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Revision 1.143 - (show annotations) (download)
Tue Feb 14 16:21:09 2006 UTC (13 years, 5 months ago) by edhill
Branch: MAIN
CVS Tags: checkpoint58a_post
Changes since 1.142: +7 -1 lines
add help entry for the -ignoretime options

1 #! /usr/bin/env bash
2 #
3 # $Header: /u/gcmpack/MITgcm/tools/genmake2,v 1.142 2006/02/09 20:19:20 edhill Exp $
4 #
5 # Makefile generator for MITgcm UV codes
6 # created by cnh 03/98
7 # adapted by aja 06/98
8 # modified by aja 01/00
9 # rewritten in bash by eh3 08/03
10
11 # Search for particular CPP #cmds associated with packages
12 # usage: test_for_package_in_cpp_options CPP_file package_name
13 test_for_package_in_cpp_options() {
14 cpp_options=$1
15 pkg=$2
16 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99
17 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99
18 test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99
19 test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99
20 }
21
22 # Search for particular CPP #cmds associated with MPI
23 # usage: test_for_mpi_in_cpp_eeoptions CPP_file
24 test_for_mpi_in_cpp_eeoptions() {
25 cpp_options=$1
26 test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99
27 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99
28 test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99
29 test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99
30 }
31
32 # Search for particular string in a file. Return 1 if detected, 0 if not
33 # usage: test_for_string_in_file file string
34 test_for_string_in_file() {
35 file=$1
36 strng=$2
37 grep -i "$strng" $file > /dev/null 2>&1
38 RETVAL=$?
39 if test "x${RETVAL}" = x0 ; then
40 printf "Error: In $file there is an illegal line: "
41 grep -i "$strng" $file
42 return 1
43 fi
44 return 0
45 }
46
47 # Read the $ROOTDIR/pkg/pkg_groups file and expand any references to
48 # the package list.
49 expand_pkg_groups() {
50 new_packages=
51 PKG_GROUPS=$ROOTDIR"/pkg/pkg_groups"
52 if test -r $PKG_GROUPS ; then
53 cat $PKG_GROUPS | sed -e 's/#.*$//g' | sed -e 's/:/ : /g' > ./p1.tmp
54 cat ./p1.tmp | $AWK '(NF>2 && $2==":"){ print $0 }' > ./p2.tmp
55 matched=0
56 for i in $PACKAGES ; do
57 line=`grep "^ *$i" ./p2.tmp`
58 RETVAL=$?
59 if test "x$RETVAL" = x0 ; then
60 matched=1
61 replace=`echo $line | $AWK '{ $1=""; $2=""; print $0 }'`
62 echo " replacing \"$i\" with: $replace"
63 new_packages="$new_packages $replace"
64 else
65 new_packages="$new_packages $i"
66 fi
67 done
68 PACKAGES=$new_packages
69 rm -f ./p[1,2].tmp
70 return $matched
71 else
72 echo "Warning: can't read package groups definition file: $PKG_GROUPS"
73 fi
74 }
75
76 # Check for broken environments (eg. cygwin, MacOSX w/HFS+) that
77 # cannot distinguish [*.F/*.F90] from [*.f/*.f90] files.
78 check_for_broken_Ff() {
79 # Do we have defaults for $FS and/or $FS90 ?
80 tfs=f
81 tfs9=f90
82 if test "x$FS" != x ; then
83 tfs="$FS"
84 fi
85 if test "x$FS90" != x ; then
86 tfs9="$FS90"
87 fi
88
89 # First check the ability to create a *.F/.f pair.
90 cat <<EOF >> genmake_hello.F
91 program hello
92 write(*,*) 'hi'
93 stop
94 end
95 EOF
96 cp genmake_hello.F "genmake_hello."$tfs > /dev/null 2>&1
97 RETVAL=$?
98 if test "x$RETVAL" != x0 ; then
99 if test "x$FS" = x ; then
100 FS='for'
101 FS90='fr9'
102 check_for_broken_Ff
103 else
104 cat <<EOF 2>&1
105 ERROR: Your file system cannot distinguish between *.F and *.f files
106 (fails the "cp" test) and this program cannot find a suitable
107 replacement extension. Please try a different build environment or
108 contact the <MITgcm-support@mitgcm.org> list for help.
109
110 EOF
111 exit -1
112 fi
113 return
114 fi
115 rm -f genmake_hello.*
116
117 # Check the ability of ${MAKE} and ${LN} to use the current set
118 # of extensions.
119 cat <<EOF >> genmake_hello.F
120 program hello
121 write(*,*) 'hi'
122 stop
123 end
124 EOF
125 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
126 cat <<EOF >> $MAKEFILE
127 .SUFFIXES:
128 .SUFFIXES: .$tfs .F
129 .F.$tfs:
130 $LN \$< \$@
131 EOF
132 $MAKE "genmake_hello."$tfs > /dev/null 2>&1
133 RETVAL=$?
134 if test "x$RETVAL" != x0 -o ! -f "genmake_hello."$tfs ; then
135 if test "x$FS" = x ; then
136 FS='for'
137 FS90='fr9'
138 check_for_broken_Ff
139 else
140 cat <<EOF 2>&1
141 ERROR: Your file system cannot distinguish between *.F and *.f files
142 (fails the "make/ln" test) and this program cannot find a suitable
143 replacement extension. Please try a different build environment or
144 contact the <MITgcm-support@mitgcm.org> list for help.
145
146 EOF
147 exit -1
148 return
149 fi
150 fi
151 rm -f genmake_hello.* $MAKEFILE
152 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
153
154 # If we make it here, use the extensions
155 FS=$tfs
156 FS90=$tfs9
157 return
158 }
159
160
161 look_for_makedepend() {
162
163 # The "original" makedepend is part of the Imake system that is
164 # most often distributed with XFree86 or with an XFree86 source
165 # package. As a result, many machines (eg. generic Linux) do not
166 # have a system-default "makedepend" available. For those
167 # systems, we have two fall-back options:
168 #
169 # 1) a makedepend implementation shipped with the cyrus-imapd
170 # package: ftp://ftp.andrew.cmu.edu/pub/cyrus-mail/
171 #
172 # 2) a known-buggy xmakedpend shell script
173 #
174 # So the choices are, in order:
175 #
176 # 1) use the user-specified program
177 # 2) use a system-wide default
178 # 3) locally build and use the cyrus implementation
179 # 4) fall back to the buggy local xmakedpend script
180 #
181 if test "x${MAKEDEPEND}" = x ; then
182 which makedepend > /dev/null 2>&1
183 RV0=$?
184 test -f $MAKEFILE && mv -f $MAKEFILE $MAKEFILE".tst"
185 # echo 'MAKEFILE="'$MAKEFILE'"'
186 cat <<EOF >> $MAKEFILE
187 # THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
188 #
189 # Some "makedepend" implementations will die if they cannot
190 # find a Makefile -- so this file is here to gives them an
191 # empty one to find and parse.
192 EOF
193 cat <<EOF >> genmake_tc.f
194 program test
195 write(*,*) 'test'
196 stop
197 end
198 EOF
199 makedepend genmake_tc.f > /dev/null 2>&1
200 RV1=$?
201 test -f $MAKEFILE && rm -f $MAKEFILE
202 test -f $MAKEFILE".tst" && mv -f $MAKEFILE".tst" $MAKEFILE
203 if test "x${RV0}${RV1}" = x00 ; then
204 MAKEDEPEND=makedepend
205 else
206 echo " a system-default makedepend was not found."
207
208 # Try to build the cyrus implementation
209 build_cyrus_makedepend
210 RETVAL=$?
211 if test "x$RETVAL" != x0 ; then
212 MAKEDEPEND='$(TOOLSDIR)/xmakedepend'
213 fi
214 rm -f ./genmake_cy_md
215 fi
216 else
217 # echo "MAKEDEPEND=${MAKEDEPEND}"
218 echo "${MAKEDEPEND}" | grep -i cyrus > /dev/null 2>&1
219 RETVAL=$?
220 if test x"$RETVAL" = x0 ; then
221 build_cyrus_makedepend
222 fi
223 fi
224 }
225
226
227 build_cyrus_makedepend() {
228 rm -f ./genmake_cy_md
229 (
230 cd $ROOTDIR/tools/cyrus-imapd-makedepend \
231 && ./configure > /dev/null 2>&1 \
232 && make > /dev/null 2>&1
233 if test -x ./makedepend.exe ; then
234 $LN ./makedepend.exe ./makedepend
235 fi
236 ./makedepend ifparser.c > /dev/null 2>&1 \
237 && echo "true"
238 ) > ./genmake_cy_md
239 grep true ./genmake_cy_md > /dev/null 2>&1
240 RETVAL=$?
241 rm -f ./genmake_cy_md
242 if test "x$RETVAL" = x0 ; then
243 MAKEDEPEND='$(TOOLSDIR)/cyrus-imapd-makedepend/makedepend'
244 return 0
245 else
246 echo "WARNING: unable to build cyrus-imapd-makedepend"
247 return 1
248 fi
249 }
250
251
252 build_embed_encode()
253 {
254 printf " building the embed-encode utility... "
255 if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
256 if test ! -d "$ROOTDIR/tools/embed_encode" ; then
257 echo
258 echo " Error: can't locate \"$ROOTDIR/tools/embed_encode\""
259 echo
260 EMBED_SRC=f
261 return 1
262 fi
263 clist="cc gcc c89 $CC"
264 for ic in $clist ; do
265 comm="$ic -o encode_files encode_files.c"
266 ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
267 RETVAL=$?
268 if test "x$RETVAL" = x0 ; then
269 echo "OK"
270 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
271 return 0
272 fi
273 done
274 echo
275 echo " Error: unable to build $ROOTDIR/embed_encode/encode_files"
276 echo " so it has been disabled"
277 echo
278 EMBED_SRC=f
279 return 1
280 fi
281 echo "OK"
282 DEFINES="$DEFINES -DHAVE_EMBED_SRC"
283 }
284
285
286 # Guess possible config options for this host
287 find_possible_configs() {
288
289 tmp1=`uname`"_"`uname -m`
290 tmp2=`echo $tmp1 | sed -e 'y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/'`
291 tmp3=`echo $tmp2 | sed -e 's/power macintosh/ppc/'`
292 tmp1=`echo $tmp3 | sed -e 's|x86_64|amd64|'`
293 tmp2=`echo $tmp1 | sed -e 's/i[3-6]86/ia32/' | sed -e 's/athlon/ia32/'`
294 tmp3=`echo $tmp2 | sed -e 's/cray sv1/craysv1/'`
295 PLATFORM=$tmp3
296 echo $PLATFORM | grep cygwin > /dev/null 2>&1 && PLATFORM=cygwin_ia32
297 OFLIST=`(cd $ROOTDIR/tools/build_options; ls | grep "^$PLATFORM")`
298 echo " The platform appears to be: $PLATFORM"
299
300 echo "test" > test
301 ln -s ./test link
302 RETVAL=$?
303 if test "x${RETVAL}" = x0 ; then
304 LN="ln -s"
305 else
306 echo "Error: \"ln -s\" does not appear to work on this system!"
307 echo " For help, please contact <MITgcm-support@mitgcm.org>."
308 exit 1
309 fi
310 rm -f test link
311
312 if test "x$CPP" = x ; then
313 CPP="cpp -traditional -P"
314 fi
315
316 look_for_makedepend
317
318 #================================================================
319 # look for possible C compilers
320 tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"
321 p_CC=
322 for c in $tmp ; do
323 rm -f ./genmake_hello.c ./genmake_hello
324 cat >> genmake_hello.c << EOF
325 #include <stdio.h>
326 int main(int argc, char **argv) {
327 printf("Hello!\n");
328 return 0;
329 }
330 EOF
331 $c -o genmake_hello genmake_hello.c > /dev/null 2>&1
332 RETVAL=$?
333 if test "x${RETVAL}" = x0 ; then
334 p_CC="$p_CC $c"
335 fi
336 done
337 rm -f ./genmake_hello.c ./genmake_hello
338 if test "x${p_CC}" = x ; then
339 cat 1>&2 <<EOF
340
341 Error: No C compilers were found in your path. Please specify one using:
342
343 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
344 2) the CC or MITGCM_CC environment variables.
345
346 EOF
347 exit 1
348 else
349 echo " The possible C compilers found in your path are:"
350 echo " "$p_CC
351 if test "x$CC" = x ; then
352 CC=`echo $p_CC | $AWK '{print $1}'`
353 echo " Setting C compiler to: "$CC
354 fi
355 fi
356
357 #================================================================
358 # look for possible FORTRAN compilers
359 tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95 gfortran"
360 p_FC=
361 for c in $tmp ; do
362 rm -f ./hello.f ./hello
363 cat >> hello.f <<EOF
364 program hello
365 do i=1,3
366 print *, 'hello world : ', i
367 enddo
368 end
369 EOF
370 $c -o hello hello.f > /dev/null 2>&1
371 RETVAL=$?
372 if test "x${RETVAL}" = x0 ; then
373 p_FC="$p_FC $c"
374 fi
375 done
376 rm -f ./hello.f ./hello
377 if test "x${p_FC}" = x ; then
378 cat 1>&2 <<EOF
379
380 Error: No Fortran compilers were found in your path. Please specify one using:
381
382 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"),
383 2) a command-line option (eg. "-fc NAME"), or
384 3) the FC or MITGCM_FC environment variables.
385
386 EOF
387 exit 1
388 else
389 echo " The possible FORTRAN compilers found in your path are:"
390 echo " "$p_FC
391 fi
392
393 # Use the first of the compilers found in the current PATH
394 # that has a correctly-named optfile
395 if test "x$OPTFILE" = x -a "x$FC" = x ; then
396 for i in $p_FC ; do
397 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
398 if test -r $OPTFILE ; then
399 echo " Setting OPTFILE to: "$OPTFILE
400 break
401 fi
402 done
403 fi
404
405 if test "x$OPTFILE" = x ; then
406 OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$FC
407 if test ! -r $OPTFILE ; then
408 echo " I looked for the file "$OPTFILE" but did not find it"
409 fi
410 fi
411 # echo " The options file: $p_OF"
412 # echo " appears to match so we'll use it."
413 # for i in $p_FC ; do
414 #p_OF=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
415 #if test -r $p_OF ; then
416 # OPTFILE=$p_OF
417 # echo " The options file: $p_OF"
418 # echo " appears to match so we'll use it."
419 # break
420 #fi
421 # done
422 if test "x$OPTFILE" = x ; then
423 cat 1>&2 <<EOF
424
425 Error: No options file was found in: $ROOTDIR/tools/build_options/
426 that matches this platform ("$PLATFORM") and the compilers found in
427 your path. Please specify an "optfile" using:
428
429 1) the command line (eg. "-optfile=path/to/OPTFILE"), or
430 2) the MITGCM_OF environment variable.
431
432 If you need help, please contact the developers at <MITgcm-support@mitgcm.org>.
433
434 EOF
435 exit 1
436 fi
437
438 # # look for possible MPI libraries
439 # mpi_libs=
440 # mpi_fort=`which mpif77 2>/dev/null`
441 # RETVAL=$?
442 # if test "x${RETVAL}" = x0 ; then
443 # cat >>test.f <<EOF
444 # PROGRAM HELLO
445 # DO 10, I=1,10
446 # PRINT *,'Hello World'
447 # 10 CONTINUE
448 # STOP
449 # END
450 # EOF
451 # eval "$mpi_fort -showme test.f > out"
452 # RETVAL=$?
453 # if test "x${RETVAL}" = x0 ; then
454 # a=`cat out`
455 # for i in $a ; do
456 # case $i in
457 # -*)
458 # mpi_libs="$mpi_libs $i" ;;
459 # esac
460 # done
461 # echo "The MPI libs appear to be:"
462 # echo " "$mpi_libs
463 # fi
464 # rm -f test.f out
465 # fi
466
467 }
468
469 # Parse the package dependency information
470 get_pdepend_list() {
471
472 # strip the comments and then convert the dependency file into
473 # two arrays: PNAME, DNAME
474 cat $1 | sed -e 's/#.*$//g' \
475 | $AWK 'BEGIN{nn=0;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME["nn"]="$1"\nDNAME["nn"]="$i} }' \
476 > ./.pd_tmp
477 . ./.pd_tmp
478 rm -f ./.pd_tmp
479
480 printf "PNAME = "${}
481 }
482
483
484 # Explain usage
485 usage() {
486 cat <<EOF
487
488 Usage: "$0" [OPTIONS]
489 where [OPTIONS] can be:
490
491 -help | --help | -h | --h
492 Print this help message and exit.
493
494 -adoptfile NAME | --adoptfile NAME | -adof NAME | --adof NAME
495 -adoptfile=NAME | --adoptfile=NAME | -adof=NAME | --adof=NAME
496 Use "NAME" as the adoptfile. By default, the file at
497 "tools/adjoint_options/adjoint_default" will be used.
498
499 -nooptfile | --nooptfile
500 -optfile NAME | --optfile NAME | -of NAME | --of NAME
501 -optfile=NAME | --optfile=NAME | -of=NAME | --of=NAME
502 Use "NAME" as the optfile. By default, an attempt will be
503 made to find an appropriate "standard" optfile in the
504 tools/build_options/ directory.
505
506 -pdepend NAME | --pdepend NAME
507 -pdepend=NAME | --pdepend=NAME
508 Get package dependency information from "NAME".
509
510 -pdefault NAME | --pdefault NAME
511 -pdefault=NAME | --pdefault=NAME
512 Get the default package list from "NAME".
513
514 -make NAME | -m NAME
515 --make=NAME | -m=NAME
516 Use "NAME" for the MAKE program. The default is "make" but
517 many platforms, "gmake" is the preferred choice.
518
519 -makefile NAME | -mf NAME
520 --makefile=NAME | -mf=NAME
521 Call the makefile "NAME". The default is "Makefile".
522
523 -makedepend NAME | -md NAME
524 --makedepend=NAME | -md=NAME
525 Use "NAME" for the MAKEDEPEND program.
526
527 -rootdir NAME | --rootdir NAME | -rd NAME | --rd NAME
528 -rootdir=NAME | --rootdir=NAME | -rd=NAME | --rd=NAME
529 Specify the location of the MITgcm ROOTDIR as "NAME".
530 By default, genamke will try to find the location by
531 looking in parent directories (up to the 5th parent).
532
533 -mods NAME | --mods NAME | -mo NAME | --mo NAME
534 -mods=NAME | --mods=NAME | -mo=NAME | --mo=NAME
535 Here, "NAME" specifies a list of directories that are
536 used for additional source code. Files found in the
537 "mods list" are given preference over files of the same
538 name found elsewhere.
539
540 -disable NAME | --disable NAME
541 -disable=NAME | --disable=NAME
542 Here "NAME" specifies a list of packages that we don't
543 want to use. If this violates package dependencies,
544 genamke will exit with an error message.
545
546 -enable NAME | --enable NAME
547 -enable=NAME | --enable=NAME
548 Here "NAME" specifies a list of packages that we wish
549 to specifically enable. If this violates package
550 dependencies, genamke will exit with an error message.
551
552 -standarddirs NAME | --standarddirs NAME
553 -standarddirs=NAME | --standarddirs=NAME
554 Here, "NAME" specifies a list of directories to be
555 used as the "standard" code.
556
557 -fortran NAME | --fortran NAME | -fc NAME | --fc NAME
558 -fc=NAME | --fc=NAME
559 Use "NAME" as the fortran compiler. By default, genmake
560 will search for a working compiler by trying a list of
561 "usual suspects" such as g77, f77, etc.
562
563 -cc NAME | --cc NAME | -cc=NAME | --cc=NAME
564 Use "NAME" as the C compiler. By default, genmake
565 will search for a working compiler by trying a list of
566 "usual suspects" such as gcc, c89, cc, etc.
567
568 -[no]ieee | --[no]ieee
569 Do or don't use IEEE numerics. Note that this option
570 *only* works if it is supported by the OPTFILE that
571 is being used.
572
573 -ignoretime | -ignore_time | --ignoretime | --ignore_time
574 Ignore all the "wall clock" routines entirely. This will
575 not in any way hurt the model results -- it simply means
576 that the code that checks how long the model spends in
577 various routines will give junk values.
578
579 -ts | --ts
580 Produce timing information per timestep
581 -papis | --papis
582 Produce summary MFlop/s with PAPI per timestep
583 -foolad | --foolad
584 Fool the AD code generator
585 -papi | --papi
586 Performance analysis with PAPI
587 -hpmt | --hpmt
588 Performance analysis with the HPM Toolkit
589
590 -gsl | --gsl
591 Use GSL to control floating point rounding and precision
592
593 -mpi | --mpi
594 Include MPI header files and link to MPI libraries
595 -mpi=PATH | --mpi=PATH
596 Include MPI header files and link to MPI libraries using MPI_ROOT
597 set to PATH. i.e. Include files from \$PATH/include, link to libraries
598 from \$PATH/lib and use binaries from \$PATH/bin.
599
600 -es | --es | -embed-source | --embed-source
601 Embed a tarball containing the full source code
602 (including the Makefile, etc.) used to build the
603 executable [off by default]
604
605 -bash NAME
606 Explicitly specify the Bourne or BASH shell to use
607
608 While it is most often a single word, the "NAME" variables specified
609 above can in many cases be a space-delimited string such as:
610
611 --enable pkg1 --enable 'pkg1 pkg2' --enable 'pkg1 pkg2 pkg3'
612 -mods=dir1 -mods='dir1' -mods='dir1 dir2 dir3'
613 -foptim='-Mvect=cachesize:512000,transform -xtypemap=real:64,double:64,integer:32'
614
615 which, depending upon your shell, may need to be single-quoted.
616
617 For more detailed genmake documentation, please see:
618
619 http://mitgcm.org/devel_HOWTO/
620
621 EOF
622
623 exit 1
624 }
625
626 # Build a CPP macro to automate calling C routines from FORTRAN
627 get_fortran_c_namemangling() {
628
629 #echo "FC_NAMEMANGLE = \"$FC_NAMEMANGLE\""
630 if test ! "x$FC_NAMEMANGLE" = x ; then
631 return 0
632 fi
633
634 default_nm="#define FC_NAMEMANGLE(X) X ## _"
635
636 cat > genmake_test.c <<EOF
637 void tcall( char * string ) { tsub( string ); }
638 EOF
639 $MAKE genmake_test.o >> genmake_warnings 2>&1
640 RETVAL=$?
641 if test "x$RETVAL" != x0 ; then
642 FC_NAMEMANGLE=$default_nm
643 cat <<EOF>> genmake_errors
644
645 WARNING: C test compile fails
646 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
647 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
648 EOF
649 return 1
650 fi
651 c_tcall=`nm genmake_test.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
652 RETVAL=$?
653 if test "x$RETVAL" != x0 ; then
654 FC_NAMEMANGLE=$default_nm
655 cat <<EOF>> genmake_warnings
656
657 WARNING: The "nm" command failed.
658 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
659 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here
660 EOF
661 return 1
662 fi
663 cat > genmake_tcomp.$FS <<EOF
664 subroutine tcall( string )
665 character*(*) string
666 call tsub( string )
667 end
668 EOF
669 $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
670 RETVAL=$?
671 if test "x$RETVAL" != x0 ; then
672 FC_NAMEMANGLE=$default_nm
673 cat <<EOF>> genmake_warnings
674
675 WARNING: FORTRAN test compile fails -- please see "genmake_errors"
676 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
677 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
678 EOF
679 return 1
680 fi
681 f_tcall=`nm genmake_tcomp.o 2>/dev/null | grep 'T ' | grep tcall | cut -d ' ' -f 3`
682 RETVAL=$?
683 if test "x$RETVAL" != x0 ; then
684 FC_NAMEMANGLE=$default_nm
685 cat <<EOF>> genmake_warnings
686
687 WARNING: The "nm" command failed.
688 WARNING: We'll try to use: FC_NAMEMANGLE='$FC_NAMEMANGLE'
689 WARNING: Please contact <MITgcm-support@mitgcm.org> if you need help here.
690 EOF
691 return 1
692 fi
693
694 c_a=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
695 f_a=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 1 | sed -e 's|Y||'`
696 c_b=`echo $c_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
697 f_b=`echo $f_tcall | sed -e 's|tcall|Y Y|' | cut -d ' ' -f 2 | sed -e 's|Y||'`
698
699 nmangle="X"
700 if test "x$c_a" != "x$f_a" ; then
701 comm="echo x$f_a | sed -e 's|x$c_a||'"
702 a=`eval $comm`
703 nmangle="$a ## $nmangle"
704 fi
705 if test "x$c_b" != "x$f_b" ; then
706 comm="echo x$f_b | sed -e 's|x$c_b||'"
707 b=`eval $comm`
708 nmangle="$nmangle ## $b"
709 fi
710
711 FC_NAMEMANGLE="#define FC_NAMEMANGLE(X) $nmangle"
712
713 # cleanup the testing files
714 rm -f genmake_tcomp.* genmake_test.*
715 }
716
717
718 check_HAVE_CLOC() {
719 get_fortran_c_namemangling
720 cat <<EOF > genmake_tc_1.c
721 $FC_NAMEMANGLE
722 #include <stdio.h>
723 #include <stdlib.h>
724 #include <unistd.h>
725 #include <assert.h>
726 #include <sys/time.h>
727 void FC_NAMEMANGLE(cloc) ( double *curtim )
728 {
729 struct timeval tv1;
730 gettimeofday(&tv1 , (void *)NULL );
731 *curtim = (double)((tv1.tv_usec)+(tv1.tv_sec)*1.E6);
732 *curtim = *curtim/1.E6;
733 }
734 EOF
735 make genmake_tc_1.o >> genmake_warnings 2>&1
736 RET_C=$?
737 cat <<EOF > genmake_tc_2.$FS
738 program hello
739 REAL*8 wtime
740 external cloc
741 call cloc(wtime)
742 print *," HELLO WORLD", wtime
743 end
744 EOF
745 $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
746 RET_F=$?
747 test -x ./genmake_tc && ./genmake_tc >> genmake_warnings 2>&1
748 RETVAL=$?
749 if test "x$RETVAL" = x0 ; then
750 HAVE_CLOC=t
751 DEFINES="$DEFINES -DHAVE_CLOC"
752 fi
753 rm -f genmake_tc*
754 }
755
756
757 check_HAVE_SIGREG() {
758 get_fortran_c_namemangling
759 cat <<EOF > genmake_tc_1.c
760 $FC_NAMEMANGLE
761 #include <stdlib.h>
762 #include <stdio.h>
763 #include <signal.h>
764 #include <errno.h>
765 #include <ucontext.h>
766
767 int * ip;
768
769 static void killhandler(
770 unsigned int sn, siginfo_t si, struct ucontext *sc )
771 {
772 *ip = *ip + 1;
773 return;
774 }
775
776 void FC_NAMEMANGLE(sigreg) (int * aip)
777 {
778 struct sigaction s;
779 ip = aip;
780 s.sa_flags = SA_SIGINFO;
781 s.sa_sigaction = (void *)killhandler;
782 if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
783 printf("Sigaction returned error = %d\n", errno);
784 exit(0);
785 }
786 return;
787 }
788 EOF
789 make genmake_tc_1.o >> genmake_warnings 2>&1
790 RET_C=$?
791 cat <<EOF > genmake_tc_2.$FS
792 program hello
793 integer anint
794 common /iv/ anint
795 external sigreg
796 call sigreg(anint)
797 end
798 EOF
799 echo >> genmake_warnings
800 echo "running: check_HAVE_SIGREG()" >> genmake_warnings
801 cat genmake_tc_2.$FS >> genmake_warnings
802 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
803 echo $COMM >> genmake_warnings
804 $COMM >> genmake_warnings 2>&1
805 RETVAL=$?
806 if test "x$RETVAL" = x0 ; then
807 HAVE_SIGREG=t
808 DEFINES="$DEFINES -DHAVE_SIGREG"
809 fi
810 rm -f genmake_tc*
811 }
812
813
814 check_HAVE_SETRLSTK() {
815 get_fortran_c_namemangling
816 cat <<EOF > genmake_tc_1.c
817 $FC_NAMEMANGLE
818 #include <sys/time.h>
819 #include <sys/resource.h>
820 #include <unistd.h>
821 void FC_NAMEMANGLE(setrlstk) ()
822 {
823 struct rlimit rls;
824 rls.rlim_cur = RLIM_INFINITY;
825 rls.rlim_max = RLIM_INFINITY;
826 setrlimit(RLIMIT_STACK, &rls);
827 return;
828 }
829 EOF
830 make genmake_tc_1.o >> genmake_warnings 2>&1
831 RET_C=$?
832 cat <<EOF > genmake_tc_2.$FS
833 program hello
834 external setrlstk
835 call setrlstk()
836 end
837 EOF
838 echo >> genmake_warnings
839 echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
840 cat genmake_tc_2.$FS >> genmake_warnings
841 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
842 echo $COMM >> genmake_warnings
843 $COMM >> genmake_warnings 2>&1
844 RETVAL=$?
845 if test "x$RETVAL" = x0 ; then
846 HAVE_SETRLSTK=t
847 DEFINES="$DEFINES -DHAVE_SETRLSTK"
848 fi
849 rm -f genmake_tc*
850 }
851
852
853 check_HAVE_STAT() {
854 get_fortran_c_namemangling
855 cat <<EOF > genmake_tc_1.c
856 $FC_NAMEMANGLE
857 #include <stdio.h>
858 #include <stdlib.h>
859 #include <unistd.h>
860 #include <sys/stat.h>
861 #include <sys/types.h>
862 void FC_NAMEMANGLE(tfsize) ( int *nbyte )
863 {
864 char name[512];
865 struct stat astat;
866
867 name[0] = 'a'; name[1] = '\0';
868 if (! stat(name, &astat))
869 *nbyte = (int)(astat.st_size);
870 else
871 *nbyte = -1;
872 }
873 EOF
874 make genmake_tc_1.o >> genmake_tc.log 2>&1
875 RET_C=$?
876 cat <<EOF > genmake_tc_2.$FS
877 program hello
878 integer nbyte
879 call tfsize(nbyte)
880 print *," HELLO WORLD", nbyte
881 end
882 EOF
883 echo >> genmake_warnings
884 echo "running: check_HAVE_STAT()" >> genmake_warnings
885 cat genmake_tc_2.$FS >> genmake_warnings
886 COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
887 echo $COMM >> genmake_warnings
888 $COMM >> genmake_tc.log 2>&1
889 RETVAL=$?
890 if test "x$RETVAL" = x0 ; then
891 HAVE_STAT=t
892 DEFINES="$DEFINES -DHAVE_STAT"
893 fi
894 rm -f genmake_tc*
895 }
896
897
898 check_netcdf_libs() {
899 if test ! "x$SKIP_NETCDF_CHECK" = x ; then
900 return
901 fi
902 echo >> genmake_warnings
903 echo "running: check_netcdf_libs()" >> genmake_warnings
904 cat <<EOF > genmake_tnc.F
905 program fgennc
906 #include "netcdf.inc"
907 EOF
908 if test ! "x$MPI" = x ; then
909 echo '#include "mpif.h"' >> genmake_tnc.F
910 fi
911 cat <<EOF >> genmake_tnc.F
912 integer iret, ncid, xid
913 iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
914 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
915 iret = nf_def_dim(ncid, 'X', 11, xid)
916 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
917 iret = nf_close(ncid)
918 IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
919 end
920 EOF
921 echo "=== genmake_tnc.F ===" > genmake_tnc.log
922 cat genmake_tnc.F >> genmake_tnc.log
923 echo "=== genmake_tnc.F ===" >> genmake_tnc.log
924 RET_CPP=f
925 COMM="$CPP $DEFINES $INCLUDES genmake_tnc.F"
926 echo "$COMM" >> genmake_tnc.log
927 $COMM > genmake_tnc.$FS 2>/dev/null && RET_CPP=t
928 if test "x$RET_CPP" = xf ; then
929 echo " WARNING: CPP failed to pre-process the netcdf test." \
930 >> genmake_tnc.log
931 echo " Please check that \$INCLUDES is properly set." \
932 >> genmake_tnc.log
933 fi
934 echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
935 echo " && $LINK -o genmake_tnc.o $LIBS" >> genmake_tnc.log
936 $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
937 && $LINK -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
938 RET_COMPILE=$?
939 cat genmake_tnc.log >> genmake_warnings
940
941 #EH3 Remove test program execution for machines that either disallow
942 #EH3 execution or cannot support it (eg. cross-compilers)
943 #EH3
944 #EH3 test -x ./genmake_tnc && ./genmake_tnc >> genmake_tnc.log 2>&1
945 #EH3 RETVAL=$?
946 #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
947
948 if test "x$RET_COMPILE" = x0 ; then
949 HAVE_NETCDF=t
950 else
951 # try again with "-lnetcdf" added to the libs
952 echo "try again with added '-lnetcdf'" > genmake_tnc.log
953 echo "$CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS \ " >> genmake_tnc.log
954 echo " && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
955 echo " && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
956 $CPP $DEFINES $INCLUDES genmake_tnc.F > genmake_tnc.$FS 2>/dev/null \
957 && $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1 \
958 && $LINK -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
959 RET_COMPILE=$?
960 cat genmake_tnc.log >> genmake_warnings
961 if test "x$RET_COMPILE" = x0 ; then
962 LIBS="$LIBS -lnetcdf"
963 HAVE_NETCDF=t
964 fi
965 fi
966 rm -f genmake_tnc*
967 }
968
969
970
971 ###############################################################################
972 # Sequential part of script starts here
973 ###############################################################################
974
975 # Set defaults here
976 COMMANDL="$0 $@"
977
978 PLATFORM=
979 LN=
980 S64=
981 KPP=
982 #FC=
983 #CC=gcc
984 #CPP=
985 LINK=
986 DEFINES=
987 PACKAGES=
988 ENABLE=
989 DISABLE=
990 # MAKEFILE=
991 # MAKEDEPEND=
992 PDEPEND=
993 DUMPSTATE=t
994 PDEFAULT=
995 OPTFILE=
996 INCLUDES="-I. $INCLUDES"
997 FFLAGS=
998 FOPTIM=
999 CFLAGS=
1000 KFLAGS1=
1001 KFLAGS2=
1002 #LDADD=
1003 LIBS=
1004 KPPFILES=
1005 NOOPTFILES=
1006 NOOPTFLAGS=
1007 MPI=
1008 MPIPATH=
1009 TS=
1010 PAPIS=
1011 FOOLAD=
1012 PAPI=
1013 HPMT=
1014 GSL=
1015 HAVE_TEST_L=
1016
1017 # DEFINES checked by test compilation or command-line
1018 HAVE_SYSTEM=
1019 HAVE_FDATE=
1020 FC_NAMEMANGLE=
1021 HAVE_CLOC=
1022 HAVE_SETRLSTK=
1023 HAVE_STAT=
1024 HAVE_NETCDF=
1025 HAVE_ETIME=
1026 IGNORE_TIME=
1027
1028 MODS=
1029 TOOLSDIR=
1030 SOURCEDIRS=
1031 INCLUDEDIRS=
1032 STANDARDDIRS="USE_THE_DEFAULT"
1033
1034 G2ARGS=
1035 BASH=
1036 PWD=`pwd`
1037 test "x$MAKE" = x && MAKE=make
1038 test "x$AWK" = x && AWK=awk
1039 EMBED_SRC=
1040 THISHOST=`hostname`
1041 THISCWD=`pwd`
1042 THISDATE=`date`
1043 THISUSER=`echo $USER`
1044 THISVER=
1045 MACHINE=`uname -a`
1046 EXECUTABLE=
1047 EXEHOOK=
1048 EXEDIR=
1049 PACKAGES_CONF=
1050 IEEE=
1051 if test "x$MITGCM_IEEE" != x ; then
1052 IEEE=$MITGCM_IEEE
1053 fi
1054 FS=
1055 FS90=
1056
1057 AUTODIFF_PKG_USED=f
1058 AD_OPTFILE=
1059 TAF=
1060 AD_TAF_FLAGS=
1061 FTL_TAF_FLAGS=
1062 SVD_TAF_FLAGS=
1063 TAF_EXTRA=
1064 TAMC=
1065 AD_TAMC_FLAGS=
1066 FTL_TAF_FLAGS=
1067 SVD_TAMC_FLAGS=
1068 TAMC_EXTRA=
1069
1070
1071 # The following state can be set directly by command-line switches
1072 gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1073 gm_s2="FC CPP IEEE TS PAPIS PAPI HPMT GSL MPI JAM DUMPSTATE STANDARDDIRS"
1074
1075 # The following state is not directly set by command-line switches
1076 gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
1077 gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1078 gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1079 gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1080 gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1081
1082 # The following are all related to adjoint/tangent-linear stuff
1083 gm_s10="AUTODIFF_PKG_USED AD_OPTFILE TAMC TAF AD_TAMC_FLAGS AD_TAF_FLAGS"
1084 gm_s11="FTL_TAMC_FLAGS FTL_TAF_FLAGS SVD_TAMC_FLAGS SVD_TAF_FLAGS"
1085 gm_s12="TAF_EXTRA TAMC_EXTRA"
1086
1087 gm_state="COMMANDL $gm_s1 $gm_s2 $gm_s3 $gm_s4 $gm_s5 $gm_s6 $gm_s7"
1088 gm_state="$gm_state $gm_s10 $gm_s11 $gm_s12"
1089
1090 cat <<EOF
1091
1092 GENMAKE :
1093
1094 A program for GENerating MAKEfiles for the MITgcm project. For a
1095 quick list of options, use "genmake -h" or for more detail see:
1096
1097 http://mitgcm.org/devel_HOWTO/
1098
1099 EOF
1100
1101 echo "=== Processing options files and arguments ==="
1102 gm_local="genmake_local"
1103 for i in . $MODS ; do
1104 if test -r $i/$gm_local ; then
1105 . $i/$gm_local
1106 break
1107 fi
1108 done
1109 printf " getting local config information: "
1110 if test -f $gm_local ; then
1111 echo "using $gm_local"
1112 . $gm_local
1113 # echo "DISABLE=$DISABLE"
1114 # echo "ENABLE=$ENABLE"
1115 else
1116 echo "none found"
1117 fi
1118
1119 #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1120 #OPTIONS=
1121 #n=0
1122 #for i ; do
1123 # echo "$i $n"
1124 # setvar="OPTIONS[$n]='$i'"
1125 # # echo " $setvar"
1126 # eval "$setvar"
1127 # n=$(( $n + 1 ))
1128 #done
1129 #parse_options
1130 ac_prev=
1131 for ac_option in "$@" ; do
1132
1133 G2ARGS="$G2ARGS \"$ac_option\""
1134
1135 # If the previous option needs an argument, assign it.
1136 if test -n "$ac_prev"; then
1137 eval "$ac_prev=\$ac_option"
1138 ac_prev=
1139 continue
1140 fi
1141
1142 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
1143
1144 case $ac_option in
1145
1146 -help | --help | -h | --h)
1147 usage ;;
1148
1149 -nooptfile | --nooptfile)
1150 OPTFILE="NONE" ;;
1151 -optfile | --optfile | -of | --of)
1152 ac_prev=OPTFILE ;;
1153 -optfile=* | --optfile=* | -of=* | --of=*)
1154 OPTFILE=$ac_optarg ;;
1155
1156 -adoptfile | --adoptfile | -adof | --adof)
1157 ac_prev=AD_OPTFILE ;;
1158 -adoptfile=* | --adoptfile=* | -adof=* | --adof=*)
1159 AD_OPTFILE=$ac_optarg ;;
1160
1161 -pdepend | --pdepend)
1162 ac_prev=PDEPEND ;;
1163 -pdepend=* | --pdepend=*)
1164 PDEPEND=$ac_optarg ;;
1165
1166 -pdefault | --pdefault)
1167 ac_prev=PDEFAULT ;;
1168 -pdefault=* | --pdefault=*)
1169 PDEFAULT=$ac_optarg ;;
1170
1171 -make | --make | -m | --m)
1172 ac_prev=MAKE ;;
1173 -make=* | --make=* | -m=* | --m=*)
1174 MAKE=$ac_optarg ;;
1175
1176 -bash | --bash)
1177 ac_prev=BASH ;;
1178 -bash=* | --bash=*)
1179 BASH=$ac_optarg ;;
1180
1181 -makedepend | --makedepend | -md | --md)
1182 ac_prev=MAKEDEPEND ;;
1183 -makedepend=* | --makedepend=* | -md=* | --md=*)
1184 MAKEDEPEND=$ac_optarg ;;
1185
1186 -makefile | --makefile | -ma | --ma)
1187 ac_prev=MAKEFILE ;;
1188 -makefile=* | --makefile=* | -ma=* | --ma=*)
1189 MAKEFILE=$ac_optarg ;;
1190
1191 -platform | --platform | -pl | --pl | -platform=* | --platform=* | -pl=* | --pl=*)
1192 echo "ERROR: The platform option has been removed. Please specify"
1193 echo " the build options using the \"optfile\" mechanism."
1194 echo
1195 usage
1196 ;;
1197
1198 -rootdir | --rootdir | -rd | --rd)
1199 ac_prev=ROOTDIR ;;
1200 -rootdir=* | --rootdir=* | -rd=* | --rd=*)
1201 ROOTDIR=$ac_optarg ;;
1202
1203 -mods | --mods | -mo | --mo)
1204 ac_prev=MODS ;;
1205 -mods=* | --mods=* | -mo=* | --mo=*)
1206 MODS=$ac_optarg ;;
1207
1208 -disable | --disable)
1209 ac_prev=DISABLE ;;
1210 -disable=* | --disable=*)
1211 DISABLE=$ac_optarg ;;
1212
1213 -enable | --enable)
1214 ac_prev=ENABLE ;;
1215 -enable=* | --enable=*)
1216 ENABLE=$ac_optarg ;;
1217
1218 -standarddirs | --standarddirs)
1219 ac_prev=STANDARDDIRS ;;
1220 -standarddirs=* | --standarddirs=*)
1221 STANDARDDIRS=$ac_optarg ;;
1222
1223 # -cpp | --cpp)
1224 # ac_prev=cpp ;;
1225 # -cpp=* | --cpp=*)
1226 # CPP=$ac_optarg ;;
1227
1228 -cc | --cc)
1229 ac_prev=CC ;;
1230 -cc=* | --cc=*)
1231 CC=$ac_optarg ;;
1232
1233 -fortran | --fortran | -fc | --fc)
1234 ac_prev=FC ;;
1235 -fc=* | --fc=*)
1236 FC=$ac_optarg ;;
1237
1238 -fs | --fs)
1239 ac_prev=FS ;;
1240 -fs=* | --fs=*)
1241 FS=$ac_optarg ;;
1242
1243 -fs90 | --fs90)
1244 ac_prev=FS90 ;;
1245 -fs90=* | --fs90=*)
1246 FS90=$ac_optarg ;;
1247
1248 -ieee | --ieee)
1249 IEEE=true ;;
1250 -noieee | --noieee)
1251 IEEE= ;;
1252
1253 -ts | --ts)
1254 TS=true ;;
1255 -papis | --papis)
1256 PAPIS=true ;;
1257 -foolad | --foolad)
1258 FOOLAD=true ;;
1259 -papi | --papi)
1260 PAPI=true ;;
1261 -hpmt | --hpmt)
1262 HPMT=true ;;
1263
1264 -gsl | --gsl)
1265 GSL=true ;;
1266
1267 -mpi | --mpi)
1268 MPI=true ;;
1269 -mpi=* | --mpi=*)
1270 MPIPATH=$ac_optarg
1271 MPI=true ;;
1272
1273 # -jam | --jam)
1274 # JAM=1 ;;
1275 # -nojam | --nojam)
1276 # JAM=0 ;;
1277
1278 -ds | --ds)
1279 DUMPSTATE=t ;;
1280
1281 -taf_extra | --taf_extra)
1282 ac_prev=TAF_EXTRA ;;
1283 -taf_extra=* | --taf_extra=*)
1284 TAF_EXTRA=$ac_optarg ;;
1285
1286 -tamc_extra | --tamc_extra)
1287 ac_prev=TAMC_EXTRA ;;
1288 -tamc_extra=* | --tamc_extra=*)
1289 TAMC_EXTRA=$ac_optarg ;;
1290
1291 -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1292 IGNORE_TIME="-DIGNORE_TIME" ;;
1293
1294 -es | --es | -embed-source | --embed-source)
1295 EMBED_SRC=t ;;
1296
1297 -*)
1298 echo "Error: unrecognized option: "$ac_option
1299 usage
1300 ;;
1301
1302 *)
1303 echo "Error: unrecognized argument: "$ac_option
1304 usage
1305 ;;
1306
1307 esac
1308
1309 done
1310
1311
1312 if test -f ./.genmakerc ; then
1313 echo
1314 echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1315 echo " file. This file format is no longer supported. Please see:"
1316 echo
1317 echo " http://mitgcm.org/devel_HOWTO/"
1318 echo
1319 echo " for directions on how to setup and use the new \"genmake2\" input"
1320 echo " files and send an email to MITgcm-support@mitgcm.org if you want help."
1321 echo
1322 fi
1323
1324 # Find the MITgcm ${ROOTDIR}
1325 if test "x${ROOTDIR}" = x ; then
1326 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1327 if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then
1328 ROOTDIR=".."
1329 else
1330 for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
1331 if [ -d "$d/model" -a -d "$d/eesupp" -a -d "$d/pkg" ]; then
1332 ROOTDIR=$d
1333 printf "Warning: ROOTDIR was not specified but there appears to be"
1334 echo " a copy of MITgcm at \"$ROOTDIR\" so we'll try it."
1335 break
1336 fi
1337 done
1338 fi
1339 fi
1340 if test "x${ROOTDIR}" = x ; then
1341 echo "Error: Cannot determine ROOTDIR for MITgcm code."
1342 echo " Please specify a ROOTDIR using either an options "
1343 echo " file or a command-line option."
1344 exit 1
1345 fi
1346 if test ! -d ${ROOTDIR} ; then
1347 echo "Error: the specified ROOTDIR (\"$ROOTDIR\") does not exist!"
1348 exit 1
1349 fi
1350
1351 # Find the MITgcm ${THISVER}
1352 if test -f "${ROOTDIR}/doc/tag-index" ; then
1353 THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1`
1354 fi
1355
1356 if test "x$MAKEFILE" = x ; then
1357 MAKEFILE="Makefile"
1358 fi
1359
1360 echo " getting OPTFILE information: "
1361 if test "x${OPTFILE}" = x ; then
1362 if test "x$MITGCM_OF" = x ; then
1363 echo "Warning: no OPTFILE specified so we'll look for possible settings"
1364 printf "\n=== Searching for possible settings for OPTFILE ===\n"
1365 find_possible_configs
1366 else
1367 OPTFILE=$MITGCM_OF
1368 fi
1369 fi
1370 if test "x$OPTFILE" != xNONE ; then
1371 if test -f "$OPTFILE" -a -r "$OPTFILE" ; then
1372 echo " using OPTFILE=\"$OPTFILE\""
1373 . "$OPTFILE"
1374 RETVAL=$?
1375 if test "x$RETVAL" != x0 ; then
1376 printf "Error: failed to source OPTFILE \"$OPTFILE\""
1377 echo "--please check that variable syntax is bash-compatible"
1378 exit 1
1379 fi
1380 if test "x$DUMPSTATE" != xf ; then
1381 cp -f $OPTFILE "genmake_optfile"
1382 fi
1383 else
1384 echo "Error: can't read OPTFILE=\"$OPTFILE\""
1385 exit 1
1386 fi
1387 fi
1388
1389 echo " getting AD_OPTFILE information: "
1390 if test "x${AD_OPTFILE}" = x ; then
1391 if test "x$MITGCM_AD_OF" = x ; then
1392 AD_OPTFILE=$ROOTDIR/tools/adjoint_options/adjoint_default
1393 else
1394 AD_OPTFILE=$MITGCM_AD_OF
1395 fi
1396 fi
1397 if test "x${AD_OPTFILE}" != xNONE ; then
1398 if test -f "$AD_OPTFILE" -a -r "$AD_OPTFILE" ; then
1399 echo " using AD_OPTFILE=\"$AD_OPTFILE\""
1400 . "$AD_OPTFILE"
1401 RETVAL=$?
1402 if test "x$RETVAL" != x0 ; then
1403 printf "Error: failed to source AD_OPTFILE \"$AD_OPTFILE\""
1404 echo "--please check that variable syntax is bash-compatible"
1405 exit 1
1406 fi
1407 if test "x$DUMPSTATE" != xf ; then
1408 cp -f $AD_OPTFILE "genmake_ad_optfile"
1409 fi
1410 else
1411 echo "Error: can't read AD_OPTFILE=\"$AD_OPTFILE\""
1412 exit 1
1413 fi
1414 fi
1415
1416 #====================================================================
1417 # Set default values if not set by the optfile
1418 #
1419 # Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined. If not,
1420 # either set defaults or complain and abort!
1421 if test ! "x$BASH" = x ; then
1422 # add a trailing space so that it works within the Makefile syntax (see below)
1423 BASH="$BASH "
1424 fi
1425 if test "x$FC" = x ; then
1426 cat <<EOF 1>&2
1427
1428 Error: no Fortran compiler: please specify using one of the following:
1429 1) within the options file ("FC=...") as specified by "-of=OPTFILE"
1430 2) the "-fc=XXX" command-line option
1431 3) the "./genmake_local" file
1432 EOF
1433 exit 1
1434 fi
1435 if test "x$CC" = x ; then
1436 CC=cc
1437 # cat <<EOF 1>&2
1438 # Error: no C compiler: please specify using one of the following:
1439 # 1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1440 # 2) the "-cc=XXX" command-line option
1441 # 3) the "./genmake_local" file
1442 # EOF
1443 # exit 1
1444 fi
1445 if test "x$LINK" = x ; then
1446 LINK=$FC
1447 fi
1448 if test "x$MAKE" = x ; then
1449 MAKE="make"
1450 fi
1451 if test "x$CPP" = x ; then
1452 CPP=cpp
1453 fi
1454 #EH3 === UGLY ===
1455 # The following is an ugly little hack to check for $CPP in /lib/ and
1456 # it should eventually be replaced with a more general function that
1457 # searches a combo of the user's path and a list of "usual suspects"
1458 # to find the correct location for binaries such as $CPP.
1459 for i in " " "/lib/" ; do
1460 echo "#define A a" | $i$CPP > test_cpp 2>&1 && CPP=$i$CPP
1461 done
1462 #EH3 === UGLY ===
1463 echo "#define A a" | $CPP > test_cpp 2>&1
1464 RETVAL=$?
1465 if test "x$RETVAL" != x0 ; then
1466 cat <<EOF 1>&2
1467
1468 Error: C pre-processor "$CPP" failed the test case: please specify using:
1469
1470 1) within the options file ("CPP=...") as specified by "-of=OPTFILE"
1471 2) the "./genmake_local" file
1472 3) with the CPP environment variable
1473
1474 EOF
1475 exit 1
1476 else
1477 rm -f test_cpp
1478 fi
1479 look_for_makedepend
1480 if test "x$LN" = x ; then
1481 LN="ln -s"
1482 fi
1483 echo "test" > genmake_test_ln
1484 $LN genmake_test_ln genmake_tlink
1485 RETVAL=$?
1486 if test "x$RETVAL" != x0 ; then
1487 cat <<EOF 1>&2
1488
1489 Error: The command "ln -s" failed -- please specify a working soft-link
1490 command in the optfile.
1491
1492 EOF
1493 exit 1
1494 fi
1495 test -L genmake_tlink > /dev/null 2>&1
1496 RETVAL=$?
1497 if test "x$RETVAL" = x0 ; then
1498 HAVE_TEST_L=t
1499 fi
1500 rm -f genmake_test_ln genmake_tlink
1501
1502 # Check for broken *.F/*.f handling and fix if possible
1503 check_for_broken_Ff
1504
1505 if test ! "x$MPI" = x ; then
1506 echo " Turning on MPI cpp macros"
1507 DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1508 fi
1509
1510 if test ! "x$TS" = x ; then
1511 echo " Turning on timing per timestep"
1512 if test ! "x$FOOLAD" = x ; then
1513 DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1514 else
1515 DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1516 fi
1517 fi
1518 if test ! "x$PAPIS" = x ; then
1519 echo " Turning on PAPI flop summary per timestep"
1520 echo " Please make sure PAPIINC, PAPILIB are defined"
1521 if test ! "x$FOOLAD" = x ; then
1522 DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1523 else
1524 DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1525 fi
1526 INCLUDES="$INCLUDES $PAPIINC"
1527 LIBS="$LIBS $PAPILIB"
1528 fi
1529 if test ! "x$PAPI" = x ; then
1530 if test ! "x$PAPIS" = x ; then
1531 echo " PAPI performance analysis and flop summary per timestep cannot co-exist!"
1532 echo " Sticking with PAPI flop summary per timestep!"
1533 else
1534 echo " Turning on performance analysis with PAPI"
1535 echo " Please make sure PAPIINC, PAPILIB are defined"
1536 DEFINES="$DEFINES -DUSE_PAPI"
1537 INCLUDES="$INCLUDES $PAPIINC"
1538 LIBS="$LIBS $PAPILIB"
1539 fi
1540 fi
1541 if test ! "x$HPMT" = x ; then
1542 if test ! "x$PAPI" = x ; then
1543 echo " PAPI and the HPM Toolkit cannot co-exist!"
1544 echo " Sticking with PAPI!"
1545 else
1546 echo " Turning on performance analysis with the HPM Toolkit"
1547 echo " Please make sure HPMTINC, HPMTLIB are defined"
1548 DEFINES="$DEFINES -DUSE_LIBHPM"
1549 INCLUDES="$INCLUDES $HPMTINC"
1550 LIBS="$LIBS $HPMTLIB"
1551 fi
1552 fi
1553 if test ! "x$GSL" = x ; then
1554 echo " Turning on use of GSL to control floating point calculations"
1555 echo " Please make sure GSLINC, GSLLIB are defined"
1556 DEFINES="$DEFINES -DUSE_GSL_IEEE"
1557 INCLUDES="$INCLUDES $GSLINC"
1558 LIBS="$LIBS $GSLLIB"
1559 fi
1560
1561 printf "\n=== Checking system libraries ===\n"
1562 printf " Do we have the system() command using $FC... "
1563 cat > genmake_tcomp.$FS <<EOF
1564 program hello
1565 call system('echo hi')
1566 end
1567 EOF
1568 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1569 RETVAL=$?
1570 if test "x$RETVAL" = x0 ; then
1571 HAVE_SYSTEM=t
1572 DEFINES="$DEFINES -DHAVE_SYSTEM"
1573 echo "yes"
1574 else
1575 HAVE_SYSTEM=
1576 echo "no"
1577 fi
1578 rm -f genmake_tcomp*
1579
1580 printf " Do we have the fdate() command using $FC... "
1581 cat > genmake_tcomp.$FS <<EOF
1582 program hello
1583 CHARACTER*(128) string
1584 string = ' '
1585 call fdate( string )
1586 print *, string
1587 end
1588 EOF
1589 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1590 RETVAL=$?
1591 if test "x$RETVAL" = x0 ; then
1592 HAVE_FDATE=t
1593 DEFINES="$DEFINES -DHAVE_FDATE"
1594 echo "yes"
1595 else
1596 HAVE_FDATE=
1597 echo "no"
1598 fi
1599 rm -f genmake_tcomp*
1600
1601 printf " Do we have the etime() command using $FC... "
1602 cat > genmake_tcomp.$FS <<EOF
1603 program hello
1604 REAL*4 ACTUAL, TARRAY(2)
1605 EXTERNAL ETIME
1606 REAL*4 ETIME
1607 actual = etime( tarray )
1608 print *, tarray
1609 end
1610 EOF
1611 $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1612 RETVAL=$?
1613 if test "x$RETVAL" = x0 ; then
1614 HAVE_ETIME=t
1615 DEFINES="$DEFINES -DHAVE_ETIME"
1616 echo "yes"
1617 else
1618 HAVE_ETIME=
1619 echo "no"
1620 fi
1621 rm -f genmake_tcomp*
1622
1623 printf " Can we call simple C routines (here, \"cloc()\") using $FC... "
1624 check_HAVE_CLOC
1625 if test "x$HAVE_CLOC" != x ; then
1626 echo "yes"
1627 else
1628 echo "no"
1629 if test "x$EMBED_SRC" = xt ; then
1630 echo " WARNING: you requested file embedding but it has"
1631 echo " been disabled since C code cannot be called"
1632 EMBED_SRC=
1633 fi
1634 fi
1635 rm -f genmake_t*
1636
1637 printf " Can we unlimit the stack size using $FC... "
1638 check_HAVE_SETRLSTK
1639 if test "x$HAVE_SETRLSTK" != x ; then
1640 echo "yes"
1641 else
1642 echo "no"
1643 fi
1644 rm -f genmake_t*
1645
1646 printf " Can we register a signal handler using $FC... "
1647 check_HAVE_SIGREG
1648 if test "x$HAVE_SIGREG" != x ; then
1649 echo "yes"
1650 else
1651 echo "no"
1652 fi
1653 rm -f genmake_t*
1654
1655 printf " Can we use stat() through C calls... "
1656 check_HAVE_STAT
1657 if test "x$HAVE_STAT" != x ; then
1658 echo "yes"
1659 else
1660 echo "no"
1661 fi
1662 rm -f genmake_t*
1663
1664 printf " Can we create NetCDF-enabled binaries... "
1665 check_netcdf_libs
1666 if test "x$HAVE_NETCDF" != x ; then
1667 echo "yes"
1668 else
1669 echo "no"
1670 fi
1671 DEFINES="$DEFINES $IGNORE_TIME"
1672
1673 if test "x$EMBED_SRC" = xt ; then
1674 build_embed_encode
1675 fi
1676 if test "x$EMBED_SRC" = xt ; then
1677 ENABLE="$ENABLE embed_files"
1678 fi
1679
1680
1681 printf "\n=== Setting defaults ===\n"
1682 printf " Adding MODS directories: "
1683 for d in $MODS ; do
1684 if test ! -d $d ; then
1685 echo
1686 echo "Error: MODS directory \"$d\" not found!"
1687 exit 1
1688 else
1689 printf " $d"
1690 SOURCEDIRS="$SOURCEDIRS $d"
1691 INCLUDEDIRS="$INCLUDEDIRS $d"
1692 fi
1693 done
1694 echo
1695
1696 if test "x${PLATFORM}" = x ; then
1697 PLATFORM=$p_PLATFORM
1698 fi
1699
1700 if test "x${EXEDIR}" = x ; then
1701 tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1702 if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1703 EXEDIR=../exe
1704 else
1705 EXEDIR=.
1706 fi
1707 fi
1708 if test ! -d ${EXEDIR} ; then
1709 echo "Error: the specified EXEDIR (\"$EXEDIR\") does not exist!"
1710 exit 1
1711 fi
1712
1713 if test "x${TOOLSDIR}" = x ; then
1714 TOOLSDIR="$ROOTDIR/tools"
1715 fi
1716 if test ! -d ${TOOLSDIR} ; then
1717 echo "Error: the specified TOOLSDIR (\"$TOOLSDIR\") does not exist!"
1718 exit 1
1719 fi
1720 if test "x$S64" = x ; then
1721 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1722 RETVAL=$?
1723 if test "x${RETVAL}" = x0 ; then
1724 S64='$(TOOLSDIR)/set64bitConst.sh'
1725 else
1726 echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1727 RETVAL=$?
1728 if test "x${RETVAL}" = x0 ; then
1729 S64='$(TOOLSDIR)/set64bitConst.csh'
1730 else
1731 cat <<EOF
1732
1733 ERROR: neither of the two default scripts:
1734
1735 ${TOOLSDIR}/set64bitConst.sh
1736 ${TOOLSDIR}/set64bitConst.csh
1737
1738 are working so please check paths or specify (with \$S64) a
1739 working version of this script.
1740
1741 EOF
1742 exit 1
1743 fi
1744 fi
1745 fi
1746 THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1747
1748 EXECUTABLE=${EXECUTABLE:-mitgcmuv}
1749
1750 # We have a special set of source files in eesupp/src which are
1751 # generated from some template source files. We'll make them first so
1752 # they appear as regular source code
1753 if test -r $ROOTDIR"/eesupp/src/Makefile" ; then
1754 echo " Making source files in eesupp from templates"
1755 ( cd $ROOTDIR"/eesupp/src/" && $MAKE ) > make_eesupp.errors 2>&1
1756 RETVAL=$?
1757 if test "x${RETVAL}" = x0 ; then
1758 rm -f make_eesupp.errors
1759 else
1760 echo "Error: problem encountered while building source files in eesupp:"
1761 cat make_eesupp.errors 1>&2
1762 exit 1
1763 fi
1764 fi
1765
1766 #same for exch2
1767 if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then
1768 echo " Making source files in exch2 from templates"
1769 ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1
1770 RETVAL=$?
1771 if test "x${RETVAL}" = x0 ; then
1772 rm -f make_exch2.errors
1773 else
1774 echo "Error: problem encountered while building source files in exch2:"
1775 cat make_exch2.errors 1>&2
1776 exit 1
1777 fi
1778 fi
1779
1780 printf "\n=== Determining package settings ===\n"
1781 if test "x${PDEPEND}" = x ; then
1782 tmp=$ROOTDIR"/pkg/pkg_depend"
1783 if test -r $tmp ; then
1784 PDEPEND=$tmp
1785 else
1786 echo "Warning: No package dependency information was specified."
1787 echo " Please check that ROOTDIR/pkg/pkg_depend exists."
1788 fi
1789 else
1790 if test ! -r ${PDEPEND} ; then
1791 echo "Error: can't read package dependency info from PDEPEND=\"$PDEPEND\""
1792 exit 1
1793 fi
1794 fi
1795 echo " getting package dependency info from $PDEPEND"
1796 # Strip the comments and then convert the dependency file into
1797 # two arrays: PNAME, DNAME
1798 cat $PDEPEND | sed -e 's/#.*$//g' \
1799 | $AWK 'BEGIN{nn=-1;} (NF>0){ for(i=2;i<=NF;i++){nn++; print "PNAME_"nn"="$1"\nDNAME_"nn"="$i}} END{print "nname="nn}' \
1800 > ./.pd_tmp
1801 RETVAL=$?
1802 if test ! "x${RETVAL}" = x0 ; then
1803 echo "Error: unable to parse package dependencies -- please check PDEPEND=\"$PDEPEND\""
1804 exit 1
1805 fi
1806 . ./.pd_tmp
1807 rm -f ./.pd_tmp
1808
1809 # Search for default packages. Note that a "$ROOTDIR/pkg/pkg_groups"
1810 # file should eventually be added so that, for convenience, one can
1811 # specify groups of packages using names like "ocean" and "atmosphere".
1812 echo " checking default package list: "
1813 if test "x${PDEFAULT}" = x ; then
1814 for i in "." $MODS ; do
1815 if test -r $i"/packages.conf" ; then
1816 PDEFAULT=$i"/packages.conf"
1817 break
1818 fi
1819 done
1820 fi
1821 if test "x${PDEFAULT}" = x ; then
1822 PDEFAULT="$ROOTDIR/pkg/pkg_default"
1823 fi
1824 if test "x${PDEFAULT}" = xNONE ; then
1825 echo " default packages file disabled"
1826 else
1827 if test ! -r $PDEFAULT ; then
1828 echo "Warning: can't read default packages from PDEFAULT=\"$PDEFAULT\""
1829 else
1830 echo " using PDEFAULT=\"$PDEFAULT\""
1831 # Strip the comments and add all the names
1832 def=`cat $PDEFAULT | sed -e 's/#.*$//g' | $AWK '(NF>0){print $0}'`
1833 RETVAL=$?
1834 if test "x${RETVAL}" != x0 ; then
1835 printf "Error: can't parse default package list "
1836 echo "-- please check PDEFAULT=\"$PDEFAULT\""
1837 exit 1
1838 fi
1839 for i in $def ; do
1840 PACKAGES="$PACKAGES $i"
1841 done
1842 echo " before group expansion packages are: $PACKAGES"
1843 RET=1
1844 while test $RET = 1 ; do expand_pkg_groups; RET=$?; done
1845 echo " after group expansion packages are: $PACKAGES"
1846 fi
1847 fi
1848
1849 echo " applying DISABLE settings"
1850 for i in $PACKAGES ; do
1851 echo $i >> ./.tmp_pack
1852 done
1853 for i in `grep "-" ./.tmp_pack` ; do
1854 j=`echo $i | sed 's/[-]//'`
1855 DISABLE="$DISABLE $j"
1856 done
1857 pack=
1858 for p in $PACKAGES ; do
1859 addit="t"
1860 for d in $DISABLE ; do
1861 if test "x$p" = "x$d" ; then
1862 addit="f"
1863 fi
1864 done
1865 if test "x$addit" = xt ; then
1866 pack="$pack $p"
1867 fi
1868 done
1869 PACKAGES="$pack"
1870 echo " applying ENABLE settings"
1871 echo "" > ./.tmp_pack
1872 PACKAGES="$PACKAGES $ENABLE"
1873 # Test if each explicitly referenced package exists
1874 for i in $PACKAGES ; do
1875 j=`echo $i | sed 's/[-+]//'`
1876 if test ! -d "$ROOTDIR/pkg/$j" ; then
1877 echo "Error: can't find package $i at \"$ROOTDIR/pkg/$i\""
1878 exit 1
1879 fi
1880 echo $i >> ./.tmp_pack
1881 done
1882 PACKAGES=
1883 for i in `grep -v "-" ./.tmp_pack | sort | uniq` ; do
1884 PACKAGES="$PACKAGES $i"
1885 done
1886 rm -f ./.tmp_pack
1887 echo " packages are: $PACKAGES"
1888
1889 # Check availability of NetCDF and then either build the MNC template
1890 # files or delete mnc from the list of available packages.
1891 echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1892 RETVAL=$?
1893 if test "x$RETVAL" = x0 ; then
1894 if test "x$HAVE_NETCDF" != xt ; then
1895 cat <<EOF
1896
1897 *********************************************************************
1898 WARNING: the "mnc" package was enabled but tests failed to compile
1899 NetCDF applications. Please check that:
1900
1901 1) NetCDF is correctly installed for this compiler and
1902 2) the LIBS variable (within the "optfile") specifies the correct
1903 NetCDF library to link against.
1904
1905 Due to this failure, the "mnc" package is now DISABLED.
1906 *********************************************************************
1907
1908 EOF
1909 PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1910 DISABLE="$DISABLE mnc"
1911 else
1912 ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
1913 RETVAL=$?
1914 if test "x${RETVAL}" = x0 ; then
1915 rm -f make_mnc.errors
1916 else
1917 echo "Error: problem encountered while building source files in pkg/mnc:"
1918 cat make_mnc.errors 1>&2
1919 exit 1
1920 fi
1921 fi
1922 fi
1923
1924 echo " applying package dependency rules"
1925 ck=
1926 while test "x$ck" != xtt ; do
1927 i=0
1928 # rtot=${#PNAME[@]}
1929 rtot=$nname
1930 while test $i -lt $rtot ; do
1931
1932 # Is $pname in the current $PACKAGES list?
1933 # pname=${PNAME[$i]}
1934 tmp="pname=\"\$PNAME_$i\""
1935 eval $tmp
1936 pin="f"
1937 for p in $PACKAGES ; do
1938 if test "x$p" = "x$pname" ; then
1939 pin="t"
1940 fi
1941 done
1942
1943 # Is the DNAME entry a (+) or (-) rule ?
1944 tmp="dname=\"\$DNAME_$i\""
1945 eval $tmp
1946 plus="-"
1947 echo $dname | grep '^+' > /dev/null 2>&1
1948 RETVAL=$?
1949 if test "x$RETVAL" = x0 ; then
1950 plus="+"
1951 fi
1952
1953 # Is $dname in the current $PACKAGES list?
1954 dname=`echo $dname | sed -e 's/^[+-]//'`
1955 din="f"
1956 for p in $PACKAGES ; do
1957 if test "x$p" = "x$dname" ; then
1958 din="t"
1959 fi
1960 done
1961
1962 # Do we need to add $dname according to the dependency rules?
1963 if test "x$pin" = xt -a "x$plus" = "x+" -a "x$din" = xf ; then
1964 in_dis="f"
1965 for dis in $DISABLE ; do
1966 if test "x$dis" = "x$dname" ; then
1967 in_dis="t"
1968 fi
1969 done
1970 if test "x$in_dis" = xt ; then
1971 echo "Error: can't satisfy package dependencies:"
1972 echo " \"$dname\" is required by the dependency rules"
1973 echo " but is disallowed by the DISABLE settings"
1974 exit 1
1975 else
1976 PACKAGES="$PACKAGES $dname"
1977 ck=
1978 fi
1979 fi
1980
1981 # Do we need to get rid of $dname according to the dependency rules?
1982 if test "x$pin" = xt -a "x$plus" = "x-" -a "x$din" = xt; then
1983 echo "Error: can't satisfy package dependencies:"
1984 echo " \"$pname\" was requested but is disallowed by"
1985 echo " the dependency rules for \"$dname\""
1986 exit 1
1987 fi
1988 i=`echo "$i + 1" | bc -l`
1989 #i=$(( $i + 1 ))
1990 done
1991 ck=$ck"t"
1992 done
1993 echo " packages are: $PACKAGES"
1994 for i in $PACKAGES ; do
1995 adr="$ROOTDIR/pkg/$i"
1996 if test -d $adr ; then
1997 SOURCEDIRS="$SOURCEDIRS $adr"
1998 INCLUDEDIRS="$INCLUDEDIRS $adr"
1999 if test "x$i" = xautodiff ; then
2000 AUTODIFF_PKG_USED=t
2001 fi
2002 else
2003 echo "Error: the directory \"$adr\" for package $i doesn't exist"
2004 exit 1
2005 fi
2006 done
2007
2008 # Create a list of #define and #undef to enable/disable packages
2009 PACKAGES_DOT_H=PACKAGES_CONFIG.h
2010 # The following UGLY HACK sets multiple "#undef"s and it needs to go
2011 # away. On 2003-08-12, CNH, JMC, and EH3 agreed that the CPP_OPTIONS.h
2012 # file would eventually be split up so that all package-related #define
2013 # statements could be separated and handled only by genmake.
2014 names=`ls -1 "$ROOTDIR/pkg"`
2015 all_pack=
2016 DISABLED_PACKAGES=
2017 for n in $names ; do
2018 if test -d "$ROOTDIR/pkg/$n" -a "x$n" != xCVS ; then
2019 has_pack="f"
2020 for pack in $PACKAGES ; do
2021 if test "x$pack" = "x$n" ; then
2022 has_pack="t"
2023 break
2024 fi
2025 done
2026 if test "x$has_pack" = xf ; then
2027 undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2028 DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2029 fi
2030 fi
2031 done
2032 ENABLED_PACKAGES=
2033 for i in $PACKAGES ; do
2034 def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2035 ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2036 #eh3 DEFINES="$DEFINES -D$def"
2037
2038 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2039 case $i in
2040 aim_v23)
2041 ENABLED_PACKAGES="$ENABLED_PACKAGES -DALLOW_AIM"
2042 echo "Warning: ALLOW_AIM is set to enable aim_v23."
2043 ;;
2044 esac
2045 #EH3 WARNING : This is an UGLY HACK that needs to be removed!!!
2046
2047 done
2048
2049 echo " Adding STANDARDDIRS"
2050 BUILDDIR=${BUILDDIR:-.}
2051 if test "x$STANDARDDIRS" = xUSE_THE_DEFAULT ; then
2052 STANDARDDIRS="eesupp model"
2053 fi
2054 if test "x$STANDARDDIRS" != x ; then
2055 for d in $STANDARDDIRS ; do
2056 adr="$ROOTDIR/$d/src"
2057 if test ! -d $adr ; then
2058 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2059 echo " is correct and that you correctly specified the STANDARDDIRS option"
2060 exit 1
2061 else
2062 SOURCEDIRS="$SOURCEDIRS $adr"
2063 fi
2064 adr="$ROOTDIR/$d/inc"
2065 if test ! -d $adr ; then
2066 echo "Error: directory $adr not found -- please check that ROOTDIR=\"$ROOTDIR\""
2067 echo " is correct and that you correctly specified the STANDARDDIRS option"
2068 exit 1
2069 else
2070 INCLUDEDIRS="$INCLUDEDIRS $adr"
2071 fi
2072 done
2073 fi
2074
2075 echo " Searching for *OPTIONS.h files in order to warn about the presence"
2076 echo " of \"#define \"-type statements that are no longer allowed:"
2077 CPP_OPTIONS=
2078 CPP_EEOPTIONS=
2079 spaths=". $INCLUDEDIRS"
2080 names=`ls -1 "$ROOTDIR/pkg"`
2081 for i in $spaths ; do
2082 try="$i/CPP_OPTIONS.h"
2083 if test -f $try -a -r $try -a "x$CPP_OPTIONS" = x ; then
2084 echo " found CPP_OPTIONS=\"$try\""
2085 CPP_OPTIONS="$try"
2086 # New safety test: make sure packages are not mentioned in CPP_OPTIONS.h
2087 for n in $names ; do
2088 test_for_package_in_cpp_options $CPP_OPTIONS $n
2089 done
2090 fi
2091 try="$i/CPP_EEOPTIONS.h"
2092 if test -f $try -a -r $try -a "x$CPP_EEOPTIONS" = x ; then
2093 echo " found CPP_EEOPTIONS=\"$try\""
2094 # New safety test: make sure MPI is not determined by CPP_EEOPTIONS.h
2095 #**** not yet enabled ****
2096 # test_for_mpi_in_cpp_eeoptions $try
2097 #**** not yet enabled ****
2098 CPP_EEOPTIONS="$try"
2099 fi
2100 done
2101 if test "x$CPP_OPTIONS" = x ; then
2102 echo "Error: can't find \"CPP_OPTIONS.h\" in the path list: $spaths"
2103 exit 1
2104 fi
2105
2106 # Here, we build the list of files to be "run through" the adjoint
2107 # compiler.
2108 if test -f ./ad_files ; then
2109 rm -f ./ad_files
2110 fi
2111 echo " Creating the list of files for the adjoint compiler."
2112 for i in $SOURCEDIRS ; do
2113 list_files=`( cd $i && ls -1 *.list 2>/dev/null )`
2114 for j in $list_files ; do
2115 cat $i/$j >> ad_files
2116 done
2117 done
2118 if test ! "x"$FS = "x.f" ; then
2119 cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f
2120 mv -f ad_files_f ad_files
2121 fi
2122
2123 echo
2124 echo "=== Creating the Makefile ==="
2125 echo " setting INCLUDES"
2126 for i in $INCLUDEDIRS ; do
2127 if test ! -d $i ; then
2128 echo "Warning: can't find INCLUDEDIRS=\"$i\""
2129 fi
2130 done
2131
2132 if test ! "x$DIVA" = x ; then
2133 echo " Creating the pseudo-MPI include directory"
2134 INCLUDES="-I./mpi_headers $INCLUDES"
2135 rm -rf ./mpi_headers
2136 mkdir -p ./mpi_headers
2137
2138 if test "x$MPIINCLUDEDIR" = x ; then
2139 if test "x$MPIHOME" = x ; then
2140 MPIHOME='/usr'
2141 fi
2142 MPIINCLUDEDIR='$MPIHOME/include'
2143 fi
2144
2145 if test -r $MPIINCLUDEDIR/mpif.h ; then
2146 for i in $MPI_HEADER_FILES; do
2147 cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2148 done
2149
2150 perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2151 else
2152 echo " We cannot create a copy of mpif.h!"
2153 exit -1
2154 fi
2155 fi
2156
2157 echo " Determining the list of source and include files"
2158 rm -rf .links.tmp
2159 mkdir .links.tmp
2160 touch .links.tmp/foo
2161 if test ! -r ".links.tmp/foo" ; then
2162 echo
2163 echo "ERROR : something is wrong with your directory permissions or"
2164 echo " your user file-creation mask (\"umask\") since creating a"
2165 echo " sub-dir, touch-ing a file within it, and then reading it is"
2166 echo " not working. Please try setting your umask to something"
2167 echo " sane such as:"
2168 echo
2169 echo " umask 0002"
2170 echo
2171 echo " and please verify that you have the proper permissions for"
2172 echo " creating sub-directories and then reading files created"
2173 echo " within them."
2174 echo
2175 exit 1
2176 fi
2177 rm -f .links.tmp/foo
2178 echo "# This section creates symbolic links" > srclinks.tmp
2179 echo "" >> srclinks.tmp
2180 printf 'SRCFILES = ' > srclist.inc
2181 printf 'CSRCFILES = ' > csrclist.inc
2182 printf 'F90SRCFILES = ' > f90srclist.inc
2183 printf 'HEADERFILES = ' > hlist.inc
2184 printf 'AD_FLOW_FILES = ' > ad_flow_files.inc
2185 alldirs="$SOURCEDIRS $INCLUDEDIRS ."
2186 for d in $alldirs ; do
2187 deplist=
2188 sfiles=`( cd $d; echo *.[h,c,F] *.flow )`
2189 sfiles=`( echo $sfiles; cd $d; echo *.F90 )`
2190 for sf in $sfiles ; do
2191 if test ! -r ".links.tmp/$sf" ; then
2192 if test -f "$d/$sf" ; then
2193 ignore_f=f
2194 case $d/$sf in
2195 ./$PACKAGES_DOT_H)
2196 ignore_f=t
2197 ;;
2198 ./AD_CONFIG.h)
2199 ignore_f=t
2200 ;;
2201 ./FC_NAMEMANGLE.h)
2202 ignore_f=t
2203 ;;
2204 ./BUILD_INFO.h)
2205 ignore_f=t
2206 ;;
2207 ./EMBEDDED_FILES.h)
2208 ignore_f=t
2209 ;;
2210 *)
2211 # For the local directory *ONLY*,
2212 # ignore all soft-links
2213 if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2214 ignore_f=t
2215 else
2216 touch .links.tmp/$sf
2217 deplist="$deplist $sf"
2218 fi
2219 ;;
2220 esac
2221 if test "x$ignore_f" = xf ; then
2222 extn=`echo $sf | $AWK -F. '{print $NF}'`
2223 case $extn in
2224 F)
2225 echo " \\" >> srclist.inc
2226 printf " $sf" >> srclist.inc
2227 ;;
2228 F90)
2229 echo " \\" >> f90srclist.inc
2230 printf " $sf" >> f90srclist.inc
2231 ;;
2232 c)
2233 echo " \\" >> csrclist.inc
2234 printf " $sf" >> csrclist.inc
2235 ;;
2236 h)
2237 echo " \\" >> hlist.inc
2238 printf " $sf" >> hlist.inc
2239 ;;
2240 flow)
2241 echo " \\" >> ad_flow_files.inc
2242 printf " $sf" >> ad_flow_files.inc
2243 ;;
2244 esac
2245 fi
2246 fi
2247 fi
2248 done
2249 if test "x$deplist" != x ; then
2250 echo "" >> srclinks.tmp
2251 echo "# These files are linked from $d" >> srclinks.tmp
2252 echo "$deplist :" >> srclinks.tmp
2253 printf "\t\$(LN) %s/\$@ \$@\n" $d >> srclinks.tmp
2254 fi
2255 done
2256 rm -rf .links.tmp
2257 echo "" >> srclist.inc
2258 echo "" >> csrclist.inc
2259 echo "" >> f90srclist.inc
2260 echo "" >> hlist.inc
2261 echo "" >> ad_flow_files.inc
2262
2263 if test -f $MAKEFILE ; then
2264 mv -f $MAKEFILE "$MAKEFILE.bak"
2265 fi
2266 echo " Writing makefile: $MAKEFILE"
2267 echo "# Multithreaded + multi-processing makefile for:" > $MAKEFILE
2268 echo "# $MACHINE" >> $MAKEFILE
2269 echo "# This makefile was generated automatically on" >> $MAKEFILE
2270 echo "# $THISDATE" >> $MAKEFILE
2271 echo "# by the command:" >> $MAKEFILE
2272 echo "# $0 $G2ARGS" >> $MAKEFILE
2273 echo "# executed by:" >> $MAKEFILE
2274 echo "# ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2275
2276 EXE_AD=$EXECUTABLE"_ad"
2277 EXE_FTL=$EXECUTABLE"_ftl"
2278 EXE_SVD=$EXECUTABLE"_svd"
2279
2280 cat >>$MAKEFILE <<EOF
2281 #
2282 # OPTFILE="$OPTFILE"
2283 #
2284 # BUILDDIR : Directory where object files are written
2285 # SOURCEDIRS : Directories containing the source (.F) files
2286 # INCLUDEDIRS : Directories containing the header-source (.h) files
2287 # EXEDIR : Directory where executable that is generated is written
2288 # EXECUTABLE : Full path of executable binary
2289 #
2290 # CPP : C-preprocessor command
2291 # INCLUDES : Directories searched for header files
2292 # DEFINES : Macro definitions for CPP
2293 # MAKEDEPEND : Dependency generator
2294 # KPP : Special preprocessor command (specific to platform)
2295 # KFLAGS : Flags for KPP
2296 # FC : Fortran compiler command
2297 # FFLAGS : Configuration/debugging options for FC
2298 # FOPTIM : Optimization options for FC
2299 # LINK : Command for link editor program
2300 # LIBS : Library flags /or/ additional optimization/debugging flags
2301
2302 ROOTDIR = ${ROOTDIR}
2303 BUILDDIR = ${BUILDDIR}
2304 SOURCEDIRS = ${SOURCEDIRS}
2305 INCLUDEDIRS = ${INCLUDEDIRS}
2306 EXEDIR = ${EXEDIR}
2307 EXECUTABLE = \$(EXEDIR)/${EXECUTABLE}
2308 TOOLSDIR = ${TOOLSDIR}
2309
2310 #eh3 new defines for the adjoint work
2311 AUTODIFF = ${ROOTDIR}/pkg/autodiff
2312 EXE_AD = ${EXE_AD}
2313 EXE_FTL = ${EXE_FTL}
2314 EXE_SVD = ${EXE_SVD}
2315
2316 ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2317 DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2318
2319 # These files are created by Makefile
2320 SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
2321 EOF
2322
2323 if test "x$EMBED_SRC" = xt ; then
2324 echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2325 else
2326 echo "EMBEDDED_FILES = " >>$MAKEFILE
2327 fi
2328
2329 # Note: figure out some way to add Hyades JAM libraries here
2330 cat >>$MAKEFILE <<EOF
2331 # Unix ln (link)
2332 LN = ${LN}
2333 # C preprocessor
2334 CPP = cat \$< | ${S64} | ${CPP}
2335 # Dependency generator
2336 MAKEDEPEND = ${MAKEDEPEND}
2337 # Special preprocessor (KAP on DECs, FPP on Crays)
2338 KPP = ${KPP}
2339 # Fortran compiler
2340 FC = ${FC}
2341 # Fortran compiler
2342 F90C = ${F90C}
2343 # C compiler
2344 CC = ${CC}
2345 # Link editor
2346 LINK = ${LINK} ${LDADD}
2347
2348 # Defines for CPP
2349 DEFINES = ${DEFINES}
2350 # Includes for CPP
2351 INCLUDES = ${INCLUDES}
2352 # Flags for KPP
2353 KFLAGS1 = ${KFLAGS1}
2354 KFLAGS2 = ${KFLAGS2}
2355 # Optim./debug for FC
2356 FFLAGS = ${FFLAGS}
2357 FOPTIM = ${FOPTIM}
2358 # Optim./debug for FC
2359 F90FLAGS = ${F90FLAGS}
2360 F90OPTIM = ${F90OPTIM}
2361 # Flags for CC
2362 CFLAGS = ${CFLAGS}
2363 # Files that should not be optimized
2364 NOOPTFILES = ${NOOPTFILES}
2365 NOOPTFLAGS = ${NOOPTFLAGS}
2366 # Flags and libraries needed for linking
2367 LIBS = ${LIBS}
2368 # Name of the Mekfile
2369 MAKEFILE=${MAKEFILE}
2370
2371 EOF
2372
2373 cat srclist.inc >> $MAKEFILE
2374 cat csrclist.inc >> $MAKEFILE
2375 cat f90srclist.inc >> $MAKEFILE
2376 cat hlist.inc >> $MAKEFILE
2377 cat ad_flow_files.inc >> $MAKEFILE
2378 echo >> $MAKEFILE
2379 echo 'F77FILES = $(SRCFILES:.F=.'$FS')' >> $MAKEFILE
2380 echo 'F90FILES = $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE
2381 echo 'OBJFILES = $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
2382 echo >> $MAKEFILE
2383 echo '.SUFFIXES:' >> $MAKEFILE
2384 echo '.SUFFIXES: .o .'$FS' .p .F .c .'$FS90' .F90' >> $MAKEFILE
2385 rm -f srclist.inc csrclist.inc hlist.inc flist.tmp clist.tmp f90srclist.inc
2386 rm -f ad_flow_files.inc
2387
2388 cat >>$MAKEFILE <<EOF
2389
2390 all: \$(EXECUTABLE)
2391 \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2392 @echo Creating \$@ ...
2393 \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2394 depend:
2395 @make links
2396 \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(SRCFILES)
2397 \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2398 -rm -f makedepend.out
2399
2400 lib: libmitgcmuv.a
2401
2402 libmitgcmuv.a: \$(OBJFILES)
2403 ar rcv libmitgcmuv.a \$(OBJFILES)
2404
2405 links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2406
2407 small_f: \$(F77FILES) \$(F90FILES)
2408
2409 output.txt: \$(EXECUTABLE)
2410 @printf 'running ... '
2411 @\$(EXECUTABLE) > \$@
2412
2413 clean:
2414 -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2415 Clean:
2416 @make clean
2417 @make cleanlinks
2418 -rm -f \$(SPECIAL_FILES)
2419 -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
2420 CLEAN:
2421 @make Clean
2422 -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2423 -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2424 -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2425 -rm -f \$(EXECUTABLE) output.txt STD*
2426
2427 #eh3 Makefile: makefile
2428 makefile:
2429 $THIS_SCRIPT $G2ARGS
2430 cleanlinks:
2431 -find . -type l -exec rm {} \;
2432
2433 # Special targets (SPECIAL_FILES) which are create by make
2434 ${PACKAGES_DOT_H}:
2435 @echo Creating \$@ ...
2436 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
2437 AD_CONFIG.h:
2438 @echo Creating \$@ ...
2439 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bAD_CONFIG_H -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > \$@
2440 FC_NAMEMANGLE.h:
2441 @echo Creating \$@ ...
2442 echo "$FC_NAMEMANGLE" > \$@
2443
2444 BUILD_INFO.h:
2445 @echo Creating \$@ ...
2446 EOF
2447
2448 test ! "x$THISVER" = x && echo " -echo \"#define THISVER '$THISVER'\" > \$@" >> $MAKEFILE
2449 test ! "x$THISUSER" = x && echo " -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2450 test ! "x$THISDATE" = x && echo " -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2451 test ! "x$THISHOST" = x && echo " -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2452
2453 if test "x$EMBED_SRC" = xt ; then
2454 cat >>$MAKEFILE <<EOF
2455
2456 decode_files.o : EMBEDDED_FILES.h
2457
2458 ## \$(F77FILES)
2459 all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2460 @echo Creating \$@ ...
2461 -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2462 -rm -f all_fF.tar.gz
2463 -gzip all_fF.tar
2464
2465 EMBEDDED_FILES.h : all_fF.tar.gz
2466 @echo Creating \$@ ...
2467 -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2468
2469 EOF
2470 fi
2471
2472 cat >>$MAKEFILE <<EOF
2473
2474 # The normal chain of rules is ( .F - .$FS - .o )
2475
2476 ## This nullifies any default implicit rules concerning these two file types:
2477 ## %.o : %.F
2478
2479 .F.$FS:
2480 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2481 .$FS.o:
2482 \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2483 .F90.$FS90:
2484 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2485 .$FS90.o:
2486 \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2487 .c.o:
2488 \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2489
2490 # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2491 .F.p:
2492 \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2493 .p.$FS:
2494 \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
2495
2496 #=========================================
2497 #=== Automatic Differentiation Rules ===
2498
2499 TAMC = ${TAMC}
2500 TAF = ${TAF}
2501
2502 TAF_EXTRA = ${TAF_EXTRA}
2503 TAMC_EXTRA = ${TAMC_EXTRA}
2504
2505 EOF
2506
2507 ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
2508 ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
2509 ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2510 for i in $ad_vars ; do
2511 name=$i
2512 t1="t2=\$"`echo $i`
2513 eval $t1
2514 printf "%-20s = " $name >> $MAKEFILE
2515 echo $t2 >> $MAKEFILE
2516 done
2517
2518 echo " Add the source list for AD code generation"
2519 echo >> $MAKEFILE
2520 printf "AD_FILES = " >> $MAKEFILE
2521 AD_FILES=`cat ad_files`
2522 for i in $AD_FILES ; do
2523 echo " \\" >> $MAKEFILE
2524 printf " $i" >> $MAKEFILE
2525 done
2526 echo >> $MAKEFILE
2527 rm -f ad_files
2528
2529 cat >>$MAKEFILE <<EOF
2530
2531 # ... AD ...
2532 adall: ad_taf
2533 adtaf: ad_taf_output.$FS
2534 adtamc: ad_tamc_output.$FS
2535
2536 ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2537 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2538 cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2539 -rm -f ad_config.template
2540 @make \$(F77FILES)
2541 @make \$(AD_FLOW_FILES)
2542 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS
2543
2544 ad_taf_output.$FS: ad_input_code.$FS
2545 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2546 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2547
2548 adtafonly:
2549 \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2550 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2551
2552 ad_taf: ad_taf_output.o \$(OBJFILES)
2553 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2554
2555 ad_tamc_output.$FS: ad_input_code.$FS
2556 \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2557 cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2558
2559 ad_tamc: ad_tamc_output.o \$(OBJFILES)
2560 \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2561
2562 adonlyfwd:
2563 patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2564
2565 adtrick:
2566 patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2567
2568 # ... FTL ...
2569 ftlall: ftl_taf
2570 ftltaf: ftl_taf_output.$FS
2571 ftltamc: ftl_tamc_output.$FS
2572
2573 ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2574 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2575 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2576 -rm -f ftl_config.template
2577 @make \$(F77FILES)
2578 @make \$(AD_FLOW_FILES)
2579 cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2580
2581 ftl_taf_output.$FS: ftl_input_code.$FS
2582 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2583 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2584
2585 ftltafonly:
2586 \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2587 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2588
2589 ftl_taf: ftl_taf_output.o \$(OBJFILES)
2590 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2591
2592 ftl_tamc_output.$FS: ftl_input_code.$FS
2593 \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2594 cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2595
2596 ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2597 \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2598
2599
2600 # ... SVD ...
2601 svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2602 @echo "--->>> Only ran TAF to generate SVD code! <<<---"
2603 @echo "--->>> Do make svdall afterwards to compile. <<<---"
2604 svdall: svd_touch svd_taf
2605
2606 svd_taf: \$(OBJFILES)
2607 \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2608
2609 @echo "--->>> Only COMPILE svd code! <<<---"
2610 @echo "--->>> Assumes you previously <<<---"
2611 @echo "--->>> did make svdtaf <<<---"
2612
2613 svd_touch:
2614 @echo "--->>> Only COMPILE svd code! <<<---"
2615 @echo "--->>> Assumes you previously <<<---"
2616 @echo "--->>> did make svdtaf <<<---"
2617 touch ad_taf_output.$FS ftl_taf_output.$FS
2618 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2619 \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2620 @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2621 cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2622 -rm -f ftl_config.template
2623
2624 #=========================================
2625
2626 EOF
2627
2628 if test "x$EXEHOOK" != x ; then
2629 printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
2630 fi
2631
2632 echo " Making list of \"exceptions\" that need \".p\" files"
2633 for i in $KPPFILES ; do
2634 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
2635 RETVAL=$?
2636 if test "x$RETVAL" != x0 ; then
2637 echo "Error: unable to add file \"$i\" to the exceptions list"
2638 fi
2639 echo "$base.$FS: $base.p" >> $MAKEFILE
2640 done
2641
2642 echo " Making list of NOOPTFILES"
2643 for i in $NOOPTFILES ; do
2644 base=`echo $i | sed -e 's/\/.*\///g' | sed -e 's/\..*$//g'`
2645 RETVAL=$?
2646 if test "x$RETVAL" != x0 ; then
2647 echo "Error: unable to add file \"$i\" to the exceptions list"
2648 fi
2649 echo "$base.o: $base.$FS" >> $MAKEFILE
2650 printf "\t\$(FC) \$(FFLAGS) \$(NOOPTFLAGS) -c \$<\n" >> $MAKEFILE
2651 done
2652
2653 echo " Add rules for links"
2654 cat srclinks.tmp >> $MAKEFILE
2655 rm -f srclinks.tmp
2656
2657 echo " Adding makedepend marker"
2658 printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
2659
2660 printf "\n=== Done ===\n"
2661
2662 # Create special header files
2663 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" $DISABLED_PACKAGES " " "Enabled packages:" $ENABLED_PACKAGES > $PACKAGES_DOT_H".tmp"
2664 if test ! -f $PACKAGES_DOT_H ; then
2665 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2666 else
2667 cmp $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H > /dev/null 2>&1
2668 RETVAL=$?
2669 if test "x$RETVAL" = x0 ; then
2670 rm -f $PACKAGES_DOT_H".tmp"
2671 else
2672 mv -f $PACKAGES_DOT_H $PACKAGES_DOT_H".bak"
2673 mv -f $PACKAGES_DOT_H".tmp" $PACKAGES_DOT_H
2674 fi
2675 fi
2676 if test ! -f AD_CONFIG.h ; then
2677 $BASH $TOOLSDIR/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > AD_CONFIG.h
2678 fi
2679
2680
2681 # Write the "state" for future records
2682 if test "x$DUMPSTATE" != xf ; then
2683 printf "" > genmake_state
2684 for i in $gm_state ; do
2685 t1="t2=\$$i"
2686 eval $t1
2687 echo "$i='$t2'" >> genmake_state
2688 done
2689 fi

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