/[MITgcm]/MITgcm/tools/genmake2
ViewVC logotype

Diff of /MITgcm/tools/genmake2

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.92 by edhill, Fri Jul 30 15:59:33 2004 UTC revision 1.161 by jmc, Sun Feb 18 21:39:59 2007 UTC
# Line 13  Line 13 
13  test_for_package_in_cpp_options() {  test_for_package_in_cpp_options() {
14      cpp_options=$1      cpp_options=$1
15      pkg=$2      pkg=$2
16      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg[ ]"
17      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg[ ]"
18      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg[ ]"
19      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg[ ]"
20        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_$pkg$"
21        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_$pkg$"
22        test_for_string_in_file $cpp_options "^[ ]*#define.*DISABLE_$pkg$"
23        test_for_string_in_file $cpp_options "^[ ]*#undef.*DISABLE_$pkg$"
24  }  }
25    
26  # Search for particular CPP #cmds associated with MPI  # Search for particular CPP #cmds associated with MPI
27  # usage: test_for_mpi_in_cpp_eeoptions CPP_file  # usage: test_for_mpi_in_cpp_eeoptions CPP_file
28  test_for_mpi_in_cpp_eeoptions() {  test_for_mpi_in_cpp_eeoptions() {
29      cpp_options=$1      cpp_options=$1
30      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI[ ]"
31      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI[ ]"
32      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI[ ]"
33      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI" || exit 99      test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI[ ]"
34        test_for_string_in_file $cpp_options "^[ ]*#define.*ALLOW_USE_MPI$"
35        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALLOW_USE_MPI$"
36        test_for_string_in_file $cpp_options "^[ ]*#define.*ALWAYS_USE_MPI$"
37        test_for_string_in_file $cpp_options "^[ ]*#undef.*ALWAYS_USE_MPI$"
38  }  }
39    
40  # Search for particular string in a file. Return 1 if detected, 0 if not  # Search for particular string in a file. Return 1 if detected, 0 if not
# Line 39  test_for_string_in_file() { Line 47  test_for_string_in_file() {
47      if test "x${RETVAL}" = x0 ; then      if test "x${RETVAL}" = x0 ; then
48          printf "Error: In $file there is an illegal line: "          printf "Error: In $file there is an illegal line: "
49          grep -i "$strng" $file          grep -i "$strng" $file
50          return 1          exit 99
51      fi      fi
52      return 0      return 0
53  }  }
# Line 122  EOF Line 130  EOF
130        stop        stop
131        end        end
132  EOF  EOF
133      test -f Makefile  &&  mv -f Makefile Makefile.bak      test -f $MAKEFILE  &&  mv -f $MAKEFILE $MAKEFILE".tst"
134      cat <<EOF >> Makefile      cat <<EOF >> $MAKEFILE
 %.$tfs : %.F  
135  .SUFFIXES:  .SUFFIXES:
136  genmake_hello.$tfs: genmake_hello.F  .SUFFIXES: .$tfs .F
137          $LN genmake_hello.F genmake_hello.$tfs  .F.$tfs:
138            $LN \$< \$@
139  EOF  EOF
140      $MAKE "genmake_hello."$tfs > /dev/null 2>&1      $MAKE "genmake_hello."$tfs > /dev/null 2>&1
141      RETVAL=$?      RETVAL=$?
# Line 148  EOF Line 156  EOF
156              return              return
157          fi          fi
158      fi      fi
159      rm -f genmake_hello.* Makefile      rm -f genmake_hello.* $MAKEFILE
160      test -f Makefile  &&  mv -f Makefile.bak Makefile      test -f $MAKEFILE".tst"  &&  mv -f $MAKEFILE".tst" $MAKEFILE
161    
162      #  If we make it here, use the extensions      #  If we make it here, use the extensions
163      FS=$tfs      FS=$tfs
# Line 181  look_for_makedepend()  { Line 189  look_for_makedepend()  {
189      if test "x${MAKEDEPEND}" = x ; then      if test "x${MAKEDEPEND}" = x ; then
190          which makedepend > /dev/null 2>&1          which makedepend > /dev/null 2>&1
191          RV0=$?          RV0=$?
192            test -f $MAKEFILE  &&  mv -f $MAKEFILE $MAKEFILE".tst"
193            #  echo 'MAKEFILE="'$MAKEFILE'"'
194            cat <<EOF >> $MAKEFILE
195    #   THIS IS A TEST MAKEFILE GENERATED BY "genmake2"
196    #
197    #   Some "makedepend" implementations will die if they cannot
198    #   find a Makefile -- so this file is here to gives them an
199    #   empty one to find and parse.
200    EOF
201          cat <<EOF >> genmake_tc.f          cat <<EOF >> genmake_tc.f
202        program test        program test
203        write(*,*) 'test'        write(*,*) 'test'
# Line 189  look_for_makedepend()  { Line 206  look_for_makedepend()  {
206  EOF  EOF
207          makedepend genmake_tc.f > /dev/null 2>&1          makedepend genmake_tc.f > /dev/null 2>&1
208          RV1=$?          RV1=$?
209            test -f $MAKEFILE  &&  rm -f $MAKEFILE
210            test -f $MAKEFILE".tst"  &&  mv -f $MAKEFILE".tst" $MAKEFILE
211          if test "x${RV0}${RV1}" = x00 ; then          if test "x${RV0}${RV1}" = x00 ; then
212              MAKEDEPEND=makedepend              MAKEDEPEND=makedepend
213          else          else
# Line 237  build_cyrus_makedepend()  { Line 256  build_cyrus_makedepend()  {
256      fi      fi
257  }  }
258    
259    
260    build_embed_encode()
261    {
262        printf "  building the embed-encode utility...  "
263        if test ! -e "$ROOTDIR/tools/embed_encode/encode_files" ; then
264            if test ! -d "$ROOTDIR/tools/embed_encode" ; then
265                echo
266                echo "    Error: can't locate \"$ROOTDIR/tools/embed_encode\""
267                echo
268                EMBED_SRC=f
269                return 1
270            fi
271            clist="cc gcc c89 $CC"
272            for ic in $clist ; do
273                comm="$ic -o encode_files encode_files.c"
274                ( cd $ROOTDIR/tools/embed_encode && $comm ) > /dev/null 2>&1
275                RETVAL=$?
276                if test "x$RETVAL" = x0 ; then
277                    echo "OK"
278                    DEFINES="$DEFINES -DHAVE_EMBED_SRC"
279                    return 0
280                fi
281            done
282            echo
283            echo "    Error: unable to build $ROOTDIR/embed_encode/encode_files"
284            echo "      so it has been disabled"
285            echo
286            EMBED_SRC=f
287            return 1
288        fi
289        echo "OK"
290        DEFINES="$DEFINES -DHAVE_EMBED_SRC"
291    }
292    
293    
294  # Guess possible config options for this host  # Guess possible config options for this host
295  find_possible_configs()  {  find_possible_configs()  {
296    
# Line 271  find_possible_configs()  { Line 325  find_possible_configs()  {
325    
326      #================================================================      #================================================================
327      #  look for possible C compilers      #  look for possible C compilers
328      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc"      tmp="$MITGCM_CC $CC gcc c89 cc c99 mpicc icc"
329      p_CC=      p_CC=
330      for c in $tmp ; do      for c in $tmp ; do
331          rm -f ./genmake_hello.c  ./genmake_hello          rm -f ./genmake_hello.c  ./genmake_hello
# Line 310  EOF Line 364  EOF
364    
365      #================================================================      #================================================================
366      #  look for possible FORTRAN compilers      #  look for possible FORTRAN compilers
367      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc f90 f95 mpif77 mpf77 mpxlf95"      tmp="$MITGCM_FC $FC efc g77 f77 pgf77 pgf95 ifc ifort f90 f95 mpif77 mpf77 mpxlf95 gfortran g95"
368      p_FC=      p_FC=
369      for c in $tmp ; do      for c in $tmp ; do
370          rm -f ./hello.f ./hello          rm -f ./hello.f ./hello
# Line 342  EOF Line 396  EOF
396      else      else
397          echo "  The possible FORTRAN compilers found in your path are:"          echo "  The possible FORTRAN compilers found in your path are:"
398          echo "   "$p_FC          echo "   "$p_FC
399          if test "x$FC" = x ; then      fi
400              FC=`echo $p_FC | $AWK '{print $1}'`  
401              echo "  Setting FORTRAN compiler to: "$FC      #  Use the first of the compilers found in the current PATH
402          fi      #  that has a correctly-named optfile
403        if test "x$OPTFILE" = x  -a  "x$FC" = x ; then
404            for i in $p_FC ; do
405                OPTFILE=$ROOTDIR"/tools/build_options/"$PLATFORM"_"$i
406                if test -r $OPTFILE ; then
407                    echo "  Setting OPTFILE to: "$OPTFILE
408                    break
409                fi
410            done
411      fi      fi
412    
413      if test "x$OPTFILE" = x ; then      if test "x$OPTFILE" = x ; then
# Line 516  Usage: "$0" [OPTIONS] Line 578  Usage: "$0" [OPTIONS]
578            *only* works if it is supported by the OPTFILE that            *only* works if it is supported by the OPTFILE that
579            is being used.            is being used.
580    
581        -ignoretime | -ignore_time | --ignoretime | --ignore_time
582              Ignore all the "wall clock" routines entirely.  This will
583              not in any way hurt the model results -- it simply means
584              that the code that checks how long the model spends in
585              various routines will give junk values.
586    
587        -ts | --ts
588              Produce timing information per timestep
589        -papis | --papis
590              Produce summary MFlop/s (and IPC) with PAPI per timestep
591        -pcls | --pcls
592              Produce summary MFlop/s etc. with PCL per timestep
593        -foolad | --foolad
594              Fool the AD code generator
595        -papi | --papi
596              Performance analysis with PAPI
597        -pcl | --pcl
598              Performance analysis with PCL
599        -hpmt | --hpmt
600              Performance analysis with the HPM Toolkit
601    
602        -gsl | --gsl
603              Use GSL to control floating point rounding and precision
604        -devel | --devel
605              Add additional warning and debugging flags for development
606    
607      -mpi | --mpi      -mpi | --mpi
608            Include MPI header files and link to MPI libraries            Include MPI header files and link to MPI libraries
609      -mpi=PATH | --mpi=PATH      -mpi=PATH | --mpi=PATH
610            Include MPI header files and link to MPI libraries using MPI_ROOT            Include MPI header files and link to MPI libraries using MPI_ROOT
611            set to PATH. i.e. Include files from $PATH/include, link to libraries            set to PATH. i.e. Include files from \$PATH/include, link to libraries
612            from $PATH/lib and use binaries from $PATH/bin.            from \$PATH/lib and use binaries from \$PATH/bin.
613    
614        -es | --es | -embed-source | --embed-source
615              Embed a tarball containing the full source code
616              (including the Makefile, etc.) used to build the
617              executable [off by default]
618    
619      -bash NAME      -bash NAME
620            Explicitly specify the Bourne or BASH shell to use            Explicitly specify the Bourne or BASH shell to use
# Line 581  WARNING: Please contact <MITgcm-support@ Line 674  WARNING: Please contact <MITgcm-support@
674  EOF  EOF
675          return 1          return 1
676      fi      fi
677      cat > genmake_tcomp.f <<EOF      cat > genmake_tcomp.$FS <<EOF
678        subroutine tcall( string )        subroutine tcall( string )
679        character*(*) string        character*(*) string
680        call tsub( string )        call tsub( string )
681        end        end
682  EOF  EOF
683      $FC $FFLAGS $DEFINES -c genmake_tcomp.f >> genmake_warnings 2>&1      $FC $FFLAGS -c genmake_tcomp.$FS >> genmake_warnings 2>&1
684      RETVAL=$?      RETVAL=$?
685      if test "x$RETVAL" != x0 ; then      if test "x$RETVAL" != x0 ; then
686          FC_NAMEMANGLE=$default_nm          FC_NAMEMANGLE=$default_nm
# Line 653  void FC_NAMEMANGLE(cloc) ( double *curti Line 746  void FC_NAMEMANGLE(cloc) ( double *curti
746   *curtim = *curtim/1.E6;   *curtim = *curtim/1.E6;
747  }  }
748  EOF  EOF
749      make genmake_tc_1.o >> genmake_tc.log 2>&1      make genmake_tc_1.o >> genmake_warnings 2>&1
750      RET_C=$?      RET_C=$?
751      cat <<EOF > genmake_tc_2.f      cat <<EOF > genmake_tc_2.$FS
752        program hello        program hello
753        Real*8 wtime        REAL*8 wtime
754        external cloc        external cloc
755        call cloc(wtime)        call cloc(wtime)
756        print *," HELLO WORLD", wtime        print *," HELLO WORLD", wtime
757        end program hello        end
758  EOF  EOF
759      $FC $FFLAGS -o genmake_tc genmake_tc_2.f genmake_tc_1.o >> genmake_tc.log 2>&1      $FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o >> genmake_warnings 2>&1
760      RET_F=$?      RET_F=$?
761      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_tc.log 2>&1      test -x ./genmake_tc  &&  ./genmake_tc >> genmake_warnings 2>&1
762      RETVAL=$?      RETVAL=$?
763      if test "x$RETVAL" = x0 ; then      if test "x$RETVAL" = x0 ; then
764          HAVE_CLOC=t          HAVE_CLOC=t
# Line 675  EOF Line 768  EOF
768  }  }
769    
770    
771    check_HAVE_SIGREG()  {
772        if test ! "x$HAVE_SIGREG" = x ; then
773            return
774        fi
775        get_fortran_c_namemangling
776        cat <<EOF > genmake_tc_1.c
777    $FC_NAMEMANGLE
778    #include <stdlib.h>
779    #include <stdio.h>
780    #include <signal.h>
781    #include <errno.h>
782    #include <ucontext.h>
783    
784    int * ip;
785    
786    static void killhandler(
787        unsigned int sn, siginfo_t  si, struct ucontext *sc )
788    {
789        *ip = *ip + 1;
790        return;
791    }
792    
793    void FC_NAMEMANGLE(sigreg) (int * aip)
794    {
795        struct sigaction s;
796        ip = aip;
797        s.sa_flags = SA_SIGINFO;
798        s.sa_sigaction = (void *)killhandler;
799        if(sigaction (SIGTERM,&s,(struct sigaction *)NULL)) {
800            printf("Sigaction returned error = %d\n", errno);
801            exit(0);
802        }
803        return;
804    }
805    EOF
806        make genmake_tc_1.o >> genmake_warnings 2>&1
807        RET_C=$?
808        cat <<EOF > genmake_tc_2.$FS
809          program hello
810          integer anint
811          common /iv/ anint
812          external sigreg
813          call sigreg(anint)
814          end
815    EOF
816        echo >> genmake_warnings
817        echo "running: check_HAVE_SIGREG()" >> genmake_warnings
818        cat genmake_tc_2.$FS >> genmake_warnings
819        COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
820        echo $COMM >> genmake_warnings
821        $COMM >> genmake_warnings 2>&1
822        RETVAL=$?
823        if test "x$RETVAL" = x0 ; then
824            HAVE_SIGREG=t
825            DEFINES="$DEFINES -DHAVE_SIGREG"
826        fi
827        rm -f genmake_tc*
828    }
829    
830    
831    check_HAVE_SETRLSTK()  {
832        if test "x$HAVE_SETRLSTK" = xt ; then
833            DEFINES="$DEFINES -DHAVE_SETRLSTK"
834            return
835        fi  
836        if test ! "x$HAVE_SETRLSTK" = x ; then
837            return
838        fi
839        get_fortran_c_namemangling
840        cat <<EOF > genmake_tc_1.c
841    $FC_NAMEMANGLE
842    #include <sys/time.h>
843    #include <sys/resource.h>
844    #include <unistd.h>
845    void FC_NAMEMANGLE(setrlstk) ()
846    {
847        struct rlimit rls;
848        rls.rlim_cur = RLIM_INFINITY;
849        rls.rlim_max = RLIM_INFINITY;
850        setrlimit(RLIMIT_STACK, &rls);
851        return;
852    }
853    EOF
854        make genmake_tc_1.o >> genmake_warnings 2>&1
855        RET_C=$?
856        cat <<EOF > genmake_tc_2.$FS
857          program hello
858          external setrlstk
859          call setrlstk()
860          end
861    EOF
862        echo >> genmake_warnings
863        echo "running: check_HAVE_SETRLSTK()" >> genmake_warnings
864        cat genmake_tc_2.$FS >> genmake_warnings
865        COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
866        echo $COMM >> genmake_warnings
867        $COMM >> genmake_warnings 2>&1
868        RETVAL=$?
869        if test "x$RETVAL" = x0 ; then
870            HAVE_SETRLSTK=t
871            DEFINES="$DEFINES -DHAVE_SETRLSTK"
872        fi
873        rm -f genmake_tc*
874    }
875    
876    
877    check_HAVE_STAT()  {
878        get_fortran_c_namemangling
879        cat <<EOF > genmake_tc_1.c
880    $FC_NAMEMANGLE
881    #include <stdio.h>
882    #include <stdlib.h>
883    #include <unistd.h>
884    #include <sys/stat.h>
885    #include <sys/types.h>
886    void FC_NAMEMANGLE(tfsize) ( int *nbyte )
887    {
888        char name[512];
889        struct stat astat;
890    
891        name[0] = 'a'; name[1] = '\0';
892        if (! stat(name, &astat))
893            *nbyte = (int)(astat.st_size);
894        else
895            *nbyte = -1;
896    }
897    EOF
898        make genmake_tc_1.o >> genmake_tc.log 2>&1
899        RET_C=$?
900        cat <<EOF > genmake_tc_2.$FS
901          program hello
902          integer nbyte
903          call tfsize(nbyte)
904          print *," HELLO WORLD", nbyte
905          end
906    EOF
907        echo >> genmake_warnings
908        echo "running: check_HAVE_STAT()" >> genmake_warnings
909        cat genmake_tc_2.$FS >> genmake_warnings
910        COMM="$FC $FFLAGS -o genmake_tc genmake_tc_2.$FS genmake_tc_1.o"
911        echo $COMM >> genmake_warnings
912        $COMM >> genmake_tc.log 2>&1
913        RETVAL=$?
914        if test "x$RETVAL" = x0 ; then
915            HAVE_STAT=t
916            DEFINES="$DEFINES -DHAVE_STAT"
917        fi
918        rm -f genmake_tc*
919    }
920    
921    
922  check_netcdf_libs()  {  check_netcdf_libs()  {
923      echo "" > genmake_tnc.log      if test ! "x$SKIP_NETCDF_CHECK" = x ; then
924      cat <<EOF > genmake_tnc.for          return
925        fi
926        echo >> genmake_warnings
927        echo "running: check_netcdf_libs()" >> genmake_warnings
928        cat <<EOF > genmake_tnc.F
929        program fgennc        program fgennc
930  #include "netcdf.inc"  #include "netcdf.inc"
931    EOF
932        if test ! "x$MPI" = x ; then
933            echo '#include "mpif.h"' >> genmake_tnc.F
934        fi
935        cat <<EOF >> genmake_tnc.F
936        integer iret, ncid, xid        integer iret, ncid, xid
937        iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)        iret = nf_create('genmake_tnc.nc', NF_CLOBBER, ncid)
938        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
# Line 689  check_netcdf_libs()  { Line 942  check_netcdf_libs()  {
942        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)        IF (iret .NE. NF_NOERR) write(*,*) NF_STRERROR(iret)
943        end        end
944  EOF  EOF
945      #echo "$CPP $DEFINES $INCLUDES"      echo "===  genmake_tnc.F  ===" > genmake_tnc.log
946      $CPP $DEFINES $INCLUDES genmake_tnc.for > genmake_tnc.f 2>/dev/null  \      cat genmake_tnc.F >> genmake_tnc.log
947          &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f $LIBS >> genmake_tnc.log 2>&1      echo "===  genmake_tnc.F  ===" >> genmake_tnc.log
948        RET_CPP=f
949        COMM="cat genmake_tnc.F | $CPP $DEFINES $INCLUDES"
950        echo "$COMM" >> genmake_tnc.log
951        eval $COMM > genmake_tnc.$FS 2>/dev/null  &&  RET_CPP=t
952        if test "x$RET_CPP" = xf ; then
953            echo "  WARNING: CPP failed to pre-process the netcdf test." \
954                >> genmake_tnc.log
955            echo "    Please check that \$INCLUDES is properly set." \
956                >> genmake_tnc.log
957        fi
958        echo "$FC $FFLAGS $FOPTIM -c genmake_tnc.$FS  \ " >> genmake_tnc.log
959        echo "  &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc.o $LIBS" >> genmake_tnc.log
960        $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
961            &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS >> genmake_tnc.log 2>&1
962      RET_COMPILE=$?      RET_COMPILE=$?
963      test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1      cat genmake_tnc.log >> genmake_warnings
964      RETVAL=$?  
965      if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then      #EH3  Remove test program execution for machines that either disallow
966        #EH3  execution or cannot support it (eg. cross-compilers)
967        #EH3
968        #EH3 test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1
969        #EH3 RETVAL=$?
970        #EH3 if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then
971    
972        if test "x$RET_COMPILE" = x0 ; then
973          HAVE_NETCDF=t          HAVE_NETCDF=t
974      else      else
975          # try again with "-lnetcdf" added to the libs          # try again with "-lnetcdf" added to the libs
976          $CPP $DEFINES $INCLUDES genmake_tnc.for > genmake_tnc.f 2>/dev/null  \          echo "try again with added '-lnetcdf'" > genmake_tnc.log
977              &&  $FC $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.f \          echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
978              $LIBS -lnetcdf >> genmake_tnc_2.log 2>&1          echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
979            echo " &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
980            cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null  \
981                &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
982                &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf >> genmake_tnc.log 2>&1
983          RET_COMPILE=$?          RET_COMPILE=$?
984          test -x ./genmake_tnc  &&  ./genmake_tnc >> genmake_tnc.log 2>&1          cat genmake_tnc.log >> genmake_warnings
985          RETVAL=$?          if test "x$RET_COMPILE" = x0 ; then
         if test "x$RET_COMPILE" = x0 -a "x$RETVAL" = x0 ; then  
986              LIBS="$LIBS -lnetcdf"              LIBS="$LIBS -lnetcdf"
987              HAVE_NETCDF=t              HAVE_NETCDF=t
988          else          else
989            # try again with "-lnetcdff" added to the libs
990                echo "try again with added '-lnetcdff -lnetcdf'" > genmake_tnc.log
991                echo "cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS \ " >> genmake_tnc.log
992                echo " &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS \ " >> genmake_tnc.log
993                echo " &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdf" >> genmake_tnc.log
994                cat genmake_tnc.F | $CPP $DEFINES $INCLUDES > genmake_tnc.$FS 2>/dev/null  \
995                    &&  $FC $FFLAGS $FOPTIM -c genmake_tnc.$FS >> genmake_tnc.log 2>&1  \
996                    &&  $LINK $FFLAGS $FOPTIM -o genmake_tnc genmake_tnc.o $LIBS -lnetcdff -lnetcdf >> genmake_tnc.log 2>&1
997                RET_COMPILE=$?
998              cat genmake_tnc.log >> genmake_warnings              cat genmake_tnc.log >> genmake_warnings
999                if test "x$RET_COMPILE" = x0 ; then
1000                    LIBS="$LIBS -lnetcdff -lnetcdf"
1001                    HAVE_NETCDF=t
1002                fi
1003          fi          fi
1004      fi      fi
1005      rm -f genmake_tnc*      rm -f genmake_tnc*
# Line 728  PLATFORM= Line 1018  PLATFORM=
1018  LN=  LN=
1019  S64=  S64=
1020  KPP=  KPP=
1021  FC=  #FC=
1022  CC=  #CC=gcc
1023  CPP=  #CPP=
1024  LINK=  LINK=
1025  DEFINES=  DEFINES=
1026  PACKAGES=  PACKAGES=
1027  ENABLE=  ENABLE=
1028  DISABLE=  DISABLE=
1029  MAKEFILE=  # MAKEFILE=
1030  #MAKEDEPEND=  # MAKEDEPEND=
1031  PDEPEND=  PDEPEND=
1032  DUMPSTATE=t  DUMPSTATE=t
1033  PDEFAULT=  PDEFAULT=
1034  OPTFILE=  OPTFILE=
1035  INCLUDES="-I."  INCLUDES="-I. $INCLUDES"
1036  FFLAGS=  FFLAGS=
1037  FOPTIM=  FOPTIM=
1038  CFLAGS=  CFLAGS=
# Line 755  NOOPTFILES= Line 1045  NOOPTFILES=
1045  NOOPTFLAGS=  NOOPTFLAGS=
1046  MPI=  MPI=
1047  MPIPATH=  MPIPATH=
1048    TS=
1049    PAPIS=
1050    PCLS=
1051    FOOLAD=
1052    PAPI=
1053    PCL=
1054    HPMT=
1055    GSL=
1056    DEVEL=
1057    HAVE_TEST_L=
1058    
1059  # DEFINES checked by test compilation  # DEFINES checked by test compilation or command-line
1060  HAVE_SYSTEM=  HAVE_SYSTEM=
1061  HAVE_FDATE=  HAVE_FDATE=
1062  FC_NAMEMANGLE=  FC_NAMEMANGLE=
1063  HAVE_CLOC=  HAVE_CLOC=
1064    # HAVE_SETRLSTK=
1065    HAVE_STAT=
1066  HAVE_NETCDF=  HAVE_NETCDF=
1067  HAVE_ETIME=  HAVE_ETIME=
1068    IGNORE_TIME=
1069    
1070  MODS=  MODS=
1071  TOOLSDIR=  TOOLSDIR=
# Line 773  STANDARDDIRS="USE_THE_DEFAULT" Line 1076  STANDARDDIRS="USE_THE_DEFAULT"
1076  G2ARGS=  G2ARGS=
1077  BASH=  BASH=
1078  PWD=`pwd`  PWD=`pwd`
1079  MAKE=make  test "x$MAKE" = x  &&  MAKE=make
1080  AWK=awk  test "x$AWK" = x   &&  AWK=awk
1081  THISHOSTNAME=`hostname`  EMBED_SRC=
1082    THISHOST=`hostname`
1083  THISCWD=`pwd`  THISCWD=`pwd`
1084  THISDATE=`date`  THISDATE=`date`
1085    THISUSER=`echo $USER`
1086    THISVER=
1087  MACHINE=`uname -a`  MACHINE=`uname -a`
1088  EXECUTABLE=  EXECUTABLE=
1089  EXEHOOK=  EXEHOOK=
# Line 806  TAMC_EXTRA= Line 1112  TAMC_EXTRA=
1112    
1113  #  The following state can be set directly by command-line switches  #  The following state can be set directly by command-line switches
1114  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"  gm_s1="OPTFILE PDEPEND PDEFAULT MAKEFILE PLATFORM ROOTDIR MODS DISABLE ENABLE"
1115  gm_s2="FC CPP IEEE MPI JAM DUMPSTATE STANDARDDIRS"  gm_s2="FC CPP IEEE TS PAPIS PCLS PAPI PCL HPMT GSL DEVEL MPI JAM DUMPSTATE STANDARDDIRS"
1116    
1117  #  The following state is not directly set by command-line switches  #  The following state is not directly set by command-line switches
1118  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "  gm_s3="LN S64 KPP LINK PACKAGES MAKEDEPEND PDEPEND PDEFAULT INCLUDES FFLAGS FOPTIM "
1119  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"  gm_s4="CFLAGS KFLAGS1 KFLAGS2 LIBS KPPFILES NOOPTFILES NOOPTFLAGS"
1120  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOSTNAME THISDATE MACHINE"  gm_s5="TOOLSDIR SOURCEDIRS INCLUDEDIRS PWD MAKE THISHOST THISUSER THISDATE THISVER MACHINE"
1121  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"  gm_s6="EXECUTABLE EXEHOOK EXEDIR PACKAGES_CONF"
1122  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"  gm_s7="HAVE_SYSTEM HAVE_FDATE FC_NAMEMANGLE HAVE_ETIME"
1123    
# Line 852  else Line 1158  else
1158      echo "none found"      echo "none found"
1159  fi  fi
1160    
1161  #  echo "$0::$1:$2:$3:$4:$5:$6:$7:"  #echo "$0::$1:$2:$3:$4:$5:$6:$7:"
1162  #OPTIONS=  #OPTIONS=
1163  #n=0  #n=0
1164  #for i ; do  #for i ; do
# Line 864  fi Line 1170  fi
1170  #done  #done
1171  #parse_options  #parse_options
1172  ac_prev=  ac_prev=
1173  for ac_option in $@ ; do  for ac_option in "$@" ; do
1174    
1175      G2ARGS="$G2ARGS \"$ac_option\""      G2ARGS="$G2ARGS \"$ac_option\""
1176    
# Line 986  for ac_option in $@ ; do Line 1292  for ac_option in $@ ; do
1292          -noieee | --noieee)          -noieee | --noieee)
1293              IEEE= ;;              IEEE= ;;
1294    
1295            -ts | --ts)
1296                TS=true ;;
1297            -papis | --papis)
1298                PAPIS=true ;;
1299            -pcls | --pcls)
1300                PCLS=true ;;
1301            -foolad | --foolad)
1302                FOOLAD=true ;;
1303            -papi | --papi)
1304                PAPI=true ;;
1305            -pcl | --pcl)
1306                PCL=true ;;
1307            -hpmt | --hpmt)
1308                HPMT=true ;;
1309    
1310            -gsl | --gsl)
1311                GSL=true ;;
1312    
1313            -devel | --devel)
1314                DEVEL=true ;;
1315    
1316          -mpi | --mpi)          -mpi | --mpi)
1317              MPI=true ;;              MPI=true ;;
1318          -mpi=* | --mpi=*)          -mpi=* | --mpi=*)
# Line 1009  for ac_option in $@ ; do Line 1336  for ac_option in $@ ; do
1336              ac_prev=TAMC_EXTRA ;;              ac_prev=TAMC_EXTRA ;;
1337          -tamc_extra=* | --tamc_extra=*)          -tamc_extra=* | --tamc_extra=*)
1338              TAMC_EXTRA=$ac_optarg ;;              TAMC_EXTRA=$ac_optarg ;;
1339            
1340            -ignoretime | -ignore_time | --ignoretime | --ignore_time)
1341                IGNORE_TIME="-DIGNORE_TIME" ;;
1342    
1343            -es | --es | -embed-source | --embed-source)
1344                EMBED_SRC=t ;;
1345    
1346          -*)          -*)
1347              echo "Error: unrecognized option: "$ac_option              echo "Error: unrecognized option: "$ac_option
# Line 1024  for ac_option in $@ ; do Line 1357  for ac_option in $@ ; do
1357            
1358  done  done
1359    
1360    
1361  if test -f ./.genmakerc ; then  if test -f ./.genmakerc ; then
1362      echo      echo
1363      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""      echo "WARNING: genmake2 has detected a copy of the old-style \"./.genmakerc\""
1364      echo "  file.  This file format is no longer supported.  Please see:"      echo "  file.  This file format is no longer supported.  For directions on"
1365      echo      echo "  how to setup and use the new \"genmake2\" script, please see:"
1366      echo "    http://mitgcm.org/devel_HOWTO/"      echo "    http://mitgcm.org/devel_HOWTO/"
1367      echo      echo "  and send an email to MITgcm-support@mitgcm.org if you need help."
1368      echo "  for directions on how to setup and use the new \"genmake2\" input"      echo "WARNING: ignore \"./.genmakerc\" and continue."
     echo "  files and send an email to MITgcm-support@mitgcm.org if you want help."  
1369      echo      echo
1370  fi  fi
1371    
1372    #  Find the MITgcm ${ROOTDIR}
1373  if test "x${ROOTDIR}" = x ; then  if test "x${ROOTDIR}" = x ; then
1374      tmp=`echo $PWD | sed -e 's/\// /g' | awk '{print $NR}'`      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1375      if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesup -a -d ../pkg ; then      if test "x$tmp" = "xbin" -a -d ../model -a -d ../eesupp -a -d ../pkg ; then
1376          ROOTDIR=".."          ROOTDIR=".."
1377      else      else
1378          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do          for d in . .. ../.. ../../.. ../../../.. ../../../../.. ; do
# Line 1062  if test ! -d ${ROOTDIR} ; then Line 1396  if test ! -d ${ROOTDIR} ; then
1396      exit 1      exit 1
1397  fi  fi
1398    
1399    #  Find the MITgcm ${THISVER}
1400    if test -f "${ROOTDIR}/doc/tag-index" ; then
1401        THISVER=`grep '^checkpoint' ${ROOTDIR}/doc/tag-index | head -1`
1402    fi
1403    
1404    if test "x$MAKEFILE" = x ; then
1405        MAKEFILE="Makefile"
1406    fi
1407    
1408  echo "  getting OPTFILE information:  "  echo "  getting OPTFILE information:  "
1409  if test "x${OPTFILE}" = x ; then  if test "x${OPTFILE}" = x ; then
1410      if test "x$MITGCM_OF" = x ; then      if test "x$MITGCM_OF" = x ; then
# Line 1091  if test "x$OPTFILE" != xNONE ; then Line 1434  if test "x$OPTFILE" != xNONE ; then
1434      fi      fi
1435  fi  fi
1436    
 #  Check for broken systems that cannot correctly distinguish *.F and *.f files  
 # check_for_broken_Ff  
   
1437  echo "  getting AD_OPTFILE information:  "  echo "  getting AD_OPTFILE information:  "
1438  if test "x${AD_OPTFILE}" = x ; then  if test "x${AD_OPTFILE}" = x ; then
1439      if test "x$MITGCM_AD_OF" = x ; then      if test "x$MITGCM_AD_OF" = x ; then
# Line 1121  if test "x${AD_OPTFILE}" != xNONE ; then Line 1461  if test "x${AD_OPTFILE}" != xNONE ; then
1461      fi      fi
1462  fi  fi
1463    
1464    #====================================================================
1465    #  Set default values if not set by the optfile
1466    #
1467  #  Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined.  If not,  #  Check that FC, CC, LINK, CPP, S64, LN, and MAKE are defined.  If not,
1468  #  either set defaults or complain and abort!  #  either set defaults or complain and abort!
1469  if test ! "x$BASH" = x ; then  if test ! "x$BASH" = x ; then
# Line 1138  EOF Line 1481  EOF
1481      exit 1      exit 1
1482  fi  fi
1483  if test "x$CC" = x ; then  if test "x$CC" = x ; then
1484      cat <<EOF 1>&2      CC=cc
1485    #     cat <<EOF 1>&2
1486  Error: no C compiler: please specify using one of the following:  # Error: no C compiler: please specify using one of the following:
1487    1) within the options file ("CC=...") as specified by "-of=OPTFILE"  #   1) within the options file ("CC=...") as specified by "-of=OPTFILE"
1488    2) the "-cc=XXX" command-line option  #   2) the "-cc=XXX" command-line option
1489    3) the "./genmake_local" file  #   3) the "./genmake_local" file
1490  EOF  # EOF
1491      exit 1  #     exit 1
1492  fi  fi
1493  if test "x$LINK" = x ; then  if test "x$LINK" = x ; then
1494      LINK=$FC      LINK=$FC
# Line 1197  Error: The command "ln -s" failed -- ple Line 1540  Error: The command "ln -s" failed -- ple
1540  EOF  EOF
1541      exit 1      exit 1
1542  fi  fi
1543    test -L genmake_tlink > /dev/null 2>&1
1544    RETVAL=$?
1545    if test "x$RETVAL" = x0 ; then
1546        HAVE_TEST_L=t
1547    fi
1548  rm -f genmake_test_ln genmake_tlink  rm -f genmake_test_ln genmake_tlink
1549    
1550  #  Check for broken *.F/*.f handling and fix if possible  #  Check for broken *.F/*.f handling and fix if possible
# Line 1207  if test ! "x$MPI" = x ; then Line 1555  if test ! "x$MPI" = x ; then
1555        DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"        DEFINES="$DEFINES -DALLOW_USE_MPI -DALWAYS_USE_MPI"
1556  fi  fi
1557    
1558    if test ! "x$TS" = x ; then
1559          echo "  Turning on timing per timestep"
1560          if test ! "x$FOOLAD" = x ; then
1561                DEFINES="$DEFINES -DTIME_PER_TIMESTEP_SFP"
1562          else
1563                DEFINES="$DEFINES -DTIME_PER_TIMESTEP"
1564          fi
1565    fi
1566    if test ! "x$PAPIS" = x ; then
1567          echo "  Turning on PAPI flop summary per timestep"
1568          echo "  Please make sure PAPIINC, PAPILIB are defined"
1569          if test ! "x$FOOLAD" = x ; then
1570                DEFINES="$DEFINES -DUSE_PAPI_FLOPS_SFP"
1571          else
1572                DEFINES="$DEFINES -DUSE_PAPI_FLOPS"
1573          fi
1574          INCLUDES="$INCLUDES $PAPIINC"
1575          LIBS="$LIBS $PAPILIB"
1576    fi
1577    if test ! "x$PCLS" = x ; then
1578          echo "  Turning on PCL counter summary per timestep"
1579          echo "  Please make sure PCLINC, PCLLIB are defined"
1580          if test ! "x$FOOLAD" = x ; then
1581                DEFINES="$DEFINES -DUSE_PCL_FLOPS_SFP"
1582          else
1583                DEFINES="$DEFINES -DUSE_PCL_FLOPS"
1584          fi
1585          INCLUDES="$INCLUDES $PCLINC"
1586          LIBS="$LIBS $PCLLIB"
1587    fi
1588    if test ! "x$PAPI" = x ; then
1589          if test ! "x$PAPIS" = x ; then
1590              echo "  PAPI performance analysis and flop summary per timestep cannot co-exist!"
1591              echo "  Sticking with PAPI flop summary per timestep!"
1592          else
1593              echo "  Turning on performance analysis with PAPI"
1594              echo "  Please make sure PAPIINC, PAPILIB are defined"
1595              DEFINES="$DEFINES -DUSE_PAPI"
1596              INCLUDES="$INCLUDES $PAPIINC"
1597              LIBS="$LIBS $PAPILIB"
1598          fi
1599    fi
1600    if test ! "x$PCL" = x ; then
1601          if test ! "x$PCLS" = x ; then
1602              echo "  PCL performance analysis and flop summary per timestep cannot co-exist!"
1603              echo "  Sticking with PCL flop summary per timestep!"
1604          else
1605              echo "  Turning on performance analysis with PCL"
1606              echo "  Please make sure PCLINC, PCLLIB are defined"
1607              DEFINES="$DEFINES -DUSE_PCL"
1608              INCLUDES="$INCLUDES $PCLINC"
1609              LIBS="$LIBS $PCLLIB"
1610          fi
1611    fi
1612    if test ! "x$HPMT" = x ; then
1613          if test ! "x$PAPI" = x ; then
1614              echo "  PAPI and the HPM Toolkit cannot co-exist!"
1615              echo "  Sticking with PAPI!"
1616          else if test ! "x$PCL" = x ; then
1617              echo "  PCL and the HPM Toolkit cannot co-exist!"
1618              echo "  Sticking with PCL!"
1619          else
1620              echo "  Turning on performance analysis with the HPM Toolkit"
1621              echo "  Please make sure HPMTINC, HPMTLIB are defined"
1622              DEFINES="$DEFINES -DUSE_LIBHPM"
1623              INCLUDES="$INCLUDES $HPMTINC"
1624              LIBS="$LIBS $HPMTLIB"
1625          fi
1626          fi
1627    fi
1628    if test ! "x$GSL" = x ; then
1629          echo "  Turning on use of GSL to control floating point calculations"
1630          echo "  Please make sure GSLINC, GSLLIB are defined"
1631          DEFINES="$DEFINES -DUSE_GSL_IEEE"
1632          INCLUDES="$INCLUDES $GSLINC"
1633          LIBS="$LIBS $GSLLIB"
1634    fi
1635    
1636  printf "\n===  Checking system libraries  ===\n"  printf "\n===  Checking system libraries  ===\n"
1637  printf "  Do we have the system() command using $FC...  "  printf "  Do we have the system() command using $FC...  "
1638  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1639        program hello        program hello
1640        call system('echo hi')        call system('echo hi')
1641        end        end
1642  EOF  EOF
1643  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1644  RETVAL=$?  RETVAL=$?
1645  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1646      HAVE_SYSTEM=t      HAVE_SYSTEM=t
# Line 1227  fi Line 1653  fi
1653  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1654    
1655  printf "  Do we have the fdate() command using $FC...  "  printf "  Do we have the fdate() command using $FC...  "
1656  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1657        program hello        program hello
1658        CHARACTER(128) string        CHARACTER*(128) string
1659        string = ' '        string = ' '
1660        call fdate( string )        call fdate( string )
1661        print *, string        print *, string
1662        end        end
1663  EOF  EOF
1664  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1665  RETVAL=$?  RETVAL=$?
1666  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1667      HAVE_FDATE=t      HAVE_FDATE=t
# Line 1248  fi Line 1674  fi
1674  rm -f genmake_tcomp*  rm -f genmake_tcomp*
1675    
1676  printf "  Do we have the etime() command using $FC...  "  printf "  Do we have the etime() command using $FC...  "
1677  cat > genmake_tcomp.f <<EOF  cat > genmake_tcomp.$FS <<EOF
1678        program hello        program hello
1679        REAL*4 ACTUAL, TARRAY(2)        REAL*4 ACTUAL, TARRAY(2)
1680        EXTERNAL ETIME        EXTERNAL ETIME
# Line 1257  cat > genmake_tcomp.f <<EOF Line 1683  cat > genmake_tcomp.f <<EOF
1683        print *, tarray        print *, tarray
1684        end        end
1685  EOF  EOF
1686  $FC $FFLAGS $DEFINES -o genmake_tcomp genmake_tcomp.f > genmake_tcomp.log 2>&1  $FC $FFLAGS -o genmake_tcomp genmake_tcomp.$FS > genmake_tcomp.log 2>&1
1687  RETVAL=$?  RETVAL=$?
1688  if test "x$RETVAL" = x0 ; then  if test "x$RETVAL" = x0 ; then
1689      HAVE_ETIME=t      HAVE_ETIME=t
# Line 1275  if test "x$HAVE_CLOC" != x ; then Line 1701  if test "x$HAVE_CLOC" != x ; then
1701      echo "yes"      echo "yes"
1702  else  else
1703      echo "no"      echo "no"
1704        if test "x$EMBED_SRC" = xt ; then
1705            echo "    WARNING: you requested file embedding but it has"
1706            echo "      been disabled since C code cannot be called"
1707            EMBED_SRC=
1708        fi
1709    fi
1710    rm -f genmake_t*
1711    
1712    printf "  Can we unlimit the stack size using $FC...  "
1713    check_HAVE_SETRLSTK
1714    if test "x$HAVE_SETRLSTK" = xt ; then
1715        echo "yes"
1716    else
1717        echo "no"
1718    fi
1719    rm -f genmake_t*
1720    
1721    printf "  Can we register a signal handler using $FC...  "
1722    check_HAVE_SIGREG
1723    if test "x$HAVE_SIGREG" = xt ; then
1724        echo "yes"
1725    else
1726        echo "no"
1727    fi
1728    rm -f genmake_t*
1729    
1730    printf "  Can we use stat() through C calls...  "
1731    check_HAVE_STAT
1732    if test "x$HAVE_STAT" != x ; then
1733        echo "yes"
1734    else
1735        echo "no"
1736  fi  fi
1737  rm -f genmake_t*  rm -f genmake_t*
1738    
# Line 1285  if test "x$HAVE_NETCDF" != x ; then Line 1743  if test "x$HAVE_NETCDF" != x ; then
1743  else  else
1744      echo "no"      echo "no"
1745  fi  fi
1746    DEFINES="$DEFINES $IGNORE_TIME"
1747    
1748    if test "x$EMBED_SRC" = xt ; then
1749        build_embed_encode
1750    fi
1751    if test "x$EMBED_SRC" = xt ; then
1752        ENABLE="$ENABLE embed_files"
1753    fi
1754    
1755    
1756  printf "\n===  Setting defaults  ===\n"  printf "\n===  Setting defaults  ===\n"
# Line 1302  for d in $MODS ; do Line 1768  for d in $MODS ; do
1768  done  done
1769  echo  echo
1770    
 if test "x$MAKEFILE" = x ; then  
     MAKEFILE="Makefile"  
 fi  
1771  if test "x${PLATFORM}" = x ; then  if test "x${PLATFORM}" = x ; then
1772      PLATFORM=$p_PLATFORM      PLATFORM=$p_PLATFORM
1773  fi  fi
1774    
1775  if test "x${EXEDIR}" = x ; then  if test "x${EXEDIR}" = x ; then
1776      tmp=`echo $PWD | sed -e 's/\// /g' | awk '{print $NR}'`      tmp=`echo $PWD | sed -e 's/\// /g' | $AWK '{print $NR}'`
1777      if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then      if test "x$tmp" = "xbin" -a -d ../exe -a $ROOTDIR = .. ; then
1778          EXEDIR=../exe          EXEDIR=../exe
1779      else      else
# Line 1330  if test ! -d ${TOOLSDIR} ; then Line 1793  if test ! -d ${TOOLSDIR} ; then
1793      exit 1      exit 1
1794  fi  fi
1795  if test "x$S64" = x ; then  if test "x$S64" = x ; then
1796      S64='$(TOOLSDIR)/set64bitConst.sh'      echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.sh > /dev/null 2>&1
1797        RETVAL=$?
1798        if test "x${RETVAL}" = x0 ; then
1799            S64='$(TOOLSDIR)/set64bitConst.sh'
1800        else
1801            echo "3.0 _d 3" | ${TOOLSDIR}/set64bitConst.csh > /dev/null 2>&1
1802            RETVAL=$?
1803            if test "x${RETVAL}" = x0 ; then
1804                S64='$(TOOLSDIR)/set64bitConst.csh'
1805            else
1806                cat <<EOF
1807    
1808    ERROR: neither of the two default scripts:
1809    
1810        ${TOOLSDIR}/set64bitConst.sh
1811        ${TOOLSDIR}/set64bitConst.csh
1812    
1813      are working so please check paths or specify (with \$S64) a
1814      working version of this script.
1815    
1816    EOF
1817                exit 1
1818            fi
1819        fi
1820  fi  fi
1821  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`  THIS_SCRIPT=`echo ${0} | sed 's:'$TOOLSDIR':\$(TOOLSDIR):'`
1822    
# Line 1352  if test -r $ROOTDIR"/eesupp/src/Makefile Line 1838  if test -r $ROOTDIR"/eesupp/src/Makefile
1838      fi      fi
1839  fi  fi
1840    
1841  #same for exch2  #same for pkg/exch2 and pkg/regrid
1842  if test -r $ROOTDIR"/pkg/exch2/Makefile" ; then  for pdir in exch2 regrid ; do
1843      echo "  Making source files in exch2 from  templates"      if test -r $ROOTDIR"/pkg/${pdir}/Makefile" ; then
1844      ( cd $ROOTDIR"/pkg/exch2/" && $MAKE ) > make_exch2.errors 2>&1          echo "  Making source files in pkg/${pdir} from templates"
1845      RETVAL=$?          ( cd $ROOTDIR"/pkg/"${pdir} && $MAKE ) > make_${pdir}.errors 2>&1
1846      if test "x${RETVAL}" = x0 ; then          RETVAL=$?
1847          rm -f make_exch2.errors          if test "x${RETVAL}" = x0 ; then
1848      else              rm -f make_${pdir}.errors
1849          echo "Error: problem encountered while building source files in exch2:"          else
1850          cat make_exch2.errors 1>&2              echo "Error: problem encountered while building source files in pkg/${pdir}:"
1851          exit 1              cat make_${pdir}.errors 1>&2
1852                exit 1
1853            fi
1854      fi      fi
1855  fi  done
1856    
1857  printf "\n===  Determining package settings  ===\n"  printf "\n===  Determining package settings  ===\n"
1858  if  test "x${PDEPEND}" = x ; then  if  test "x${PDEPEND}" = x ; then
# Line 1475  done Line 1963  done
1963  rm -f ./.tmp_pack  rm -f ./.tmp_pack
1964  echo "    packages are:  $PACKAGES"  echo "    packages are:  $PACKAGES"
1965    
1966    #  Check for package MNC: if NetCDF is available, then build the MNC
1967    #  template files ; otherwise, delete mnc from the list of packages.
1968    echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1
1969    RETVAL=$?
1970    if test "x$RETVAL" = x0 ; then
1971        if test "x$HAVE_NETCDF" != xt ; then
1972            cat <<EOF
1973    
1974    *********************************************************************
1975    WARNING: the "mnc" package was enabled but tests failed to compile
1976      NetCDF applications.  Please check that:
1977    
1978      1) NetCDF is correctly installed for this compiler and
1979      2) the LIBS variable (within the "optfile") specifies the correct
1980           NetCDF library to link against.
1981    
1982      Due to this failure, the "mnc" package is now DISABLED.
1983    *********************************************************************
1984    
1985    EOF
1986            PACKAGES=`echo $PACKAGES | sed -e 's/mnc//g'`
1987            DISABLE="$DISABLE mnc"
1988        else
1989            ( cd $ROOTDIR"/pkg/mnc" && $MAKE testclean && $MAKE templates ) > make_mnc.errors 2>&1
1990            RETVAL=$?
1991            if test "x${RETVAL}" = x0 ; then
1992                rm -f make_mnc.errors
1993            else
1994                echo "Error: problem encountered while building source files in pkg/mnc:"
1995                cat make_mnc.errors 1>&2
1996                exit 1
1997            fi
1998        fi
1999    fi
2000    
2001    #  Check for package PROFILES: if NetCDF is not available,
2002    #  then delete profiles from the list of available packages.
2003    echo $PACKAGES | grep ' profiles ' > /dev/null 2>&1
2004    RETVAL=$?
2005    if test "x$RETVAL" = x0 ; then
2006        if test "x$HAVE_NETCDF" != xt ; then
2007            cat <<EOF
2008    
2009    *********************************************************************
2010    WARNING: the "profiles" package was enabled but tests failed to
2011      compile NetCDF applications.  Please check that:
2012    
2013      1) NetCDF is correctly installed for this compiler and
2014      2) the LIBS variable (within the "optfile") specifies the correct
2015           NetCDF library to link against.
2016    
2017      Due to this failure, the "profiles" package is now DISABLED.
2018    *********************************************************************
2019    
2020    EOF
2021            PACKAGES=`echo $PACKAGES | sed -e 's/profiles//g'`
2022            DISABLE="$DISABLE profiles"
2023        fi
2024    fi
2025    
2026  echo "  applying package dependency rules"  echo "  applying package dependency rules"
2027  ck=  ck=
2028  while test "x$ck" != xtt ; do  while test "x$ck" != xtt ; do
# Line 1559  for i in $PACKAGES ; do Line 2107  for i in $PACKAGES ; do
2107      fi      fi
2108  done  done
2109    
 #  Build MNC templates and check for ability to build and use NetCDF  
 echo $PACKAGES | grep ' mnc ' > /dev/null 2>&1  
 RETVAL=$?  
 if test "x$RETVAL" = x0 ; then  
     ( cd $ROOTDIR"/pkg/mnc" && $MAKE templates ) > make_mnc.errors 2>&1  
     RETVAL=$?  
     if test "x${RETVAL}" = x0 ; then  
         rm -f make_mnc.errors  
     else  
         echo "Error: problem encountered while building source files in pkg/mnc:"  
         cat make_mnc.errors 1>&2  
         exit 1  
     fi  
     if test "x$HAVE_NETCDF" != xt ; then  
         cat <<EOF  
   
 WARNING: the "mnc" package has been enabled but tests failed to  
   compile and/or execute NetCDF applications.  Please check that:  
   
   1) NetCDF is installed for your compiler and  
   2) the LIBS variable (within the 'optfile") specifies the correct  
        NetCDF library to link against.  
     
 EOF  
     fi  
 fi  
   
2110  # Create a list of #define and #undef to enable/disable packages  # Create a list of #define and #undef to enable/disable packages
2111  PACKAGES_DOT_H=PACKAGES_CONFIG.h  PACKAGES_DOT_H=PACKAGES_CONFIG.h
2112  #  The following UGLY HACK sets multiple "#undef"s and it needs to go  #  The following UGLY HACK sets multiple "#undef"s and it needs to go
# Line 1605  for n in $names ; do Line 2126  for n in $names ; do
2126              fi              fi
2127          done          done
2128          if test "x$has_pack" = xf ; then          if test "x$has_pack" = xf ; then
2129              undef=`echo "ALLOW_$n" | $AWK '{print toupper($0)}'`              undef=`echo "ALLOW_$n" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2130              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"              DISABLED_PACKAGES="$DISABLED_PACKAGES -U$undef"
2131          fi          fi
2132      fi      fi
2133  done  done
2134  ENABLED_PACKAGES=  ENABLED_PACKAGES=
2135  for i in $PACKAGES ; do  for i in $PACKAGES ; do
2136      def=`echo "ALLOW_$i" | $AWK '{print toupper($0)}'`      def=`echo "ALLOW_$i" | sed -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
2137      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"      ENABLED_PACKAGES="$ENABLED_PACKAGES -D$def"
2138  #eh3 DEFINES="$DEFINES -D$def"  #eh3 DEFINES="$DEFINES -D$def"
2139    
# Line 1696  for i in $SOURCEDIRS ; do Line 2217  for i in $SOURCEDIRS ; do
2217          cat $i/$j >> ad_files          cat $i/$j >> ad_files
2218      done      done
2219  done  done
2220    if test ! "x"$FS = "x.f" ; then
2221        cat ad_files | sed -e "s/\.f/.$FS/g" > ad_files_f
2222        mv -f ad_files_f ad_files
2223    fi
2224    
2225  echo  echo
2226  echo "===  Creating the Makefile  ==="  echo "===  Creating the Makefile  ==="
# Line 1707  for i in $INCLUDEDIRS ; do Line 2231  for i in $INCLUDEDIRS ; do
2231      fi      fi
2232  done  done
2233    
2234    if test ! "x$DIVA" = x ; then
2235        echo "  Creating the pseudo-MPI include directory"
2236        INCLUDES="-I./mpi_headers $INCLUDES"
2237        rm -rf ./mpi_headers
2238        mkdir -p ./mpi_headers
2239    
2240        if test "x$MPIINCLUDEDIR" = x ; then
2241            if test "x$MPIHOME" = x ; then
2242                MPIHOME='/usr'
2243            fi
2244            MPIINCLUDEDIR='$MPIHOME/include'
2245        fi
2246        
2247        if test -r $MPIINCLUDEDIR/mpif.h ; then
2248            for i in $MPI_HEADER_FILES; do
2249                cp -p $MPIINCLUDEDIR/$i ./mpi_headers
2250            done
2251    
2252            perl -i -pe 's/MPI_DISPLACEMENT_CURRENT=-1_8/MPI_DISPLACEMENT_CURRENT=-1/g' mpi_headers/mpif.h
2253        else
2254            echo " We cannot create a copy of mpif.h!"
2255    #       exit -1
2256        fi
2257    fi
2258    
2259  echo "  Determining the list of source and include files"  echo "  Determining the list of source and include files"
2260  rm -rf .links.tmp  rm -rf .links.tmp
2261  mkdir .links.tmp  mkdir .links.tmp
2262    touch .links.tmp/foo
2263    if test ! -r ".links.tmp/foo" ; then
2264        echo
2265        echo "ERROR : something is wrong with your directory permissions or"
2266        echo "   your user file-creation mask (\"umask\") since creating a"
2267        echo "   sub-dir, touch-ing a file within it, and then reading it is"
2268        echo "   not working.  Please try setting your umask to something"
2269        echo "   sane such as:"
2270        echo
2271        echo "      umask 0002"
2272        echo
2273        echo "   and please verify that you have the proper permissions for"
2274        echo "   creating sub-directories and then reading files created"
2275        echo "   within them."
2276        echo
2277        exit 1
2278    fi
2279    rm -f .links.tmp/foo
2280  echo "# This section creates symbolic links" > srclinks.tmp  echo "# This section creates symbolic links" > srclinks.tmp
2281  echo "" >> srclinks.tmp  echo "" >> srclinks.tmp
2282  printf 'SRCFILES = '    > srclist.inc  printf 'SRCFILES = '    > srclist.inc
# Line 1725  for d in $alldirs ; do Line 2292  for d in $alldirs ; do
2292      for sf in $sfiles ; do      for sf in $sfiles ; do
2293          if test ! -r ".links.tmp/$sf" ; then          if test ! -r ".links.tmp/$sf" ; then
2294              if test -f "$d/$sf" ; then              if test -f "$d/$sf" ; then
2295                    ignore_f=f
2296                  case $d/$sf in                  case $d/$sf in
2297                    ./$PACKAGES_DOT_H)                    ./$PACKAGES_DOT_H)
2298                            ignore_f=t
2299                          ;;                          ;;
2300                    ./AD_CONFIG.h)                    ./AD_CONFIG.h)
2301                            ignore_f=t
2302                          ;;                          ;;
2303                    ./FC_NAMEMANGLE.h)                    ./FC_NAMEMANGLE.h)
2304                            ignore_f=t
2305                          ;;                          ;;
2306                    *)                    ./BUILD_INFO.h)
2307                          touch .links.tmp/$sf                          ignore_f=t
                         deplist="$deplist $sf"  
                         ;;  
                 esac  
                 extn=`echo $sf | $AWK -F '.' '{print $NF}'`  
                 case $extn in  
                     F)  
                         echo    " \\"  >> srclist.inc  
                         printf " $sf" >> srclist.inc  
                         ;;  
                     F90)  
                         echo    " \\"  >> f90srclist.inc  
                         printf " $sf" >> f90srclist.inc  
                         ;;  
                     c)  
                         echo    " \\"  >> csrclist.inc  
                         printf " $sf" >> csrclist.inc  
2308                          ;;                          ;;
2309                      h)                    ./EMBEDDED_FILES.h)
2310                          echo    " \\"  >> hlist.inc                          ignore_f=t
                         printf " $sf" >> hlist.inc  
2311                          ;;                          ;;
2312                      flow)                    *)
2313                          echo    " \\"  >> ad_flow_files.inc                          #  For the local directory *ONLY*,
2314                          printf " $sf" >> ad_flow_files.inc                          #  ignore all soft-links
2315                            if test "x$HAVE_TEST_L" = xt -a "x$d" = x. -a -L $sf ; then
2316                                ignore_f=t
2317                            else
2318                                touch .links.tmp/$sf
2319                                deplist="$deplist $sf"
2320                            fi
2321                          ;;                          ;;
2322                  esac                  esac
2323                    if test "x$ignore_f" = xf ; then
2324                        extn=`echo $sf | $AWK -F. '{print $NF}'`
2325                        case $extn in
2326                            F)
2327                                echo    " \\"  >> srclist.inc
2328                                printf " $sf" >> srclist.inc
2329                                ;;
2330                            F90)
2331                                echo    " \\"  >> f90srclist.inc
2332                                printf " $sf" >> f90srclist.inc
2333                                ;;
2334                            c)
2335                                echo    " \\"  >> csrclist.inc
2336                                printf " $sf" >> csrclist.inc
2337                                ;;
2338                            h)
2339                                echo    " \\"  >> hlist.inc
2340                                printf " $sf" >> hlist.inc
2341                                ;;
2342                            flow)
2343                                echo    " \\"  >> ad_flow_files.inc
2344                                printf " $sf" >> ad_flow_files.inc
2345                                ;;
2346                        esac
2347                    fi
2348              fi              fi
2349          fi          fi
2350      done      done
# Line 1788  echo "#    $THISDATE" >> $MAKEFILE Line 2373  echo "#    $THISDATE" >> $MAKEFILE
2373  echo "# by the command:" >> $MAKEFILE  echo "# by the command:" >> $MAKEFILE
2374  echo "#    $0 $G2ARGS" >> $MAKEFILE  echo "#    $0 $G2ARGS" >> $MAKEFILE
2375  echo "# executed by:" >> $MAKEFILE  echo "# executed by:" >> $MAKEFILE
2376  echo "#    $USER@${THISHOSTNAME}:${THISCWD}" >> $MAKEFILE  echo "#    ${THISUSER}@${THISHOST}:${THISCWD}" >> $MAKEFILE
2377    
2378  EXE_AD=$EXECUTABLE"_ad"  EXE_AD=$EXECUTABLE"_ad"
2379  EXE_FTL=$EXECUTABLE"_ftl"  EXE_FTL=$EXECUTABLE"_ftl"
# Line 1834  ENABLED_PACKAGES = ${ENABLED_PACKAGES} Line 2419  ENABLED_PACKAGES = ${ENABLED_PACKAGES}
2419  DISABLED_PACKAGES = ${DISABLED_PACKAGES}  DISABLED_PACKAGES = ${DISABLED_PACKAGES}
2420    
2421  # These files are created by Makefile  # These files are created by Makefile
2422  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h  SPECIAL_FILES = ${PACKAGES_DOT_H} AD_CONFIG.h FC_NAMEMANGLE.h BUILD_INFO.h
   
2423  EOF  EOF
2424    
2425  #  Note: figure out some way to add Hyades JAM libraries here  if test "x$EMBED_SRC" = xt ; then
2426        echo "EMBEDDED_FILES = EMBEDDED_FILES.h" >>$MAKEFILE
2427    else
2428        echo "EMBEDDED_FILES = " >>$MAKEFILE
2429    fi
2430    
2431    #  Note: figure out some way to add Hyades JAM libraries here
2432  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2433  # Unix ln (link)  # Unix ln (link)
2434  LN = ${LN}  LN = ${LN}
# Line 1850  MAKEDEPEND = ${MAKEDEPEND} Line 2439  MAKEDEPEND = ${MAKEDEPEND}
2439  # Special preprocessor (KAP on DECs, FPP on Crays)  # Special preprocessor (KAP on DECs, FPP on Crays)
2440  KPP = ${KPP}  KPP = ${KPP}
2441  # Fortran compiler  # Fortran compiler
2442  FC = ${FC} in  FC = ${FC}
2443  # Fortran compiler  # Fortran compiler
2444  F90C = ${F90C}  F90C = ${F90C}
2445  # C compiler  # C compiler
# Line 1877  CFLAGS = ${CFLAGS} Line 2466  CFLAGS = ${CFLAGS}
2466  NOOPTFILES = ${NOOPTFILES}  NOOPTFILES = ${NOOPTFILES}
2467  NOOPTFLAGS = ${NOOPTFLAGS}  NOOPTFLAGS = ${NOOPTFLAGS}
2468  # Flags and libraries needed for linking  # Flags and libraries needed for linking
2469  LIBS = ${LIBS} \$(XLIBS)  LIBS = ${LIBS}
2470  # Name of the Mekfile  # Name of the Mekfile
2471  MAKEFILE=${MAKEFILE}  MAKEFILE=${MAKEFILE}
2472    
# Line 1890  cat hlist.inc         >> $MAKEFILE Line 2479  cat hlist.inc         >> $MAKEFILE
2479  cat ad_flow_files.inc >> $MAKEFILE  cat ad_flow_files.inc >> $MAKEFILE
2480  echo >> $MAKEFILE  echo >> $MAKEFILE
2481  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE  echo 'F77FILES =  $(SRCFILES:.F=.'$FS')'      >> $MAKEFILE
2482  echo 'F90FILES =  $(F90SRCFILES:.F=.'$FS90')' >> $MAKEFILE  echo 'F90FILES =  $(F90SRCFILES:.F90=.'$FS90')' >> $MAKEFILE
2483  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE  echo 'OBJFILES =  $(SRCFILES:.F=.o) $(CSRCFILES:.c=.o) $(F90SRCFILES:.F90=.o)' >> $MAKEFILE
2484  echo >> $MAKEFILE  echo >> $MAKEFILE
2485  echo '.SUFFIXES:' >> $MAKEFILE  echo '.SUFFIXES:' >> $MAKEFILE
# Line 1901  rm -f ad_flow_files.inc Line 2490  rm -f ad_flow_files.inc
2490  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2491    
2492  all: \$(EXECUTABLE)  all: \$(EXECUTABLE)
2493  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES)  \$(EXECUTABLE): \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(OBJFILES) \$(EMBEDDED_FILES)
2494          @echo Creating \$@ ...          @echo Creating \$@ ...
2495          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)          \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
2496  depend:  depend:
# Line 1910  depend: Line 2499  depend:
2499          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
2500          -rm -f makedepend.out          -rm -f makedepend.out
2501    
2502    lib: libmitgcmuv.a
2503    
2504    libmitgcmuv.a: \$(OBJFILES)
2505            ar rcv libmitgcmuv.a \$(OBJFILES)
2506            ar d   libmitgcmuv.a main.o
2507    
2508  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)  links: \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(SPECIAL_FILES)
2509    
2510  small_f: \$(F77FILES) \$(F90FILES)  small_f: \$(F77FILES) \$(F90FILES)
# Line 1919  output.txt: \$(EXECUTABLE) Line 2514  output.txt: \$(EXECUTABLE)
2514          @\$(EXECUTABLE) > \$@          @\$(EXECUTABLE) > \$@
2515    
2516  clean:  clean:
2517          -rm -rf *.o *.$FS *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template          -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
2518            -rm -rf *.o
2519            -rm -rf *.$FS
2520  Clean:  Clean:
2521          @make clean          @make clean
2522          @make cleanlinks          @make cleanlinks
# Line 1930  CLEAN: Line 2527  CLEAN:
2527          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;          -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
2528          -find \$(EXEDIR) -name "*.data" -exec rm {} \;          -find \$(EXEDIR) -name "*.data" -exec rm {} \;
2529          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;          -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
2530          -rm -f \$(EXECUTABLE) output.txt STD*          -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
2531            -rm -rf mnc_test_*
2532    
2533  #eh3 Makefile: makefile  #eh3 Makefile: makefile
2534  makefile:  makefile:
# Line 1938  makefile: Line 2536  makefile:
2536  cleanlinks:  cleanlinks:
2537          -find . -type l -exec rm {} \;          -find . -type l -exec rm {} \;
2538    
2539  # Special targets ($SPECIAL_FILES) which are create by make  # Special targets (SPECIAL_FILES) which are create by make
2540  ${PACKAGES_DOT_H}:  ${PACKAGES_DOT_H}:
2541          @echo Creating \$@ ...          @echo Creating \$@ ...
2542          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -bPACKAGES_CONFIG_H "Disabled packages:" \$(DISABLED_PACKAGES) " " "Enabled packages:" \$(ENABLED_PACKAGES) > \$@
# Line 1949  FC_NAMEMANGLE.h: Line 2547  FC_NAMEMANGLE.h:
2547          @echo Creating \$@ ...          @echo Creating \$@ ...
2548          echo "$FC_NAMEMANGLE" > \$@          echo "$FC_NAMEMANGLE" > \$@
2549    
2550    BUILD_INFO.h:
2551            @echo Creating \$@ ...
2552    EOF
2553    
2554    test ! "x$THISVER" = x  && echo "       -echo \"#define THISVER '$THISVER'\" > \$@"   >> $MAKEFILE
2555    test ! "x$THISUSER" = x && echo "       -echo \"#define THISUSER '$THISUSER'\" >> \$@" >> $MAKEFILE
2556    test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
2557    test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
2558    
2559    if test "x$EMBED_SRC" = xt ; then
2560        cat >>$MAKEFILE <<EOF
2561    
2562    decode_files.o : EMBEDDED_FILES.h
2563    
2564    ##  \$(F77FILES)
2565    all_fF.tar.gz : \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2566            @echo Creating \$@ ...
2567            -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(SRCFILES) \$(CSRCFILES) \$(HEADERFILES) \$(F90SRCFILES) \$(F77FILES) Makefile
2568            -rm -f all_fF.tar.gz
2569            -gzip all_fF.tar
2570    
2571    EMBEDDED_FILES.h : all_fF.tar.gz
2572            @echo Creating \$@ ...
2573            -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
2574    
2575    EOF
2576    fi
2577    
2578    cat >>$MAKEFILE <<EOF
2579    
2580  # The normal chain of rules is (  .F - .$FS - .o  )  # The normal chain of rules is (  .F - .$FS - .o  )
2581    
2582  %.o : %.F  ## This nullifies any default implicit rules concerning these two file types:
2583    ## %.o : %.F
2584    
2585  .F.$FS:  .F.$FS:
2586          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@          \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
2587  .$FS.o:  .$FS.o:
2588          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<          \$(FC) \$(FFLAGS) \$(FOPTIM) -c \$<
2589  .F90.$FS90:  .F90.o:  
         \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@  
 .$FS90.o:  
2590          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$<
2591  .c.o:  .c.o:
2592          \$(CC) \$(CFLAGS) -c \$<          \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
2593    
2594  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
2595  .F.p:  .F.p:
# Line 1986  ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF Line 2613  ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF
2613  ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"  ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
2614  for i in $ad_vars ; do  for i in $ad_vars ; do
2615      name=$i      name=$i
2616      t1="t2=\$"`echo $i`      t1="t2=\$"`echo "$i"`
2617      eval $t1      eval $t1
2618      printf "%-20s = " $name >> $MAKEFILE      printf "%-20s = " $name >> $MAKEFILE
2619      echo $t2 >> $MAKEFILE      echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
2620  done  done
2621    
2622  echo "  Add the source list for AD code generation"  echo "  Add the source list for AD code generation"
# Line 2006  rm -f ad_files Line 2633  rm -f ad_files
2633  cat >>$MAKEFILE <<EOF  cat >>$MAKEFILE <<EOF
2634    
2635  # ... AD ...  # ... AD ...
2636  adall: ad_taf  adall: \$(EXE_AD)
2637  adtaf: ad_taf_output.f  adtaf: ad_taf_output.$FS
2638  adtamc: ad_tamc_output.f  adtamc: ad_tamc_output.$FS
2639    
2640  ad_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ad_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2641          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
2642          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h          cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
2643          -rm -f ad_config.template          -rm -f ad_config.template
2644          @make \$(F77FILES)          @make \$(F77FILES)
2645          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
2646          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ad_input_code.$FS
2647    
2648  ad_taf_output.f: ad_input_code.f  ad_taf_output.$FS: ad_input_code.$FS
2649          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2650          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2651    
2652  adtafonly:  adtafonly:
2653          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.f          \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
2654          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
2655    
2656  ad_taf: ad_taf_output.o \$(OBJFILES)  \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
2657          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)          \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
2658    
2659  ad_tamc_output.f: ad_input_code.f  ad_tamc_output.$FS: ad_input_code.$FS
2660          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.f          \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
2661          cat ad_input_code_ad.f | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.f          cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
2662    
2663  ad_tamc: ad_tamc_output.o \$(OBJFILES)  ad_tamc: ad_tamc_output.o \$(OBJFILES)
2664          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
2665    
2666    adonlyfwd:
2667            patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
2668    
2669    adtrick:
2670            patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
2671    
2672  # ... FTL ...  # ... FTL ...
2673  ftlall: ftl_taf  ftlall: ftl_taf
2674  ftltaf: ftl_taf_output.f  ftltaf: ftl_taf_output.$FS
2675  ftltamc: ftl_tamc_output.f  ftltamc: ftl_tamc_output.$FS
2676    
2677  ftl_input_code.f: \$(AD_FILES) \$(HEADERFILES)  ftl_input_code.$FS: \$(AD_FILES) \$(HEADERFILES)
2678          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template          @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2679          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h          cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2680          -rm -f ftl_config.template          -rm -f ftl_config.template
2681          @make \$(F77FILES)          @make \$(F77FILES)
2682          @make \$(AD_FLOW_FILES)          @make \$(AD_FLOW_FILES)
2683          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.f          cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
2684    
2685  ftl_taf_output.f: ftl_input_code.f  ftl_taf_output.$FS: ftl_input_code.$FS
2686          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2687          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2688    
2689  ftltafonly:  ftltafonly:
2690          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.f          \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
2691          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
2692    
2693  ftl_taf: ftl_taf_output.o \$(OBJFILES)  ftl_taf: ftl_taf_output.o \$(OBJFILES)
2694          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
2695    
2696  ftl_tamc_output.f: ftl_input_code.f  ftl_tamc_output.$FS: ftl_input_code.$FS
2697          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.f          \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
2698          cat ftl_input_code_ftl.f | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.f          cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
2699    
2700  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)  ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
2701          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)          \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
2702    
2703    
2704  # ... SVD ...  # ... SVD ...
2705  svdtaf: ad_taf_output.f ftl_taf_output.f  svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
2706  svdall: svd_taf          @echo "--->>> Only ran TAF to generate SVD code!    <<<---"
2707            @echo "--->>> Do make svdall afterwards to compile. <<<---"
2708    svdall: svd_touch svd_taf
2709    
2710  svd_taf: ad_taf_output.o ftl_taf_output.o \$(OBJFILES)  svd_taf: \$(OBJFILES)
2711          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)          \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
2712    
2713            @echo "--->>> Only COMPILE svd code! <<<---"
2714            @echo "--->>> Assumes you previously <<<---"
2715            @echo "--->>> did make svdtaf        <<<---"
2716    
2717    svd_touch:
2718            @echo "--->>> Only COMPILE svd code! <<<---"
2719            @echo "--->>> Assumes you previously <<<---"
2720            @echo "--->>> did make svdtaf        <<<---"
2721            touch ad_taf_output.$FS ftl_taf_output.$FS
2722            \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
2723            \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
2724            @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
2725            cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
2726            -rm -f ftl_config.template
2727    
2728  #=========================================  #=========================================
2729    

Legend:
Removed from v.1.92  
changed lines
  Added in v.1.161

  ViewVC Help
Powered by ViewVC 1.1.22