD_support/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES)
3022
3023 # change everybody else to use the new module files:
3024 %_cb2m.FF90 : %.F ../OAD_support/cb2mUseModules.bash
3025 ../OAD_support/cb2mUseModules.bash $< ${MPI}
3026
3027 # makefile debug rule
3028 small_f: \$(CB2M_F90_PP_SRC_FILES)
3029 .PHONY: small_f
3030
3031 ad_output.txt: \$(EXE_AD)
3032 @printf 'linking data files ... '
3033 \$(LN) -f ../input_ad/data* ../input_ad/eedata .
3034 \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .
3035 @printf 'running ... '
3036 @./\$(EXE_AD) > \$@
3037
3038 CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90)
3039 ad_input_code.f$FS90: ../OAD_support/maxMinDefs.f \$(CB2M_AD_FILES)
3040 cat \$^ > \$@
3041
3042 # strip all comments and blanks to reduce
3043 # the file size in order to reduce perl's memory requirements
3044 ad_input_code_sf.f$FS90 : ad_input_code.f$FS90
3045 cat \$^ | sed -f ../OAD_support/strip.sed | sed -f ../OAD_support/stop2print.sed > \$@
3046
3047 # mfef90 preprocessing
3048 # expand statement functions
3049 # expose mfef90 specific substring handling
3050 # add the w2f__types module
3051 ad_input_code_sf.w2f.f$FS90: ad_input_code_sf.f$FS90 mfef90 whirl2f whirl2f_be w2f__types.f90
3052 ./mfef90 -r8 -z -F -N132 \$<
3053 mv \$<.B \$(basename \$<).B
3054 ./whirl2f -openad \$(basename \$<).B
3055 cat w2f__types.f90 \$(basename \$<).w2f.f > \$@
3056
3057 # canonicalizer
3058 ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py
3059 ./preProcess.py -H -S \$< -o \$@
3060
3061 # F -> WHIRL
3062 # note that the canonicalized version cuts off at col 72
3063 # doing this also for string constants which is ok as long
3064 # as we are in fixed mode and cut of exactly there.
3065 # Otherwise mfef90 patches in spaces to fill up to 72 (or 132)
3066 # characters respectively.
3067 ad_input_code_sf.w2f.pre.B: ad_input_code_sf.w2f.pre.f$FS90 mfef90
3068 ./mfef90 -r8 -z -F \$<
3069 mv \$<.B \$@
3070
3071 # WHIRL -> XAIF
3072 ad_input_code_sf.w2f.pre.xaif : ad_input_code_sf.w2f.pre.B whirl2xaif
3073 ./whirl2xaif -s -n --debug 1 -o \$@ \$<
3074
3075 # XAIF -> XAIF'
3076 ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver
3077 ./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r
3078
3079 # XAIF' -> WHIRL'
3080 ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl
3081 ./xaif2whirl --debug 1 --structured ad_input_code_sf.w2f.pre.B \$<
3082
3083 # WHIRL' -> F'
3084 ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be
3085 ./whirl2f -FLIST:ftn_file=\$@ -openad \$<
3086
3087 # insert template directives
3088 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash
3089 ../OAD_support/insertTemplateDir.bash \$< \$@
3090
3091 PPEXTRAS=\$(wildcard ../OAD_support/ad_template.*.F) ../OAD_support/ad_inline.F
3092 # postprocess F'
3093 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 multi-pp.pl \$(PPEXTRAS:.F=.f)
3094 perl multi-pp.pl -inline=../OAD_support/ad_inline.f \$<
3095 # the postprocessor still gets the name wrong
3096 cat \$<.pp | sed 's/RETURN//' > \$@
3097
3098 # extract all transformed modules
3099 all_mods.xb.x2w.w2f.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3100 cat \$< | sed -n '/MODULE /,/END MODULE/p' > \$@
3101
3102 # remove the transformed globals module from the
3103 # transformed ad_input_code file
3104 # and remove for now the duplicate variables
3105 # and fix 2 data statements
3106 ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3107 cat \$< | sed '/MODULE /,/END MODULE/d' | sed '/^ INTEGER(w2f__i4) DOLOOP_UB/d' > \$@
3108
3109 # setup some links
3110 %.xsd:
3111 \$(LN) \${XAIFSCHEMAROOT}/schema/\$@ .
3112
3113 mfef90:
3114 \$(LN) \${OPEN64ROOT}/crayf90/sgi/mfef90 .
3115
3116 # link the support files:
3117 \$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES):
3118 \$(LN) ../OAD_support/\$@ .
3119
3120 whirl2xaif xaif2whirl:
3121 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3122
3123 %.pl:
3124 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3125
3126 preProcess.py:
3127 \$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ .
3128
3129 whirl2f whirl2f_be:
3130 \$(LN) \${OPEN64ROOT}/whirl2f/\$@ .
3131
3132 oadDriver:
3133 \$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@
3134
3135 # ============ end OpenAD specific section ==============
3136
3137 EOF
3138
3139 fi
3140
3141 #=========================================
3142
3143 if test "x$EXEHOOK" != x ; then
3144 printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
3145 fi
3146
3147 echo " Making list of \"exceptions\" that need \".p\" files"
3148 for i in $KPPFILES ; do
3149 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3150 RETVAL=$?
3151 if test "x$RETVAL" != x0 ; then
3152 echo "Error: unable to add file \"$i\" to the exceptions list"
3153 fi
3154 echo "$base.$FS: $base.p" >> $MAKEFILE
3155 done
3156
3157 echo " Making list of NOOPTFILES"
3158 for i in $NOOPTFILES ; do
3159 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3160 RETVAL=$?
3161 if test "x$RETVAL" != x0 ; then
3162 echo "Error: unable to add file \"$i\" to the exceptions list"
3163 fi
3164 echo "$base.o: $base.$FS" >> $MAKEFILE
3165 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
3166 done
3167
3168 echo " Add rules for links"
3169 cat srclinks.tmp >> $MAKEFILE
3170 rm -f srclinks.tmp
3171
3172 echo " Adding makedepend marker"
3173 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
3174
3175 printf "\n=== Done ===\n"
3176
3177 # Create special header files
3178 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
3179 if test ! -f $PACKAGES_DOT_H ; then
3180 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3181 else
3182 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
3183 RETVAL=$?
3184 if test "x$RETVAL" = x0 ; then
3185 rm -f $PACKAGES_DOT_H".tmp"
3186 else
3187 mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
3188 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3189 fi
3190 fi
3191 if test ! -f AD_CONFIG.h ; then
3192 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
3193 fi
3194
3195
3196 # Write the "state" for future records
3197 if test "x$DUMPSTATE" != xf ; then
3198 printf "" > genmake_state
3199 for i in $gm_state ; do
3200 t1="t2=\$$i"
3201 eval $t1
3202 echo "$i='$t2'" >> genmake_state
3203 done
3204 fi

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