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Revision 1.183 - (show annotations) (download)
Wed Jan 14 20:08:40 2009 UTC (10 years, 11 months ago) by utke
Branch: MAIN
CVS Tags: checkpoint61h, checkpoint61i
Changes since 1.182: +5 -5 lines
fixed naming

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.182 2009/01/14 17:02:01 utke Exp $
4 #
5 # Makefile generator for MITgcm UV codes
6 # created by cnh 03/98
7 # adapted by aja 06/98
8 # modified by aja 01/00
9 # rewritten in bash by eh3 08/03
10
11 # Search for particular CPP #cmds associated with packages
12 # usage: test_for_package_in_cpp_options CPP_file package_name
13 test_for_package_in_cpp_options() {
14 cpp_options=$1
15 pkg=$2
16 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
17 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
18 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
19 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
20 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
21 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
22 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
23 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
24 }
25
26 # Search for particular CPP #cmds associated with MPI
27 # usage: test_for_mpi_in_cpp_eeoptions CPP_file
28 test_for_mpi_in_cpp_eeoptions() {
29 cpp_options=$1
30 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
31 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
32 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
33 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
34 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
35 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
36 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
37 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
38 }
39
40 # Search for particular string in a file. Return 1 if detected, 0 if not
41 # usage: test_for_string_in_file file string
42 test_for_string_in_file() {
43 file=$1
44 strng=$2
45 grep -i "$strng" $file > /dev/null 2>&1
46 RETVAL=$?
47 if test "x${RETVAL}" = x0 ; then
48 printf "Error: In $file there is an illegal line: "
49 grep -i "$strng" $file
50 exit 99
51 fi
52 return 0
53 }
54
55 # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
56 # the package list.
57 expand_pkg_groups() {
58 new_packages=
59 PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups"
60 if test -r $PKG_GROUPS ; then
61 cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
62 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
63 matched=0
64 for i in $PACKAGES ; do
65 line=`grep "^ *$i" ./p2.tmp`
66 RETVAL=$?
67 if test "x$RETVAL" = x0 ; then
68 matched=1
69 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
70 echo " replacing \"$i\" with: $replace"
71 new_packages="$new_packages $replace"
72 else
73 new_packages="$new_packages $i"
74 fi
75 done
76 PACKAGES=$new_packages
77 rm -f ./p[1,2].tmp
78 return $matched
79 else
80 echo "Warning: can't read package groups definition file: $PKG_GROUPS"
81 fi
82 }
83
84 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
85 # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
86 check_for_broken_Ff() {
87 # Do we have defaults for $FS and/or $FS90 ?
88 tfs=f
89 tfs9=f90
90 if test "x$FS" != x ; then
91 tfs="$FS"
92 fi
93 if test "x$FS90" != x ; then
94 tfs9="$FS90"
95 fi
96
97 # First check the ability to create a *.F/.f pair.
98 cat <<EOF >> genmake_hello.F
99 program hello
100 write(*,*) 'hi'
101 stop
102 end
103 EOF
104 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
105 RETVAL=$?
106 if test "x$RETVAL" != x0 ; then
107 if test "x$FS" = x ; then
108 FS='for'
109 FS90='fr9'
110 check_for_broken_Ff
111 else
112 cat <<EOF 2>&1
113 ERROR: Your file system cannot distinguish between *.F and *.f files
114 (fails the "cp" test) and this program cannot find a suitable
115 replacement extension. Please try a different build environment or
116 contact the <MITgcm-support@mitgcm.org> list for help.
117
118 EOF
119 exit -1
120 fi
121 return
122 fi
123 rm -f genmake_hello.*
124
125 # Check the ability of ${MAKE} and ${LN} to use the current set
126 # of extensions.
127 cat <<EOF >> genmake_hello.F
128 program hello
129 write(*,*) 'hi'
130 stop
131 end
132 EOF
133 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
134 cat <<EOF >> $MAKEFILE
135 .SUFFIXES:
136 .SUFFIXES: .$tfs .F
137 .F.$tfs:
138 $LN \$< \$@
139 EOF
140 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
141 RETVAL=$?
142 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
143 if test "x$FS" = x ; then
144 FS='for'
145 FS90='fr9'
146 check_for_broken_Ff
147 else
148 cat <<EOF 2>&1
149 ERROR: Your file system cannot distinguish between *.F and *.f files
150 (fails the "make/ln" test) and this program cannot find a suitable
151 replacement extension. Please try a different build environment or
152 contact the <MITgcm-support@mitgcm.org> list for help.
153
154 EOF
155 exit -1
156 return
157 fi
158 fi
159 rm -f genmake_hello.* $MAKEFILE
160 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
161
162 # If we make it here, use the extensions
163 FS=$tfs
164 FS90=$tfs9
165 return
166 }
167
168
169 look_for_makedepend() {
170
171 # The "original" makedepend is part of the Imake system that is
172 # most often distributed with XFree86 or with an XFree86 source
173 # package. As a result, many machines (eg. generic Linux) do not
174 # have a system-default "makedepend" available. For those
175 # systems, we have two fall-back options:
176 #
177 # 1) a makedepend implementation shipped with the cyrus-imapd
178 # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
179 #
180 # 2) a known-buggy xmakedpend shell script
181 #
182 # So the choices are, in order:
183 #
184 # 1) use the user-specified program
185 # 2) use a system-wide default
186 # 3) locally build and use the cyrus implementation
187 # 4) fall back to the buggy local xmakedpend script
188 #
189 if test "x${MAKEDEPEND}" = x ; then
190 which makedepend > /dev/null 2>&1
191 RV0=$?
192 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
193 # echo 'MAKEFILE="'$MAKEFILE'"'
194 cat <<EOF >> $MAKEFILE
195 # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
196 #
197 # Some "makedepend" implementations will die if they cannot
198 # find a Makefile -- so this file is here to gives them an
199 # empty one to find and parse.
200 EOF
201 cat <<EOF >> genmake_tc.f
202 program test
203 write(*,*) 'test'
204 stop
205 end
206 EOF
207 makedepend genmake_tc.f > /dev/null 2>&1
208 RV1=$?
209 test -f $MAKEFILE && rm -f $MAKEFILE
210 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
211 if test "x${RV0}${RV1}" = x00 ; then
212 MAKEDEPEND=makedepend
213 else
214 echo " a system-default makedepend was not found."
215
216 # Try to build the cyrus implementation
217 build_cyrus_makedepend
218 RETVAL=$?
219 if test "x$RETVAL" != x0 ; then
220 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
221 fi
222 rm -f ./genmake_cy_md
223 fi
224 else
225 # echo "MAKEDEPEND=${MAKEDEPEND}"
226 echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
227 RETVAL=$?
228 if test x"$RETVAL" = x0 ; then
229 build_cyrus_makedepend
230 fi
231 fi
232 }
233
234
235 build_cyrus_makedepend() {
236 rm -f ./genmake_cy_md
237 (
238 cd $ROOTDIR/tools/cyrus-imapd-makedepend \
239 && ./configure > /dev/null 2>&1 \
240 && make > /dev/null 2>&1
241 if test -x ./makedepend.exe ; then
242 $LN ./makedepend.exe ./makedepend
243 fi
244 ./makedepend ifparser.c > /dev/null 2>&1 \
245 && echo "true"
246 ) > ./genmake_cy_md
247 grep true ./genmake_cy_md > /dev/null 2>&1
248 RETVAL=$?
249 rm -f ./genmake_cy_md
250 if test "x$RETVAL" = x0 ; then
251 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
252 return 0
253 else
254 echo "WARNING: unable to build cyrus-imapd-makedepend"
255 return 1
256 fi
257 }
258
259
260 build_embed_encode()
261 {
262 printf " building the embed-encode utility... "
263 if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
264 if test ! -d "$ROOTDIR/tools/embed_encode" ; then
265 echo
266 echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
267 echo
268 EMBED_SRC=f
269 return 1
270 fi
271 clist="cc gcc c89 $CC"
272 for ic in $clist ; do
273 comm="$ic -o encode_files encode_files.c"
274 ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
275 RETVAL=$?
276 if test "x$RETVAL" = x0 ; then
277 echo "OK"
278 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
279 return 0
280 fi
281 done
282 echo
283 echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
284 echo " so it has been disabled"
285 echo
286 EMBED_SRC=f
287 return 1
288 fi
289 echo "OK"
290 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
291 }
292
293
294 # Guess possible config options for this host
295 find_possible_configs() {
296
297 tmp1=`uname`"_"`uname -m`
298 tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
299 tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
300 tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
301 tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
302 tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
303 PLATFORM=$tmp3
304 echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
305 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
306 echo " The platform appears to be: $PLATFORM"
307
308 echo "test" > test
309 ln -s ./test link
310 RETVAL=$?
311 if test "x${RETVAL}" = x0 ; then
312 LN="ln -s"
313 else
314 echo "Error: \"ln -s\" does not appear to work on this system!"
315 echo " For help, please contact <MITgcm-support@mitgcm.org>."
316 exit 1
317 fi
318 rm -f test link
319
320 if test "x$CPP" = x ; then
321 CPP="cpp -traditional -P"
322 fi
323
324 look_for_makedepend
325
326 #================================================================
327 # look for possible C compilers
328 tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
329 p_CC=
330 for c in $tmp ; do
331 rm -f ./genmake_hello.c ./genmake_hello
332 cat >> genmake_hello.c << EOF
333 #include <stdio.h>
334 int main(int argc, char **argv) {
335 printf("Hello!\n");
336 return 0;
337 }
338 EOF
339 $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
340 RETVAL=$?
341 if test "x${RETVAL}" = x0 ; then
342 p_CC="$p_CC $c"
343 fi
344 done
345 rm -f ./genmake_hello.c ./genmake_hello
346 if test "x${p_CC}" = x ; then
347 cat 1>&2 <<EOF
348
349 Error: No C compilers were found in your path. Please specify one using:
350
351 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
352 2) the CC or MITGCM_CC environment variables.
353
354 EOF
355 exit 1
356 else
357 echo " The possible C compilers found in your path are:"
358 echo " "$p_CC
359 if test "x$CC" = x ; then
360 CC=`echo $p_CC | $AWK '{print $1}'`
361 echo " Setting C compiler to: "$CC
362 fi
363 fi
364
365 #================================================================
366 # look for possible FORTRAN compilers
367 tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 gfortran g95"
368 p_FC=
369 for c in $tmp ; do
370 rm -f ./hello.f ./hello
371 cat >> hello.f <<EOF
372 program hello
373 do i=1,3
374 print *, 'hello world : ', i
375 enddo
376 end
377 EOF
378 $c -o hello hello.f > /dev/null 2>&1
379 RETVAL=$?
380 if test "x${RETVAL}" = x0 ; then
381 p_FC="$p_FC $c"
382 fi
383 done
384 rm -f ./hello.f ./hello
385 if test "x${p_FC}" = x ; then
386 cat 1>&2 <<EOF
387
388 Error: No Fortran compilers were found in your path. Please specify one using:
389
390 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
391 2) a command-line option (eg. "-fc NAME"), or
392 3) the FC or MITGCM_FC environment variables.
393
394 EOF
395 exit 1
396 else
397 echo " The possible FORTRAN compilers found in your path are:"
398 echo " "$p_FC
399 fi
400
401 # Use the first of the compilers found in the current PATH
402 # that has a correctly-named optfile
403 if test "x$OPTFILE" = x -a "x$FC" = x ; then
404 for i in $p_FC ; do
405 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
406 if test -r $OPTFILE ; then
407 echo " Setting OPTFILE to: "$OPTFILE
408 break
409 fi
410 done
411 fi
412
413 if test "x$OPTFILE" = x ; then
414 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
415 if test ! -r $OPTFILE ; then
416 echo " I looked for the file "$OPTFILE" but did not find it"
417 fi
418 fi
419 # echo " The options file: $p_OF"
420 # echo " appears to match so we'll use it."
421 # for i in $p_FC ; do
422 #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
423 #if test -r $p_OF ; then
424 # OPTFILE=$p_OF
425 # echo " The options file: $p_OF"
426 # echo " appears to match so we'll use it."
427 # break
428 #fi
429 # done
430 if test "x$OPTFILE" = x ; then
431 cat 1>&2 <<EOF
432
433 Error: No options file was found in: $ROOTDIR/tools/build_options/
434 that matches this platform ("$PLATFORM") and the compilers found in
435 your path. Please specify an "optfile" using:
436
437 1) the command line (eg. "-optfile=path/to/OPTFILE"), or
438 2) the MITGCM_OF environment variable.
439
440 If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
441
442 EOF
443 exit 1
444 fi
445
446 # # look for possible MPI libraries
447 # mpi_libs=
448 # mpi_fort=`which mpif77 2>/dev/null`
449 # RETVAL=$?
450 # if test "x${RETVAL}" = x0 ; then
451 # cat >>test.f <<EOF
452 # PROGRAM HELLO
453 # DO 10, I=1,10
454 # PRINT *,'Hello World'
455 # 10 CONTINUE
456 # STOP
457 # END
458 # EOF
459 # eval "$mpi_fort -showme test.f > out"
460 # RETVAL=$?
461 # if test "x${RETVAL}" = x0 ; then
462 # a=`cat out`
463 # for i in $a ; do
464 # case $i in
465 # -*)
466 # mpi_libs="$mpi_libs $i" ;;
467 # esac
468 # done
469 # echo "The MPI libs appear to be:"
470 # echo " "$mpi_libs
471 # fi
472 # rm -f test.f out
473 # fi
474
475 }
476
477 # Parse the package dependency information
478 get_pdepend_list() {
479
480 # strip the comments and then convert the dependency file into
481 # two arrays: PNAME, DNAME
482 cat $1 | sed -e 's/#.*$//g' \
483 | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
484 > ./.pd_tmp
485 . ./.pd_tmp
486 rm -f ./.pd_tmp
487
488 printf "PNAME = "${}
489 }
490
491
492 # Explain usage
493 usage() {
494 cat <<EOF
495
496 Usage: "$0" [OPTIONS]
497 where [OPTIONS] can be:
498
499 -help | --help | -h | --h
500 Print this help message and exit.
501
502 -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
503 -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
504 Use "NAME" as the adoptfile. By default, the file at
505 "tools/adjoint_options/adjoint_default" will be used.
506
507 -nooptfile | --nooptfile
508 -optfile NAME | --optfile NAME | -of NAME | --of NAME
509 -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
510 Use "NAME" as the optfile. By default, an attempt will be
511 made to find an appropriate "standard" optfile in the
512 tools/build_options/ directory.
513
514 -pdepend NAME | --pdepend NAME
515 -pdepend=NAME | --pdepend=NAME
516 Get package dependency information from "NAME".
517
518 -pdefault NAME | --pdefault NAME
519 -pdefault=NAME | --pdefault=NAME
520 Get the default package list from "NAME".
521
522 -make NAME | -m NAME
523 --make=NAME | -m=NAME
524 Use "NAME" for the MAKE program. The default is "make" but
525 many platforms, "gmake" is the preferred choice.
526
527 -makefile NAME | -mf NAME
528 --makefile=NAME | -mf=NAME
529 Call the makefile "NAME". The default is "Makefile".
530
531 -makedepend NAME | -md NAME
532 --makedepend=NAME | -md=NAME
533 Use "NAME" for the MAKEDEPEND program.
534
535 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
536 -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
537 Specify the location of the MITgcm ROOTDIR as "NAME".
538 By default, genamke will try to find the location by
539 looking in parent directories (up to the 5th parent).
540
541 -mods NAME | --mods NAME | -mo NAME | --mo NAME
542 -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
543 Here, "NAME" specifies a list of directories that are
544 used for additional source code. Files found in the
545 "mods list" are given preference over files of the same
546 name found elsewhere.
547
548 -disable NAME | --disable NAME
549 -disable=NAME | --disable=NAME
550 Here "NAME" specifies a list of packages that we don't
551 want to use. If this violates package dependencies,
552 genamke will exit with an error message.
553
554 -enable NAME | --enable NAME
555 -enable=NAME | --enable=NAME
556 Here "NAME" specifies a list of packages that we wish
557 to specifically enable. If this violates package
558 dependencies, genamke will exit with an error message.
559
560 -standarddirs NAME | --standarddirs NAME
561 -standarddirs=NAME | --standarddirs=NAME
562 Here, "NAME" specifies a list of directories to be
563 used as the "standard" code.
564
565 -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
566 -fc=NAME | --fc=NAME
567 Use "NAME" as the fortran compiler. By default, genmake
568 will search for a working compiler by trying a list of
569 "usual suspects" such as g77, f77, etc.
570
571 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
572 Use "NAME" as the C compiler. By default, genmake
573 will search for a working compiler by trying a list of
574 "usual suspects" such as gcc, c89, cc, etc.
575
576 -[no]ieee | --[no]ieee
577 Do or don't use IEEE numerics. Note that this option
578 *only* works if it is supported by the OPTFILE that
579 is being used.
580
581 -ignoretime | -ignore_time | --ignoretime | --ignore_time
582 Ignore all the "wall clock" routines entirely. This will
583 not in any way hurt the model results -- it simply means
584 that the code that checks how long the model spends in
585 various routines will give junk values.
586
587 -ts | --ts
588 Produce timing information per timestep
589 -papis | --papis
590 Produce summary MFlop/s (and IPC) with PAPI per timestep
591 -pcls | --pcls
592 Produce summary MFlop/s etc. with PCL per timestep
593 -foolad | --foolad
594 Fool the AD code generator
595 -papi | --papi
596 Performance analysis with PAPI
597 -pcl | --pcl
598 Performance analysis with PCL
599 -hpmt | --hpmt
600 Performance analysis with the HPM Toolkit
601
602 -gsl | --gsl
603 Use GSL to control floating point rounding and precision
604 -devel | --devel
605 Add additional warning and debugging flags for development
606
607 -mpi | --mpi
608 Include MPI header files and link to MPI libraries
609 -mpi=PATH | --mpi=PATH
610 Include MPI header files and link to MPI libraries using MPI_ROOT
611 set to PATH. i.e. Include files from \$PATH/include, link to libraries
612 from \$PATH/lib and use binaries from \$PATH/bin.
613
614 -es | --es | -embed-source | --embed-source
615 Embed a tarball containing the full source code
616 (including the Makefile, etc.) used to build the
617 executable [off by default]
618
619 -bash NAME
620 Explicitly specify the Bourne or BASH shell to use
621
622 While it is most often a single word, the "NAME" variables specified
623 above can in many cases be a space-delimited string such as:
624
625 --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
626 -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
627 -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
628
629 which, depending upon your shell, may need to be single-quoted.
630
631 For more detailed genmake documentation, please see:
632
633 http://mitgcm.org/devel_HOWTO/
634
635 EOF
636
637 exit 1
638 }
639
640 # Build a CPP macro to automate calling C routines from FORTRAN
641 get_fortran_c_namemangling() {
642
643 #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
644 if test ! "x$FC_NAMEMANGLE" = x ; then
645 return 0
646 fi
647
648 default_nm="#define FC_NAMEMANGLE(X) X ## _"
649
650 cat > genmake_test.c <<EOF
651 void tcall( char * string ) { tsub( string ); }
652 EOF
653 $MAKE genmake_test.o >> genmake_warnings 2>&1
654 RETVAL=$?
655 if test "x$RETVAL" != x0 ; then
656 FC_NAMEMANGLE=$default_nm
657 cat <<EOF>> genmake_errors
658
659 WARNING: C test compile fails
660 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
661 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
662 EOF
663 return 1
664 fi
665 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
666 RETVAL=$?
667 if test "x$RETVAL" != x0 ; then
668 FC_NAMEMANGLE=$default_nm
669 cat <<EOF>> genmake_warnings
670
671 WARNING: The "nm" command failed.
672 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
673 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
674 EOF
675 return 1
676 fi
677 cat > genmake_tcomp.$FS <<EOF
678 subroutine tcall( string )
679 character*(*) string
680 call tsub( string )
681 end
682 EOF
683 $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
684 RETVAL=$?
685 if test "x$RETVAL" != x0 ; then
686 FC_NAMEMANGLE=$default_nm
687 cat <<EOF>> genmake_warnings
688
689 WARNING: FORTRAN test compile fails -- please see "genmake_errors"
690 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
691 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
692 EOF
693 return 1
694 fi
695 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
696 RETVAL=$?
697 if test "x$RETVAL" != x0 ; then
698 FC_NAMEMANGLE=$default_nm
699 cat <<EOF>> genmake_warnings
700
701 WARNING: The "nm" command failed.
702 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
703 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
704 EOF
705 return 1
706 fi
707
708 c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
709 f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
710 c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
711 f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
712
713 nmangle="X"
714 if test "x$c_a" != "x$f_a" ; then
715 comm="echo x$f_a | sed -e 's|x$c_a||'"
716 a=`eval $comm`
717 nmangle="$a ## $nmangle"
718 fi
719 if test "x$c_b" != "x$f_b" ; then
720 comm="echo x$f_b | sed -e 's|x$c_b||'"
721 b=`eval $comm`
722 nmangle="$nmangle ## $b"
723 fi
724
725 FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
726
727 # cleanup the testing files
728 rm -f genmake_tcomp.* genmake_test.*
729 }
730
731
732 check_HAVE_CLOC() {
733 get_fortran_c_namemangling
734 cat <<EOF > genmake_tc_1.c
735 $FC_NAMEMANGLE
736 #include <stdio.h>
737 #include <stdlib.h>
738 #include <unistd.h>
739 #include <assert.h>
740 #include <sys/time.h>
741 void FC_NAMEMANGLE(cloc) ( double *curtim )
742 {
743 struct timeval tv1;
744 gettimeofday(&tv1 , (void *)NULL );
745 *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
746 *curtim = *curtim/1.E6;
747 }
748 EOF
749 COMM="$CC $CFLAGS -c genmake_tc_1.c"
750 echo $COMM >> genmake_warnings
751 $COMM >> genmake_warnings 2>&1
752 RET_C=$?
753 cat <<EOF > genmake_tc_2.$FS
754 program hello
755 REAL*8 wtime
756 external cloc
757 call cloc(wtime)
758 print *," HELLO WORLD", wtime
759 end
760 EOF
761 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
762 echo $COMM >> genmake_warnings
763 $COMM >> genmake_warnings 2>&1
764 RET_F=$?
765 test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1
766 RETVAL=$?
767 if test "x$RETVAL" = x0 ; then
768 HAVE_CLOC=t
769 DEFINES="$DEFINES -DHAVE_CLOC"
770 fi
771 rm -f genmake_tc*
772 }
773
774
775 check_HAVE_SIGREG() {
776 if test ! "x$HAVE_SIGREG" = x ; then
777 return
778 fi
779 get_fortran_c_namemangling
780 cat <<EOF > genmake_tc_1.c
781 $FC_NAMEMANGLE
782 #include <stdlib.h>
783 #include <stdio.h>
784 #include <signal.h>
785 #include <errno.h>
786 #include <ucontext.h>
787
788 int * ip;
789
790 static void killhandler(
791 unsigned int sn, siginfo_t si, struct ucontext *sc )
792 {
793 *ip = *ip + 1;
794 return;
795 }
796
797 void FC_NAMEMANGLE(sigreg) (int * aip)
798 {
799 struct sigaction s;
800 ip = aip;
801 s.sa_flags = SA_SIGINFO;
802 s.sa_sigaction = (void *)killhandler;
803 if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
804 printf("Sigaction returned error = %d\n", errno);
805 exit(0);
806 }
807 return;
808 }
809 EOF
810 COMM="$CC $CFLAGS -c genmake_tc_1.c"
811 echo $COMM >> genmake_warnings
812 $COMM >> genmake_warnings 2>&1
813 RET_C=$?
814 cat <<EOF > genmake_tc_2.$FS
815 program hello
816 integer anint
817 common /iv/ anint
818 external sigreg
819 call sigreg(anint)
820 end
821 EOF
822 echo >> genmake_warnings
823 echo "running: check_HAVE_SIGREG()" >> genmake_warnings
824 cat genmake_tc_2.$FS >> genmake_warnings
825 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
826 echo $COMM >> genmake_warnings
827 $COMM >> genmake_warnings 2>&1
828 RETVAL=$?
829 if test "x$RETVAL" = x0 ; then
830 HAVE_SIGREG=t
831 DEFINES="$DEFINES -DHAVE_SIGREG"
832 fi
833 rm -f genmake_tc*
834 }
835
836
837 check_HAVE_SETRLSTK() {
838 if test "x$HAVE_SETRLSTK" = xt ; then
839 DEFINES="$DEFINES -DHAVE_SETRLSTK"
840 return
841 fi
842 if test ! "x$HAVE_SETRLSTK" = x ; then
843 return
844 fi
845 get_fortran_c_namemangling
846 cat <<EOF > genmake_tc_1.c
847 $FC_NAMEMANGLE
848 #include <sys/time.h>
849 #include <sys/resource.h>
850 #include <unistd.h>
851 void FC_NAMEMANGLE(setrlstk) ()
852 {
853 struct rlimit rls;
854 rls.rlim_cur = RLIM_INFINITY;
855 rls.rlim_max = RLIM_INFINITY;
856 setrlimit(RLIMIT_STACK, &rls);
857 return;
858 }
859 EOF
860 COMM="$CC $CFLAGS -c genmake_tc_1.c"
861 echo $COMM >> genmake_warnings
862 $COMM >> genmake_warnings 2>&1
863 RET_C=$?
864 cat <<EOF > genmake_tc_2.$FS
865 program hello
866 external setrlstk
867 call setrlstk()
868 end
869 EOF
870 echo >> genmake_warnings
871 echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
872 cat genmake_tc_2.$FS >> genmake_warnings
873 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
874 echo $COMM >> genmake_warnings
875 $COMM >> genmake_warnings 2>&1
876 RETVAL=$?
877 if test "x$RETVAL" = x0 ; then
878 HAVE_SETRLSTK=t
879 DEFINES="$DEFINES -DHAVE_SETRLSTK"
880 fi
881 rm -f genmake_tc*
882 }
883
884
885 check_HAVE_STAT() {
886 get_fortran_c_namemangling
887 cat <<EOF > genmake_tc_1.c
888 $FC_NAMEMANGLE
889 #include <stdio.h>
890 #include <stdlib.h>
891 #include <unistd.h>
892 #include <sys/stat.h>
893 #include <sys/types.h>
894 void FC_NAMEMANGLE(tfsize) ( int *nbyte )
895 {
896 char name[512];
897 struct stat astat;
898
899 name[0] = 'a'; name[1] = '\0';
900 if (! stat(name, &astat))
901 *nbyte = (int)(astat.st_size);
902 else
903 *nbyte = -1;
904 }
905 EOF
906 COMM="$CC $CFLAGS -c genmake_tc_1.c"
907 echo $COMM >> genmake_warnings
908 $COMM >> genmake_tc.log 2>&1
909 RET_C=$?
910 cat <<EOF > genmake_tc_2.$FS
911 program hello
912 integer nbyte
913 call tfsize(nbyte)
914 print *," HELLO WORLD", nbyte
915 end
916 EOF
917 echo >> genmake_warnings
918 echo "running: check_HAVE_STAT()" >> genmake_warnings
919 cat genmake_tc_2.$FS >> genmake_warnings
920 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
921 echo $COMM >> genmake_warnings
922 $COMM >> genmake_tc.log 2>&1
923 RETVAL=$?
924 if test "x$RETVAL" = x0 ; then
925 HAVE_STAT=t
926 DEFINES="$DEFINES -DHAVE_STAT"
927 fi
928 rm -f genmake_tc*
929 }
930
931
932 check_netcdf_libs() {
933 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
934 return
935 fi
936 echo >> genmake_warnings
937 echo "running: check_netcdf_libs()" >> genmake_warnings
938 cat <<EOF > genmake_tnc.F
939 program fgennc
940 #include "netcdf.inc"
941 EOF
942 if test ! "x$MPI" = x ; then
943 echo '#include "mpif.h"' >> genmake_tnc.F
944 fi
945 cat <<EOF >> genmake_tnc.F
946 integer iret, ncid, xid
947 iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
948 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
949 iret = nf_def_dim(ncid, 'X', 11, xid)
950 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
951 iret = nf_close(ncid)
952 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
953 end
954 EOF
955 echo "=== genmake_tnc.F ===" > genmake_tnc.log
956 cat genmake_tnc.F >> genmake_tnc.log
957 echo "=== genmake_tnc.F ===" >> genmake_tnc.log
958 RET_CPP=f
959 COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
960 echo "$COMM" >> genmake_tnc.log
961 eval $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
962 if test "x$RET_CPP" = xf ; then
963 echo " WARNING: CPP failed to pre-process the netcdf test." \
964 >> genmake_tnc.log
965 echo " Please check that \$INCLUDES is properly set." \
966 >> genmake_tnc.log
967 fi
968 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
969 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
970 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
971 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
972 RET_COMPILE=$?
973 cat genmake_tnc.log >> genmake_warnings
974
975 #EH3 Remove test program execution for machines that either disallow
976 #EH3 execution or cannot support it (eg. cross-compilers)
977 #EH3
978 #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
979 #EH3 RETVAL=$?
980 #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
981
982 if test "x$RET_COMPILE" = x0 ; then
983 HAVE_NETCDF=t
984 else
985 # try again with "-lnetcdf" added to the libs
986 echo "try again with added '-lnetcdf'" > genmake_tnc.log
987 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
988 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
989 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
990 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
991 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
992 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
993 RET_COMPILE=$?
994 cat genmake_tnc.log >> genmake_warnings
995 if test "x$RET_COMPILE" = x0 ; then
996 LIBS="$LIBS -lnetcdf"
997 HAVE_NETCDF=t
998 else
999 # try again with "-lnetcdff" added to the libs
1000 echo "try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
1001 echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
1002 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
1003 echo " && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
1004 cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null \
1005 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
1006 && $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
1007 RET_COMPILE=$?
1008 cat genmake_tnc.log >> genmake_warnings
1009 if test "x$RET_COMPILE" = x0 ; then
1010 LIBS="$LIBS -lnetcdff -lnetcdf"
1011 HAVE_NETCDF=t
1012 fi
1013 fi
1014 fi
1015 rm -f genmake_tnc*
1016 }
1017
1018
1019
1020 ###############################################################################
1021 # Sequential part of script starts here
1022 ###############################################################################
1023
1024 # Set defaults here
1025 COMMANDL="$0 $@"
1026
1027 PLATFORM=
1028 LN=
1029 S64=
1030 KPP=
1031 #FC=
1032 #CC=gcc
1033 #CPP=
1034 LINK=
1035 DEFINES=
1036 PACKAGES=
1037 ENABLE=
1038 DISABLE=
1039 # MAKEFILE=
1040 # MAKEDEPEND=
1041 PDEPEND=
1042 DUMPSTATE=t
1043 PDEFAULT=
1044 OPTFILE=
1045 INCLUDES="-I. $INCLUDES"
1046 FFLAGS=
1047 FOPTIM=
1048 FEXTRAFLAGS=
1049 USE_EXTENDED_SRC=
1050 EXTENDED_SRC_FLAG=
1051 CFLAGS=
1052 KFLAGS1=
1053 KFLAGS2=
1054 #LDADD=
1055 LIBS=
1056 KPPFILES=
1057 NOOPTFILES=
1058 NOOPTFLAGS=
1059 MPI=
1060 MPIPATH=
1061 TS=
1062 PAPIS=
1063 PCLS=
1064 FOOLAD=
1065 PAPI=
1066 PCL=
1067 HPMT=
1068 GSL=
1069 DEVEL=
1070 HAVE_TEST_L=
1071
1072 # DEFINES checked by test compilation or command-line
1073 HAVE_SYSTEM=
1074 HAVE_FDATE=
1075 FC_NAMEMANGLE=
1076 HAVE_CLOC=
1077 # HAVE_SETRLSTK=
1078 HAVE_STAT=
1079 HAVE_NETCDF=
1080 HAVE_ETIME=
1081 IGNORE_TIME=
1082
1083 MODS=
1084 TOOLSDIR=
1085 SOURCEDIRS=
1086 INCLUDEDIRS=
1087 STANDARDDIRS="USE_THE_DEFAULT"
1088
1089 G2ARGS=
1090 BASH=
1091 PWD=`pwd`
1092 test "x$MAKE" = x && MAKE=make
1093 test "x$AWK" = x && AWK=awk
1094 EMBED_SRC=
1095 THISHOST=`hostname`
1096 THISCWD=`pwd`
1097 THISDATE=`date`
1098 THISUSER=`echo $USER`
1099 THISVER=
1100 MACHINE=`uname -a`
1101 EXECUTABLE=
1102 EXEHOOK=
1103 EXEDIR=
1104 PACKAGES_CONF=
1105 IEEE=
1106 if test "x$MITGCM_IEEE" != x ; then
1107 IEEE=$MITGCM_IEEE
1108 fi
1109 FS=
1110 FS90=
1111
1112 AUTODIFF_PKG_USED=f
1113 AD_OPTFILE=
1114 TAF=
1115 AD_TAF_FLAGS=
1116 FTL_TAF_FLAGS=
1117 SVD_TAF_FLAGS=
1118 TAF_EXTRA=
1119 TAMC=
1120 AD_TAMC_FLAGS=
1121 FTL_TAF_FLAGS=
1122 SVD_TAMC_FLAGS=
1123 TAMC_EXTRA=
1124
1125
1126 # The following state can be set directly by command-line switches
1127 gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1128 gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS"
1129
1130 # The following state is not directly set by command-line switches
1131 gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM FEXTRAFLAGS"
1132 gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1133 gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1134 gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1135 gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1136
1137 # The following are all related to adjoint/tangent-linear stuff
1138 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1139 gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1140 gm_s12="TAF_EXTRA TAMC_EXTRA"
1141
1142 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
1143 gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1144
1145 cat <<EOF
1146
1147 GENMAKE :
1148
1149 A program for GENerating MAKEfiles for the MITgcm project. For a
1150 quick list of options, use "genmake -h" or for more detail see:
1151
1152 http://mitgcm.org/devel_HOWTO/
1153
1154 EOF
1155
1156 echo "=== Processing options files and arguments ==="
1157 gm_local="genmake_local"
1158 printf " getting local config information: "
1159 if test -f $gm_local ; then
1160 echo "using $gm_local"
1161 . $gm_local
1162 # echo "DISABLE=$DISABLE"
1163 # echo "ENABLE=$ENABLE"
1164 else
1165 echo "none found"
1166 fi
1167
1168 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1169 #OPTIONS=
1170 #n=0
1171 #for i ; do
1172 # echo "$i $n"
1173 # setvar="OPTIONS[$n]='$i'"
1174 # # echo " $setvar"
1175 # eval "$setvar"
1176 # n=$(( $n + 1 ))
1177 #done
1178 #parse_options
1179 ac_prev=
1180 for ac_option in "$@" ; do
1181
1182 G2ARGS="$G2ARGS \"$ac_option\""
1183
1184 # If the previous option needs an argument, assign it.
1185 if test -n "$ac_prev"; then
1186 eval "$ac_prev=\$ac_option"
1187 ac_prev=
1188 continue
1189 fi
1190
1191 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1192
1193 case $ac_option in
1194
1195 -help | --help | -h | --h)
1196 usage ;;
1197
1198 -nooptfile | --nooptfile)
1199 OPTFILE="NONE" ;;
1200 -optfile | --optfile | -of | --of)
1201 ac_prev=OPTFILE ;;
1202 -optfile=* | --optfile=* | -of=* | --of=*)
1203 OPTFILE=$ac_optarg ;;
1204
1205 -adoptfile | --adoptfile | -adof | --adof)
1206 ac_prev=AD_OPTFILE ;;
1207 -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1208 AD_OPTFILE=$ac_optarg ;;
1209
1210 -pdepend | --pdepend)
1211 ac_prev=PDEPEND ;;
1212 -pdepend=* | --pdepend=*)
1213 PDEPEND=$ac_optarg ;;
1214
1215 -pdefault | --pdefault)
1216 ac_prev=PDEFAULT ;;
1217 -pdefault=* | --pdefault=*)
1218 PDEFAULT=$ac_optarg ;;
1219
1220 -make | --make | -m | --m)
1221 ac_prev=MAKE ;;
1222 -make=* | --make=* | -m=* | --m=*)
1223 MAKE=$ac_optarg ;;
1224
1225 -bash | --bash)
1226 ac_prev=BASH ;;
1227 -bash=* | --bash=*)
1228 BASH=$ac_optarg ;;
1229
1230 -makedepend | --makedepend | -md | --md)
1231 ac_prev=MAKEDEPEND ;;
1232 -makedepend=* | --makedepend=* | -md=* | --md=*)
1233 MAKEDEPEND=$ac_optarg ;;
1234
1235 -makefile | --makefile | -ma | --ma)
1236 ac_prev=MAKEFILE ;;
1237 -makefile=* | --makefile=* | -ma=* | --ma=*)
1238 MAKEFILE=$ac_optarg ;;
1239
1240 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1241 echo "ERROR: The platform option has been removed. Please specify"
1242 echo " the build options using the \"optfile\" mechanism."
1243 echo
1244 usage
1245 ;;
1246
1247 -rootdir | --rootdir | -rd | --rd)
1248 ac_prev=ROOTDIR ;;
1249 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1250 ROOTDIR=$ac_optarg ;;
1251
1252 -mods | --mods | -mo | --mo)
1253 ac_prev=MODS ;;
1254 -mods=* | --mods=* | -mo=* | --mo=*)
1255 MODS=$ac_optarg ;;
1256
1257 -disable | --disable)
1258 ac_prev=DISABLE ;;
1259 -disable=* | --disable=*)
1260 DISABLE=$ac_optarg ;;
1261
1262 -enable | --enable)
1263 ac_prev=ENABLE ;;
1264 -enable=* | --enable=*)
1265 ENABLE=$ac_optarg ;;
1266
1267 -standarddirs | --standarddirs)
1268 ac_prev=STANDARDDIRS ;;
1269 -standarddirs=* | --standarddirs=*)
1270 STANDARDDIRS=$ac_optarg ;;
1271
1272 # -cpp | --cpp)
1273 # ac_prev=cpp ;;
1274 # -cpp=* | --cpp=*)
1275 # CPP=$ac_optarg ;;
1276
1277 -cc | --cc)
1278 ac_prev=CC ;;
1279 -cc=* | --cc=*)
1280 CC=$ac_optarg ;;
1281
1282 -fortran | --fortran | -fc | --fc)
1283 ac_prev=FC ;;
1284 -fc=* | --fc=*)
1285 FC=$ac_optarg ;;
1286
1287 -fs | --fs)
1288 ac_prev=FS ;;
1289 -fs=* | --fs=*)
1290 FS=$ac_optarg ;;
1291
1292 -fs90 | --fs90)
1293 ac_prev=FS90 ;;
1294 -fs90=* | --fs90=*)
1295 FS90=$ac_optarg ;;
1296
1297 -ieee | --ieee)
1298 IEEE=true ;;
1299 -noieee | --noieee)
1300 IEEE= ;;
1301
1302 -ts | --ts)
1303 TS=true ;;
1304 -papis | --papis)
1305 PAPIS=true ;;
1306 -pcls | --pcls)
1307 PCLS=true ;;
1308 -foolad | --foolad)
1309 FOOLAD=true ;;
1310 -papi | --papi)
1311 PAPI=true ;;
1312 -pcl | --pcl)
1313 PCL=true ;;
1314 -hpmt | --hpmt)
1315 HPMT=true ;;
1316
1317 -gsl | --gsl)
1318 GSL=true ;;
1319
1320 -devel | --devel)
1321 DEVEL=true ;;
1322
1323 -mpi | --mpi)
1324 MPI=true ;;
1325 -mpi=* | --mpi=*)
1326 MPIPATH=$ac_optarg
1327 MPI=true ;;
1328
1329 # -jam | --jam)
1330 # JAM=1 ;;
1331 # -nojam | --nojam)
1332 # JAM=0 ;;
1333
1334 -ds | --ds)
1335 DUMPSTATE=t ;;
1336
1337 -taf_extra | --taf_extra)
1338 ac_prev=TAF_EXTRA ;;
1339 -taf_extra=* | --taf_extra=*)
1340 TAF_EXTRA=$ac_optarg ;;
1341
1342 -tamc_extra | --tamc_extra)
1343 ac_prev=TAMC_EXTRA ;;
1344 -tamc_extra=* | --tamc_extra=*)
1345 TAMC_EXTRA=$ac_optarg ;;
1346
1347 -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1348 IGNORE_TIME="-DIGNORE_TIME" ;;
1349
1350 -es | --es | -embed-source | --embed-source)
1351 EMBED_SRC=t ;;
1352
1353 -*)
1354 echo "Error: unrecognized option: "$ac_option
1355 usage
1356 ;;
1357
1358 *)
1359 echo "Error: unrecognized argument: "$ac_option
1360 usage
1361 ;;
1362
1363 esac
1364
1365 done
1366
1367
1368 if test -f ./.genmakerc ; then
1369 echo
1370 echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1371 echo " file. This file format is no longer supported. For directions on"
1372 echo " how to setup and use the new \"genmake2\" script, please see:"
1373 echo " http://mitgcm.org/devel_HOWTO/"
1374 echo " and send an email to MITgcm-support@mitgcm.org if you need help."
1375 echo "WARNING: ignore \"./.genmakerc\" and continue."
1376 echo
1377 fi
1378
1379 # Find the MITgcm ${ROOTDIR}
1380 if test "x${ROOTDIR}" = x ; then
1381 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1382 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1383 ROOTDIR=".."
1384 else
1385 for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1386 if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1387 ROOTDIR=$d
1388 printf "Warning: ROOTDIR was not specified but there appears to be"
1389 echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1390 break
1391 fi
1392 done
1393 fi
1394 fi
1395 if test "x${ROOTDIR}" = x ; then
1396 echo "Error: Cannot determine ROOTDIR for MITgcm code."
1397 echo " Please specify a ROOTDIR using either an options "
1398 echo " file or a command-line option."
1399 exit 1
1400 fi
1401 if test ! -d ${ROOTDIR} ; then
1402 echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1403 exit 1
1404 fi
1405
1406 # Find the MITgcm ${THISVER}
1407 version_file="${ROOTDIR}/doc/tag-index"
1408 if test -f $version_file ; then
1409 THISVER=`grep '^checkpoint' $version_file | head -1`
1410 #- remove ./BUILD_INFO.h file if older than version_file
1411 if test -f ./BUILD_INFO.h -a ./BUILD_INFO.h -ot $version_file ; then
1412 echo " remove ./BUILD_INFO.h (older than ${version_file})"
1413 rm -f ./BUILD_INFO.h
1414 fi
1415 fi
1416
1417 if test "x$MAKEFILE" = x ; then
1418 MAKEFILE="Makefile"
1419 fi
1420
1421 echo " getting OPTFILE information: "
1422 if test "x${OPTFILE}" = x ; then
1423 if test "x$MITGCM_OF" = x ; then
1424 echo "Warning: no OPTFILE specified so we'll look for possible settings"
1425 printf "\n=== Searching for possible settings for OPTFILE ===\n"
1426 find_possible_configs
1427 else
1428 OPTFILE=$MITGCM_OF
1429 fi
1430 fi
1431 if test "x$OPTFILE" != xNONE ; then
1432 if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1433 echo " using OPTFILE=\"$OPTFILE\""
1434 . "$OPTFILE"
1435 RETVAL=$?
1436 if test "x$RETVAL" != x0 ; then
1437 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1438 echo "--please check that variable syntax is bash-compatible"
1439 exit 1
1440 fi
1441 if test "x$DUMPSTATE" != xf ; then
1442 cp -f $OPTFILE "genmake_optfile"
1443 fi
1444 else
1445 echo "Error: can't read OPTFILE=\"$OPTFILE\""
1446 exit 1
1447 fi
1448 fi
1449
1450 echo " getting AD_OPTFILE information: "
1451 if test "x${AD_OPTFILE}" = x ; then
1452 if test "x$MITGCM_AD_OF" = x ; then
1453 AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1454 else
1455 AD_OPTFILE=$MITGCM_AD_OF
1456 fi
1457 fi
1458 if test "x${AD_OPTFILE}" != xNONE ; then
1459 if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1460 echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1461 . "$AD_OPTFILE"
1462 RETVAL=$?
1463 if test "x$RETVAL" != x0 ; then
1464 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1465 echo "--please check that variable syntax is bash-compatible"
1466 exit 1
1467 fi
1468 if test "x$DUMPSTATE" != xf ; then
1469 cp -f $AD_OPTFILE "genmake_ad_optfile"
1470 fi
1471 else
1472 echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1473 exit 1
1474 fi
1475 fi
1476
1477 #====================================================================
1478 # Set default values if not set by the optfile
1479 #
1480 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1481 # either set defaults or complain and abort!
1482 if test ! "x$BASH" = x ; then
1483 # add a trailing space so that it works within the Makefile syntax (see below)
1484 BASH="$BASH "
1485 fi
1486 if test "x$FC" = x ; then
1487 cat <<EOF 1>&2
1488
1489 Error: no Fortran compiler: please specify using one of the following:
1490 1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1491 2) the "-fc=XXX" command-line option
1492 3) the "./genmake_local" file
1493 EOF
1494 exit 1
1495 fi
1496 if test "x$CC" = x ; then
1497 CC=cc
1498 # cat <<EOF 1>&2
1499 # Error: no C compiler: please specify using one of the following:
1500 # 1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1501 # 2) the "-cc=XXX" command-line option
1502 # 3) the "./genmake_local" file
1503 # EOF
1504 # exit 1
1505 fi
1506 if test "x$LINK" = x ; then
1507 LINK=$FC
1508 fi
1509 if test "x$MAKE" = x ; then
1510 MAKE="make"
1511 fi
1512 if test "x$CPP" = x ; then
1513 CPP=cpp
1514 fi
1515 #EH3 === UGLY ===
1516 # The following is an ugly little hack to check for $CPP in /lib/ and
1517 # it should eventually be replaced with a more general function that
1518 # searches a combo of the user's path and a list of "usual suspects"
1519 # to find the correct location for binaries such as $CPP.
1520 for i in " " "/lib/" ; do
1521 echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1522 done
1523 #EH3 === UGLY ===
1524 echo "#define A a" | $CPP > test_cpp 2>&1
1525 RETVAL=$?
1526 if test "x$RETVAL" != x0 ; then
1527 cat <<EOF 1>&2
1528
1529 Error: C pre-processor "$CPP" failed the test case: please specify using:
1530
1531 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1532 2) the "./genmake_local" file
1533 3) with the CPP environment variable
1534
1535 EOF
1536 exit 1
1537 else
1538 rm -f test_cpp
1539 fi
1540 look_for_makedepend
1541 if test "x$LN" = x ; then
1542 LN="ln -s"
1543 fi
1544 echo "test" > genmake_test_ln
1545 $LN genmake_test_ln genmake_tlink
1546 RETVAL=$?
1547 if test "x$RETVAL" != x0 ; then
1548 cat <<EOF 1>&2
1549
1550 Error: The command "ln -s" failed -- please specify a working soft-link
1551 command in the optfile.
1552
1553 EOF
1554 exit 1
1555 fi
1556 test -L genmake_tlink > /dev/null 2>&1
1557 RETVAL=$?
1558 if test "x$RETVAL" = x0 ; then
1559 HAVE_TEST_L=t
1560 fi
1561 rm -f genmake_test_ln genmake_tlink
1562
1563 # Check for broken *.F/*.f handling and fix if possible
1564 check_for_broken_Ff
1565
1566 if test ! "x$MPI" = x ; then
1567 echo " Turning on MPI cpp macros"
1568 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1569 fi
1570
1571 if test ! "x$TS" = x ; then
1572 echo " Turning on timing per timestep"
1573 if test ! "x$FOOLAD" = x ; then
1574 DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1575 else
1576 DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1577 fi
1578 PACKAGES="$PACKAGES showflops"
1579 fi
1580 if test ! "x$PAPIS" = x ; then
1581 echo " Turning on PAPI flop summary per timestep"
1582 echo " Please make sure PAPIINC, PAPILIB are defined"
1583 if test ! "x$FOOLAD" = x ; then
1584 DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1585 else
1586 DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1587 fi
1588 INCLUDES="$INCLUDES $PAPIINC"
1589 LIBS="$LIBS $PAPILIB"
1590 PACKAGES="$PACKAGES showflops"
1591 fi
1592 if test ! "x$PCLS" = x ; then
1593 echo " Turning on PCL counter summary per timestep"
1594 echo " Please make sure PCLINC, PCLLIB are defined"
1595 if test ! "x$FOOLAD" = x ; then
1596 DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1597 else
1598 DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1599 fi
1600 INCLUDES="$INCLUDES $PCLINC"
1601 LIBS="$LIBS $PCLLIB"
1602 PACKAGES="$PACKAGES showflops"
1603 fi
1604 if test ! "x$PAPI" = x ; then
1605 if test ! "x$PAPIS" = x ; then
1606 echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1607 echo " Sticking with PAPI flop summary per timestep!"
1608 else
1609 echo " Turning on performance analysis with PAPI"
1610 echo " Please make sure PAPIINC, PAPILIB are defined"
1611 DEFINES="$DEFINES -DUSE_PAPI"
1612 INCLUDES="$INCLUDES $PAPIINC"
1613 LIBS="$LIBS $PAPILIB"
1614 fi
1615 fi
1616 if test ! "x$PCL" = x ; then
1617 if test ! "x$PCLS" = x ; then
1618 echo " PCL performance analysis and flop summary per timestep cannot co-exist!"
1619 echo " Sticking with PCL flop summary per timestep!"
1620 else
1621 echo " Turning on performance analysis with PCL"
1622 echo " Please make sure PCLINC, PCLLIB are defined"
1623 DEFINES="$DEFINES -DUSE_PCL"
1624 INCLUDES="$INCLUDES $PCLINC"
1625 LIBS="$LIBS $PCLLIB"
1626 fi
1627 fi
1628 if test ! "x$HPMT" = x ; then
1629 if test ! "x$PAPI" = x ; then
1630 echo " PAPI and the HPM Toolkit cannot co-exist!"
1631 echo " Sticking with PAPI!"
1632 else if test ! "x$PCL" = x ; then
1633 echo " PCL and the HPM Toolkit cannot co-exist!"
1634 echo " Sticking with PCL!"
1635 else
1636 echo " Turning on performance analysis with the HPM Toolkit"
1637 echo " Please make sure HPMTINC, HPMTLIB are defined"
1638 DEFINES="$DEFINES -DUSE_LIBHPM"
1639 INCLUDES="$INCLUDES $HPMTINC"
1640 LIBS="$LIBS $HPMTLIB"
1641 fi
1642 fi
1643 fi
1644 if test ! "x$GSL" = x ; then
1645 echo " Turning on use of GSL to control floating point calculations"
1646 echo " Please make sure GSLINC, GSLLIB are defined"
1647 DEFINES="$DEFINES -DUSE_GSL_IEEE"
1648 INCLUDES="$INCLUDES $GSLINC"
1649 LIBS="$LIBS $GSLLIB"
1650 fi
1651 #- if USE_EXTENDED_SRC is set, add EXTENDED_SRC_FLAG to FFLAGS :
1652 if test ! "x$USE_EXTENDED_SRC" = x ; then
1653 FFLAGS="$FFLAGS $EXTENDED_SRC_FLAG"
1654 F90FIXEDFORMAT="$F90FIXEDFORMAT $EXTENDED_SRC_FLAG"
1655 fi
1656
1657 printf "\n=== Checking system libraries ===\n"
1658 printf " Do we have the system() command using $FC... "
1659 cat > genmake_tcomp.$FS <<EOF
1660 program hello
1661 call system('echo hi')
1662 end
1663 EOF
1664 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1665 RETVAL=$?
1666 if test "x$RETVAL" = x0 ; then
1667 HAVE_SYSTEM=t
1668 DEFINES="$DEFINES -DHAVE_SYSTEM"
1669 echo "yes"
1670 else
1671 HAVE_SYSTEM=
1672 echo "no"
1673 fi
1674 rm -f genmake_tcomp*
1675
1676 printf " Do we have the fdate() command using $FC... "
1677 cat > genmake_tcomp.$FS <<EOF
1678 program hello
1679 CHARACTER*(128) string
1680 string = ' '
1681 call fdate( string )
1682 print *, string
1683 end
1684 EOF
1685 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1686 RETVAL=$?
1687 if test "x$RETVAL" = x0 ; then
1688 HAVE_FDATE=t
1689 DEFINES="$DEFINES -DHAVE_FDATE"
1690 echo "yes"
1691 else
1692 HAVE_FDATE=
1693 echo "no"
1694 fi
1695 rm -f genmake_tcomp*
1696
1697 printf " Do we have the etime() command using $FC... "
1698 cat > genmake_tcomp.$FS <<EOF
1699 program hello
1700 REAL*4 ACTUAL, TARRAY(2)
1701 EXTERNAL ETIME
1702 REAL*4 ETIME
1703 actual = etime( tarray )
1704 print *, tarray
1705 end
1706 EOF
1707 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1708 RETVAL=$?
1709 if test "x$RETVAL" = x0 ; then
1710 HAVE_ETIME=t
1711 DEFINES="$DEFINES -DHAVE_ETIME"
1712 echo "yes"
1713 else
1714 HAVE_ETIME=
1715 echo "no"
1716 fi
1717 rm -f genmake_tcomp*
1718
1719 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1720 check_HAVE_CLOC
1721 if test "x$HAVE_CLOC" != x ; then
1722 echo "yes"
1723 else
1724 echo "no"
1725 if test "x$EMBED_SRC" = xt ; then
1726 echo " WARNING: you requested file embedding but it has"
1727 echo " been disabled since C code cannot be called"
1728 EMBED_SRC=
1729 fi
1730 fi
1731 rm -f genmake_t*
1732
1733 printf " Can we unlimit the stack size using $FC... "
1734 check_HAVE_SETRLSTK
1735 if test "x$HAVE_SETRLSTK" = xt ; then
1736 echo "yes"
1737 else
1738 echo "no"
1739 fi
1740 rm -f genmake_t*
1741
1742 printf " Can we register a signal handler using $FC... "
1743 check_HAVE_SIGREG
1744 if test "x$HAVE_SIGREG" = xt ; then
1745 echo "yes"
1746 else
1747 echo "no"
1748 fi
1749 rm -f genmake_t*
1750
1751 printf " Can we use stat() through C calls... "
1752 check_HAVE_STAT
1753 if test "x$HAVE_STAT" != x ; then
1754 echo "yes"
1755 else
1756 echo "no"
1757 fi
1758 rm -f genmake_t*
1759
1760 printf " Can we create NetCDF-enabled binaries... "
1761 check_netcdf_libs
1762 if test "x$HAVE_NETCDF" != x ; then
1763 echo "yes"
1764 else
1765 echo "no"
1766 fi
1767 DEFINES="$DEFINES $IGNORE_TIME"
1768
1769 if test "x$EMBED_SRC" = xt ; then
1770 build_embed_encode
1771 fi
1772 if test "x$EMBED_SRC" = xt ; then
1773 ENABLE="$ENABLE embed_files"
1774 fi
1775
1776
1777 printf "\n=== Setting defaults ===\n"
1778 printf " Adding MODS directories: "
1779 for d in $MODS ; do
1780 if test ! -d $d ; then
1781 echo
1782 echo "Error: MODS directory \"$d\" not found!"
1783 exit 1
1784 else
1785 printf " $d"
1786 SOURCEDIRS="$SOURCEDIRS $d"
1787 INCLUDEDIRS="$INCLUDEDIRS $d"
1788 fi
1789 done
1790 echo
1791
1792 if test "x${PLATFORM}" = x ; then
1793 PLATFORM=$p_PLATFORM
1794 fi
1795
1796 if test "x${EXEDIR}" = x ; then
1797 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1798 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1799 EXEDIR=../exe
1800 else
1801 EXEDIR=.
1802 fi
1803 fi
1804 if test ! -d ${EXEDIR} ; then
1805 echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1806 exit 1
1807 fi
1808
1809 if test "x${TOOLSDIR}" = x ; then
1810 TOOLSDIR="$ROOTDIR/tools"
1811 fi
1812 if test ! -d ${TOOLSDIR} ; then
1813 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1814 exit 1
1815 fi
1816 if test "x$S64" = x ; then
1817 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1818 RETVAL=$?
1819 if test "x${RETVAL}" = x0 ; then
1820 S64='$(TOOLSDIR)/set64bitConst.sh'
1821 else
1822 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1823 RETVAL=$?
1824 if test "x${RETVAL}" = x0 ; then
1825 S64='$(TOOLSDIR)/set64bitConst.csh'
1826 else
1827 cat <<EOF
1828
1829 ERROR: neither of the two default scripts:
1830
1831 ${TOOLSDIR}/set64bitConst.sh
1832 ${TOOLSDIR}/set64bitConst.csh
1833
1834 are working so please check paths or specify (with \$S64) a
1835 working version of this script.
1836
1837 EOF
1838 exit 1
1839 fi
1840 fi
1841 fi
1842 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1843
1844 EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1845
1846 # We have a special set of source files in eesupp/src which are
1847 # generated from some template source files. We'll make them first so
1848 # they appear as regular source code
1849 if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1850 echo " Making source files in eesupp from templates"
1851 ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
1852 RETVAL=$?
1853 if test "x${RETVAL}" = x0 ; then
1854 rm -f make_eesupp.errors
1855 else
1856 echo "Error: problem encountered while building source files in eesupp:"
1857 cat make_eesupp.errors 1>&2
1858 exit 1
1859 fi
1860 fi
1861
1862 #same for pkg/exch2 and pkg/regrid
1863 for pdir in exch2 regrid ; do
1864 if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1865 echo " Making source files in pkg/${pdir} from templates"
1866 ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1
1867 RETVAL=$?
1868 if test "x${RETVAL}" = x0 ; then
1869 rm -f make_${pdir}.errors
1870 else
1871 echo "Error: problem encountered while building source files in pkg/${pdir}:"
1872 cat make_${pdir}.errors 1>&2
1873 exit 1
1874 fi
1875 fi
1876 done
1877
1878 printf "\n=== Determining package settings ===\n"
1879 if test "x${PDEPEND}" = x ; then
1880 tmp=$ROOTDIR"/pkg/pkg_depend"
1881 if test -r $tmp ; then
1882 PDEPEND=$tmp
1883 else
1884 echo "Warning: No package dependency information was specified."
1885 echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1886 fi
1887 else
1888 if test ! -r ${PDEPEND} ; then
1889 echo "Error: can't read package dependency info from PDEPEND=\"$PDEPEND\""
1890 exit 1
1891 fi
1892 fi
1893 echo " getting package dependency info from $PDEPEND"
1894 # Strip the comments and then convert the dependency file into
1895 # two arrays: PNAME, DNAME
1896 cat $PDEPEND | sed -e 's/#.*$//g' \
1897 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
1898 > ./.pd_tmp
1899 RETVAL=$?
1900 if test ! "x${RETVAL}" = x0 ; then
1901 echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
1902 exit 1
1903 fi
1904 . ./.pd_tmp
1905 rm -f ./.pd_tmp
1906
1907 # Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups"
1908 # file should eventually be added so that, for convenience, one can
1909 # specify groups of packages using names like "ocean" and "atmosphere".
1910 echo " checking default package list: "
1911 if test "x${PDEFAULT}" = x ; then
1912 for i in "." $MODS ; do
1913 if test -r $i"/packages.conf" ; then
1914 PDEFAULT=$i"/packages.conf"
1915 break
1916 fi
1917 done
1918 fi
1919 if test "x${PDEFAULT}" = x ; then
1920 PDEFAULT="$ROOTDIR/pkg/pkg_default"
1921 fi
1922 if test "x${PDEFAULT}" = xNONE ; then
1923 echo " default packages file disabled"
1924 else
1925 if test ! -r $PDEFAULT ; then
1926 echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\""
1927 else
1928 echo " using PDEFAULT=\"$PDEFAULT\""
1929 # Strip the comments and add all the names
1930 def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1931 RETVAL=$?
1932 if test "x${RETVAL}" != x0 ; then
1933 printf "Error: can't parse default package list "
1934 echo "-- please check PDEFAULT=\"$PDEFAULT\""
1935 exit 1
1936 fi
1937 for i in $def ; do
1938 PACKAGES="$PACKAGES $i"
1939 done
1940 echo " before group expansion packages are: $PACKAGES"
1941 RET=1
1942 while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1943 echo " after group expansion packages are: $PACKAGES"
1944 fi
1945 fi
1946
1947 echo " applying DISABLE settings"
1948 for i in $PACKAGES ; do
1949 echo $i >> ./.tmp_pack
1950 done
1951 for i in `grep "-" ./.tmp_pack` ; do
1952 j=`echo $i | sed 's/[-]//'`
1953 DISABLE="$DISABLE $j"
1954 done
1955 pack=
1956 for p in $PACKAGES ; do
1957 addit="t"
1958 for d in $DISABLE ; do
1959 if test "x$p" = "x$d" ; then
1960 addit="f"
1961 fi
1962 done
1963 if test "x$addit" = xt ; then
1964 pack="$pack $p"
1965 fi
1966 done
1967 PACKAGES="$pack"
1968 echo " applying ENABLE settings"
1969 echo "" > ./.tmp_pack
1970 PACKAGES="$PACKAGES $ENABLE"
1971 # Test if each explicitly referenced package exists
1972 for i in $PACKAGES ; do
1973 j=`echo $i | sed 's/[-+]//'`
1974 if test ! -d "$ROOTDIR/pkg/$j" ; then
1975 echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1976 exit 1
1977 fi
1978 echo $i >> ./.tmp_pack
1979 done
1980 PACKAGES=
1981 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1982 PACKAGES="$PACKAGES $i"
1983 done
1984 rm -f ./.tmp_pack
1985 echo " packages are: $PACKAGES"
1986
1987 # Check for package MNC: if NetCDF is available, then build the MNC
1988 # template files ; otherwise, delete mnc from the list of packages.
1989 echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1990 RETVAL=$?
1991 if test "x$RETVAL" = x0 ; then
1992 if test "x$HAVE_NETCDF" != xt ; then
1993 cat <<EOF
1994
1995 *********************************************************************
1996 WARNING: the "mnc" package was enabled but tests failed to compile
1997 NetCDF applications. Please check that:
1998
1999 1) NetCDF is correctly installed for this compiler and
2000 2) the LIBS variable (within the "optfile") specifies the correct
2001 NetCDF library to link against.
2002
2003 Due to this failure, the "mnc" package is now DISABLED.
2004 *********************************************************************
2005
2006 EOF
2007 PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
2008 DISABLE="$DISABLE mnc"
2009 else
2010 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
2011 RETVAL=$?
2012 if test "x${RETVAL}" = x0 ; then
2013 rm -f make_mnc.errors
2014 else
2015 echo "Error: problem encountered while building source files in pkg/mnc:"
2016 cat make_mnc.errors 1>&2
2017 exit 1
2018 fi
2019 fi
2020 fi
2021
2022 # Check for package PROFILES: if NetCDF is not available,
2023 # then delete profiles from the list of available packages.
2024 echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1
2025 RETVAL=$?
2026 if test "x$RETVAL" = x0 ; then
2027 if test "x$HAVE_NETCDF" != xt ; then
2028 cat <<EOF
2029
2030 *********************************************************************
2031 WARNING: the "profiles" package was enabled but tests failed to
2032 compile NetCDF applications. Please check that:
2033
2034 1) NetCDF is correctly installed for this compiler and
2035 2) the LIBS variable (within the "optfile") specifies the correct
2036 NetCDF library to link against.
2037
2038 Due to this failure, the "profiles" package is now DISABLED.
2039 *********************************************************************
2040
2041 EOF
2042 PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2043 DISABLE="$DISABLE profiles"
2044 fi
2045 fi
2046
2047 echo " applying package dependency rules"
2048 ck=
2049 while test "x$ck" != xtt ; do
2050 i=0
2051 # rtot=${#PNAME[@]}
2052 rtot=$nname
2053 while test $i -le $rtot ; do
2054
2055 # Is $pname in the current $PACKAGES list?
2056 # pname=${PNAME[$i]}
2057 tmp="pname=\"\$PNAME_$i\""
2058 eval $tmp
2059 pin="f"
2060 for p in $PACKAGES ; do
2061 if test "x$p" = "x$pname" ; then
2062 pin="t"
2063 fi
2064 done
2065
2066 # Is the DNAME entry a (+) or (-) rule ?
2067 tmp="dname=\"\$DNAME_$i\""
2068 eval $tmp
2069 plus="-"
2070 echo $dname | grep '^+' > /dev/null 2>&1
2071 RETVAL=$?
2072 if test "x$RETVAL" = x0 ; then
2073 plus="+"
2074 fi
2075
2076 # Is $dname in the current $PACKAGES list?
2077 dname=`echo $dname | sed -e 's/^[+-]//'`
2078 din="f"
2079 for p in $PACKAGES ; do
2080 if test "x$p" = "x$dname" ; then
2081 din="t"
2082 fi
2083 done
2084
2085 # Do we need to add $dname according to the dependency rules?
2086 if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
2087 #echo " " $pname ": need to add :" $dname
2088 in_dis="f"
2089 for dis in $DISABLE ; do
2090 if test "x$dis" = "x$dname" ; then
2091 in_dis="t"
2092 fi
2093 done
2094 if test "x$in_dis" = xt ; then
2095 echo "Error: can't satisfy package dependencies:"
2096 echo " \"$dname\" is required by the dependency rules"
2097 echo " but is disallowed by the DISABLE settings"
2098 exit 1
2099 else
2100 PACKAGES="$PACKAGES $dname"
2101 ck=
2102 fi
2103 fi
2104
2105 # Do we need to get rid of $dname according to the dependency rules?
2106 if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
2107 echo "Error: can't satisfy package dependencies:"
2108 echo " \"$pname\" was requested but is disallowed by"
2109 echo " the dependency rules for \"$dname\""
2110 exit 1
2111 fi
2112 i=`echo "$i + 1" | bc -l`
2113 #i=$(( $i + 1 ))
2114 done
2115 ck=$ck"t"
2116 done
2117 echo " packages are: $PACKAGES"
2118 for i in $PACKAGES ; do
2119 adr="$ROOTDIR/pkg/$i"
2120 if test -d $adr ; then
2121 SOURCEDIRS="$SOURCEDIRS $adr"
2122 INCLUDEDIRS="$INCLUDEDIRS $adr"
2123 if test "x$i" = xautodiff ; then
2124 AUTODIFF_PKG_USED=t
2125 fi
2126 else
2127 echo "Error: the directory \"$adr\" for package $i doesn't exist"
2128 exit 1
2129 fi
2130 done
2131
2132 # Create a list of #define and #undef to enable/disable packages
2133 PACKAGES_DOT_H=PACKAGES_CONFIG.h
2134 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2135 # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2136 # file would eventually be split up so that all package-related #define
2137 # statements could be separated and handled only by genmake.
2138 names=`ls -1 "$ROOTDIR/pkg"`
2139 all_pack=
2140 DISABLED_PACKAGES=
2141 for n in $names ; do
2142 if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2143 has_pack="f"
2144 for pack in $PACKAGES ; do
2145 if test "x$pack" = "x$n" ; then
2146 has_pack="t"
2147 break
2148 fi
2149 done
2150 if test "x$has_pack" = xf ; then
2151 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2152 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2153 fi
2154 fi
2155 done
2156 ENABLED_PACKAGES=
2157 for i in $PACKAGES ; do
2158 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2159 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2160 #eh3 DEFINES="$DEFINES -D$def"
2161
2162 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2163 case $i in
2164 aim_v23)
2165 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2166 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2167 ;;
2168 esac
2169 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2170
2171 done
2172
2173 echo " Adding STANDARDDIRS"
2174 BUILDDIR=${BUILDDIR:-.}
2175 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
2176 STANDARDDIRS="eesupp model"
2177 fi
2178 if test "x$STANDARDDIRS" != x ; then
2179 for d in $STANDARDDIRS ; do
2180 adr="$ROOTDIR/$d/src"
2181 if test ! -d $adr ; then
2182 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2183 echo " is correct and that you correctly specified the STANDARDDIRS option"
2184 exit 1
2185 else
2186 SOURCEDIRS="$SOURCEDIRS $adr"
2187 fi
2188 adr="$ROOTDIR/$d/inc"
2189 if test ! -d $adr ; then
2190 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2191 echo " is correct and that you correctly specified the STANDARDDIRS option"
2192 exit 1
2193 else
2194 INCLUDEDIRS="$INCLUDEDIRS $adr"
2195 fi
2196 done
2197 fi
2198
2199 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2200 echo " of \"#define \"-type statements that are no longer allowed:"
2201 CPP_OPTIONS=
2202 CPP_EEOPTIONS=
2203 spaths=". $INCLUDEDIRS"
2204 names=`ls -1 "$ROOTDIR/pkg"`
2205 for i in $spaths ; do
2206 try="$i/CPP_OPTIONS.h"
2207 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2208 echo " found CPP_OPTIONS=\"$try\""
2209 CPP_OPTIONS="$try"
2210 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2211 for n in $names ; do
2212 test_for_package_in_cpp_options $CPP_OPTIONS $n
2213 done
2214 fi
2215 try="$i/CPP_EEOPTIONS.h"
2216 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2217 echo " found CPP_EEOPTIONS=\"$try\""
2218 # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2219 #**** not yet enabled ****
2220 # test_for_mpi_in_cpp_eeoptions $try
2221 #**** not yet enabled ****
2222 CPP_EEOPTIONS="$try"
2223 fi
2224 done
2225 if test "x$CPP_OPTIONS" = x ; then
2226 echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2227 exit 1
2228 fi
2229
2230 # Here, we build the list of files to be "run through" the adjoint
2231 # compiler.
2232 if test -f ./adSrcFiles.tmp ; then
2233 rm -f ./adSrcFiles.tmp
2234 fi
2235 echo " Creating the list of files for the adjoint compiler."
2236 for i in $SOURCEDIRS ; do
2237 list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2238 for j in $list_files ; do
2239 cat $i/$j >> adSrcFiles.tmp
2240 done
2241 done
2242 if test ! "x"$FS = "x.f" ; then
2243 cat adSrcFiles.tmp | sed -e "s/\.f/.$FS/g" > adSrcFiles.tmp_f
2244 mv -f adSrcFiles.tmp_f adSrcFiles.tmp
2245 fi
2246
2247 echo
2248 echo "=== Creating the Makefile ==="
2249 echo " setting INCLUDES"
2250 for i in $INCLUDEDIRS ; do
2251 if test ! -d $i ; then
2252 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2253 fi
2254 done
2255
2256 if test ! "x$DIVA" = x ; then
2257 echo " Creating the pseudo-MPI include directory"
2258 INCLUDES="-I./mpi_headers $INCLUDES"
2259 rm -rf ./mpi_headers
2260 mkdir -p ./mpi_headers
2261
2262 if test "x$MPIINCLUDEDIR" = x ; then
2263 if test "x$MPIHOME" = x ; then
2264 MPIHOME='/usr'
2265 fi
2266 MPIINCLUDEDIR='$MPIHOME/include'
2267 fi
2268
2269 if test -r $MPIINCLUDEDIR/mpif.h ; then
2270 for i in $MPI_HEADER_FILES; do
2271 cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2272 done
2273
2274 perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2275 else
2276 echo " We cannot create a copy of mpif.h!"
2277 # exit -1
2278 fi
2279 fi
2280
2281 echo " Determining the list of source and include files"
2282 rm -rf .links.tmp
2283 mkdir .links.tmp
2284 touch .links.tmp/foo
2285 if test ! -r ".links.tmp/foo" ; then
2286 echo
2287 echo "ERROR : something is wrong with your directory permissions or"
2288 echo " your user file-creation mask (\"umask\") since creating a"
2289 echo " sub-dir, touch-ing a file within it, and then reading it is"
2290 echo " not working. Please try setting your umask to something"
2291 echo " sane such as:"
2292 echo
2293 echo " umask 0002"
2294 echo
2295 echo " and please verify that you have the proper permissions for"
2296 echo " creating sub-directories and then reading files created"
2297 echo " within them."
2298 echo
2299 exit 1
2300 fi
2301 rm -f .links.tmp/foo
2302
2303 if test "x$OPENAD" != x ; then
2304 OAD_DONT_COMPILE="/dev/null"
2305 OAD_DONT_TRANSFORM="/dev/null"
2306 OAD_KEEP_ORIGINAL="/dev/null"
2307 OAD_CB2M_FILES="/dev/null"
2308 echo " looking for dontCompile file: "
2309 for i in "." $MODS ; do
2310 if test -r $i"/dontCompile" ; then
2311 OAD_DONT_COMPILE=$i"/dontCompile"
2312 echo " found $OAD_DONT_COMPILE"
2313 break
2314 fi
2315 done
2316 echo " looking for dontTransform file: "
2317 for i in "." $MODS ; do
2318 if test -r $i"/dontTransform" ; then
2319 OAD_DONT_TRANSFORM=$i"/dontTransform"
2320 echo " found $OAD_DONT_TRANSFORM"
2321 break
2322 fi
2323 done
2324 echo " looking for keepOriginal file: "
2325 for i in "." $MODS ; do
2326 if test -r $i"/keepOriginal" ; then
2327 OAD_KEEP_ORIGINAL=$i"/keepOriginal"
2328 echo " found $OAD_KEEP_ORIGINAL"
2329 break
2330 fi
2331 done
2332 echo " looking for cb2mFiles: "
2333 for i in "." $MODS ; do
2334 if test -r $i"/cb2mFiles" ; then
2335 OAD_CB2M_FILES=$i"/cb2mFiles"
2336 echo " found $OAD_CB2M_FILES"
2337 break
2338 fi
2339 done
2340 echo " OpenAD exceptions: "
2341 fi
2342
2343 echo "# This section creates symbolic links" > srclinks.tmp
2344 echo "" >> srclinks.tmp
2345 printf 'F77_SRC_FILES = ' > F77srclist.tmp
2346 printf 'NON_AD_F77_SRC_FILES = ' > nonADF77srclist.tmp
2347 printf 'C_SRC_FILES = ' > csrclist.tmp
2348 printf 'F90_SRC_FILES = ' > F90srclist.tmp
2349 printf 'H_SRC_FILES = ' > hsrclist.tmp
2350 printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp
2351 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2352 for d in $alldirs ; do
2353 deplist=
2354 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2355 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2356 if test "x$OPENAD" != x ; then
2357 sfiles=`( echo $sfiles | grep -v _cb2m\. )`
2358 fi
2359 for sf in $sfiles ; do
2360 if test ! -r ".links.tmp/$sf" ; then
2361 if test -f "$d/$sf" ; then
2362 ignore_f=f
2363 case $d/$sf in
2364 ./$PACKAGES_DOT_H)
2365 ignore_f=t
2366 ;;
2367 ./AD_CONFIG.h)
2368 ignore_f=t
2369 ;;
2370 ./FC_NAMEMANGLE.h)
2371 ignore_f=t
2372 ;;
2373 ./BUILD_INFO.h)
2374 ignore_f=t
2375 ;;
2376 ./EMBEDDED_FILES.h)
2377 ignore_f=t
2378 ;;
2379 *)
2380 # For the local directory *ONLY*,
2381 # ignore all soft-links
2382 if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2383 ignore_f=t
2384 else
2385 touch .links.tmp/$sf
2386 deplist="$deplist $sf"
2387 fi
2388 ;;
2389 esac
2390 if test "x$ignore_f" = xf ; then
2391 extn=`echo $sf | $AWK -F. '{print $NF}'`
2392 case $extn in
2393 F)
2394 echo " \\" >> F77srclist.tmp
2395 printf " $sf" >> F77srclist.tmp
2396 if test "x$OPENAD" != x ; then
2397 basename=${sf%%.F}
2398 isAD=`egrep ^$basename.f'[ ]*' adSrcFiles.tmp`
2399 if test -z "$isAD" ; then
2400 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE}`
2401 if test -z "$toBeIgnored" ; then
2402 echo " \\" >> nonADF77srclist.tmp
2403 printf " $sf" >> nonADF77srclist.tmp
2404 else
2405 echo " not to be compiled : $sf"
2406 fi
2407 else # file is initially listed as an AD file we want to exclude it
2408 # or we want to retain the untransformed version
2409 notToBeTransformed=`egrep ^$basename'[ ]*' ${OAD_DONT_TRANSFORM}`
2410 untransformedVersionToBeKept=`egrep ^$basename'[ ]*' ${OAD_KEEP_ORIGINAL}`
2411 if test -n "$notToBeTransformed"; then
2412 echo " not to be transformed: $sf"
2413 fi
2414 if test -n "$untransformedVersionToBeKept" ; then
2415 echo " original to be kept : $sf"
2416 fi
2417 if test -n "$notToBeTransformed" -o -n "$untransformedVersionToBeKept" ; then
2418 echo " \\" >> nonADF77srclist.tmp
2419 printf " $sf" >> nonADF77srclist.tmp
2420 fi
2421 fi
2422 fi
2423 ;;
2424 F90)
2425 echo " \\" >> F90srclist.tmp
2426 printf " $sf" >> F90srclist.tmp
2427 ;;
2428 c)
2429 echo " \\" >> csrclist.tmp
2430 printf " $sf" >> csrclist.tmp
2431 ;;
2432 h)
2433 echo " \\" >> hsrclist.tmp
2434 printf " $sf" >> hsrclist.tmp
2435 ;;
2436 flow)
2437 echo " \\" >> ad_flow_files.tmp
2438 printf " $sf" >> ad_flow_files.tmp
2439 ;;
2440 esac
2441 fi
2442 fi
2443 fi
2444 done
2445 if test "x$deplist" != x ; then
2446 if test "$d" != "." ; then
2447 echo "" >> srclinks.tmp
2448 echo "# These files are linked from $d" >> srclinks.tmp
2449 echo "$deplist :" >> srclinks.tmp
2450 # We need to make sure that the link isn't already there.
2451 # This may happen when make thinks that a header file has to be "remade"
2452 # because a module it depends on has changed. In this case we do nothing.
2453 printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp
2454 fi
2455 fi
2456 done
2457 rm -rf .links.tmp
2458 echo "" >> F77srclist.tmp
2459 echo "" >> nonADF77srclist.tmp
2460 echo "" >> csrclist.tmp
2461 echo "" >> F90srclist.tmp
2462 echo "" >> hsrclist.tmp
2463 echo "" >> ad_flow_files.tmp
2464
2465 if test -f $MAKEFILE ; then
2466 mv -f $MAKEFILE "$MAKEFILE.bak"
2467 fi
2468 echo " Writing makefile: $MAKEFILE"
2469 echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2470 echo "# $MACHINE" >> $MAKEFILE
2471 echo "# This makefile was generated automatically on" >> $MAKEFILE
2472 echo "# $THISDATE" >> $MAKEFILE
2473 echo "# by the command:" >> $MAKEFILE
2474 echo "# $0 $G2ARGS" >> $MAKEFILE
2475 echo "# executed by:" >> $MAKEFILE
2476 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2477
2478 EXE_AD=$EXECUTABLE"_ad"
2479 EXE_FTL=$EXECUTABLE"_ftl"
2480 EXE_SVD=$EXECUTABLE"_svd"
2481
2482 cat >>$MAKEFILE <<EOF
2483 #
2484 # OPTFILE="$OPTFILE"
2485 #
2486 # BUILDDIR : Directory where object files are written
2487 # SOURCEDIRS : Directories containing the source (.F) files
2488 # INCLUDEDIRS : Directories containing the header-source (.h) files
2489 # EXEDIR : Directory where executable that is generated is written
2490 # EXECUTABLE : Full path of executable binary
2491 #
2492 # CPP : C-preprocessor command
2493 # INCLUDES : Directories searched for header files
2494 # DEFINES : Macro definitions for CPP
2495 # MAKEDEPEND : Dependency generator
2496 # KPP : Special preprocessor command (specific to platform)
2497 # KFLAGS : Flags for KPP
2498 # FC : Fortran compiler command
2499 # FFLAGS : Configuration/debugging options for FC
2500 # FOPTIM : Optimization options for FC
2501 # LINK : Command for link editor program
2502 # LIBS : Library flags /or/ additional optimization/debugging flags
2503
2504 ROOTDIR = ${ROOTDIR}
2505 BUILDDIR = ${BUILDDIR}
2506 SOURCEDIRS = ${SOURCEDIRS}
2507 INCLUDEDIRS = ${INCLUDEDIRS}
2508 EXEDIR = ${EXEDIR}
2509 EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2510 TOOLSDIR = ${TOOLSDIR}
2511
2512 #eh3 new defines for the adjoint work
2513 AUTODIFF = ${ROOTDIR}/pkg/autodiff
2514 EXE_AD = ${EXE_AD}
2515 EXE_FTL = ${EXE_FTL}
2516 EXE_SVD = ${EXE_SVD}
2517
2518 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2519 DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2520
2521 # These files are created by Makefile
2522 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2523 EOF
2524
2525 if test "x$EMBED_SRC" = xt ; then
2526 echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2527 else
2528 echo "EMBEDDED_FILES = " >>$MAKEFILE
2529 fi
2530
2531 # Note: figure out some way to add Hyades JAM libraries here
2532 cat >>$MAKEFILE <<EOF
2533 # Unix ln (link)
2534 LN = ${LN}
2535 # C preprocessor
2536 CPP = cat \$< | ${S64} | ${CPP}
2537 # Dependency generator
2538 MAKEDEPEND = ${MAKEDEPEND}
2539 # Special preprocessor (KAP on DECs, FPP on Crays)
2540 KPP = ${KPP}
2541 # Fortran compiler
2542 FC = ${FC}
2543 # Fortran compiler
2544 F90C = ${F90C}
2545 # C compiler
2546 CC = ${CC}
2547 # Link editor
2548 LINK = ${LINK} ${LDADD}
2549
2550 # Defines for CPP
2551 DEFINES = ${DEFINES}
2552 # Includes for CPP
2553 INCLUDES = ${INCLUDES}
2554 # Flags for KPP
2555 KFLAGS1 = ${KFLAGS1}
2556 KFLAGS2 = ${KFLAGS2}
2557 # Optim./debug for FC
2558 FFLAGS = ${FFLAGS} ${FEXTRAFLAGS}
2559 FOPTIM = ${FOPTIM}
2560 # Optim./debug for FC
2561 F90FLAGS = ${F90FLAGS}
2562 F90OPTIM = ${F90OPTIM}
2563 F90FIXEDFORMAT = ${F90FIXEDFORMAT}
2564 # Flags for CC
2565 CFLAGS = ${CFLAGS}
2566 # Files that should not be optimized
2567 NOOPTFILES = ${NOOPTFILES}
2568 NOOPTFLAGS = ${NOOPTFLAGS}
2569 # Flags and libraries needed for linking
2570 LIBS = ${LIBS}
2571 # Name of the Mekfile
2572 MAKEFILE=${MAKEFILE}
2573
2574 EOF
2575
2576 cat F77srclist.tmp >> $MAKEFILE
2577 cat nonADF77srclist.tmp >> $MAKEFILE
2578 cat csrclist.tmp >> $MAKEFILE
2579 cat F90srclist.tmp >> $MAKEFILE
2580 cat hsrclist.tmp >> $MAKEFILE
2581 cat ad_flow_files.tmp >> $MAKEFILE
2582
2583 rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp
2584
2585 echo >> $MAKEFILE
2586
2587 # add definitions for preprocessed sources
2588 # and note that not all systems allow case sensitive extensions
2589 # hence the $FS and $FS90 here.
2590 # for fixed format f90 files we use ff90 or FF90 resp
2591 # but these are not expected to be the original source files
2592
2593 echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')' >> $MAKEFILE
2594 echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE
2595 echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE
2596 echo 'FLOFILES = $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE
2597 echo >> $MAKEFILE
2598 echo '.SUFFIXES:' >> $MAKEFILE
2599 echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE
2600
2601 cat >>$MAKEFILE <<EOF
2602
2603 all: \$(EXECUTABLE)
2604 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2605 @echo Creating \$@ ...
2606 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2607 depend:
2608 @make links
2609 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2610 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2611 -rm -f makedepend.out
2612
2613 lib: libmitgcmuv.a
2614
2615 libmitgcmuv.a: \$(OBJFILES)
2616 ar rcv libmitgcmuv.a \$(OBJFILES)
2617 ar d libmitgcmuv.a main.o
2618
2619 links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES)
2620
2621 small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
2622
2623 output.txt: \$(EXECUTABLE)
2624 @printf 'running ... '
2625 @\$(EXECUTABLE) > \$@
2626
2627 clean:
2628 -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2629 -rm -rf *.o
2630 -rm -rf *.$FS *.flowdir
2631 -rm -rf *.f$FS90 *_mod.h *_mod.F90 *.FF90 *.mod-whirl ad_input*
2632 -rm -rf temp.sed
2633 Clean:
2634 @make clean
2635 @make cleanlinks
2636 -rm -f \$(SPECIAL_FILES)
2637 -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log f90mkdepend.log *.bak
2638 -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
2639 CLEAN:
2640 @make Clean
2641 -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2642 -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2643 -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2644 -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
2645 -rm -f *_MIT_CE_000.opt0000 costfunction*0000
2646 -rm -rf mnc_test_*
2647
2648 #eh3 Makefile: makefile
2649 makefile:
2650 $THIS_SCRIPT $G2ARGS
2651 cleanlinks:
2652 -find . -type l -exec rm {} \;
2653
2654 # Special targets (SPECIAL_FILES) which are created by make
2655 ${PACKAGES_DOT_H}:
2656 @echo Creating \$@ ...
2657 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2658 AD_CONFIG.h:
2659 @echo Creating \$@ ...
2660 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2661 FC_NAMEMANGLE.h:
2662 @echo Creating \$@ ...
2663 echo "$FC_NAMEMANGLE" > \$@
2664
2665 BUILD_INFO.h:
2666 @echo Creating \$@ ...
2667 EOF
2668
2669 test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2670 test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2671 test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2672 test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2673
2674 if test "x$EMBED_SRC" = xt ; then
2675 cat >>$MAKEFILE <<EOF
2676
2677 decode_files.o : EMBEDDED_FILES.h
2678
2679 ## \$(F77_PP_SRC_FILES)
2680 all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2681 @echo Creating \$@ ...
2682 -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
2683 -rm -f all_fF.tar.gz
2684 -gzip all_fF.tar
2685
2686 EMBEDDED_FILES.h : all_fF.tar.gz
2687 @echo Creating \$@ ...
2688 -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2689
2690 EOF
2691 fi
2692
2693 cat >>$MAKEFILE <<EOF
2694
2695 # The normal chain of rules is ( .F - .$FS - .o )
2696
2697 ## This nullifies any default implicit rules concerning these two file types:
2698 ## %.o : %.F
2699
2700 .F.$FS:
2701 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2702 .$FS.o:
2703 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2704 .F90.$FS90:
2705 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2706 .FF90.f$FS90:
2707 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2708 .$FS90.o:
2709 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2710 .f$FS90.o:
2711 cp \$< \$(basename \$<).f90
2712 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$(basename \$<).f90
2713 .c.o:
2714 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2715 .flow.flowdir:
2716 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2717
2718 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2719 .F.p:
2720 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2721 .p.$FS:
2722 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2723
2724 EOF
2725
2726 #=========================================
2727 #=== Automatic Differentiation Rules ===
2728 #=== for TAMC/TAF ======================
2729
2730 if test "x$OPENAD" == x ; then
2731
2732 cat >>$MAKEFILE <<EOF
2733
2734 TAMC = ${TAMC}
2735 TAF = ${TAF}
2736
2737 TAF_EXTRA = ${TAF_EXTRA}
2738 TAMC_EXTRA = ${TAMC_EXTRA}
2739
2740 EOF
2741
2742 ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2743 ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2744 ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2745 for i in $ad_vars ; do
2746 name=$i
2747 t1="t2=\$"`echo "$i"`
2748 eval $t1
2749 printf "%-20s = " $name >> $MAKEFILE
2750 echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2751 done
2752
2753 echo " Add the source list for AD code generation"
2754 echo >> $MAKEFILE
2755 printf "AD_FILES = " >> $MAKEFILE
2756 AD_FILES=`cat adSrcFiles.tmp`
2757 for i in $AD_FILES ; do
2758 echo " \\" >> $MAKEFILE
2759 printf " $i" >> $MAKEFILE
2760 done
2761 echo >> $MAKEFILE
2762 rm -f adSrcFiles.tmp
2763
2764 cat >>$MAKEFILE <<EOF
2765
2766 # ... AD ...
2767 adall: \$(EXE_AD)
2768 adtaf: ad_taf_output.$FS
2769 adtamc: ad_tamc_output.$FS
2770
2771 ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2772 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2773 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2774 -rm -f ad_config.template
2775 @make \$(F77_PP_SRC_FILES)
2776 @make \$(FLOFILES)
2777 cat \$(FLOFILES) \$(AD_FILES) > ad_input_code.$FS
2778
2779 ad_taf_output.$FS: ad_input_code.$FS
2780 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2781 ls -l ad_input_code_ad.$FS
2782 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2783
2784 adtafonly:
2785 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2786 ls -l ad_input_code_ad.$FS
2787 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2788
2789 \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2790 \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2791
2792 ad_tamc_output.$FS: ad_input_code.$FS
2793 \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2794 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2795
2796 ad_tamc: ad_tamc_output.o \$(OBJFILES)
2797 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2798
2799 adonlyfwd:
2800 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2801
2802 adtrick:
2803 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2804
2805 # ... FTL ...
2806 ftlall: ftl_taf
2807 ftltaf: ftl_taf_output.$FS
2808 ftltamc: ftl_tamc_output.$FS
2809
2810 ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
2811 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2812 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2813 -rm -f ftl_config.template
2814 @make \$(F77_PP_SRC_FILES)
2815 @make \$(AD_FLOW_FILES)
2816 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2817
2818 ftl_taf_output.$FS: ftl_input_code.$FS
2819 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2820 ls -l ftl_input_code_ftl.$FS
2821 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2822
2823 ftltafonly:
2824 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2825 ls -l ftl_input_code_ftl.$FS
2826 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2827
2828 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2829 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2830
2831 ftl_tamc_output.$FS: ftl_input_code.$FS
2832 \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2833 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2834
2835 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2836 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2837
2838
2839 # ... SVD ...
2840 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2841 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2842 @echo "--->>> Do make svdall afterwards to compile. <<<---"
2843 svdall: svd_touch svd_taf
2844
2845 svd_taf: \$(OBJFILES)
2846 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2847
2848 @echo "--->>> Only COMPILE svd code! <<<---"
2849 @echo "--->>> Assumes you previously <<<---"
2850 @echo "--->>> did make svdtaf <<<---"
2851
2852 svd_touch:
2853 @echo "--->>> Only COMPILE svd code! <<<---"
2854 @echo "--->>> Assumes you previously <<<---"
2855 @echo "--->>> did make svdtaf <<<---"
2856 touch ad_taf_output.$FS ftl_taf_output.$FS
2857 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2858 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2859 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2860 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2861 -rm -f ftl_config.template
2862
2863 EOF
2864
2865 fi
2866
2867 #=== for OpenAD ========================
2868
2869 if test "x$OPENAD" != x ; then
2870
2871 # ============ begin OpenAD specific section ==============
2872
2873 cat >>$MAKEFILE <<EOF
2874
2875 # all the source files linked from the various locations:
2876 ALL_LINKED_FILES= \
2877 \$(F77_SRC_FILES) \
2878 \$(C_SRC_FILES) \
2879 \$(H_SRC_FILES) \
2880 \$(F90_SRC_FILES) \
2881 \$(SPECIAL_FILES)
2882
2883 ifndef OPENADROOT
2884 \$(error "Error: environment variable OPENADROOT not defined!")
2885 endif
2886
2887 ifndef XAIFSCHEMAROOT
2888 \$(error "Error: environment variable XAIFSCHEMAROOT not defined!")
2889 endif
2890
2891 ifndef XAIFBOOSTERROOT
2892 \$(error "Error: environment variable XAIFBOOSTERROOT not defined!")
2893 endif
2894
2895 EOF
2896
2897 echo " Add the source list for common block to module conversion "
2898 echo >> $MAKEFILE
2899 printf "CB2M_F90_SRC_NAMES = " >> $MAKEFILE
2900 for i in `cat ${OAD_CB2M_FILES}` ; do
2901 echo " \\" >> $MAKEFILE
2902 printf " $i" >> $MAKEFILE
2903 done
2904 echo >> $MAKEFILE
2905
2906 echo " Add the source list for AD code generation"
2907 echo >> $MAKEFILE
2908 printf "AD_FILES = " >> $MAKEFILE
2909 for i in `cat ${OAD_CB2M_FILES}` ; do
2910 echo " \\" >> $MAKEFILE
2911 printf " ${i}_mod.f$FS90" >> $MAKEFILE
2912 done
2913 AD_FILES=`cat adSrcFiles.tmp`
2914 for i in $AD_FILES ; do
2915 basename=${i%%.f}
2916 toBeIgnored=`egrep ^$basename'[ ]*' ${OAD_DONT_COMPILE} ${OAD_DONT_TRANSFORM}`
2917 if test -z "$toBeIgnored" ; then
2918 echo " \\" >> $MAKEFILE
2919 printf " $i" >> $MAKEFILE
2920 fi
2921 done
2922 echo >> $MAKEFILE
2923 rm -f adSrcFiles.tmp
2924
2925 cat >>$MAKEFILE <<EOF
2926
2927 adAll: \$(EXE_AD)
2928 .PHONY: adAll
2929
2930 CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
2931
2932 .PRECIOUS: \$(CB2M_F90_PP_SRC_FILES) \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90)
2933
2934 .PHONY: adDepend
2935 adDepend: \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(addsuffix _mod.FF90, \$(CB2M_F90_SRC_NAMES)) \$(F77_SRC_FILES:.F=_cb2m.FF90)
2936 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
2937 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2938 -rm -f makedepend.out
2939
2940 OPENAD_SUPPORT_F90_SRC_FILES = \
2941 w2f__types.F90 \
2942 OAD_active.F90 \
2943 OAD_cp.F90 \
2944 OAD_rev.F90 \
2945 OAD_tape.F90
2946
2947 OPENAD_SUPPORT_C_SRC_FILES = \
2948 iaddr.c \
2949 timeRatio.c
2950
2951 f95_test_mods.f90: \$(OPENAD_SUPPORT_F90_SRC_FILES:F90=$FS90)
2952 cat \$^ > \$@
2953
2954 f95_test.f90: all_mods.xb.x2w.w2f.pp.f$FS90 \$(NON_AD_F77_SRC_FILES:.F=_cb2m.f$FS90) ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
2955 cat \$^ > \$@
2956
2957 f95_test.out: f95_test_mods.f90 f95_test.f90
2958 f95 -fixed -w=unused -maxcontin=132 -c f95_test_mods.f90 > \$@ 2>&1
2959 f95 -fixed -w=unused -maxcontin=132 -c -fixed f95_test.f90 >> \$@ 2>&1
2960
2961 AD_OBJ_FILES=\$(OPENAD_SUPPORT_F90_SRC_FILES:.F90=.o) \$(OPENAD_SUPPORT_C_SRC_FILES:.c=.o) all_mods.xb.x2w.w2f.pp.o ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.o \$(NON_AD_F77_SRC_FILES:.F=_cb2m.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o)
2962
2963 \$(EXE_AD): \$(ALL_LINKED_FILES) \$(addsuffix _mod.h, \$(CB2M_F90_SRC_NAMES)) \$(AD_OBJ_FILES)
2964 @echo Creating \$@ ...
2965 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(AD_OBJ_FILES) \$(LIBS)
2966
2967 # makefile debug rule
2968 openad: ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
2969 .PHONY: openad
2970
2971 # create the module files
2972 %_mod.FF90 : %.h ../OAD_support/cb2mGetModules.csh ../OAD_support/cb2mGetModules.awk
2973 ../OAD_support/cb2mGetModules.csh $< ../OAD_support/cb2mGetModules.awk
2974
2975 # create the header files
2976 %_mod.h : %.h ../OAD_support/cb2mGetHeaders.csh ../OAD_support/cb2mGetHeaders.awk
2977 ../OAD_support/cb2mGetHeaders.csh $< ../OAD_support/cb2mGetHeaders.awk \$(CB2M_F90_SRC_NAMES)
2978
2979 # change everybody else to use the new module files:
2980 %_cb2m.FF90 : %.F ../OAD_support/cb2mUseModules.bash
2981 ../OAD_support/cb2mUseModules.bash $< ${MPI}
2982
2983 # makefile debug rule
2984 small_f: \$(CB2M_F90_PP_SRC_FILES)
2985 .PHONY: small_f
2986
2987 ad_output.txt: \$(EXE_AD)
2988 @printf 'linking data files ... '
2989 \$(LN) -f ../input_ad/data* ../input_ad/eedata .
2990 \$(LN) -f ../../global_ocean.90x40x15/input/*.bin .
2991 @printf 'running ... '
2992 @./\$(EXE_AD) > \$@
2993
2994 CB2M_AD_FILES=\$(AD_FILES:.f=_cb2m.f$FS90)
2995 ad_input_code.f$FS90: ../OAD_support/maxMinDefs.f \$(CB2M_AD_FILES)
2996 cat \$^ > \$@
2997
2998 # strip all comments and blanks to reduce
2999 # the file size in order to reduce perl's memory requirements
3000 ad_input_code_sf.f$FS90 : ad_input_code.f$FS90
3001 cat \$^ | sed -f ../OAD_support/strip.sed | sed -f ../OAD_support/stop2print.sed > \$@
3002
3003 # mfef90 preprocessing
3004 # expand statement functions
3005 # expose mfef90 specific substring handling
3006 # add the w2f__types module
3007 ad_input_code_sf.w2f.f$FS90: ad_input_code_sf.f$FS90 mfef90 whirl2f whirl2f_be w2f__types.f90
3008 ./mfef90 -r8 -z -F -N132 \$<
3009 mv \$<.B \$(basename \$<).B
3010 ./whirl2f -openad \$(basename \$<).B
3011 cat w2f__types.f90 \$(basename \$<).w2f.f > \$@
3012
3013 # canonicalizer
3014 ad_input_code_sf.w2f.pre.f$FS90: ad_input_code_sf.w2f.f$FS90 preProcess.py
3015 ./preProcess.py -H -S \$< -o \$@
3016
3017 # F -> WHIRL
3018 # note that the canonicalized version cuts off at col 72
3019 # doing this also for string constants which is ok as long
3020 # as we are in fixed mode and cut of exactly there.
3021 # Otherwise mfef90 patches in spaces to fill up to 72 (or 132)
3022 # characters respectively.
3023 ad_input_code_sf.w2f.pre.B: ad_input_code_sf.w2f.pre.f$FS90 mfef90
3024 ./mfef90 -r8 -z -F \$<
3025 mv \$<.B \$@
3026
3027 # WHIRL -> XAIF
3028 ad_input_code_sf.w2f.pre.xaif : ad_input_code_sf.w2f.pre.B whirl2xaif
3029 ./whirl2xaif -s -n --debug 1 -o \$@ \$<
3030
3031 # XAIF -> XAIF'
3032 ad_input_code_sf.w2f.pre.xb.xaif : ad_input_code_sf.w2f.pre.xaif xaif.xsd xaif_base.xsd xaif_inlinable_intrinsics.xsd xaif_derivative_propagator.xsd xaif_output.xsd oadDriver
3033 ./oadDriver -f -t forward_step -i \$< -c \${XAIFSCHEMAROOT}/schema/examples/inlinable_intrinsics.xaif -o \$@ -I -r
3034
3035 # XAIF' -> WHIRL'
3036 ad_input_code_sf.w2f.pre.xb.x2w.B : ad_input_code_sf.w2f.pre.xb.xaif xaif2whirl
3037 ./xaif2whirl --debug 1 --structured ad_input_code_sf.w2f.pre.B \$<
3038
3039 # WHIRL' -> F'
3040 ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.B whirl2f whirl2f_be
3041 ./whirl2f -FLIST:ftn_file=\$@ -openad \$<
3042
3043 # insert template directives
3044 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.f$FS90 ../OAD_support/insertTemplateDir.bash
3045 ../OAD_support/insertTemplateDir.bash \$< \$@
3046
3047 # postprocess F'
3048 ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.f$FS90 multi-pp.pl ../OAD_support/ad_inline.f \$(wildcard ../OAD_support/ad_template.*.f)
3049 perl multi-pp.pl -inline=../OAD_support/ad_inline.f \$<
3050 # the postprocessor still gets the name wrong
3051 cat \$<.pp | sed 's/RETURN//' > \$@
3052
3053 # extract all transformed modules
3054 all_mods.xb.x2w.w2f.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3055 cat \$< | sed -n '/MODULE /,/END MODULE/p' > \$@
3056
3057 # remove the transformed globals module from the
3058 # transformed ad_input_code file
3059 # and remove for now the duplicate variables
3060 # and fix 2 data statements
3061 ad_input_code.w2f.pre.xb.x2w.w2f.td.pp.f$FS90: ad_input_code_sf.w2f.pre.xb.x2w.w2f.td.pp.f$FS90
3062 cat \$< | sed '/MODULE /,/END MODULE/d' | sed '/^ INTEGER(w2f__i4) DOLOOP_UB/d' > \$@
3063
3064 # setup some links
3065 %.xsd:
3066 \$(LN) \${XAIFSCHEMAROOT}/schema/\$@ .
3067
3068 mfef90:
3069 \$(LN) \${OPEN64ROOT}/crayf90/sgi/mfef90 .
3070
3071 # link the support files:
3072 \$(OPENAD_SUPPORT_F90_SRC_FILES) \$(OPENAD_SUPPORT_C_SRC_FILES):
3073 \$(LN) ../OAD_support/\$@ .
3074
3075 whirl2xaif xaif2whirl:
3076 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3077
3078 %.pl:
3079 \$(LN) \${OPENADFORTTK}/bin/\$@ .
3080
3081 preProcess.py:
3082 \$(LN) \${OPENADFORTTK_BASE}/tools/SourceProcessing/\$@ .
3083
3084 whirl2f whirl2f_be:
3085 \$(LN) \${OPEN64ROOT}/whirl2f/\$@ .
3086
3087 oadDriver:
3088 \$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/driver/oadDriver \$@
3089
3090 # ============ end OpenAD specific section ==============
3091
3092 EOF
3093
3094 fi
3095
3096 #=========================================
3097
3098 if test "x$EXEHOOK" != x ; then
3099 printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
3100 fi
3101
3102 echo " Making list of \"exceptions\" that need \".p\" files"
3103 for i in $KPPFILES ; do
3104 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3105 RETVAL=$?
3106 if test "x$RETVAL" != x0 ; then
3107 echo "Error: unable to add file \"$i\" to the exceptions list"
3108 fi
3109 echo "$base.$FS: $base.p" >> $MAKEFILE
3110 done
3111
3112 echo " Making list of NOOPTFILES"
3113 for i in $NOOPTFILES ; do
3114 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
3115 RETVAL=$?
3116 if test "x$RETVAL" != x0 ; then
3117 echo "Error: unable to add file \"$i\" to the exceptions list"
3118 fi
3119 echo "$base.o: $base.$FS" >> $MAKEFILE
3120 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
3121 done
3122
3123 echo " Add rules for links"
3124 cat srclinks.tmp >> $MAKEFILE
3125 rm -f srclinks.tmp
3126
3127 echo " Adding makedepend marker"
3128 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
3129
3130 printf "\n=== Done ===\n"
3131
3132 # Create special header files
3133 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
3134 if test ! -f $PACKAGES_DOT_H ; then
3135 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3136 else
3137 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
3138 RETVAL=$?
3139 if test "x$RETVAL" = x0 ; then
3140 rm -f $PACKAGES_DOT_H".tmp"
3141 else
3142 mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
3143 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
3144 fi
3145 fi
3146 if test ! -f AD_CONFIG.h ; then
3147 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
3148 fi
3149
3150
3151 # Write the "state" for future records
3152 if test "x$DUMPSTATE" != xf ; then
3153 printf "" > genmake_state
3154 for i in $gm_state ; do
3155 t1="t2=\$$i"
3156 eval $t1
3157 echo "$i='$t2'" >> genmake_state
3158 done
3159 fi

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